Citrus Sinensis ID: 011647
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 480 | 2.2.26 [Sep-21-2011] | |||||||
| Q42479 | 529 | Calcium-dependent protein | yes | no | 0.841 | 0.763 | 0.809 | 0.0 | |
| Q9FMP5 | 528 | Calcium-dependent protein | no | no | 0.870 | 0.791 | 0.728 | 0.0 | |
| Q3E9C0 | 523 | Calcium-dependent protein | no | no | 0.872 | 0.801 | 0.726 | 0.0 | |
| P53683 | 533 | Calcium-dependent protein | no | no | 0.937 | 0.844 | 0.655 | 0.0 | |
| P49101 | 513 | Calcium-dependent protein | N/A | no | 0.885 | 0.828 | 0.675 | 1e-180 | |
| Q38868 | 541 | Calcium-dependent protein | no | no | 0.95 | 0.842 | 0.623 | 1e-180 | |
| Q9C6P3 | 521 | Calcium-dependent protein | no | no | 0.877 | 0.808 | 0.696 | 1e-179 | |
| P28582 | 532 | Calcium-dependent protein | N/A | no | 0.835 | 0.753 | 0.699 | 1e-175 | |
| Q9ZSA2 | 531 | Calcium-dependent protein | no | no | 0.864 | 0.781 | 0.681 | 1e-173 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.837 | 0.725 | 0.679 | 1e-171 |
| >sp|Q42479|CDPK3_ARATH Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/405 (80%), Positives = 376/405 (92%)
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
GR+LG+PME+VR TY FGRELGRGQFGVTYLVTHK+TKQQ ACKSI +R+L+++DD+EDV
Sbjct: 64 GRILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDV 123
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLC 174
RREVQIMHHL+GHRNIV+LKGAYEDRHSVNLIM+LC GGELFDRII+KG YSERAAA+LC
Sbjct: 124 RREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLC 183
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
RQMV VVH CHSMGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGD FKDLVGSA
Sbjct: 184 RQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSA 243
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
YYVAPEVL+RNYG EADIWSAGVILYILLSGVPPFWGE E IFDAIL+G +DFS+DPWP
Sbjct: 244 YYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSADPWP 303
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
+S AKD+V+KML DPK+RL+AAEVLNHPW+R DG+ASDKPLD AVL+RMKQFRAMNK
Sbjct: 304 ALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMNK 363
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
LKK+ALKVIAENLSEEEI+GLKEMFKS+DTDN+G +T EEL+ GLPKLG+++SE+E+RQL
Sbjct: 364 LKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQL 423
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
MEAAD+DG+G+IDY+EFI+ATMHMNR+ERE+HLY AF++FD DNS
Sbjct: 424 MEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNS 468
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May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion-and Ca(2+)-permeable channels and stomatal closure. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/424 (72%), Positives = 364/424 (85%), Gaps = 6/424 (1%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PP PP + +G VLG+PMEDV+ +Y G+ELGRGQFGVT+L T K T QF
Sbjct: 46 PPSPP------PATKQGPIGPVLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQF 99
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
ACK+I+ RKL+N++D+EDVRREVQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGEL
Sbjct: 100 ACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGEL 159
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
FDRIIAKGHYSERAAA+L R +V +VH CHSMGV+HRDLKPENFL + E+SPLKATDF
Sbjct: 160 FDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDF 219
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
GLSVF+KPG+VFKD+VGSAYY+APEVL+R YG EADIWS GV+LYILL GVPPFW E+E
Sbjct: 220 GLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESEN 279
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
IF+AILRGH+DFSSDPWP+IS AKD+VKKML++DPK+RL+AA+VLNHPW++ DG+A D
Sbjct: 280 GIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPD 339
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
PLD AV++R+KQF+AMN KKVAL+VIA LSEEEIMGLKEMFK MDTD+SGTIT EEL
Sbjct: 340 VPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEEL 399
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+ GL K GTRLSE EV+QLMEAAD DGNGTIDY EFI ATMH+NR++REEHLY AF++FD
Sbjct: 400 RQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFD 459
Query: 456 KDNS 459
KDNS
Sbjct: 460 KDNS 463
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/424 (72%), Positives = 363/424 (85%), Gaps = 5/424 (1%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PP P P++ +G VLG+PMEDV+++Y G+ELGRGQFGVT+L T K T QF
Sbjct: 40 PPASPPPATK-----QGPIGPVLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQF 94
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
ACK+I+ RKL+N++D+EDVRREVQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGEL
Sbjct: 95 ACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGEL 154
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
FDRIIAKGHYSERAAA+L R +V ++H CHSMGV+HRDLKPENFL S E+SPLKATDF
Sbjct: 155 FDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDF 214
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
GLSVF+KPG+VFKD+VGSAYY+APEVLRR YG EADIWS GV+LYILL GVPPFW E+E
Sbjct: 215 GLSVFYKPGEVFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESEN 274
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
IF+AIL G +DFSSDPWP IS AKD+V+KML++DPK+RL+AA+VLNHPW++ DG+A D
Sbjct: 275 GIFNAILSGQVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPD 334
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
PLD AV++R+KQF+AMN KKVAL+VIA LSEEEIMGLKEMFK MDTDNSGTIT EEL
Sbjct: 335 VPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEEL 394
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+ GL K GTRLSE EV+QLMEAAD DGNGTIDY EFI ATMH+NR++REEHLY AF++FD
Sbjct: 395 RQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFD 454
Query: 456 KDNS 459
KDNS
Sbjct: 455 KDNS 458
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53683|CDPK2_ORYSJ Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/467 (65%), Positives = 375/467 (80%), Gaps = 17/467 (3%)
Query: 2 GNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGR----- 56
G NG S H T T +HP + PP R + SA +
Sbjct: 16 GGANGYGYS----HQTKPAQTTPSYNHP---QPPPPAEVRYTPSAMNPPVVPPVVAPPKP 68
Query: 57 ----VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE 112
+LGKP +DVR+ Y G+ELGRGQFGVTYL T + +Q+ACKSIS RKL+++ D E
Sbjct: 69 TPDTILGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKE 128
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN 172
D+RRE+QIM HL+G +NIVE +GAYED+ +V+++M+LCAGGELFDRIIAKGHYSERAAA
Sbjct: 129 DIRREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAAT 188
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+CR +V VV+ CH MGVMHRDLKPENFL ++ E++ LKATDFGLSVF + G +++D+VG
Sbjct: 189 ICRAVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVFIEEGKMYRDIVG 248
Query: 233 SAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
SAYYVAPEVLRRNYG E D+WSAGVILYILLSGVPPFW ETE+ IFDAIL+G IDF S P
Sbjct: 249 SAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFESQP 308
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352
WP+IS SAKD+V+KML DPK+R+++A+VL HPW+R DG+ASDKP+D AVL+RMKQFRAM
Sbjct: 309 WPSISESAKDLVRKMLTQDPKKRITSAQVLQHPWLR-DGEASDKPIDSAVLSRMKQFRAM 367
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
NKLKK+ALKVIA NL+EEEI GLK+MF +MDTDNSGTIT+EELKAGL KLG++LSE+EV+
Sbjct: 368 NKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVK 427
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
QLMEAADVDGNG+IDY+EFITATMH +++ER+EHL+KAF+YFDKDNS
Sbjct: 428 QLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNS 474
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May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 630 bits (1625), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/437 (67%), Positives = 360/437 (82%), Gaps = 12/437 (2%)
Query: 35 DPPGPPRPSSSATSATSSS------------VGRVLGKPMEDVRNTYIFGRELGRGQFGV 82
+PP SAT+SS +LGK EDVR+ Y FG+ELGRGQFGV
Sbjct: 19 NPPQQAAEVRYTPSATNSSAVPPVAVPPKPTADTILGKQYEDVRSVYSFGKELGRGQFGV 78
Query: 83 TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142
TYL T + +Q+ACKSIS RKL+++ D ED+RRE+QIM HL+G NIVE +GAYED+ +
Sbjct: 79 TYLCTEIASGRQYACKSISKRKLVSKADREDIRREIQIMQHLSGQPNIVEFRGAYEDKSN 138
Query: 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202
V+++M+LCAGGELFDRIIAKGHY+ERAAA +CR +V VV+ CH MGVMHRDLKPENFL +
Sbjct: 139 VHVVMELCAGGELFDRIIAKGHYTERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLA 198
Query: 203 SSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYIL 262
+ E++ LKATDFGLSVF + G +++D+VGSAYYVAPEVLRR+YG E D+WSAGVILYIL
Sbjct: 199 TMEENAMLKATDFGLSVFIEEGKMYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYIL 258
Query: 263 LSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
LSGVPPFW E E+ IFDAIL IDF S PWP+IS SAKD+V+KML DPK+RL++A+VL
Sbjct: 259 LSGVPPFWAEIEKGIFDAILHEEIDFESQPWPSISESAKDLVRKMLTRDPKKRLTSAQVL 318
Query: 323 NHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSM 382
H W+R G+ASDKP+D AVL+RMKQFRAMNKLKK+ALKVIA NL+EEEI GLK+MF +M
Sbjct: 319 QHQWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNM 378
Query: 383 DTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442
DTDNSGTIT+EELKAGL KLG++LSE+EV+QLMEAADVDGNG+IDY+EFITATMH +++E
Sbjct: 379 DTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLE 438
Query: 443 REEHLYKAFEYFDKDNS 459
R+EHL+KAF+YFDKDNS
Sbjct: 439 RDEHLFKAFQYFDKDNS 455
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Zea mays (taxid: 4577) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 630 bits (1625), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/484 (62%), Positives = 367/484 (75%), Gaps = 28/484 (5%)
Query: 1 MGNC------------NGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSA-- 46
MGNC NG + ++ T DP P + P P P +S
Sbjct: 1 MGNCFAKNHGLMKPQQNGNTTRSVEVGVTNQDP---PSYTPQARTTQQPEKPGSVNSQPP 57
Query: 47 -----------TSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
+ T++ +L EDV+ Y G+ELGRGQFGVTYL T T +++
Sbjct: 58 PWRAAAAAPGLSPKTTTKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKY 117
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
ACKSIS +KL+ + D +D+RRE+QIM HL+G NIVE KGAYED +VNL+M+LCAGGEL
Sbjct: 118 ACKSISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGEL 177
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
FDRIIAKGHY+ERAAA++CRQ+V VV CH MGV+HRDLKPENFL SS E + +KATDF
Sbjct: 178 FDRIIAKGHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDF 237
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
GLSVF + G V++D+VGSAYYVAPEVLRR YG E DIWSAG+ILYILLSGVPPFW ETE+
Sbjct: 238 GLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEK 297
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
IFDAIL GHIDF S PWP+ISSSAKD+V++ML ADPK R+SAA+VL HPW+R G+ASD
Sbjct: 298 GIFDAILEGHIDFESQPWPSISSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASD 357
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
KP+D AVL+RMKQFRAMNKLKK+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EEL
Sbjct: 358 KPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEEL 417
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
K GL KLG++L+E+EV+QLM+AADVDGNG+IDYIEFITATMH +R+E E+LYKAF++FD
Sbjct: 418 KEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFD 477
Query: 456 KDNS 459
KD+S
Sbjct: 478 KDSS 481
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/422 (69%), Positives = 349/422 (82%)
Query: 38 GPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFAC 97
G +P A S +L KP EDV+ Y +ELGRGQFGVTYL T K T ++FAC
Sbjct: 42 GTNQPPPWRNPAKHSGAAAILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFAC 101
Query: 98 KSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD 157
KSIS +KL+ + D ED+RRE+QIM HL+G NIVE KGAYED +VNL+M+LCAGGELFD
Sbjct: 102 KSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFD 161
Query: 158 RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
RI+AKGHYSERAAA++CRQ+V VV+ CH MGVMHRDLKPENFL SS E + +KATDFGL
Sbjct: 162 RILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGL 221
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
SVF + G V+KD+VGSAYYVAPEVL+R YG E DIWSAG+ILYILLSGVPPFW ETE+ I
Sbjct: 222 SVFIEEGRVYKDIVGSAYYVAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGI 281
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
FDAIL G IDF S PWP+IS+SAKD+V++ML DPK R+SAAEVL HPW+R G+ASDKP
Sbjct: 282 FDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKP 341
Query: 338 LDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
+D AVL+RMKQFRAMNKLKK+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EELK
Sbjct: 342 IDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKE 401
Query: 398 GLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKD 457
GL KLG+RL+E+EV+QLM+AADVDGNG+IDYIEFITATMH +R+E E++YKAF++FDKD
Sbjct: 402 GLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKD 461
Query: 458 NS 459
S
Sbjct: 462 GS 463
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2 | Back alignment and function description |
|---|
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 282/403 (69%), Positives = 344/403 (85%), Gaps = 2/403 (0%)
Query: 57 VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
+LGKP ED+R Y G+ELGRGQFG Y T + Q +ACKSI RKL++++D ED++R
Sbjct: 69 ILGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSKNDKEDIKR 128
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
E+QI+ HL+G NIVE KG +EDR SV+L+M+LCAGGELFDRIIA+GHYSERAAA +CRQ
Sbjct: 129 EIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGELFDRIIAQGHYSERAAATICRQ 188
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
+V VVH CH MGVMHRDLKPENFL SS +D+ LKATDFGLSVF + G V++++VGSAYY
Sbjct: 189 IVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLKATDFGLSVFIEEGKVYRNIVGSAYY 248
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
VAPEVLRR+YG E DIWSAGVILYILLSGVPPFW E E+ IFDAIL G IDF S+PWP++
Sbjct: 249 VAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILEGVIDFESEPWPSV 308
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
S+SAKD+V+KML DP+ R+++A+VL+HPWMR G+ASDKP+D AVL+RMKQFRAMNKLK
Sbjct: 309 SNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLK 368
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
++ALKVIAE+LSEEEI GLK MF +MDTD SGTIT+EELK+GL +LG++LSE EV+QLM+
Sbjct: 369 QLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMD 428
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
AADVDGNGTIDY+EFITATMH +++E EH +AF+YFDKDNS
Sbjct: 429 AADVDGNGTIDYLEFITATMHRHKLESYEH--QAFQYFDKDNS 469
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 608 bits (1568), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/418 (68%), Positives = 347/418 (83%), Gaps = 3/418 (0%)
Query: 42 PSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS 101
PSS+ S +LGKP ED+R Y G+ELGRGQFG+TY+ T +ACKSI
Sbjct: 55 PSSNPVSVRDPDT--ILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSIL 112
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
RKLI++ D EDV+RE+QIM +L+G NIVE+KGAYEDR S++L+M+LCAGGELFDRIIA
Sbjct: 113 KRKLISKQDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIA 172
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
+GHYSERAAA + R +V VV CH MGV+HRDLKPENFL SS E++ LKATDFGLSVF
Sbjct: 173 QGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFI 232
Query: 222 KPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281
+ G V++D+VGSAYYVAPEVLRR+YG E DIWSAGVILYILLSGVPPFW E E+ IFD +
Sbjct: 233 EEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEV 292
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
++G IDF S+PWP+IS SAKD+V+KML DPK R++AA+VL HPW++ G+A DKP+D A
Sbjct: 293 IKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEAPDKPIDSA 351
Query: 342 VLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
VL+RMKQFRAMNKLKK+ALKVIAE+LSEEEI GLK MF ++DTD SGTIT+EELK GL +
Sbjct: 352 VLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTR 411
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
LG+RLSE+EV+QLMEAADVDGNGTIDY EFI+ATMH +++R+EH+YKAF++FDKDNS
Sbjct: 412 LGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNS 469
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 274/403 (67%), Positives = 338/403 (83%), Gaps = 1/403 (0%)
Query: 57 VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
+LGKP E++R Y G+ELGRGQFG+TY T +ACKSI RKL + D++DV+R
Sbjct: 90 ILGKPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKR 149
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
E+QIM +L+G NIVE+KGAYEDR S++L+M+LC G ELFDRIIA+GHYSE+AAA + R
Sbjct: 150 EIQIMQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAAAGVIRS 209
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
++ VV CH MGV+HRDLKPENFL +S+ E++ LKATDFGLSVF + G V++D+VGSAYY
Sbjct: 210 VLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAYY 269
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
VAPEVLRR+YG E DIWSAG+ILYILL GVPPFW ETE+ IF+ I++G IDF S PWP+I
Sbjct: 270 VAPEVLRRSYGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPSI 329
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
S SAKD+V+K+L DPK+R+SAA+ L HPW+R G+A DKP+D AVL+RMKQFRAMNKLK
Sbjct: 330 SESAKDLVRKLLTKDPKQRISAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLK 388
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K+ALKVIAE+LSEEEI GLK MF +MDTD SGTIT+EELK GL KLG++L+E+EV+QLME
Sbjct: 389 KLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLME 448
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
AADVDGNGTIDYIEFI+ATMH R +R+EH++KAF+YFDKDNS
Sbjct: 449 AADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNS 491
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 480 | ||||||
| 224053829 | 515 | calcium dependent protein kinase 3 [Popu | 0.943 | 0.879 | 0.839 | 0.0 | |
| 224075036 | 520 | calcium dependent protein kinase 22 [Pop | 0.943 | 0.871 | 0.851 | 0.0 | |
| 225426094 | 528 | PREDICTED: calcium-dependent protein kin | 0.952 | 0.865 | 0.827 | 0.0 | |
| 255537639 | 528 | calcium-dependent protein kinase, putati | 0.868 | 0.789 | 0.892 | 0.0 | |
| 356497285 | 505 | PREDICTED: calcium-dependent protein kin | 0.962 | 0.914 | 0.797 | 0.0 | |
| 356513317 | 518 | PREDICTED: calcium-dependent protein kin | 0.970 | 0.899 | 0.788 | 0.0 | |
| 356539541 | 505 | PREDICTED: calcium-dependent protein kin | 0.962 | 0.914 | 0.795 | 0.0 | |
| 147814808 | 482 | hypothetical protein VITISV_032639 [Viti | 0.841 | 0.838 | 0.898 | 0.0 | |
| 356513319 | 532 | PREDICTED: calcium-dependent protein kin | 0.970 | 0.875 | 0.766 | 0.0 | |
| 114804153 | 514 | CDPK1 [Ipomoea nil] gi|397746248|gb|AFO6 | 0.927 | 0.865 | 0.792 | 0.0 |
| >gi|224053829|ref|XP_002298000.1| calcium dependent protein kinase 3 [Populus trichocarpa] gi|222845258|gb|EEE82805.1| calcium dependent protein kinase 3 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/460 (83%), Positives = 416/460 (90%), Gaps = 7/460 (1%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPP-GPPRPSSSATSATSSSVGRVLG 59
MGNCN L SS + + P + G+K+ PP P P S +S++VGRVLG
Sbjct: 1 MGNCNSLASSSSTTTNHRNPPPSN-----GGIKVLPPNASPPPRSQFLHHSSAAVGRVLG 55
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
+PMEDVRNTY FGRE+GRGQFGVTYLVTHK+TKQ FACKSI+ RKLINRDD+EDV REVQ
Sbjct: 56 RPMEDVRNTYTFGREVGRGQFGVTYLVTHKETKQHFACKSIAKRKLINRDDIEDVLREVQ 115
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
IMHHLTGHRN+VELKGAYEDRHSVNLIM+LC GGELFDRII KGHYSERAAANLCRQ+VT
Sbjct: 116 IMHHLTGHRNVVELKGAYEDRHSVNLIMELCEGGELFDRIITKGHYSERAAANLCRQIVT 175
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
VVH CH+MGV+HRDLKPENFLF S+ EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP
Sbjct: 176 VVHNCHTMGVIHRDLKPENFLFLSTHEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 235
Query: 240 EVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
EVLRRNYGAE DIWSAGVILYILLSGVPPFWGETEQ+IFD+ILRGHIDFSSDPWP+ISSS
Sbjct: 236 EVLRRNYGAEVDIWSAGVILYILLSGVPPFWGETEQAIFDSILRGHIDFSSDPWPSISSS 295
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVA 359
AKD+VK+ML ADPKER+SA EVLNHPWMR DG ASDKPLDIAVLTRMKQFRAMNKLKK+A
Sbjct: 296 AKDLVKQMLRADPKERISAVEVLNHPWMREDG-ASDKPLDIAVLTRMKQFRAMNKLKKIA 354
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
LKVIAENLSEEEIMGLKEMFKSMDTDN+GTITFEELKAGLPKLGT+LSESEVRQLMEAAD
Sbjct: 355 LKVIAENLSEEEIMGLKEMFKSMDTDNNGTITFEELKAGLPKLGTKLSESEVRQLMEAAD 414
Query: 420 VDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
VDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD S
Sbjct: 415 VDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKS 454
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075036|ref|XP_002304529.1| calcium dependent protein kinase 22 [Populus trichocarpa] gi|222841961|gb|EEE79508.1| calcium dependent protein kinase 22 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/465 (85%), Positives = 424/465 (91%), Gaps = 12/465 (2%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNG-LKIDPPG---PPRPSSSATSATS--SSV 54
MGNCN LPSS + +TT D P PNG +K+ PP PPR S+ S ++V
Sbjct: 1 MGNCNSLPSSSST--TTTTDHHNTP---PNGVIKVLPPTATPPPRSQHHHHSSASGSTAV 55
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
GRVLG+P EDVRNTYIFGRELGRGQFGVTYLVTHK+TKQ FACKSI+SRKLINRDD+EDV
Sbjct: 56 GRVLGRPREDVRNTYIFGRELGRGQFGVTYLVTHKETKQHFACKSIASRKLINRDDIEDV 115
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLC 174
RREVQIMHHLTGHRNIVELKGAYED+HSVNLIM+LC GGELFDRIIAKGHYSERAAANLC
Sbjct: 116 RREVQIMHHLTGHRNIVELKGAYEDQHSVNLIMELCEGGELFDRIIAKGHYSERAAANLC 175
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
RQ+VTVVH CH+MGV+HRDLKPENFLF S+ EDSPLKATDFGLSVFFKPGDVFKDLVGSA
Sbjct: 176 RQIVTVVHNCHTMGVIHRDLKPENFLFLSTHEDSPLKATDFGLSVFFKPGDVFKDLVGSA 235
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
YYVAPEVLRRNYGAE DIWSAGVILYILLSGVPPFWG+TEQ IFD+ILRGHIDFSSDPWP
Sbjct: 236 YYVAPEVLRRNYGAEVDIWSAGVILYILLSGVPPFWGDTEQVIFDSILRGHIDFSSDPWP 295
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
+ISSSAKD+VK+M+ ADPKER+SA EVLNHPWMR DG ASDKPLDIAVLTRMKQFRAMNK
Sbjct: 296 SISSSAKDLVKQMVRADPKERISAVEVLNHPWMREDG-ASDKPLDIAVLTRMKQFRAMNK 354
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
LKKVALKVIAENLSEEEIMGLKEMFKSMDTDN+GTITFEELKAGLPKLGT+LSESEVRQL
Sbjct: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNNGTITFEELKAGLPKLGTKLSESEVRQL 414
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
MEAADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD S
Sbjct: 415 MEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKS 459
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426094|ref|XP_002272270.1| PREDICTED: calcium-dependent protein kinase 3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/469 (82%), Positives = 420/469 (89%), Gaps = 12/469 (2%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGP-----GHHPNGLKIDPPGPPRPSSSATSATS---- 51
MGNCNGLPS TQ A D G H NGL + PP P P T+A
Sbjct: 1 MGNCNGLPSGDTQFQ-INAGRDGGVRPSSHAHSSNGLNVRPPSPSPPPPPRTAAPVVHRP 59
Query: 52 -SSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD 110
+ GRVLG+PMEDVR TYIFGRELGRGQFGVTYLVTHK+TK+QFACKSI++RKL+NRDD
Sbjct: 60 LAGNGRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDD 119
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
+EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRIIAKGHYSERAA
Sbjct: 120 IEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAA 179
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
A LCRQ+VTVVH CH+MGVMHRDLKPENFLF S+AEDSPLKATDFGLSVFFKPGDVFKDL
Sbjct: 180 AALCRQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDL 239
Query: 231 VGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290
VGSAYYVAPEVLRR+YGAEADIWSAGVIL+ILLSGVPPFWGE EQSIFD ILRGHIDFSS
Sbjct: 240 VGSAYYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSS 299
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
DPWP+IS+SAKD+VKKML ADPKERL+A +VLNHPWM+ DG ASDKP+DIAVLTR+KQFR
Sbjct: 300 DPWPSISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDG-ASDKPIDIAVLTRVKQFR 358
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
AMNKLKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTIT+EELK GLPKLGT+LSESE
Sbjct: 359 AMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESE 418
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
VRQLMEAADVDGNGTIDYIEFI+ATMHMNR+ERE+HLY+AFEYFDKD S
Sbjct: 419 VRQLMEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKS 467
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255537639|ref|XP_002509886.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223549785|gb|EEF51273.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/417 (89%), Positives = 400/417 (95%)
Query: 43 SSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS 102
S++ SA ++VGRVLG+PMEDVR+ Y FGRELGRGQFGVTYLVTHK+TKQQFACKSI++
Sbjct: 51 SNNRPSAAPAAVGRVLGRPMEDVRSIYAFGRELGRGQFGVTYLVTHKETKQQFACKSIAT 110
Query: 103 RKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK 162
RKLINRDD+EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRIIAK
Sbjct: 111 RKLINRDDIEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAK 170
Query: 163 GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
GHYSERAAANLCRQ+VTVVH CHSMGV+HRDLKPENFLF S+ E+SPLKATDFGLSVFFK
Sbjct: 171 GHYSERAAANLCRQIVTVVHDCHSMGVIHRDLKPENFLFLSTDENSPLKATDFGLSVFFK 230
Query: 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
PGD FKDLVGSAYYVAPEVLRRNYG DIWSAGVILYILLSGVPPFWGETEQ+IFD +L
Sbjct: 231 PGDTFKDLVGSAYYVAPEVLRRNYGPAIDIWSAGVILYILLSGVPPFWGETEQAIFDTVL 290
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAV 342
RGHIDFSSDPWP+ISSSAKD+VKKML AD K+R+SAAEVLNHPWMRVDGDASDKPLDIAV
Sbjct: 291 RGHIDFSSDPWPSISSSAKDLVKKMLTADAKDRISAAEVLNHPWMRVDGDASDKPLDIAV 350
Query: 343 LTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402
LTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDN+GTIT+EELKAGLPKL
Sbjct: 351 LTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNNGTITYEELKAGLPKL 410
Query: 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
GT+LSESEV+QLMEAADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD S
Sbjct: 411 GTKLSESEVKQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKS 467
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497285|ref|XP_003517491.1| PREDICTED: calcium-dependent protein kinase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/485 (79%), Positives = 420/485 (86%), Gaps = 23/485 (4%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGK 60
MGNCN SSQTQ HS D P + NG+ + PP + SVGRVLG+
Sbjct: 1 MGNCNSEASSQTQPHS---DHHPQPRSNSNGITVLPPN-----------SKPSVGRVLGR 46
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
PMEDVR+TY FGRELGRGQFGVTYLVTHK TKQQFACKSI++ KL++RDD+EDVRREVQI
Sbjct: 47 PMEDVRSTYTFGRELGRGQFGVTYLVTHKHTKQQFACKSIATPKLVHRDDLEDVRREVQI 106
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
MHHLTGHRNIVELKGAYEDRHSVNLIM+LC GGELFDRIIAKGHYSERAAA+LCRQ+VTV
Sbjct: 107 MHHLTGHRNIVELKGAYEDRHSVNLIMELCGGGELFDRIIAKGHYSERAAADLCRQIVTV 166
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
VH CH+MGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE
Sbjct: 167 VHDCHTMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 226
Query: 241 VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
VLRR+YG EADIWSAGVIL+ILLSGVPPFW + EQ IFDAILRGHIDF+SDPWP+ISSSA
Sbjct: 227 VLRRSYGPEADIWSAGVILFILLSGVPPFWSKKEQGIFDAILRGHIDFTSDPWPSISSSA 286
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
KD+VKKML ADPK+RLSA EVL+HPWMR DG ASDKPLD+AVL+RMKQFRAMNKLKKVAL
Sbjct: 287 KDLVKKMLRADPKQRLSAVEVLDHPWMREDG-ASDKPLDVAVLSRMKQFRAMNKLKKVAL 345
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
KVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPKLGT++SESEVRQLMEAADV
Sbjct: 346 KVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAADV 405
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS--------TSQWKSWNMRLRS 472
DGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD S S K +NM
Sbjct: 406 DGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITMEELESTLKKYNMGDEK 465
Query: 473 IIWEM 477
I E+
Sbjct: 466 TIKEI 470
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513317|ref|XP_003525360.1| PREDICTED: calcium-dependent protein kinase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/492 (78%), Positives = 422/492 (85%), Gaps = 26/492 (5%)
Query: 1 MGNCN---GLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGP----PRPSSSATSATSSS 53
MGNC+ G P++ + H H NG+ + PP P TS++SSS
Sbjct: 1 MGNCSSGAGAPTTYSDDHP-----------HHNGITVLPPNSNPSPQLPKPPPTSSSSSS 49
Query: 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED 113
+GRVLG+PMEDVR+ YIFGRELGRGQFGVTYLVTHK TK+QFACKSI++RKL+NRDD++D
Sbjct: 50 LGRVLGRPMEDVRSIYIFGRELGRGQFGVTYLVTHKATKEQFACKSIATRKLVNRDDIDD 109
Query: 114 VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
+RREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRII KGHYSERAAAN
Sbjct: 110 IRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANS 169
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
CRQ+VTVVH CHSMGVMHRDLKPENFL + +DSPLKATDFGLSVFFKPGDVF+DLVGS
Sbjct: 170 CRQIVTVVHNCHSMGVMHRDLKPENFLLLNKNDDSPLKATDFGLSVFFKPGDVFRDLVGS 229
Query: 234 AYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
AYYVAPEVLRR+YG EADIWSAGVILYILLSGVPPFW E EQ IFDAILRGHIDF+SDPW
Sbjct: 230 AYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPW 289
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMN 353
P+ISSSAKD+VKKML ADPKERLSA EVLNHPWMRVDGDA DKPLDIAVLTRMKQFRAMN
Sbjct: 290 PSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDAPDKPLDIAVLTRMKQFRAMN 349
Query: 354 KLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQ 413
KLKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPKLGT+LSESEVRQ
Sbjct: 350 KLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQ 409
Query: 414 LMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS--------TSQWKS 465
LMEAADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFD D S S K
Sbjct: 410 LMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDKSGYITMEELESALKK 469
Query: 466 WNMRLRSIIWEM 477
+NM I E+
Sbjct: 470 YNMGDEKTIKEI 481
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539541|ref|XP_003538256.1| PREDICTED: calcium-dependent protein kinase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/485 (79%), Positives = 416/485 (85%), Gaps = 23/485 (4%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGK 60
MGNCN PSSQTQ HS NG+ + PP + SVGRVLG+
Sbjct: 1 MGNCNSEPSSQTQPHSDHHHHHP---QPSNGITVLPPN-----------SKPSVGRVLGR 46
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
PMED R+TY FGRELGRGQFGVTY VTHK TKQQFACKSI++RKL++RDD+EDVRREVQI
Sbjct: 47 PMEDARSTYTFGRELGRGQFGVTYQVTHKHTKQQFACKSIATRKLVHRDDLEDVRREVQI 106
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
MHHLTGHRNIVELKGAYEDRHSVNLIM+LC GGELFDRIIAKGHYSERAAA+LCRQ+VTV
Sbjct: 107 MHHLTGHRNIVELKGAYEDRHSVNLIMELCGGGELFDRIIAKGHYSERAAADLCRQIVTV 166
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
VH CH+MGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE
Sbjct: 167 VHDCHTMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 226
Query: 241 VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
VLRR+YG ADIWSAGVIL+ILLSGVPPFW E EQ IFDAILRGHIDF+SDPWP+ISSSA
Sbjct: 227 VLRRSYGPGADIWSAGVILFILLSGVPPFWSEKEQGIFDAILRGHIDFASDPWPSISSSA 286
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
KD+VKKML ADPK+RLSA EVLNHPWMR DG ASDKPLD+AVL+RMKQFRAMNKLKKVAL
Sbjct: 287 KDLVKKMLRADPKQRLSAVEVLNHPWMREDG-ASDKPLDVAVLSRMKQFRAMNKLKKVAL 345
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
KVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPKLGT++SESEVRQLMEAADV
Sbjct: 346 KVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAADV 405
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS--------TSQWKSWNMRLRS 472
DGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD S S K +NM
Sbjct: 406 DGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITVEELESALKKYNMGDEK 465
Query: 473 IIWEM 477
I E+
Sbjct: 466 TIKEI 470
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147814808|emb|CAN61364.1| hypothetical protein VITISV_032639 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/405 (89%), Positives = 393/405 (97%), Gaps = 1/405 (0%)
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
GRVLG+PMEDVR TYIFGRELGRGQFGVTYLVTHK+TK+QFACKSI++RKL+NRDD+EDV
Sbjct: 18 GRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDDIEDV 77
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLC 174
RREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRIIAKGHYSERAAA LC
Sbjct: 78 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAAALC 137
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
RQ+VTVVH CH+MGVMHRDLKPENFLF S+AEDSPLKATDFGLSVFFKPGDVFKDLVGSA
Sbjct: 138 RQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 197
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
YYVAPEVLRR+YGAEADIWSAGVIL+ILLSGVPPFWGE EQSIFD ILRGHIDFSSDPWP
Sbjct: 198 YYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSSDPWP 257
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
+IS+SAKD+VKKML ADPKERL+A +VLNHPWM+ DG ASDKP+DIAVLTR+KQFRAMNK
Sbjct: 258 SISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDG-ASDKPIDIAVLTRVKQFRAMNK 316
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
LKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTIT+EELK GLPKLGT+LSESEVRQL
Sbjct: 317 LKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESEVRQL 376
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
MEAADVDGNGTIDYIEFI+ATMHMNR+ERE+HLY+AFEYFDKD S
Sbjct: 377 MEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKS 421
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513319|ref|XP_003525361.1| PREDICTED: calcium-dependent protein kinase 3-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/506 (76%), Positives = 422/506 (83%), Gaps = 40/506 (7%)
Query: 1 MGNCN---GLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGP----PRPSSSATSATSSS 53
MGNC+ G P++ + H H NG+ + PP P TS++SSS
Sbjct: 1 MGNCSSGAGAPTTYSDDHP-----------HHNGITVLPPNSNPSPQLPKPPPTSSSSSS 49
Query: 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED 113
+GRVLG+PMEDVR+ YIFGRELGRGQFGVTYLVTHK TK+QFACKSI++RKL+NRDD++D
Sbjct: 50 LGRVLGRPMEDVRSIYIFGRELGRGQFGVTYLVTHKATKEQFACKSIATRKLVNRDDIDD 109
Query: 114 VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
+RREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRII KGHYSERAAAN
Sbjct: 110 IRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANS 169
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
CRQ+VTVVH CHSMGVMHRDLKPENFL + +DSPLKATDFGLSVFFKPGDVF+DLVGS
Sbjct: 170 CRQIVTVVHNCHSMGVMHRDLKPENFLLLNKNDDSPLKATDFGLSVFFKPGDVFRDLVGS 229
Query: 234 AYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWG------------ETEQSIFDAI 281
AYYVAPEVLRR+YG EADIWSAGVILYILLSGVPPFW E EQ IFDAI
Sbjct: 230 AYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAGIFTLFVNLLCEENEQGIFDAI 289
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
LRGHIDF+SDPWP+ISSSAKD+VKKML ADPKERLSA EVLNHPWMRVDGDA DKPLDIA
Sbjct: 290 LRGHIDFASDPWPSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDAPDKPLDIA 349
Query: 342 VLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
VLTRMKQFRAMNKLKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPK
Sbjct: 350 VLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPK 409
Query: 402 LGTRLSESEVRQLMEA--ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
LGT+LSESEVRQLMEA ADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFD D S
Sbjct: 410 LGTKLSESEVRQLMEAVSADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDKS 469
Query: 460 --------TSQWKSWNMRLRSIIWEM 477
S K +NM I E+
Sbjct: 470 GYITMEELESALKKYNMGDEKTIKEI 495
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|114804153|gb|ABC47163.2| CDPK1 [Ipomoea nil] gi|397746248|gb|AFO63177.1| calcium dependent protein kinase 1 [Ipomoea nil] | Back alignment and taxonomy information |
|---|
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/467 (79%), Positives = 412/467 (88%), Gaps = 22/467 (4%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATS--------S 52
MG+CN +PSS +T+A G + DPP PP+ + + S
Sbjct: 1 MGSCNSIPSSP--FAATSA-----------GGESDPP-PPKNDITVLPPSQPPPPRPFLS 46
Query: 53 SVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE 112
VGRVLG+PMEDV +TYIFG ELGRGQFGVTYLVTH+ T+++ ACKSI++RKL+++DDV+
Sbjct: 47 GVGRVLGRPMEDVHSTYIFGGELGRGQFGVTYLVTHRKTRERLACKSIATRKLLSKDDVD 106
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN 172
DVRREVQIMHHLTGHRNIVELKG YEDR+ V+L+M+LCAGGELFDRIIAKGHYSERAAA
Sbjct: 107 DVRREVQIMHHLTGHRNIVELKGTYEDRNHVHLVMELCAGGELFDRIIAKGHYSERAAAG 166
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
LCRQMVTV+HYCHSMGVMHRDLKPENFLF SS E+SPLKATDFGLSVFFKPGD FKDLVG
Sbjct: 167 LCRQMVTVLHYCHSMGVMHRDLKPENFLFLSSDENSPLKATDFGLSVFFKPGDTFKDLVG 226
Query: 233 SAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
SAYYVAPEVLRRNYG EADIWSAGVILYILLSGVPPFWGE EQSIFDA+LRGH+DFSSDP
Sbjct: 227 SAYYVAPEVLRRNYGPEADIWSAGVILYILLSGVPPFWGENEQSIFDAVLRGHLDFSSDP 286
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352
WP+ISSSAKD+VKKML +DPKERLSA +VLNHPWMR DGDASDKP+DIA L+RMKQFRAM
Sbjct: 287 WPSISSSAKDLVKKMLRSDPKERLSATDVLNHPWMREDGDASDKPIDIAALSRMKQFRAM 346
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
NKLKKVALKVIAENLSEEEI+GLKEMFKS+DTD+SGTIT+EELKAGL K+GT+LSESEVR
Sbjct: 347 NKLKKVALKVIAENLSEEEIIGLKEMFKSIDTDDSGTITYEELKAGLTKMGTKLSESEVR 406
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
QLMEAADVDGNGTIDY+EFITATMHMNRVERE+HLYKAFEYFDKD S
Sbjct: 407 QLMEAADVDGNGTIDYLEFITATMHMNRVEREDHLYKAFEYFDKDKS 453
|
Source: Ipomoea nil Species: Ipomoea nil Genus: Ipomoea Family: Convolvulaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 480 | ||||||
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.837 | 0.759 | 0.810 | 6.8e-182 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.837 | 0.761 | 0.753 | 3.2e-168 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.837 | 0.768 | 0.751 | 2.9e-167 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.837 | 0.771 | 0.721 | 5.3e-159 | |
| TAIR|locus:2092399 | 541 | CPK9 "calmodulin-domain protei | 0.837 | 0.743 | 0.713 | 3.7e-158 | |
| TAIR|locus:2138897 | 531 | CPK21 "calcium-dependent prote | 0.835 | 0.755 | 0.699 | 7.2e-155 | |
| TAIR|locus:2204340 | 561 | CPK29 "calcium-dependent prote | 0.835 | 0.714 | 0.684 | 3.9e-153 | |
| TAIR|locus:2036783 | 551 | CPK19 "calcium-dependent prote | 0.837 | 0.729 | 0.679 | 1.4e-149 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.837 | 0.659 | 0.676 | 3.8e-149 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.837 | 0.622 | 0.669 | 6.2e-149 |
| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1765 (626.4 bits), Expect = 6.8e-182, P = 6.8e-182
Identities = 326/402 (81%), Positives = 373/402 (92%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+PME+VR TY FGRELGRGQFGVTYLVTHK+TKQQ ACKSI +R+L+++DD+EDVRRE
Sbjct: 67 LGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDVRRE 126
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
VQIMHHL+GHRNIV+LKGAYEDRHSVNLIM+LC GGELFDRII+KG YSERAAA+LCRQM
Sbjct: 127 VQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQM 186
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VVH CHSMGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGD FKDLVGSAYYV
Sbjct: 187 VMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSAYYV 246
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL+RNYG EADIWSAGVILYILLSGVPPFWGE E IFDAIL+G +DFS+DPWP +S
Sbjct: 247 APEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSADPWPALS 306
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
AKD+V+KML DPK+RL+AAEVLNHPW+R DG+ASDKPLD AVL+RMKQFRAMNKLKK
Sbjct: 307 DGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMNKLKK 366
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAENLSEEEI+GLKEMFKS+DTDN+G +T EEL+ GLPKLG+++SE+E+RQLMEA
Sbjct: 367 MALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEA 426
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
AD+DG+G+IDY+EFI+ATMHMNR+ERE+HLY AF++FD DNS
Sbjct: 427 ADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNS 468
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1636 (581.0 bits), Expect = 3.2e-168, P = 3.2e-168
Identities = 303/402 (75%), Positives = 356/402 (88%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+PMEDV+ +Y G+ELGRGQFGVT+L T K T QFACK+I+ RKL+N++D+EDVRRE
Sbjct: 62 LGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRRE 121
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
VQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGELFDRIIAKGHYSERAAA+L R +
Sbjct: 122 VQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTI 181
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V +VH CHSMGV+HRDLKPENFL + E+SPLKATDFGLSVF+KPG+VFKD+VGSAYY+
Sbjct: 182 VQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYI 241
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL+R YG EADIWS GV+LYILL GVPPFW E+E IF+AILRGH+DFSSDPWP+IS
Sbjct: 242 APEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPSIS 301
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
AKD+VKKML++DPK+RL+AA+VLNHPW++ DG+A D PLD AV++R+KQF+AMN KK
Sbjct: 302 PQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKK 361
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
VAL+VIA LSEEEIMGLKEMFK MDTD+SGTIT EEL+ GL K GTRLSE EV+QLMEA
Sbjct: 362 VALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEA 421
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
AD DGNGTIDY EFI ATMH+NR++REEHLY AF++FDKDNS
Sbjct: 422 ADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNS 463
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 302/402 (75%), Positives = 354/402 (88%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+PMEDV+++Y G+ELGRGQFGVT+L T K T QFACK+I+ RKL+N++D+EDVRRE
Sbjct: 57 LGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRRE 116
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
VQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGELFDRIIAKGHYSERAAA+L R +
Sbjct: 117 VQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTI 176
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V ++H CHSMGV+HRDLKPENFL S E+SPLKATDFGLSVF+KPG+VFKD+VGSAYY+
Sbjct: 177 VQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYI 236
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLRR YG EADIWS GV+LYILL GVPPFW E+E IF+AIL G +DFSSDPWP IS
Sbjct: 237 APEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPVIS 296
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
AKD+V+KML++DPK+RL+AA+VLNHPW++ DG+A D PLD AV++R+KQF+AMN KK
Sbjct: 297 PQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKK 356
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
VAL+VIA LSEEEIMGLKEMFK MDTDNSGTIT EEL+ GL K GTRLSE EV+QLMEA
Sbjct: 357 VALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEA 416
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
AD DGNGTIDY EFI ATMH+NR++REEHLY AF++FDKDNS
Sbjct: 417 ADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNS 458
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| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
Identities = 290/402 (72%), Positives = 343/402 (85%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L KP EDV+ Y +ELGRGQFGVTYL T K T ++FACKSIS +KL+ + D ED+RRE
Sbjct: 62 LEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRRE 121
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIM HL+G NIVE KGAYED +VNL+M+LCAGGELFDRI+AKGHYSERAAA++CRQ+
Sbjct: 122 IQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQI 181
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV+ CH MGVMHRDLKPENFL SS E + +KATDFGLSVF + G V+KD+VGSAYYV
Sbjct: 182 VNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYYV 241
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL+R YG E DIWSAG+ILYILLSGVPPFW ETE+ IFDAIL G IDF S PWP+IS
Sbjct: 242 APEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSIS 301
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
+SAKD+V++ML DPK R+SAAEVL HPW+R G+ASDKP+D AVL+RMKQFRAMNKLKK
Sbjct: 302 NSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKK 361
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EELK GL KLG+RL+E+EV+QLM+A
Sbjct: 362 LALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDA 421
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVDGNG+IDYIEFITATMH +R+E E++YKAF++FDKD S
Sbjct: 422 ADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGS 463
|
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| TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1541 (547.5 bits), Expect = 3.7e-158, P = 3.7e-158
Identities = 287/402 (71%), Positives = 343/402 (85%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L EDV+ Y G+ELGRGQFGVTYL T T +++ACKSIS +KL+ + D +D+RRE
Sbjct: 80 LENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDMRRE 139
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIM HL+G NIVE KGAYED +VNL+M+LCAGGELFDRIIAKGHY+ERAAA++CRQ+
Sbjct: 140 IQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVCRQI 199
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CH MGV+HRDLKPENFL SS E + +KATDFGLSVF + G V++D+VGSAYYV
Sbjct: 200 VNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSAYYV 259
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLRR YG E DIWSAG+ILYILLSGVPPFW ETE+ IFDAIL GHIDF S PWP+IS
Sbjct: 260 APEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPSIS 319
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SSAKD+V++ML ADPK R+SAA+VL HPW+R G+ASDKP+D AVL+RMKQFRAMNKLKK
Sbjct: 320 SSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKK 379
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EELK GL KLG++L+E+EV+QLM+A
Sbjct: 380 LALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDA 439
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVDGNG+IDYIEFITATMH +R+E E+LYKAF++FDKD+S
Sbjct: 440 ADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSS 481
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| TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1510 (536.6 bits), Expect = 7.2e-155, P = 7.2e-155
Identities = 281/402 (69%), Positives = 341/402 (84%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LGKP ED+R Y G+ELGRGQFG+TY+ T +ACKSI RKLI++ D EDV+RE
Sbjct: 69 LGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKRKLISKQDKEDVKRE 128
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIM +L+G NIVE+KGAYEDR S++L+M+LCAGGELFDRIIA+GHYSERAAA + R +
Sbjct: 129 IQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSI 188
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CH MGV+HRDLKPENFL SS E++ LKATDFGLSVF + G V++D+VGSAYYV
Sbjct: 189 VNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYRDIVGSAYYV 248
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLRR+YG E DIWSAGVILYILLSGVPPFW E E+ IFD +++G IDF S+PWP+IS
Sbjct: 249 APEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPWPSIS 308
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+V+KML DPK R++AA+VL HPW++ G+A DKP+D AVL+RMKQFRAMNKLKK
Sbjct: 309 ESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEAPDKPIDSAVLSRMKQFRAMNKLKK 367
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAE+LSEEEI GLK MF ++DTD SGTIT+EELK GL +LG+RLSE+EV+QLMEA
Sbjct: 368 LALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEA 427
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVDGNGTIDY EFI+ATMH +++R+EH+YKAF++FDKDNS
Sbjct: 428 ADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNS 469
|
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| TAIR|locus:2204340 CPK29 "calcium-dependent protein kinase 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1475 (524.3 bits), Expect = 3.9e-153, Sum P(2) = 3.9e-153
Identities = 275/402 (68%), Positives = 336/402 (83%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L +PM D+ Y +ELGRGQFG+TY T K +++ACKSIS RKLI R D+EDVRRE
Sbjct: 101 LNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRRE 160
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
V I+ HLTG NIVE +GAYED+ +++L+M+LC+GGELFDRII KG YSE+ AAN+ RQ+
Sbjct: 161 VMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQI 220
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VVH CH MGV+HRDLKPENFL S+ EDSP+KATDFGLSVF + G V++D+VGSAYYV
Sbjct: 221 VNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRDIVGSAYYV 280
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL RNYG E D+WSAGV+LYILLSGVPPFWGETE++IF+AIL G +D + PWP IS
Sbjct: 281 APEVLHRNYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLETSPWPTIS 340
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+++KML DPK+R++AAE L HPWM D SDKP++ AVL RMKQFRAMNKLKK
Sbjct: 341 ESAKDLIRKMLIRDPKKRITAAEALEHPWM-TDTKISDKPINSAVLVRMKQFRAMNKLKK 399
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAENLSEEEI GLK+ FK+MDTD SGTITF+EL+ GL +LG++L+ESE++QLMEA
Sbjct: 400 LALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEA 459
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVD +GTIDYIEF+TATMH +R+E+EE+L +AF+YFDKD S
Sbjct: 460 ADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRS 501
|
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| TAIR|locus:2036783 CPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1460 (519.0 bits), Expect = 1.4e-149, P = 1.4e-149
Identities = 274/403 (67%), Positives = 333/403 (82%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+P ED++ Y GRELGRGQFG+TY+ T + + FACKSI RKLI D EDVRRE
Sbjct: 87 LGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDREDVRRE 146
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIMH+L+G NIVE+KGAYEDR SV+L+M+LC GGELFD+I +GHYSE+AAA + R +
Sbjct: 147 IQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSV 206
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
V VV CH MGV+HRDLKPENFL SS E S LKATDFG+SVF + G V++D+VGSAYY
Sbjct: 207 VKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEEGKVYEDIVGSAYY 266
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
VAPEVL+RNYG DIWSAGVILYILL G PPFW ET++ IF+ ILRG IDF S+PWP+I
Sbjct: 267 VAPEVLKRNYGKAIDIWSAGVILYILLCGNPPFWAETDKGIFEEILRGEIDFESEPWPSI 326
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
S SAKD+V+ ML DPK+R +AA+VL HPW+R G+ASDKP+D AVL+RMKQ RAMNKLK
Sbjct: 327 SESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAVLSRMKQLRAMNKLK 386
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K+A K IA+NL EEE+ GLK MF +MDTD SGTIT++ELK+GL KLG+RL+E+EV+QL+E
Sbjct: 387 KLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLE 446
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVDGNGTIDYIEFI+ATM+ RVERE++L+KAF++FDKDNS
Sbjct: 447 DADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNS 489
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| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 272/402 (67%), Positives = 327/402 (81%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L + E+ + Y GR+LG+GQFG T+L K T ++FACKSI+ RKL+ +DVEDVRRE
Sbjct: 139 LQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRRE 198
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIMHHL GH N++ +KGAYED +V+L+M+ CAGGELFDRII +GHY+ER AA L R +
Sbjct: 199 IQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTI 258
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CHS+GVMHRDLKPENFLF S EDS LK DFGLS+FFKP DVF D+VGS YYV
Sbjct: 259 VGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVGSPYYV 318
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLR+ YG EAD+WSAGVI+YILLSGVPPFW ETEQ IF+ +L G +DFSSDPWP+IS
Sbjct: 319 APEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSIS 378
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+V+KML DPK+RL+A +VL HPW++VDG A DKPLD AVL+RMKQF AMNK KK
Sbjct: 379 ESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKFKK 438
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+AL+VIAE+LSEEEI GLKEMF +D D SG ITFEELKAGL ++G L ESE+ LM+A
Sbjct: 439 MALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQA 498
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVD +GTIDY EFI AT+H+N++ERE+HL+ AF YFDKD S
Sbjct: 499 ADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGS 540
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| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1454 (516.9 bits), Expect = 6.2e-149, P = 6.2e-149
Identities = 269/402 (66%), Positives = 328/402 (81%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L + E+ + Y GR+LG+GQFG T+L K T ++ACKSIS RKL+ +DVEDVRRE
Sbjct: 175 LQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRRE 234
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIMHHL GH N++ +KGAYED +V+L+M+LC+GGELFDRII +GHY+ER AA L R +
Sbjct: 235 IQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTI 294
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V V+ CHS+GVMHRDLKPENFLF S EDS LK DFGLS+FFKP +VF D+VGS YYV
Sbjct: 295 VGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYV 354
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLR+ YG E+D+WSAGVI+YILLSGVPPFW ETEQ IF+ +L G +DFSSDPWP+IS
Sbjct: 355 APEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSIS 414
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+V+KML DPK RL+A +VL HPW+++DG A DKPLD AVL+RMKQF AMNK KK
Sbjct: 415 ESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKK 474
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+AL+VIAE+LSEEEI GLK+MFK +D DNSG ITFEELKAGL ++G L ESE+ LM+A
Sbjct: 475 MALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQA 534
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ADVD +GTIDY EFI AT+H+N++ERE+HL+ AF YFDKD S
Sbjct: 535 ADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDES 576
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P49101 | CDPK2_MAIZE | 2, ., 7, ., 1, 1, ., 1 | 0.6750 | 0.8854 | 0.8284 | N/A | no |
| Q42479 | CDPK3_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.8098 | 0.8416 | 0.7637 | yes | no |
| A5A7I8 | CDPK5_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.6169 | 0.925 | 0.8299 | N/A | no |
| Q3E9C0 | CDPKY_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7264 | 0.8729 | 0.8011 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.991 |
| 3rd Layer | 2.7.11 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | CPK3 | calcium dependent protein kinase 3 (516 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.01330027 | hypothetical protein (876 aa) | • | 0.800 | |||||||
 | eugene3.00121046 | hypothetical protein (907 aa) | • | 0.800 | |||||||
 | eugene3.00010578 | hypothetical protein (927 aa) | • | 0.800 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 480 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-104 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 9e-95 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-71 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-64 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-64 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-63 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 4e-61 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-57 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-54 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 5e-54 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-52 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 6e-51 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-49 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-46 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 1e-45 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-45 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 4e-45 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 5e-44 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 8e-44 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-43 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 6e-43 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 8e-42 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-41 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 7e-41 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 2e-40 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 2e-39 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 2e-38 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-37 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-37 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 7e-37 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 9e-37 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-36 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-36 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-36 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 6e-36 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 9e-36 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 3e-35 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 3e-35 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 4e-35 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 3e-34 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 3e-34 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 4e-34 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 5e-34 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 7e-34 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-33 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-33 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-33 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 2e-33 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 4e-33 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 1e-32 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 2e-32 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 3e-32 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 3e-32 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 4e-32 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 5e-32 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 1e-31 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 1e-31 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-31 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-31 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 4e-31 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 6e-31 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 9e-31 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 1e-30 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 2e-30 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 2e-30 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 3e-30 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-30 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 4e-30 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 5e-30 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 6e-30 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 8e-30 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 1e-29 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 1e-29 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-29 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-29 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-29 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-29 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 4e-29 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 6e-29 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 8e-29 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-28 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 1e-28 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 1e-28 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-28 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 2e-28 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 2e-28 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-28 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 3e-28 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 4e-28 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-28 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 8e-28 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 8e-28 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 9e-28 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 9e-28 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 1e-27 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 2e-27 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 2e-27 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-27 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 3e-27 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 3e-27 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 3e-27 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 4e-27 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 4e-27 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 5e-27 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 5e-27 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 7e-27 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 1e-26 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-26 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-26 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 1e-26 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 2e-26 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 2e-26 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 3e-26 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 3e-26 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 3e-26 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 3e-26 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 4e-26 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 4e-26 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 5e-26 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 8e-26 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 8e-26 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 8e-26 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 9e-26 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-25 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 1e-25 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-25 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-25 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-25 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 3e-25 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 6e-25 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 6e-25 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 7e-25 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 1e-24 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-24 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 1e-24 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-24 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 1e-24 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 1e-24 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-24 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-24 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-24 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 4e-24 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 4e-24 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-24 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 5e-24 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 7e-24 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-23 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-23 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-23 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 2e-23 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 4e-23 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 4e-23 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 5e-23 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 1e-22 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 1e-22 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-22 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-22 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 3e-22 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 4e-22 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 4e-22 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 7e-22 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 1e-21 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 1e-21 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-21 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 4e-21 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 4e-21 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 5e-21 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 1e-20 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-20 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 2e-20 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 2e-20 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-20 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 4e-20 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 7e-20 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 8e-20 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-19 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-19 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 2e-19 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-19 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 3e-19 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 1e-18 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 1e-18 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 2e-18 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-18 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 3e-18 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 4e-18 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-17 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-17 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 2e-17 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 2e-17 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 3e-17 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 3e-17 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 4e-17 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 5e-17 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 6e-17 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-16 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 2e-16 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 4e-16 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 4e-16 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 4e-16 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 4e-16 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 4e-16 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 6e-16 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 6e-16 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-15 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-15 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-15 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 3e-15 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 9e-15 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-14 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-14 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 1e-14 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 2e-14 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-14 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 3e-14 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 6e-14 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 7e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 1e-13 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-13 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-13 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-13 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-13 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-13 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-13 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-13 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 5e-13 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 5e-13 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 8e-13 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 9e-13 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 1e-12 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-12 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 2e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-12 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-12 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 3e-12 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 3e-12 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-12 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-12 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 3e-12 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-12 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-12 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-12 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 3e-11 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 3e-11 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 9e-11 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 1e-10 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-10 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 1e-10 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 2e-10 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-10 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-10 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-10 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 4e-10 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 4e-10 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 5e-10 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 7e-10 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 9e-10 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-09 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 1e-09 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 2e-09 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-09 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-09 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-09 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-09 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 4e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-09 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 6e-09 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 9e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-08 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 2e-08 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-08 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-08 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-08 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 7e-08 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-07 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 2e-07 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-07 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 2e-07 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 3e-07 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-07 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 3e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 3e-07 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-07 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 4e-07 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 6e-07 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 6e-07 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 9e-07 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 9e-07 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-06 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-06 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-06 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 3e-06 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 3e-06 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 3e-06 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 5e-06 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 7e-06 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 7e-06 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 8e-06 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 1e-05 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 3e-05 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 3e-05 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 4e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 8e-05 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 9e-05 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 2e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 3e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 3e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 6e-04 | |
| cd08227 | 327 | cd08227, PK_STRAD_alpha, Pseudokinase domain of ST | 8e-04 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.001 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 0.001 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 0.003 | |
| cd08226 | 328 | cd08226, PK_STRAD_beta, Pseudokinase domain of STE | 0.003 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 311 bits (798), Expect = e-104
Identities = 109/261 (41%), Positives = 150/261 (57%), Gaps = 9/261 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +LG G FG YL K T + A K I +K+ + D E + RE++I+ L H
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKI--KKDRERILREIKILKKL-KHP 57
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L +ED + L+M+ C GG+LFD + +G SE A RQ+++ + Y HS G
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YG 247
++HRDLKPEN L ED +K DFGL+ PG+ VG+ Y+APEVL YG
Sbjct: 118 IVHRDLKPENILLD---EDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYG 174
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
DIWS GVILY LL+G PPF G+ + +F I + F W +IS AKD+++K
Sbjct: 175 KAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW-DISPEAKDLIRK 233
Query: 307 MLHADPKERLSAAEVLNHPWM 327
+L DP++RL+A E L HP+
Sbjct: 234 LLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 286 bits (735), Expect = 9e-95
Identities = 106/265 (40%), Positives = 146/265 (55%), Gaps = 11/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y R+LG G FG Y HK T + A K + R + RRE++I+ L H
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRL-SHP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L A+ED+ + L+M+ C GG+LFD + G SE A + Q++ + Y HS G
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR--RN 245
++HRDLKPEN L E+ +K DFGL+ K VG+ +Y+APEVL
Sbjct: 119 IIHRDLKPENILLD---ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNG 175
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGE---TEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
YG + D+WS GVILY LL+G PPF GE + + IL ++F W + S AKD
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++KK L+ DP +R +A E+L HPW
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 2e-71
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 13/258 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV KDT + +A K + +K+I R +VE E I+ + H IV+L
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++ + L+++ GGELF + +G +SE A ++V + Y HS+G+++RDL
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L D +K TDFGL+ G G+ Y+APEVL YG D
Sbjct: 120 KPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDW 176
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GV+LY +L+G PPF+ E + I++ IL+ + F +S A+D++ +L DP
Sbjct: 177 WSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE----FLSPEARDLISGLLQKDP 232
Query: 313 KERL---SAAEVLNHPWM 327
+RL A E+ HP+
Sbjct: 233 TKRLGSGGAEEIKAHPFF 250
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 1e-64
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 18/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++G+G FG YLV K + + K I + + + ED EV+I+ L H NI++
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIK 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRI----IAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++E++ + ++M+ GG+L +I + E + Q+ + Y HS
Sbjct: 64 YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123
Query: 189 VMHRDLKPEN-FLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
++HRD+KP+N FL S + +K DFG+S V D+ K +VG+ YY++PE+ +
Sbjct: 124 ILHRDIKPQNIFLTS----NGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKP 179
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI-SSSAKDIV 304
Y ++DIWS G +LY L + PF GE + IL+G P P+ SS +++V
Sbjct: 180 YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PPIPSQYSSELRNLV 235
Query: 305 KKMLHADPKERLSAAEVLNHP 325
+L DP+ER S A++L P
Sbjct: 236 SSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 2e-64
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 33/286 (11%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + FG+ +G G F L K+T +++A K + R+LI V+ V+ E +++ L G
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H I++L ++D ++ +++ GEL I G E+ +++ + Y HS
Sbjct: 61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-------------------- 226
G++HRDLKPEN L +D +K TDFG + P
Sbjct: 121 KGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177
Query: 227 -FKDLVGSAYYVAPEVLRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
F VG+A YV+PE+L G +D+W+ G I+Y +L+G PPF G E F IL+
Sbjct: 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERL----SAAEVLNHPW 326
F PN AKD+++K+L DP++RL E+ HP+
Sbjct: 238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 6e-63
Identities = 89/255 (34%), Positives = 126/255 (49%), Gaps = 44/255 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G FG YL K T ++ A K I + +E++ RE++I+ L H NIV+L
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED--SSSLLEELLREIEILKKLN-HPNIVKLY 57
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G +ED + + L+M+ C GG L D + G SE + Q++ + Y HS G++HRD
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLRRN--YGAEA 250
LKPEN L S ++ +K DFGLS + K +VG+ Y+APEVL Y ++
Sbjct: 118 LKPENILLDS--DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
DIWS GVILY L KD+++KML
Sbjct: 176 DIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200
Query: 311 DPKERLSAAEVLNHP 325
DP++R SA E+L H
Sbjct: 201 DPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 4e-61
Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+ +G +G +L K T +A K I +I ++ V+ V E I+ +V+L
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLY 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++ L+M+ GG+L + G E A ++V + Y HS G++HRDL
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVF-------FKPGDVFKD--LVGSAYYVAPEV-LRR 244
KP+N L S+ LK TDFGLS D +D +VG+ Y+APEV L +
Sbjct: 120 KPDNILIDSNGH---LKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ D WS G ILY L G+PPF GET + IF IL G I++ D +S A D++
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234
Query: 305 KKMLHADPKERL---SAAEVLNHPW 326
K+L DP++RL S E+ NHP+
Sbjct: 235 SKLLVPDPEKRLGAKSIEEIKNHPF 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 4e-57
Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 20/266 (7%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G LGRG FG YL KDT + A KS+ + +++E + RE++I+ L H NIV
Sbjct: 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSG-DSEEELEALEREIRILSSLQ-HPNIV 62
Query: 132 ELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
G+ D +++N+ ++ +GG L + G E RQ++ + Y HS G+
Sbjct: 63 RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK---PGDVFKDLVGSAYYVAPEVLRRN- 245
+HRD+K N L S +K DFG + G+ + G+ Y++APEV+R
Sbjct: 123 VHRDIKGANILVDSDGV---VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI----SSSAK 301
YG ADIWS G + + +G PP W E A+ I S +P P I S AK
Sbjct: 180 YGRAADIWSLGCTVIEMATGKPP-WSELGNP-MAALY--KIGSSGEP-PEIPEHLSEEAK 234
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWM 327
D ++K L DPK+R +A E+L HP++
Sbjct: 235 DFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 1e-54
Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 18/262 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G FG LV K + FA K + R ++ E + E +I+ H IV+L
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILE-ECNHPFIVKLY 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++D+ + ++M+ C GGEL+ + +G + E A +V Y H+ G+++RDL
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIW 253
KPEN L S+ +K DFG + K G G+ YVAPE+ L + Y D W
Sbjct: 120 KPENLLLDSNGY---VKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176
Query: 254 SAGVILYILLSGVPPFWGETE--QSIFDAILRG--HIDFSSDPWPNISSSAKDIVKKMLH 309
S G++LY LL+G PPF + E I++ IL+G ++F + I +AKD++K++L
Sbjct: 177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN----YIDKAAKDLIKQLLR 232
Query: 310 ADPKERL-----SAAEVLNHPW 326
+P+ERL ++ H W
Sbjct: 233 RNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 5e-54
Identities = 93/274 (33%), Positives = 146/274 (53%), Gaps = 17/274 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + F + LG G FG LV HK + + +A K +S K++ VE V E +I+ +
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR- 59
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H +V L G+++D ++ L+M+ GGELF + G + E A Q+V + Y HS
Sbjct: 60 HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRN 245
+ +++RDLKPEN L S D +K TDFG + K L G+ Y+APE+ L +
Sbjct: 120 LDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGRT--YTLCGTPEYLAPEIILSKG 174
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
YG D W+ G+++Y +L+G PPF+ + I++ IL G + F S S AKD+++
Sbjct: 175 YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLIR 230
Query: 306 KMLHADPKERL-----SAAEVLNHPWMR-VDGDA 333
+L D +RL ++ NHPW +D A
Sbjct: 231 NLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIA 264
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 3e-52
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++G+G FG Y HK T ++ A K I + E + E+QI+ H NIV+
Sbjct: 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVK 61
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMH 191
G+Y + + ++M+ C+GG L D + + +E A +C++++ + Y HS G++H
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEA 250
RD+K N L +S E +K DFGLS +VG+ Y++APEV+ Y +A
Sbjct: 122 RDIKAANILLTSDGE---VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKA 178
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWP-NISSSAKDIVKKML 308
DIWS G+ L G PP+ +E A+ + P S KD +KK L
Sbjct: 179 DIWSLGITAIELAEGKPPY---SELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCL 235
Query: 309 HADPKERLSAAEVLNHPW 326
+P++R +A ++L HP+
Sbjct: 236 QKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 6e-51
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ R +G+G FG +V +DTK+ FA K ++ +K + + V +V E +I+ L H
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HP 60
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+V L +++D ++ L++DL GG+L + K +SE ++V + Y HS G
Sbjct: 61 FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
++HRD+KP+N L E + TDF ++ P + G+ Y+APEVL R+ Y
Sbjct: 121 IIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYS 177
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D WS GV Y L G P+ G + D I S+ A D + K+
Sbjct: 178 VAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQETADVLYPATWSTEAIDAINKL 236
Query: 308 LHADPKERLSAA--EVLNHPWM 327
L DP++RL ++ NHP+
Sbjct: 237 LERDPQKRLGDNLKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 172 bits (436), Expect = 3e-49
Identities = 96/295 (32%), Positives = 139/295 (47%), Gaps = 30/295 (10%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y R+LG G FG YL + + A K ++ + +VE RE+QI+ L
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI---IAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L ++D S+ L+M+ GG L D + KG SE A + Q+++ + Y H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-------FKDLVGSAYYVA 238
S G++HRD+KPEN L + +K DFGL+ VG+ Y+A
Sbjct: 119 SKGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 239 PEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-------- 286
PEVL + +DIWS G+ LY LL+G+PPF GE S L+ I
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK-IILELPTPSL 235
Query: 287 --DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
S IS +A D++KK+L DPK RLS++ L+H + D
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSD 290
|
Length = 384 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 3e-46
Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 10/260 (3%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ + +G FG YL + T FA K + +I ++ V +V+ E IM + +
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++ + + L+M+ GG+ I G E A ++V V H G++HR
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEA-D 251
D+KPEN L + LK TDFGLS + G K VG+ Y+APE + + D
Sbjct: 122 DIKPENLLIDQTGH---LKLTDFGLS---RNGLENKKFVGTPDYLAPETILGVGDDKMSD 175
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
WS G +++ L G PPF ET ++FD IL I++ + S A D++ ++L D
Sbjct: 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235
Query: 312 PKERLSA---AEVLNHPWMR 328
P +RL A E+ +HP+ +
Sbjct: 236 PAKRLGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-45
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
Y G +GRG FGV Y + +T A K IS K I + ++ + +E+ ++ +L H
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK-IKEEALKSIMQEIDLLKNLK-H 58
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
NIV+ G+ E S+ +I++ G L I G + E A Q++ + Y H
Sbjct: 59 PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ 118
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR-RN 245
GV+HRD+K N L + +D +K DFG++ +VG+ Y++APEV+
Sbjct: 119 GVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG 175
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----NISSSAK 301
+DIWS G + LL+G PP++ + I D P IS K
Sbjct: 176 ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI-------VQDDHPPLPEGISPELK 228
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWM 327
D + + DP R +A ++L HPW+
Sbjct: 229 DFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 1e-45
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +LV KDT Q +A K + +I R+ + VR E I+ IV+L
Sbjct: 9 IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS-PWIVKLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D + L+M+ GG+L + +I K + E A ++V + H +G +HRD+
Sbjct: 68 YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLS--------------------------VFFKPGDV-- 226
KP+N L + +K DFGL V +
Sbjct: 128 KPDNILIDADGH---IKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRR 184
Query: 227 --FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR 283
VG+ Y+APEVLR YG E D WS GVILY +L G PPF+ +T Q ++ I+
Sbjct: 185 VRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIIN 244
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAE-VLNHPWMR 328
P P +S A D++ ++L DP++RL + E + +HP+ +
Sbjct: 245 WKESLRFPPDPPVSPEAIDLICRLL-CDPEDRLGSFEEIKSHPFFK 289
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 4e-45
Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
LG+G GV Y V HK T + +A K I + D E+ R RE++ +
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKI------HVDGDEEFRKQLLRELKTLRS-CESPY 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-G 188
+V+ GA+ ++++++ GG L D + G E A + RQ++ + Y H+
Sbjct: 61 VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGSAYYVAPEVLR-RNY 246
++HRD+KP N L +S E +K DFG+S + D VG+ Y++PE ++ +Y
Sbjct: 121 IIHRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESY 177
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP--NISSSAKDIV 304
ADIWS G+ L G PF Q F +++ D P S +D +
Sbjct: 178 SYAADIWSLGLTLLECALGKFPFLP-PGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI 236
Query: 305 KKMLHADPKERLSAAEVLNHPWMR 328
L DPK+R SAAE+L HP+++
Sbjct: 237 SACLQKDPKKRPSAAELLQHPFIK 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 5e-44
Identities = 83/293 (28%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQIMHHLT 125
Y +LG G +GV Y K T + A K I +L N ++ +R E+ ++ L
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI---RLDNEEEGIPSTALR-EISLLKELK 56
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAK--GHYSERAAANLCRQMVTVV 181
H NIV+L + L+ + C D + + K G S ++ Q++ +
Sbjct: 57 -HPNIVKLLDVIHTERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLLRGL 111
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPE 240
YCHS ++HRDLKP+N L + LK DFGL+ F P + V + +Y APE
Sbjct: 112 AYCHSHRILHRDLKPQNILINRDGV---LKLADFGLARAFGIPLRTYTHEVVTLWYRAPE 168
Query: 241 VL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI----------LRG 284
+L ++Y DIWS G I +++G P F G++E IF + +
Sbjct: 169 ILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228
Query: 285 HIDFSSDP--W---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
D+ + P + D++ KML +P +R+SA E L HP+
Sbjct: 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 8e-44
Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 17/266 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G FG +LV + ++ +A K ++ ++I + V E +++ ++ H I+ L
Sbjct: 9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLF 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
D+ + ++M+ GGELF + G +S ++V + Y HS +++RDL
Sbjct: 68 WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYGAEADIW 253
KPEN L + +K TDFG + K D L G+ Y+APEV+ + + D W
Sbjct: 128 KPENILLDK---EGHIKLTDFGFAK--KLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWW 182
Query: 254 SAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPK 313
+ G+++Y +L G PPF+ + I++ IL G ++F ++ AKD++KK+L D
Sbjct: 183 ALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKKLLVVDRT 238
Query: 314 ERL-----SAAEVLNHPWMR-VDGDA 333
RL A +V NH W + VD D
Sbjct: 239 RRLGNMKNGADDVKNHRWFKSVDWDD 264
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 2e-43
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-VRREVQIMHHLTG 126
Y +G G G+ + ++T + A K ++ R+L + + RE++ +
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQAC-Q 57
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCH 185
H +V+L + L+M+ L + + + E + R ++ V Y H
Sbjct: 58 HPYVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH 116
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVL- 242
+ G+MHRDLKP N L S+ D LK DFGL+ F + ++ V + +Y APE+L
Sbjct: 117 ANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY 173
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGET--EQ--SIFDAI---------------L 282
R Y D+W+ G I LL+G P F GE EQ +F +
Sbjct: 174 GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233
Query: 283 RGHIDFSSD---PW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
I F P P+ S A D++K +L DP +RLSAAE L HP+
Sbjct: 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 6e-43
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G+G FG V K + K I + ++ + V EV I+ L H NIV
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVS-EVNILRELK-HPNIVR- 63
Query: 134 KGAYEDR------HSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVH 182
Y DR ++ ++M+ C GG+L ++I K + E + Q++ ++
Sbjct: 64 ---YYDRIIDRSNQTLYIVMEYCEGGDL-AQLIQKCKKERKYIEEEFIWRILTQLLLALY 119
Query: 183 YCH-----SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGSAYY 236
CH V+HRDLKP N +F + + +K DFGL+ F K VG+ YY
Sbjct: 120 ECHNRSDPGNTVLHRDLKPAN-IFLDANNN--VKLGDFGLAKILGHDSSFAKTYVGTPYY 176
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
++PE L Y ++DIWS G ++Y L + PPF + + I G P
Sbjct: 177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF----RRIPY 232
Query: 296 ISSSA-KDIVKKMLHADPKERLSAAEVLNHP 325
SS +++K ML+ DP +R S E+L P
Sbjct: 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 8e-42
Identities = 89/264 (33%), Positives = 128/264 (48%), Gaps = 19/264 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G +G +L KDT + A K + L ++V V E I+ T +V+L
Sbjct: 8 QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A++D + L M+ GG+ + G SE A +M V H +G +HRD
Sbjct: 67 LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
LKPENFL +S +K TDFGLS +VGS Y+APEVLR + Y D
Sbjct: 127 LKPENFLIDASGH---IKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGYDFTVDY 181
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAIL-------RGHIDFSSDPWPNISSSAKDIVK 305
WS G +LY L G PPF G T ++ + R D DP N+S A D++
Sbjct: 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD---DPRFNLSDEAWDLIT 238
Query: 306 KMLHADPKERLSAAE-VLNHPWMR 328
K++ DP R + E + NHP+ +
Sbjct: 239 KLI-NDPSRRFGSLEDIKNHPFFK 261
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 1e-41
Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 37/277 (13%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN--IVELKG 135
G +G YLV HK+T+Q+FA K I+ + LI R+ ++ V E I LT N +V +
Sbjct: 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDI---LTFAENPFVVSMFC 68
Query: 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLK 195
++E + + ++M+ GG+ + G A + V + Y H+ G++HRDLK
Sbjct: 69 SFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLK 128
Query: 196 PENFLFSSSAEDSPLKATDFGLS--------VFFKPGDVFKD--------LVGSAYYVAP 239
P+N L +S +K TDFGLS G + KD + G+ Y+AP
Sbjct: 129 PDNLLITSMGH---IKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP 185
Query: 240 EV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN--- 295
EV LR+ YG D W+ G+ILY L G PF+G+T + +F ++ I+ WP
Sbjct: 186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE-----WPEGDE 240
Query: 296 -ISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMR 328
+ + A+D++ ++L +P ERL A EV H +
Sbjct: 241 ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 7e-41
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 42/287 (14%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNI 130
++G G +GV Y K T + A K I R + RE++++ L H NI
Sbjct: 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF---ESEGIPKTALREIKLLKELN-HPNI 60
Query: 131 VELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++L + + + L+ + +L + E + Q++ + +CHS G
Sbjct: 61 IKLLDVFRHKGDLYLVFEFMDTDLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHSHG 118
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRN 245
++HRDLKPEN L + + LK DFGL+ F P + V + +Y APE+L +
Sbjct: 119 ILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKG 175
Query: 246 YGAEADIWSAGVILYILLSGVPPFWG--ETEQ--SIFDAI-------LRGHIDFSSD--- 291
Y DIWS G I LLS P F G E +Q IF + + +
Sbjct: 176 YSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235
Query: 292 --------PW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P PN S A D++ +MLH DP +R++A + L HP+
Sbjct: 236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 146 bits (372), Expect = 2e-40
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 49/295 (16%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIMHH 123
Y G++LG G + V Y K+T + A K I KL R + +D RE++++
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI---KLGERKEAKDGINFTALREIKLLQE 58
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAG---GELFDRII--AKGHYSERAAANLCRQMV 178
L H NI+ L + + ++NL+ + + D+ I + +
Sbjct: 59 LK-HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIK-----SYMLMTL 112
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYV 237
+ Y HS ++HRDLKP N L +S D LK DFGL+ F P V + +Y
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSPNRKMTHQVVTRWYR 169
Query: 238 APEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI---------- 281
APE+L R+YG D+WS G I LL VP G+++ IF+A+
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229
Query: 282 ---LRGHIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
L +++F P +P S A D+++++L +P +R++A + L HP+
Sbjct: 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 2e-39
Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 16/263 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G LG G FG + HK T + +A K + R+++ V+ V +E I+ L+ H IV
Sbjct: 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIV 81
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ +++D + V +++ GGELF + G + A ++V Y HS +++
Sbjct: 82 NMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIY 141
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RDLKPEN L + +K TDFG + K D L G+ Y+APEV++ + +G
Sbjct: 142 RDLKPENLLLDN---KGHVKVTDFGFAK--KVPDRTFTLCGTPEYLAPEVIQSKGHGKAV 196
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D W+ GV+LY ++G PPF+ +T I++ IL G + F + W A+D+VK +L
Sbjct: 197 DWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRARDLVKGLLQT 252
Query: 311 DPKERLSA-----AEVLNHPWMR 328
D +RL A+V NHP+
Sbjct: 253 DHTKRLGTLKGGVADVKNHPYFH 275
|
Length = 329 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 2e-38
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 43/293 (14%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG+G G +LV K T + FA K + +++I R+ V+ V E +I+ H +
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEIL-ATLDHPFLPT 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L +++ + L+MD C GGELF + SE A +++ + Y H +G++
Sbjct: 66 LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSV----------------------------FFK 222
+RDLKPEN L E + +DF LS F
Sbjct: 126 YRDLKPENILLH---ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFS 182
Query: 223 PGDVFK--DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFD 279
F+ VG+ Y+APEV+ + +G+ D W+ G++LY +L G PF G F
Sbjct: 183 EEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFS 242
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL----SAAEVLNHPWMR 328
IL+ + F P +SSSA+D+++K+L DP +RL AAE+ HP+ R
Sbjct: 243 NILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 2e-37
Identities = 84/269 (31%), Positives = 138/269 (51%), Gaps = 17/269 (6%)
Query: 73 RELGRGQFGVTYLV---THKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHR 128
R LG G +G +LV D + +A K + ++ + E R E Q++ +
Sbjct: 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCP 65
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+V L A++ ++LI+D GGELF + + H++E ++V + + H +G
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEVLRR-- 244
+++RD+K EN L S + + TDFGLS F + + G+ Y+APEV+R
Sbjct: 126 IIYRDIKLENILLDS---EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGS 182
Query: 245 -NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKD 302
+ D WS GV+ + LL+G PF + EQ+ I R I S P+P +S+ A+D
Sbjct: 183 GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR-RILKSKPPFPKTMSAEARD 241
Query: 303 IVKKMLHADPKERL---SAAEVLNHPWMR 328
++K+L DPK+RL A E+ NHP+ +
Sbjct: 242 FIQKLLEKDPKKRLGANGADEIKNHPFFQ 270
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 3e-37
Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D R Y ++G G G Y T + T ++ A K + + + + E + E+ IM
Sbjct: 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR----LRKQNKELIINEILIMK 70
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVV 181
H NIV+ +Y + ++M+ GG L D I +E A +CR+++ +
Sbjct: 71 DCK-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPE 240
Y HS V+HRD+K +N L S +K DFG + K +VG+ Y++APE
Sbjct: 130 EYLHSQNVIHRDIKSDNILLSKDGS---VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPE 186
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFS-SDPWPNIS 297
V++R YG + DIWS G++ + G PP+ E +++F +G + W S
Sbjct: 187 VIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKW---S 243
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
KD + K L DP++R SA E+L HP++
Sbjct: 244 PEFKDFLNKCLVKDPEKRPSAEELLQHPFL 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 7e-37
Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACK--SISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G LG G FG Y + D FA K S++ ++ V+ + +E+ ++ L H N
Sbjct: 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPN 63
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
IV+ G + ++ + ++L GG L + G + E RQ++ + Y H
Sbjct: 64 IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYG 247
+HRD+K N L ++ +K DFG++ K GS Y++APEV+ + YG
Sbjct: 124 VHRDIKGANILVDTNGV---VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYG 180
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD--PWPN-ISSSAKDIV 304
ADIWS G + + +G PP W + E A+ I S + P P+ +S AKD +
Sbjct: 181 LAADIWSLGCTVLEMATGKPP-WSQLEG--VAAVF--KIGRSKELPPIPDHLSDEAKDFI 235
Query: 305 KKMLHADPKERLSAAEVLNHP 325
K L DP R +AAE+L HP
Sbjct: 236 LKCLQRDPSLRPTAAELLEHP 256
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 9e-37
Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMH 122
N Y +G G +GV +K T + A K K +D EDV+ REV+++
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIK-----KFKESEDDEDVKKTALREVKVLR 55
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-QMVTVV 181
L H NIV LK A+ + + L+ + L + + A A Q++ +
Sbjct: 56 QLR-HENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLPPDAVRSYIWQLLQAI 113
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF--KPGDVFKDLVGSAYYVAP 239
YCHS ++HRD+KPEN L S E LK DFG + +P D V + +Y AP
Sbjct: 114 AYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARPASPLTDYVATRWYRAP 170
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------QSIFDAILRGHIDFS 289
E+L NYG D+W+ G I+ LL G P F G+++ + + FS
Sbjct: 171 ELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230
Query: 290 SDP------WPNI--------------SSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S+P +P SS A D +K L DPKERL+ E+L HP+
Sbjct: 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 1e-36
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 68/302 (22%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--------REVQIMHHL 124
++G G +G Y +K T + A K I +E+ + RE++++ L
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALKKI---------RMENEKEGFPITAIREIKLLQKL 55
Query: 125 TGHRNIVELKGAYEDRHSVNLIM-------DLCAGGELFDRIIAKGHYSERAAANLCRQM 177
H NIV LK + ++ M DL G L D + ++E +Q+
Sbjct: 56 R-HPNIVRLKEIVTSKGKGSIYMVFEYMDHDL-TG--LLDS--PEVKFTESQIKCYMKQL 109
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKDLVGSAY 235
+ + Y HS G++HRD+K N L ++ LK DFGL+ + + + V + +
Sbjct: 110 LEGLQYLHSNGILHRDIKGSNILINNDGV---LKLADFGLARPYTKRNSADYTNRVITLW 166
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--GHIDFSSD 291
Y PE+L YG E D+WS G IL L G P F G TE + I G +
Sbjct: 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDEN- 225
Query: 292 PWPN---------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
WP I SA D++ K+L DPK+R+SA + L H
Sbjct: 226 -WPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284
Query: 325 PW 326
+
Sbjct: 285 EY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 2e-36
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 25/283 (8%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G P + N ++ ++G G G+ + T K T +Q A K + RK R E + EV
Sbjct: 15 GDPRSYLDN-FV---KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRR---ELLFNEV 67
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
IM H NIVE+ +Y + ++M+ GG L D I+ +E A +C ++
Sbjct: 68 VIMRDYQ-HPNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVL 125
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD------LVG 232
+ + H+ GV+HRD+K ++ L +S D +K +DFG V K+ LVG
Sbjct: 126 KALSFLHAQGVIHRDIKSDSILLTS---DGRVKLSDFGFC-----AQVSKEVPRRKSLVG 177
Query: 233 SAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
+ Y++APEV+ R YG E DIWS G+++ ++ G PP++ E I +
Sbjct: 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKN 237
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
+S + + +ML DP +R +AAE+LNHP++ G S
Sbjct: 238 L-HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-36
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ++LG G FG YL +K+T + A K + +K + ++ ++R EV+ + L H
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMK-KKFYSWEECMNLR-EVKSLRKLNEHP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHS 186
NIV+LK + + + + + G L+ + +SE ++ Q++ + + H
Sbjct: 59 NIVKLKEVFRENDELYFVFE-YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-- 244
G HRDLKPEN L S +K DFGL+ + + D V + +Y APE+L R
Sbjct: 118 HGFFHRDLKPENLLVSGP---EVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRST 174
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG--ETEQ--SIFDAILRGHIDFSSDPW------- 293
+Y + DIW+ G I+ L + P F G E +Q I ++L G + W
Sbjct: 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC-SVL-GT--PTKQDWPEGYKLA 230
Query: 294 -------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
PN S A D++K ML DPK+R +A++ L HP+
Sbjct: 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 6e-36
Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 15/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + +I +D+V E +++ + T H + LK
Sbjct: 3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + +M+ GGELF + + +SE A ++V+ + Y HS V++RDL
Sbjct: 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + +D +K TDFGL G K G+ Y+APEVL N YG D
Sbjct: 122 KLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 178
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L DP
Sbjct: 179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 234
Query: 313 KERL-----SAAEVLNHPWMR 328
K+RL A E++ H +
Sbjct: 235 KQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 9e-36
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 22/268 (8%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G ++G G FG Y + DT + A K I + + ++++ E++++ L H N+V
Sbjct: 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLK-HPNLV 62
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ G R V + M+ C+GG L + + E Q++ + Y HS G++H
Sbjct: 63 KYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVH 122
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-----GDVFKDLVGSAYYVAPEVLRRN- 245
RD+KP N + +K DFG +V K G+ + L G+ Y+APEV+
Sbjct: 123 RDIKPANIFLDHN---GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK 179
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP---NISS 298
+G ADIWS G ++ + +G P+ + E I + GH P P +S
Sbjct: 180 GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGH----KPPIPDSLQLSP 235
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPW 326
KD + + L +DPK+R +A+E+L HP+
Sbjct: 236 EGKDFLDRCLESDPKKRPTASELLQHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 3e-35
Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 25/265 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN----RDDVEDVRREVQIMHHL--TGHR 128
+GRG +G Y H T + A K +IN DDV D++REV ++ L +
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALK------IINLDTPDDDVSDIQREVALLSQLRQSQPP 62
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM 187
NI + G+Y + +IM+ GG + R + K G +E+ + + R+++ + Y H +
Sbjct: 63 NITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKYIHKV 120
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR--R 244
GV+HRD+K N L +++ +K DFG++ + VG+ Y++APEV+ +
Sbjct: 121 GVIHRDIKAANILVTNTGN---VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK 177
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI-LRGHIDFSSDPWPNISSSAKDI 303
Y +ADIWS G+ +Y + +G PP+ ++ F A+ L S ++
Sbjct: 178 YYDTKADIWSLGITIYEMATGNPPY---SDVDAFRAMMLIPKSKPPRLEDNGYSKLLREF 234
Query: 304 VKKMLHADPKERLSAAEVLNHPWMR 328
V L +PKERLSA E+L W++
Sbjct: 235 VAACLDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 3e-35
Identities = 88/269 (32%), Positives = 142/269 (52%), Gaps = 23/269 (8%)
Query: 73 RELGRGQFGVTYLV---THKDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHR 128
+ LG+G +G + V T DT + FA K + ++ N+ D + E I+ + H
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
IV+L A++ + LI++ +GGELF + +G + E A ++ + + H G
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYYVAPEVLRRN 245
+++RDLKPEN L + +K TDFGL S+ G V G+ Y+APE+L R+
Sbjct: 121 IIYRDLKPENILLDAQGH---VKLTDFGLCKESIH--EGTVTHTFCGTIEYMAPEILMRS 175
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+G D WS G ++Y +L+G PPF E + D IL+G ++ P ++ A+D++
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLL 231
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
KK+L +P RL AAEV +HP+ R
Sbjct: 232 KKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 4e-35
Identities = 88/267 (32%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK +KQ +A K +S ++I R D E IM H IV+L
Sbjct: 51 IGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEW-IVQLH 109
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 110 YAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDV 168
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + G V D VG+ Y++PEVL+ YG
Sbjct: 169 KPDNMLLDKSGH---LKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D IS AKD++
Sbjct: 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD--IEISKQAKDLIC 283
Query: 306 KMLHADPKE--RLSAAEVLNHPWMRVD 330
L R E+ +HP+ + D
Sbjct: 284 AFLTDREVRLGRNGVDEIKSHPFFKND 310
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 3e-34
Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 31/269 (11%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
ELG G GV V H+ T + A K+I R IN + + RE+ I+H IV
Sbjct: 7 GELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHKCN-SPYIVG 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHS-MGV 189
GA+ + +++ M+ GG L D+I+ +G ER + ++ + Y H +
Sbjct: 64 FYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLRRN 245
+HRD+KP N L +S + +K DFG+S G + K VG++ Y+APE ++ N
Sbjct: 123 IHRDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPERIQGN 174
Query: 246 -YGAEADIWSAGVILYILLSG-VP-PFWGETEQSIFDAILRGHID-----FSSDPWPNIS 297
Y ++DIWS G+ L L +G P P + IF+ +L+ ++ S + S
Sbjct: 175 DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE-LLQYIVNEPPPRLPSGKF---S 230
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+D V L DP+ER S E+L HP+
Sbjct: 231 PDFQDFVNLCLIKDPRERPSYKELLEHPF 259
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 3e-34
Identities = 88/313 (28%), Positives = 137/313 (43%), Gaps = 64/313 (20%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-RDDVEDVR---REVQIMHHLTGHR 128
+ +G G +GV K T ++ A K K+ N DD+ D + RE++++ HL H
Sbjct: 6 KPIGSGAYGVVCSAVDKRTGRKVAIK-----KISNVFDDLIDAKRILREIKLLRHL-RHE 59
Query: 129 NIVELK-----GAYEDRHSVNLIMDLCAGGELFD----RII-AKGHYSERAAANLCRQMV 178
NI+ L + ED + V ++ EL + ++I + ++ Q++
Sbjct: 60 NIIGLLDILRPPSPEDFNDVYIVT------ELMETDLHKVIKSPQPLTDDHIQYFLYQIL 113
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK----DLVGSA 234
+ Y HS V+HRDLKP N L +S + LK DFGL+ P + K + V +
Sbjct: 114 RGLKYLHSANVIHRDLKPSNILVNS---NCDLKICDFGLARGVDPDEDEKGFLTEYVVTR 170
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI------- 281
+Y APE+L Y DIWS G I LL+ P F G I + +
Sbjct: 171 WYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230
Query: 282 -----------------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ S +P S A D+++KML DPK+R++A E L H
Sbjct: 231 LKFITSEKARNYLKSLPKKPKKPL-SKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289
Query: 325 PWMRVDGDASDKP 337
P++ D D+P
Sbjct: 290 PYLAQLHDPEDEP 302
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 4e-34
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG+G FG L K T + +A K + ++ DDVE E +++ H + +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + + +M+ GG+L I G + E A ++V + + H G+++R
Sbjct: 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFK----PGDVFKDLVGSAYYVAPEVLR-RNYG 247
DLK +N L S + +K DFG+ K G G+ Y+APE+L + YG
Sbjct: 121 DLKLDNVLLDS---EGHIKIADFGMC---KEGILGGVTTSTFCGTPDYIAPEILSYQPYG 174
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D W+ GV+LY +L+G PF G+ E +F +IL + + +S AK I+K
Sbjct: 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSKEAKSILKSF 230
Query: 308 LHADPKERLSA-----AEVLNHPWMR-VDGDA 333
L +P++RL ++ HP+ R +D D
Sbjct: 231 LTKNPEKRLGCLPTGEQDIKGHPFFREIDWDK 262
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 5e-34
Identities = 89/279 (31%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y HK+T A K I ++ + +++ED E+ I+ H NIV L
Sbjct: 12 ELGDGAFGKVYKAQHKETGLFAAAKII---QIESEEELEDFMVEIDILSECK-HPNIVGL 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHR 192
AY + + ++++ C GG L ++ +E +CRQM+ +++ HS V+HR
Sbjct: 68 YEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL------RRN 245
DLK N L + + +K DFG+S K +D +G+ Y++APEV+
Sbjct: 128 DLKAGNILLTLDGD---VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNP 184
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI------SSS 299
Y +ADIWS G+ L L PP E + +L+ S+P P + SSS
Sbjct: 185 YDYKADIWSLGITLIELAQMEPP---HHELNPMRVLLK---ILKSEP-PTLDQPSKWSSS 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
D +K L DP +R +AAE+L HP++ D K +
Sbjct: 238 FNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDN--KAI 274
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (327), Expect = 7e-34
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 42/287 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI---- 130
+G+G FG Y V KDT++ +A K +S ++++ + +V H G RNI
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVA----------HTIGERNILVRT 50
Query: 131 --------VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
V LK +++ + L+ D +GGELF + +G +SE A ++V +
Sbjct: 51 LLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALE 110
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP----GDVFKDLVGSAYYVA 238
+ H +++RDLKPEN L + + DFGLS K G+ Y+A
Sbjct: 111 HLHKYDIVYRDLKPENILLDA---TGHIALCDFGLS---KANLTDNKTTNTFCGTTEYLA 164
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
PEVL + Y D WS GV+++ + G PF+ E Q ++ I G + F P +
Sbjct: 165 PEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNVL 221
Query: 297 SSSAKDIVKKMLHADPKERLSA----AEVLNHPWMR-VDGDASDKPL 338
S + VK +L+ +P+ RL A E+ HP+ +D D K
Sbjct: 222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQ 268
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 1e-33
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 17/280 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+G+G FG Y K T Q A K I + D++ED+++E+Q + I +
Sbjct: 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRS-PYITK 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G++ + +IM+ C GG D ++ G E A + R+++ + Y H G +HR
Sbjct: 64 YYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHEEGKIHR 122
Query: 193 DLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YG 247
D+K N L S + +K DFG L+ + F VG+ +++APEV++++ Y
Sbjct: 123 DIKAANILLSEEGD---VKLADFGVSGQLTSTMSKRNTF---VGTPFWMAPEVIKQSGYD 176
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+ADIWS G+ L G PP + I + + S S KD V
Sbjct: 177 EKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP--SLEGNKFSKPFKDFVSLC 234
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMK 347
L+ DPKER SA E+L H +++ S L I + + K
Sbjct: 235 LNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKWK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-33
Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y +G G V Y ++ A K I K + V+++R+EVQ M
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMS-QCN 57
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFD---RIIAKGHYSERAAANLCRQMVTVVHY 183
H N+V+ ++ + L+M +GG L D +G E A + ++++ + Y
Sbjct: 58 HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGD----VFKDLVGSAYYVA 238
HS G +HRD+K N L ED +K DFG+S GD V K VG+ ++A
Sbjct: 118 LHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---IDFSSDPW 293
PEV+ Y +ADIWS G+ L +G P+ + L+ ++ +D
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
S S + ++ L DP +R +A E+L H
Sbjct: 235 K-YSKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLT--GHRNI 130
E+G G +G Y +T + A K + R ++ + + RE+ ++ L H NI
Sbjct: 6 EIGEGAYGTVYKARDLNTGRFVALKKV--RVPLSEEGIPLSTLREIALLKQLESFEHPNI 63
Query: 131 VEL----KGAYEDRH-SVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
V L G DR + L+ DL + G +L RQ++
Sbjct: 64 VRLLDVCHGPRTDRELKLTLVFEHVDQDLAT---YLSKCPKPG-LPPETIKDLMRQLLRG 119
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
V + HS ++HRDLKP+N L +S + +K DFGL+ + +V + +Y APE
Sbjct: 120 VDFLHSHRIVHRDLKPQNILVTSDGQ---VKIADFGLARIYSFEMALTSVVVTLWYRAPE 176
Query: 241 VL-RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFD--------------AI 281
VL + +Y D+WS G I L P F G +E IFD ++
Sbjct: 177 VLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236
Query: 282 LRGHIDFSS-----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
R + P I D++KKML +P +R+SA E L HP+
Sbjct: 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 2e-33
Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 15/257 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + +I +D+V E +++ + T H + LK
Sbjct: 3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++ + +M+ GGELF + + ++E A ++V+ + Y HS V++RD+
Sbjct: 62 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + +D +K TDFGL G K G+ Y+APEVL N YG D
Sbjct: 122 KLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 178
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L DP
Sbjct: 179 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 234
Query: 313 KERL-----SAAEVLNH 324
K+RL A EV+ H
Sbjct: 235 KQRLGGGPSDAKEVMEH 251
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 4e-33
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L HK + +A K + + ++ + + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L S + TDFGL + G+ Y+APEVLR+ Y D
Sbjct: 123 KPENILLDS---QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W G +LY +L G+PPF+ ++D IL + PNIS SA+ +++ +L D
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQKDR 235
Query: 313 KERLSAA----EVLNHPWMR 328
+RL A E+ NH +
Sbjct: 236 TKRLGAKDDFLEIKNHVFFS 255
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 1e-32
Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 18/268 (6%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDD-VEDVRREVQIMHHLTGHRNI 130
LG G +G +LV T DT + +A K + L+ + VE R E ++ H+ +
Sbjct: 8 LGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL 67
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L A++ ++LI+D +GGE+F + + ++SE +++ + + H +G++
Sbjct: 68 VTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIV 127
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFF--KPGDVFKDLVGSAYYVAPEVLR--RNY 246
+RD+K EN L S + + TDFGLS F + + G+ Y+APE++R +
Sbjct: 128 YRDIKLENILLDS---EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGH 184
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
G D WS G++++ LL+G PF E E++ + R I P+P+ I A+D++
Sbjct: 185 GKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR-RILKCDPPFPSFIGPEAQDLLH 243
Query: 306 KMLHADPKERLSAA-----EVLNHPWMR 328
K+L DPK+RL A E+ HP+ +
Sbjct: 244 KLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 2e-32
Identities = 82/262 (31%), Positives = 140/262 (53%), Gaps = 23/262 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + K + +Q A K + RK R E + EV IM H+N+VE+
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQ-HQNVVEM 83
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+++ +E A +C ++ + Y HS GV+HRD
Sbjct: 84 YKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APEV+ R YG E D
Sbjct: 143 IKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVD 199
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK------DIVK 305
IWS G+++ ++ G PP++ ++ A+ R P P + ++ K D ++
Sbjct: 200 IWSLGIMVIEMVDGEPPYFSDSPVQ---AMKR----LRDSPPPKLKNAHKISPVLRDFLE 252
Query: 306 KMLHADPKERLSAAEVLNHPWM 327
+ML +P+ER +A E+L+HP++
Sbjct: 253 RMLTREPQERATAQELLDHPFL 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-32
Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 17/279 (6%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T K T +Q A K + RK R E + EV IM H N+V++
Sbjct: 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYH-HENVVDM 84
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + Y H+ GV+HRD
Sbjct: 85 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 143
Query: 194 LKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L +S D +K +DFG + K K LVG+ Y++APEV+ R YG E D
Sbjct: 144 IKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVD 200
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +SS + + ML +
Sbjct: 201 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDNLPPRVKDSHKVSSVLRGFLDLMLVRE 259
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +A E+L HP++++ G S ++ M+Q+R
Sbjct: 260 PSQRATAQELLQHPFLKLAGPPS------CIVPLMRQYR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 3e-32
Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G G +G Y T + A K I KL DD E +++E+ ++ H NIV
Sbjct: 10 RIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKECR-HPNIVAY 65
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y R + ++M+ C GG L D + +G SE A +CR+ + + Y H G +HR
Sbjct: 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL----RRNYG 247
D+K N L + + +K DFG+S K +G+ Y++APEV + Y
Sbjct: 126 DIKGANILLTEDGD---VKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYD 182
Query: 248 AEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAK----- 301
+ DIW+ G+ L PP + +++F I S+ P P + K
Sbjct: 183 GKCDIWALGITAIELAELQPPMFDLHPMRALF------LISKSNFPPPKLKDKEKWSPVF 236
Query: 302 -DIVKKMLHADPKERLSAAEVLNHP 325
D +KK L DPK+R +A ++L HP
Sbjct: 237 HDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 4e-32
Identities = 83/308 (26%), Positives = 133/308 (43%), Gaps = 61/308 (19%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G FG LV DT +A K++ ++ R+ V+ E I+ + +V+
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVK 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D+ ++ +MD GG++ +I G + E A ++ + H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL---------SVFFKPGDVFK--------------- 228
D+KP+N L D +K TDFGL S +++ GD +
Sbjct: 126 DIKPDNILID---RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182
Query: 229 --------------------DLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVP 267
LVG+ Y+APEVL R Y D WS GVILY +L G P
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242
Query: 268 PFW----GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
PF ET+ + + HI +S A D++ + L ++RL A E
Sbjct: 243 PFLADTPAETQLKVINWETTLHI----PSQAKLSREASDLILR-LCCGAEDRLGKNGADE 297
Query: 321 VLNHPWMR 328
+ HP+ +
Sbjct: 298 IKAHPFFK 305
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 5e-32
Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G Y HK+T Q A K + +D++++ +E+ I+ IV+
Sbjct: 11 LGEGSYGSVYKAIHKETGQVVAIKVVP-----VEEDLQEIIKEISILKQ-CDSPYIVKYY 64
Query: 135 GAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y + ++M+ C G + D +I K +E A + Q + + Y HS +HR
Sbjct: 65 GSYFKNTDLWIVMEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYLHSNKKIHR 123
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD---LVGSAYYVAPEVLRR-NYGA 248
D+K N L + E+ K DFG+S + D ++G+ +++APEV++ Y
Sbjct: 124 DIKAGNILLN---EEGQAKLADFGVS--GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNN 178
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSSAKDIVKK 306
+ADIWS G+ + G PP+ I SDP W S D VKK
Sbjct: 179 KADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKW---SPEFNDFVKK 235
Query: 307 MLHADPKERLSAAEVLNHPWM 327
L DP+ER SA ++L HP++
Sbjct: 236 CLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 1e-31
Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 52/299 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV KDT +A K + +++ ++ V VR E I+ + +V+L
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D + + LIM+ GG++ ++ K ++E + + + H +G +HRD+
Sbjct: 68 YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK--------------PGDVFKDL---------- 230
KP+N L + +K +DFGL K F D
Sbjct: 128 KPDNLLLDAKGH---IKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRK 184
Query: 231 ---------------VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETE 274
VG+ Y+APEV + Y E D WS GVI+Y +L G PPF +
Sbjct: 185 AETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP 244
Query: 275 QSIFDAIL--RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMR 328
Q + I+ + + F + +S AKD++K++ + + RL E+ +HP+ +
Sbjct: 245 QETYRKIINWKETLQFPDE--VPLSPEAKDLIKRLC-CEAERRLGNNGVNEIKSHPFFK 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 83/269 (30%), Positives = 141/269 (52%), Gaps = 19/269 (7%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNI 130
LG G +G +LV + D+ + +A K + ++ + E R E Q++ H+ +
Sbjct: 8 LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 67
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L A++ ++LI+D GGELF + + + E+ ++V + + H +G++
Sbjct: 68 VTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGII 127
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEVLRRNYGA 248
+RD+K EN L S + + TDFGLS F +V + G+ Y+AP+++R G
Sbjct: 128 YRDIKLENILLDS---NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGG 184
Query: 249 E---ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDIV 304
D WS GV++Y LL+G PF + E++ I R I S P+P +S+ AKDI+
Sbjct: 185 HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQEMSALAKDII 243
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
+++L DPK+RL A E+ HP+ +
Sbjct: 244 QRLLMKDPKKRLGCGPSDADEIKKHPFFQ 272
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 2e-31
Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 25/267 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH--HLTGHRNIVE 132
LGRG FG L +K T + +A K++ +I RD+VE + E +I + H +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ V +M+ AGG+L I +SE A +V + Y H +++R
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLM-MHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSAYYVAPEVL-RRNYG 247
DLK +N L + + +K DFGL K G F D G+ ++APEVL +Y
Sbjct: 126 DLKLDNLLLDT---EGFVKIADFGLC---KEGMGFGDRTSTFCGTPEFLAPEVLTETSYT 179
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDIVKK 306
D W GV++Y +L G PF G+ E+ +FD+I+ + +P +S A I+++
Sbjct: 180 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV-----RYPRFLSREAISIMRR 234
Query: 307 MLHADPKERLSAAE-----VLNHPWMR 328
+L +P+ RL + E V P+ R
Sbjct: 235 LLRRNPERRLGSGEKDAEDVKKQPFFR 261
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 4e-31
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 53/290 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-DDVEDVR--REVQIMHHLTGHRNIV 131
+G G F + T + +A K + +E V RE+Q + L+ H NI+
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIK-----CMKKHFKSLEQVNNLREIQALRRLSPHPNIL 61
Query: 132 ELKGAYEDRH--SVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSMG 188
L DR + L+ +L L++ I + E+ + Q++ + + H G
Sbjct: 62 RLIEVLFDRKTGRLALVFEL-MDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFG--LSVFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+ HRD+KPEN L +D LK DFG ++ KP + + + + +Y APE L +
Sbjct: 121 IFHRDIKPENILI----KDDILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLLTDG 174
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---------IDFSSDPW-- 293
YG + DIW+ G + + +LS P F G E D I + H +
Sbjct: 175 YYGPKMDIWAVGCVFFEILSLFPLFPGTNE---LDQIAKIHDVLGTPDAEVLKKFRKSRH 231
Query: 294 -----------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
PN S+ D++KK+L DP ER++A + L HP+
Sbjct: 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 4e-31
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 29/269 (10%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD------VEDVRREVQIMHHLT 125
G+ LG+G FG YL DT ++ A K + + D V + E+Q++ +L
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVP----FDPDSPETKKEVNALECEIQLLKNLQ 62
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H IV+ G D ++++ M+ GG + D++ A G +E RQ++ V Y H
Sbjct: 63 -HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFKDLVGSAYYVAPEV 241
S ++HRD+K N L S+ +K DFG L G K + G+ Y+++PEV
Sbjct: 122 SNMIVHRDIKGANILRDSAGN---VKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV 178
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPW--PNI 296
+ YG +AD+WS G + +L+ PP W E E +IF + ++P ++
Sbjct: 179 ISGEGYGRKADVWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQ-----PTNPQLPSHV 232
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHP 325
S A++ +++ + K+R SA E+L H
Sbjct: 233 SPDARNFLRRTFVENAKKRPSAEELLRHF 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 6e-31
Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 13/257 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG V +DT++ +A K+I +++R +V E ++ + IV LK
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLK 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + L++ GGELF + +G + A +++ + H V++RDL
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
KPEN L + DFGL + K D G+ Y+APE+L Y D
Sbjct: 120 KPENILLDYQGH---IALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G+PPF+ E ++ IL+ + F AKD++ +L DP
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD----GFDRDAKDLLIGLLSRDP 232
Query: 313 KERL---SAAEVLNHPW 326
RL A E+ NHP+
Sbjct: 233 TRRLGYNGAQEIKNHPF 249
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 9e-31
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 17/263 (6%)
Query: 71 FGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
F R LG G FG L T+K+ A K K+I + V+ V E +I++++ H
Sbjct: 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPF 92
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V L G+++D + L+++ GGE F + + Q+V + Y S+ +
Sbjct: 93 CVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI 152
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGA 248
++RDLKPEN L +D +K TDFG + L G+ Y+APE+L +G
Sbjct: 153 VYRDLKPENLLLD---KDGFIKMTDFGFAKVVDTRTY--TLCGTPEYIAPEILLNVGHGK 207
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
AD W+ G+ +Y +L G PPF+ I+ IL G I F + ++ K ++KK+L
Sbjct: 208 AADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----FLDNNCKHLMKKLL 263
Query: 309 HADPKERL-----SAAEVLNHPW 326
D +R A V HPW
Sbjct: 264 SHDLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 1e-30
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E QI+ + + +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS-QFVVN 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ + GG+L I G+ + E A +++ + H +
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L + ++ +D GL+V G+ + VG+ Y+APEVL + Y
Sbjct: 125 YRDLKPENILLD---DYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G ++Y ++ G PF G E+ + + R ++ S AK I K +L
Sbjct: 182 PDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLT 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
DPK+RL A EV HP+ R
Sbjct: 242 KDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 2e-30
Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 16/258 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + ++ +D+V E +++ + + H + LK
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRD 193
+++ + +M+ GGELF + + +SE A ++V+ + Y HS V++RD
Sbjct: 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 121
Query: 194 LKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
LK EN + +D +K TDFGL K G K G+ Y+APEVL N YG D
Sbjct: 122 LKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 178
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L D
Sbjct: 179 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLKKD 234
Query: 312 PKERL-----SAAEVLNH 324
PK+RL A E++ H
Sbjct: 235 PKQRLGGGPDDAKEIMQH 252
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 69/264 (26%), Positives = 143/264 (54%), Gaps = 14/264 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ +++G G FG LV K+ +Q+ K I+ K+ ++ E+ R+EV ++ ++ H
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER-EESRKEVAVLSNMK-HP 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KG-HYSERAAANLCRQMVTVVHYCHS 186
NIV+ + ++E+ ++ ++MD C GG+L+ +I A +G + E + Q+ + + H
Sbjct: 60 NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-R 244
++HRD+K +N + +D +K DFG++ V ++ + +G+ YY++PE+ R
Sbjct: 120 RKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR 176
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDI 303
Y ++DIW+ G +LY + + F +++ I+RG S P + S +++
Sbjct: 177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG----SYPPVSSHYSYDLRNL 232
Query: 304 VKKMLHADPKERLSAAEVLNHPWM 327
V ++ +P++R S +L ++
Sbjct: 233 VSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 3e-30
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 15/260 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K + + +A K + +I +D+V E +++ + T H + LK
Sbjct: 3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTSLK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + + +M+ GGELF + + +SE ++V+ + Y HS +++RDL
Sbjct: 62 YSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL 121
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + +D +K TDFGL K G+ Y+APEVL N YG D
Sbjct: 122 KLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDW 178
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S+ AK ++ +L DP
Sbjct: 179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLLSGLLIKDP 234
Query: 313 KERL-----SAAEVLNHPWM 327
+RL A E++ H +
Sbjct: 235 NKRLGGGPDDAKEIMRHSFF 254
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 3e-30
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G +G Y V Q +A K + + ++ + ED E++I+ + H NI+ K
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HPNIISYK 65
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH-----YSERAAANLCRQMVTVVHYCHSMGV 189
A+ D + + ++M+ G+L + I+K E+ + Q++ + H +
Sbjct: 66 EAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI 124
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGA 248
+HRDLK N L ++ +K D G+S K ++ K +G+ +Y+APEV + R Y
Sbjct: 125 LHRDLKSANILLVANDL---VKIGDLGISKVLK-KNMAKTQIGTPHYMAPEVWKGRPYSY 180
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI-SSSAKDIVKKM 307
++DIWS G +LY + + PPF + Q + + RG P P I S ++ ++ M
Sbjct: 181 KSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY----PPIPPIYSQDLQNFIRSM 236
Query: 308 LHADPKERLSAAEVLNHP 325
L PK R + ++L P
Sbjct: 237 LQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 4e-30
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L HK ++ +A K + + ++ + + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L S + TDFGL + G+ Y+APEVL + Y D
Sbjct: 123 KPENILLDSQGH---IVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W G +LY +L G+PPF+ ++D IL + PNI++SA+ +++ +L D
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDR 235
Query: 313 KERLSAA----EVLNH 324
+RL A E+ NH
Sbjct: 236 TKRLGAKDDFMEIKNH 251
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-30
Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y R +G G FG LV H ++ Q++A K I R + VED R+E ++ + H
Sbjct: 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI--RLPKSSSAVEDSRKEAVLLAKMK-HP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGH-YSERAAANLCRQMVTVVHYCHS 186
NIV K ++E + ++M+ C GG+L +I + +G + E QM V + H
Sbjct: 59 NIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE 118
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRR- 244
V+HRD+K +N + ++ +K DFG + + PG VG+ YYV PE+
Sbjct: 119 KRVLHRDIKSKNIFLT---QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENM 175
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDI 303
Y ++DIWS G ILY L + PF + +++ + +G S P P + S + +
Sbjct: 176 PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG----SYKPLPSHYSYELRSL 231
Query: 304 VKKMLHADPKERLSAAEVL 322
+K+M +P+ R SA +L
Sbjct: 232 IKQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 6e-30
Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 19/261 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L K + +A K + + ++NR + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLRRN-YGAE 249
KPEN L S + TDFGL K G D G+ Y+APEV+R+ Y
Sbjct: 123 KPENILLDSQGH---VVLTDFGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G +LY +L G+PPF+ ++D IL + P S +A I++++L
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232
Query: 310 ADPKERLSAA----EVLNHPW 326
D + RL A E+ HP+
Sbjct: 233 KDRQRRLGAKEDFLEIQEHPF 253
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 8e-30
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 25/277 (9%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-------RDDVEDVRREVQIM 121
++ G +G+G +G YL + T + A K + I +D V+ +R E++ +
Sbjct: 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETL 62
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
L H NIV+ G +++ ++ GG + + G + E+ Q++ +
Sbjct: 63 KDLD-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-----LVGSAYY 236
Y HS G++HRDLK +N L + D K +DFG+S K D++ + + GS ++
Sbjct: 122 AYLHSKGILHRDLKADNLLVDA---DGICKISDFGISK--KSDDIYDNDQNMSMQGSVFW 176
Query: 237 VAPEVL---RRNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFD-AILRGHIDFSS 290
+APEV+ + Y A+ DIWS G ++ + +G P W + E ++F R
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEAIAAMFKLGNKRSAPPIPP 235
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
D N+S A D + +P R +A E+L HP++
Sbjct: 236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-29
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV++ +GRG FG +V K T +A K + L+ ++ V E I+
Sbjct: 4 DVKSL------VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILS- 56
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVH 182
++ I +L+ A++D+ ++ L+M+ GG+L + + + E A ++V +H
Sbjct: 57 ISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIH 116
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPE 240
H MG +HRD+KPEN L + +K DFG + V L VG+ Y+APE
Sbjct: 117 SVHQMGYVHRDIKPENVLIDRTGH---IKLADFGSAARLTANKMVNSKLPVGTPDYIAPE 173
Query: 241 VL-------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSD 291
VL + YG E D WS GVI Y ++ G PF T ++ I+ + + F D
Sbjct: 174 VLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPED 233
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P +SS D+++ +L KERL + HP+
Sbjct: 234 --PKVSSDFLDLIQSLL-CGQKERLGYEGLCCHPF 265
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-29
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T K + + A K + RK R E + EV IM H N+VE+
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 82
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 142 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 198
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLVRD 257
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 258 PAQRATAAELLKHPFLAKAG----PPSCIVPLMRQNRMR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-29
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + FA K++ ++ DDVE E +++ H + L
Sbjct: 3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + + +M+ GG+L I + G + E A +++ + + H G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-RNYGAEADI 252
K +N L +D +K DFG+ G+ G+ Y+APE+L+ + Y D
Sbjct: 123 KLDNVLLD---KDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW-PN-ISSSAKDIVKKMLHA 310
WS GV+LY +L G PF GE E +FD+IL + P P IS AKD + K+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGEDEDELFDSIL------NDRPHFPRWISKEAKDCLSKLFER 233
Query: 311 DPKERL-SAAEVLNHPWMR 328
DP +RL ++ HP+ R
Sbjct: 234 DPTKRLGVDGDIRQHPFFR 252
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-29
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + HS G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEA 250
K +N + + +K DFG+ ++F G + G+ Y+APE + + YG
Sbjct: 128 KLDNVMLDAEGH---IKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEIIAYQPYGKSV 182
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D W+ GV+LY +L+G PPF GE E +F +I+ ++ + ++S A I K +L
Sbjct: 183 DWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLLTK 238
Query: 311 DPKERLSAA-----EVLNHPWMR 328
P +RL ++ H + R
Sbjct: 239 HPAKRLGCGPTGERDIREHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 3e-29
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 17/269 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSIS---SRKLINRDDVEDVRREVQIMHHLTGHR 128
G++LG G F Y T A K ++ + + VE +R+E+++M L H
Sbjct: 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HP 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I+ + GA + NL ++ AGG + + G + E N Q++ + Y H
Sbjct: 64 HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFK-DLVGSAYYVAPEVLR 243
++HRD+K N L S+ + L+ DFG L+ F+ L+G+ ++APEVLR
Sbjct: 124 IIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR 181
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP---NISSS 299
YG D+WS G ++ + + PP W + S A++ I ++ ++S
Sbjct: 182 GEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHLALIF-KIASATTAPSIPEHLSPG 239
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+D+ + L P++R + E+L HP R
Sbjct: 240 LRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-29
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ ++G+G FGV + V K K+ +A K I K+ NR + E+ E +++ L
Sbjct: 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SS 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHS 186
I+ ++ D+ +N++M+ G+L + E Q++ + + HS
Sbjct: 60 YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGSAYYVAPEVLR-R 244
++HRD+K N +K D G++ F +VG+ YY++PE+ +
Sbjct: 120 KKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
Y ++D+W+ GV+LY +G PF + ++ I+RG S + S ++
Sbjct: 177 PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMY---SQQLAQLI 233
Query: 305 KKMLHADPKERLSAAEVLNHP 325
+ L D ++R ++L +P
Sbjct: 234 DQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 4e-29
Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 55/313 (17%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQ 119
++ N Y+ + +G G FG+ + T Q A K I S+ L R RE++
Sbjct: 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKR-----TYRELK 61
Query: 120 IMHHLTGHRNIVELKGAY----EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR 175
++ HL H NI+ L + ED + V ++ G R++ ++
Sbjct: 62 LLKHLR-HENIISLSDIFISPLEDIYFVTELL-----GTDLHRLLTSRPLEKQFIQYFLY 115
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ + Y HS GV+HRDLKP N L + E+ LK DFGL+ P V + Y
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARIQDPQ--MTGYVSTRY 170
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL----------- 282
Y APE++ + Y E DIWSAG I +L G P F G+ + F I
Sbjct: 171 YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230
Query: 283 -----------------RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
R + FS + N SA D+++KML DP++R+SAAE L HP
Sbjct: 231 NTICSENTLRFVQSLPKREPVPFSEK-FKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289
Query: 326 WMRVDGDASDKPL 338
++ D +D+P+
Sbjct: 290 YLAPYHDPTDEPV 302
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 6e-29
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 71 FGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
G++LG G FG K + A K++ + +E+ RE +IM L
Sbjct: 3 LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKL-D 59
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQ----MVTVV 181
H N+V+L G + + ++M+ GG+L + S + Q M
Sbjct: 60 HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGME--- 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S +HRDL N L E+ +K +DFGLS +DL YY
Sbjct: 117 -YLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS---------RDLYDDDYYRKRGG 163
Query: 238 -------APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + + G+
Sbjct: 164 KLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYR-- 221
Query: 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
PN D++ + DP++R + +E++
Sbjct: 222 -LPQPPNCPPELYDLMLQCWAEDPEDRPTFSELV 254
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 8e-29
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L K +A K + + ++ + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L S + TDFGL +P + G+ Y+APEVLR+ Y D
Sbjct: 123 KPENILLDSQGH---VVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W G +LY +L G+PPF+ ++D IL + + +A D++ +LH D
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLHKDQ 235
Query: 313 KERLSAA----EVLNH 324
+ RL A E+ NH
Sbjct: 236 RRRLGAKADFLEIKNH 251
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 1e-28
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 63/319 (19%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSIS---SRKLINRDDVEDVRREVQIMHH 123
Y +ELG+G +G+ + +T ++ A K I+ S+K++ + + RE++++ H
Sbjct: 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRAL----RELKLLRH 57
Query: 124 LTGHRNIVEL-------KGAYEDRHSVNLIM--DLCAGGELFDRIIAKGH-YSERAAANL 173
GH+NI L G + + + +M DL II G ++ +
Sbjct: 58 FRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQ-------IIRSGQPLTDAHFQSF 110
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-----FK 228
Q++ + Y HS V+HRDLKP N L ++ E LK DFGL+ F
Sbjct: 111 IYQILCGLKYIHSANVLHRDLKPGNLLVNADCE---LKICDFGLARGFSENPGENAGFMT 167
Query: 229 DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--- 283
+ V + +Y APE++ ++Y D+WS G IL LL P F G+ + IL+
Sbjct: 168 EYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227
Query: 284 ----------------------GHIDFSSDPW--PNISSSAKDIVKKMLHADPKERLSAA 319
+I PN + A D+++K+L DP +R+S
Sbjct: 228 TPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE 287
Query: 320 EVLNHPWMRVDGDASDKPL 338
E L HP++ + D D+P+
Sbjct: 288 EALEHPYLAIWHDPDDEPV 306
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-28
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 21/298 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y T + A K +S + + +D+ +EV+ + L H N +E
Sbjct: 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIE 79
Query: 133 LKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
KG Y H+ L+M+ C G ++ + + K E A +C + + Y HS +
Sbjct: 80 YKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLHSHERI 137
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNY 246
HRD+K N L + E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 138 HRDIKAGNILLT---EPGTVKLADFGSASLVSPANSF---VGTPYWMAPEVILAMDEGQY 191
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-DFSSDPWPNISSSAKDIVK 305
+ D+WS G+ L PP + S I + SS+ W S ++ V
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW---SDYFRNFVD 248
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVI 363
L P++R S+ E+L H ++ + +D+ T+ R ++ L+ +K I
Sbjct: 249 SCLQKIPQDRPSSEELLKHRFVLRE-RPPTVIIDLIQRTK-DAVRELDNLQYRKMKKI 304
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 15/264 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K++ + +A K + ++ DDVE E +I+ H + +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + +M+ GG+L I + E A ++ + + + H G+++R
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEA 250
DLK +N L + K DFG+ G G+ Y+APE+L+ YG
Sbjct: 121 DLKLDNVLLD---HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSV 177
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D W+ GV+LY +L G PF E E +F+AIL + + + W +S A DI+K +
Sbjct: 178 DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LSQDAVDILKAFMTK 233
Query: 311 DPKERLSAAE------VLNHPWMR 328
+P RL + +L HP+ +
Sbjct: 234 NPTMRLGSLTLGGEEAILRHPFFK 257
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 23/264 (8%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G FG +LV T D Q +A K + L RD V + E I+ + H IV
Sbjct: 4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVR-TKMERDILAEV-NHPFIV 61
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G+++
Sbjct: 62 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVL-RRNYG 247
RDLKPEN L E+ +K TDFGLS + D K G+ Y+APEV+ RR +
Sbjct: 122 RDLKPENILLD---EEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 176
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
AD WS GV+++ +L+G PF G+ + IL+ + +S A+ +++ +
Sbjct: 177 QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRAL 232
Query: 308 LHADPKERLSAA-----EVLNHPW 326
+P RL A E+ HP+
Sbjct: 233 FKRNPANRLGAGPDGVEEIKRHPF 256
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-28
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 16/263 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI R LG+G FG L + K ++ +L ++ D E+ I+ L H
Sbjct: 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKE-RRDALNEIVILSLLQ-HP 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHS 186
NI+ + D +++ + M+ GG L+D+I+ + E Q+V+ V Y H
Sbjct: 60 NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR 243
G++HRD+K N + + +K DFG+S G + + +VG+ YY++PE+ +
Sbjct: 120 AGILHRDIKTLNIFLT---KAGLIKLGDFGISK--ILGSEYSMAETVVGTPYYMSPELCQ 174
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y ++DIW+ G +LY LL+ F ++ I++G+ + SS
Sbjct: 175 GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSELIS 231
Query: 303 IVKKMLHADPKERLSAAEVLNHP 325
+V +L DP++R +A EVL+ P
Sbjct: 232 LVHSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 2e-28
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 27/283 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
R +GRG + LV K T++ +A K + ++L+N D D++ V+ E + + H +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQASNHPFLV 59
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L ++ + +++ GG+L + + E A ++ ++Y H G+++
Sbjct: 60 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 119
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
RDLK +N L S +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 120 RDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176
Query: 250 ADIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 177 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 232
Query: 301 KDIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL A++ HP+ R VD D ++
Sbjct: 233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQ 275
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 3e-28
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 18/268 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTG 126
YI + LG+G FG YLV K + K + + +N ++ +E Q++ L
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD- 60
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN-----LCRQMVTVV 181
H IV+ ++ +R + +I + C G +L ++ H + + N Q++ V
Sbjct: 61 HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFI-QLLLGV 119
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGSAYYVAPE 240
HY H ++HRDLK +N ++ LK DFG+S D+ G+ YY++PE
Sbjct: 120 HYMHQRRILHRDLKAKNIFLKNNL----LKIGDFGVSRLLMGSCDLATTFTGTPYYMSPE 175
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L+ + Y +++DIWS G ILY + F G+ S+ I+ G + +
Sbjct: 176 ALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYS---RQ 232
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWM 327
I++ ML+ DP R SAAE+L +P++
Sbjct: 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 3e-28
Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQF-ACKSISSRKLINRDD-------VEDVRREVQ 119
Y LG G FG Y V K+ Q A K I+ D + D+ EV
Sbjct: 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCR 175
I+ H NIV + + + ++MDL G L + + K ++E N+
Sbjct: 61 IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120
Query: 176 QMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
QMV + Y H ++HRDL P N + ED + TDFGL+ +P +VG+
Sbjct: 121 QMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITDFGLAKQKQPESKLTSVVGTI 177
Query: 235 YYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE+++ YG +AD+W+ G ILY + + PPF+ S+ I ++ +P
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKI----VEAVYEPL 233
Query: 294 PN--ISSSAKDIVKKMLHADPKERLSAAEV 321
P S D++ L D + R +V
Sbjct: 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-28
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 46/287 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E++I+ H IV+L
Sbjct: 19 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILAT-CNHPYIVKL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGEL------FDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
GA+ + ++++ C GG + DR + +E +CRQM+ + Y HSM
Sbjct: 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGL-----TEPQIQVICRQMLEALQYLHSM 129
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR 243
++HRDLK N L + D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 130 KIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKTLQRRDSF---IGTPYWMAPEVVM 183
Query: 244 ------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
Y +ADIWS G+ L + PP + I + S+P P +S
Sbjct: 184 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SEP-PTLS 236
Query: 298 SSAK------DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+K D +K L P+ R SAA++L HP+ V S++PL
Sbjct: 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF--VSSVTSNRPL 281
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 4e-28
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 51/280 (18%)
Query: 70 IFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
G++LG G FG T + + A K++ + +E+ RE +IM L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDA--SEQQIEEFLREARIMRKL- 58
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY--SERAAANLCRQ----MVT 179
H NIV+L G + + ++M+ GG+L D + S + Q M
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGME- 117
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-- 237
Y S +HRDL N L E+ +K +DFGLS +DL YY
Sbjct: 118 ---YLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS---------RDLYDDDYYKVK 162
Query: 238 ---------APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + +G+
Sbjct: 163 GGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYR 222
Query: 287 DFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLN 323
P + ++ K ML DP++R + +E++
Sbjct: 223 L------PKPPNCPPELYKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 8e-28
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRREVQIMH 122
+I G +G G FG YL + + + A K + +S K R ++ + RE+ ++
Sbjct: 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLK 61
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NIV+ G+ D +N+ ++ GG + + G + E N RQ++ ++
Sbjct: 62 ELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLN 120
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-------VFFKPGDVFKDLVGSAY 235
Y H+ G++HRD+K N L + +K +DFG+S + K L GS +
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGG---IKISDFGISKKLEANSLSTKTNGARPSLQGSVF 177
Query: 236 YVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
++APEV+++ Y +ADIWS G ++ +L+G PF T+ AI + + S +
Sbjct: 178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENASPEIPS 234
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
NISS A D ++K D +R +AAE+L HP++
Sbjct: 235 NISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 8e-28
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ +G G +G Y HK T Q A K + + D+ E+++ E I+ +
Sbjct: 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSN 61
Query: 127 HRNIVELKGAYEDRHSVN------LIMDLCAGG---ELFDRIIAKGH-YSERAAANLCRQ 176
H NI GA+ ++ L+M+LC GG +L + KG E A + R+
Sbjct: 62 HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRE 121
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAY 235
+ + Y H V+HRD+K +N L + +AE +K DFG+S ++ +G+ Y
Sbjct: 122 TLRGLAYLHENKVIHRDIKGQNILLTKNAE---VKLVDFGVSAQLDSTLGRRNTFIGTPY 178
Query: 236 YVAPEV------LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
++APEV +Y A +D+WS G+ L G PP I R
Sbjct: 179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN----- 233
Query: 290 SDPWPNISSSAK------DIVKKMLHADPKERLSAAEVLNHPW 326
P P + S D + + L + ++R E+L HP+
Sbjct: 234 --PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 9e-28
Identities = 69/266 (25%), Positives = 131/266 (49%), Gaps = 16/266 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ +++G+GQF V Y + A K + ++++ +D +E+ ++ L
Sbjct: 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD- 60
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVV 181
H N+++ ++ + + +N++++L G+L R+I K ER Q+ + +
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCSAL 119
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYYVAPE 240
+ HS +MHRD+KP N ++ +K D GL FF LVG+ YY++PE
Sbjct: 120 EHMHSKRIMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 176
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQ--SIFDAILRGHIDFSSDPWPNIS 297
+ N Y ++DIWS G +LY + + PF+G+ S+ I + D+ P + S
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC--DYPPLPADHYS 234
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLN 323
+D+V + ++ DP++R + VL
Sbjct: 235 EELRDLVSRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 9e-28
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 16/263 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + ++ DDV+ E +I+ H + L
Sbjct: 3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + + +M+ GG+L +I + E + ++ + + H GV++RDL
Sbjct: 63 CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADI 252
K +N L + + K DFG+ G G+ Y+APE+L+ YG D
Sbjct: 123 KLDNILLDA---EGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV++Y +++G PPF + E +F++IL H D W +S A I+K + +P
Sbjct: 180 WALGVLMYEMMAGQPPFEADNEDDLFESIL--HDDVLYPVW--LSKEAVSILKAFMTKNP 235
Query: 313 KERLSAA-------EVLNHPWMR 328
+RL + HP+ +
Sbjct: 236 NKRLGCVASQGGEDAIKQHPFFK 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 1e-27
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG K T + +ACK + ++L R + E +I+ R IV L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL-EKVSSRFIVSLA 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHR 192
A+E + + L+M L GG+L I G + E A Q++ + + H +++R
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
DLKPEN L + ++ +D GL+V K G K G+ Y+APEVL+ Y D
Sbjct: 120 DLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVD 176
Query: 252 IWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
++ G LY +++G PF E + + L +++ S AKD+ + +
Sbjct: 177 WFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK----FSPEAKDLCEAL 232
Query: 308 LHADPKERL-----SAAEVLNHPWMR 328
L DP++RL SA EV HP +
Sbjct: 233 LQKDPEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-27
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +GRG FG+ +L K ++ K I ++ +D+ + E Q++ L+ H NI+E
Sbjct: 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIE 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
+ + ++ ++M+ GG L + I + + E + Q++ +H+ H+ ++
Sbjct: 64 YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
HRDLK +N L +K DFG+S +VG+ Y++PE+ + Y +
Sbjct: 124 HRDLKTQNILLDK--HKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQK 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
+DIW+ G +LY L S F ++ I+ G SD S + ++ ML+
Sbjct: 182 SDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISD---RYSPDLRQLILSMLN 238
Query: 310 ADPKERLSAAEVLNHP 325
DP +R ++++ P
Sbjct: 239 LDPSKRPQLSQIMAQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 2e-27
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G + T Q+ A K I+ +K + E + E+ +M
Sbjct: 16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKK---ELIINEILVMKE 72
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
L + NIV ++ + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 73 LK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEF 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
H+ V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 131 LHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S +
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSPIFR 246
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPLDIAVLTRMKQFR 350
D + + L D ++R SA E+L HP++++ S PL +A MK R
Sbjct: 247 DFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSNR 296
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G G +GV + +++T Q A K K + +D ++ RE++++ L H N+
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIK-----KFVESEDDPVIKKIALREIRMLKQLK-HPNL 62
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGV 189
V L + + ++L+ + C + + + E + Q + V++CH
Sbjct: 63 VNLIEVFRRKRKLHLVFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL--RRNY 246
+HRD+KPEN L + + +K DFG + PGD + D V + +Y APE+L Y
Sbjct: 122 IHRDVKPENILITKQGQ---IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQY 178
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETE--------QSIFDAILRGHID-FSS------- 290
G D+W+ G + LL+G P + G+++ +++ D I R H FS+
Sbjct: 179 GPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPR-HQQIFSTNQFFKGL 237
Query: 291 ------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+PNISS A +K L DP ERLS E+L HP+
Sbjct: 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 3e-27
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A K ++ L + E + E+ +M
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMN---LQQQPKKELIINEILVMRE 72
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
H NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 73 NK-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 131 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSA 300
R+ YG + DIWS G++ ++ G PP+ E ++++ G + + +S+
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 245
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+D + + L D ++R SA E+L HP++++
Sbjct: 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKI 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 3e-27
Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 57/315 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG L DTK +A K++ + ++ R+ V V+ E I+ + +V
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVR 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D+ ++ +MD GG++ +I G + E A ++ V H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL---------SVFFKPGDVFK--------------- 228
D+KP+N L D +K TDFGL S +++ GD +
Sbjct: 126 DIKPDNILID---RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 229 ------------------------DLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILL 263
LVG+ Y+APEV LR Y D WS GVILY +L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 264 SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
G PPF +T ++ P +S A D++ K+ P++RL A E
Sbjct: 243 VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRG-PEDRLGKNGADE 301
Query: 321 VLNHPWMRVDGDASD 335
+ HP+ + +SD
Sbjct: 302 IKAHPFFKTIDFSSD 316
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 3e-27
Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 47/310 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV KDT +A K + ++ ++ V +R E I+ G +V++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVKMF 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D+ ++ LIM+ GG++ ++ K SE A + V + H +G +HRD+
Sbjct: 68 YSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK---------------PGDV-FKDL-------- 230
KP+N L + +K +DFGL K P D F+++
Sbjct: 128 KPDNLLLDAKGH---VKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAET 184
Query: 231 ------------VGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
VG+ Y+APEV ++ Y D WS GVI+Y +L G PPF ET Q
Sbjct: 185 WKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET 244
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMR-VD-GD 332
+ ++ P IS AKD++ + D + R+ E+ +HP+ VD G
Sbjct: 245 YRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVDWGH 303
Query: 333 ASDKPLDIAV 342
++P I +
Sbjct: 304 IRERPAAIPI 313
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 4e-27
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E QI+ + R +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS-RFVVS 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ L GG+L I G + E A ++ + H ++
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L + ++ +D GL+V G K VG+ Y+APEV++ Y
Sbjct: 125 YRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W+ G +LY +++G PF ++ + + R + + S A+ + K +L
Sbjct: 182 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLC 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
DPKERL A EV HP +
Sbjct: 242 KDPKERLGCQGGGAREVKEHPLFK 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 4e-27
Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 18/268 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSIS--SRKLINRDDVEDVRREVQIMHHLTGHRN 129
G+ LG+G FG YL DT ++ A K + +V + E+Q++ +L H
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HER 65
Query: 130 IVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
IV+ G DR ++ + M+ GG + D++ A G +E RQ++ + Y HS
Sbjct: 66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFKDLVGSAYYVAPEVLR 243
++HRD+K N L S+ +K DFG L G + + G+ Y+++PEV+
Sbjct: 126 MIVHRDIKGANILRDSAGN---VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAK 301
YG +AD+WS G + +L+ PP W E E AI + ++ P+ IS A+
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTNPQLPSHISEHAR 239
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + + + R SA E+L HP+ ++
Sbjct: 240 DFLGCIF-VEARHRPSAEELLRHPFAQL 266
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 5e-27
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVRREVQIMHHLTGHR 128
G+ LG+G FG YL DT ++ A K + +V + E+Q++ +L H
Sbjct: 6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HE 64
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
IV+ G D ++++ M+ GG + D++ + G +E RQ++ V Y HS
Sbjct: 65 RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS 124
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK----PGDVFKDLVGSAYYVAPEVL 242
++HRD+K N L S +K DFG S + G K + G+ Y+++PEV+
Sbjct: 125 NMIVHRDIKGANILRDSVGN---VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI 181
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPW--PNIS 297
YG +ADIWS G + +L+ PP W E E +IF + ++P P++S
Sbjct: 182 SGEGYGRKADIWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQ-----PTNPVLPPHVS 235
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNH 324
+D +K++ + K R SA E+L H
Sbjct: 236 DHCRDFLKRIF-VEAKLRPSADELLRH 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 5e-27
Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 51 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 109
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 110 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 168
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + K G V D VG+ Y++PEVL+ YG
Sbjct: 169 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D +IS AK+++
Sbjct: 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLIC 283
Query: 306 KMLHADPKERL---SAAEVLNHPWMRVD 330
L D + RL E+ H + + D
Sbjct: 284 AFL-TDREVRLGRNGVEEIKRHLFFKND 310
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 7e-27
Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
LG G G K+T FA K+I++ N D + + RE++I IV+
Sbjct: 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKS-CKSPYIVK 63
Query: 133 LKGAYEDRHS--VNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCH 185
GA+ D S + + M+ C GG L D I K G E+ + ++ + Y H
Sbjct: 64 YYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH 122
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEV 241
S ++HRD+KP N L + + +K DFG+S G++ L G+++Y+APE
Sbjct: 123 SRKIIHRDIKPSNILLTRKGQ---VKLCDFGVS-----GELVNSLAGTFTGTSFYMAPER 174
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------DPWP 294
++ + Y +D+WS G+ L + PF E E + L +I +P
Sbjct: 175 IQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234
Query: 295 NI--SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
I S KD +K+ L DP R + ++L HPW++ K +++A
Sbjct: 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK---AQMKKKVNMA 280
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 57/306 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG L DT +A K++ + ++NR+ V V+ E I+ + +V+
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVK 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D+ ++ +MD GG++ +I + E A ++ + H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFK--------------------PGDVFKD--- 229
D+KP+N L D +K TDFGL F+ P D++ D
Sbjct: 126 DIKPDNILIDL---DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182
Query: 230 -------------------------LVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILL 263
LVG+ Y+APEV LR+ Y D WS GVIL+ +L
Sbjct: 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML 242
Query: 264 SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
G PPF T ++ P +S A D++ K+ + +ERL A +
Sbjct: 243 VGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCS-AEERLGRNGADD 301
Query: 321 VLNHPW 326
+ HP+
Sbjct: 302 IKAHPF 307
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 1e-26
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 68/297 (22%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--------REVQIMHHLTGHRN 129
G +GV Y K T + A K + K+ E + RE+ I+ L H N
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKL---KM------EKEKEGFPITSLREINILLKL-QHPN 65
Query: 130 IVELK----GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
IV +K G+ + + ++M DL + L + + K + + L Q+++
Sbjct: 66 IVTVKEVVVGS--NLDKIYMVMEYVEHDLKS---LMETM--KQPFLQSEVKCLMLQLLSG 118
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAP 239
V + H ++HRDLK N L ++ LK DFGL+ + P + LV + +Y AP
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVVTLWYRAP 175
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-------------- 283
E+L + Y D+WS G I LL+ P F G++E + I +
Sbjct: 176 ELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235
Query: 284 -----GHIDFSSDP-------WPNISSSAK--DIVKKMLHADPKERLSAAEVLNHPW 326
F+ P +P +S S D++ ++L DP +R+SA + L HP+
Sbjct: 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 1e-26
Identities = 84/309 (27%), Positives = 136/309 (44%), Gaps = 31/309 (10%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+D ++ E+G G FG Y T+ T + A K +S + +D+ +EV+ +
Sbjct: 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQ 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H N +E KG Y H+ L+M+ C G + K E A + + +
Sbjct: 77 QLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 135
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y HS ++HRD+K N L + E +K DFG + P + F VG+ Y++APEV+
Sbjct: 136 YLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSPANSF---VGTPYWMAPEVI 189
Query: 243 ----RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-DFSSDPWPNIS 297
Y + D+WS G+ L PP + S I + S+ W +
Sbjct: 190 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---T 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAV--LTRMK-------- 347
S + V L P+ER ++AE+L H ++R D+P + + + R K
Sbjct: 247 DSFRGFVDYCLQKIPQERPASAELLRHDFVR-----RDRPARVLIDLIQRTKDAVRELDN 301
Query: 348 -QFRAMNKL 355
Q+R M K+
Sbjct: 302 LQYRKMKKI 310
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 55/292 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G G +G+ HK+T Q A K K + +D + V+ RE++++ L H N+
Sbjct: 9 VGEGSYGMVMKCKHKETGQIVAIK-----KFLESEDDKMVKKIAMREIRMLKQLR-HENL 62
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCR----QMVTVVHYC 184
V L + + + L+ E D + Y + R Q++ + +C
Sbjct: 63 VNLIEVFRRKKRLYLVF------EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFC 116
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLR 243
HS ++HRD+KPEN L S S +K DFG + PG+V+ D V + +Y APE+L
Sbjct: 117 HSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLV 173
Query: 244 RN--YGAEADIWSAGVILYILLSGVPPFWGETE------------------QSIFD---- 279
+ YG DIW+ G ++ +L+G P F G+++ Q IF
Sbjct: 174 GDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233
Query: 280 -AILR----GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
A +R I+ +P +S D+ K+ L DP +R S++++L+H +
Sbjct: 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 2e-26
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 12/287 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A K ++ L + E + E+ +M
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMN---LQQQPKKELIINEILVMRE 72
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 73 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDF 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 131 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-ERLSAVFR 246
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPLDIAVLTRMK 347
D + + L D R SA E+L HP++++ S PL IA +K
Sbjct: 247 DFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIK 293
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 2e-26
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E QI+ + R +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVS 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ L GG+L I + + E A ++ + H ++
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L ++ +D GL+V G+ + VG+ Y+APEV++ Y
Sbjct: 125 YRDLKPENILLDDYGH---IRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G ++Y ++ G PF E+ + + R + + S +A+ I +++L
Sbjct: 182 PDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLT 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
DP RL A EV HP+ R
Sbjct: 242 KDPGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
P P SSS++S+++S K + ++ +G G G Y V H+ T + +A
Sbjct: 48 PPPSSSSSSSSSSSASGSAPSAAKSLSELER----VNRIGSGAGGTVYKVIHRPTGRLYA 103
Query: 97 CKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
K I N +D VR RE++I+ + H N+V+ ++ + ++++ G
Sbjct: 104 LKVIYG----NHED--TVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVLLEFMDG 156
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
G L IA E+ A++ RQ+++ + Y H ++HRD+KP N L +S+ +K
Sbjct: 157 GSLEGTHIAD----EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN---VKI 209
Query: 213 TDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRR--NYGA----EADIWSAGVILYILLSG 265
DFG+S + + D VG+ Y++PE + N+GA DIWS GV + G
Sbjct: 210 ADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLG 269
Query: 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA--KDIVKKMLHADPKERLSAAEVLN 323
PF G Q + A L I S P ++S + + L +P +R SA ++L
Sbjct: 270 RFPF-GVGRQGDW-ASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327
Query: 324 HPWM 327
HP++
Sbjct: 328 HPFI 331
|
Length = 353 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 3e-26
Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 31/279 (11%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E+ I+ H NIV+L
Sbjct: 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMH 191
A+ +++ ++++ CAGG + D ++ + +E +C+Q + ++Y H ++H
Sbjct: 68 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIH 126
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR---- 243
RDLK N LF+ D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 127 RDLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSF---IGTPYWMAPEVVMCETS 180
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSS 299
R Y +AD+WS G+ L + PP + I + + P W SS
Sbjct: 181 KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSE 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
KD +KK L + R + ++L HP++ V+ S+KP+
Sbjct: 238 FKDFLKKCLEKNVDARWTTTQLLQHPFVTVN---SNKPI 273
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 83/268 (30%), Positives = 135/268 (50%), Gaps = 20/268 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK +++ +A K +S ++I R D E IM +V+L
Sbjct: 51 IGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 109
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG++HRD+
Sbjct: 110 CAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 168
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L LK DFG + + G V D VG+ Y++PEVL+ YG
Sbjct: 169 KPDNMLLDKHGH---LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV L+ +L G PF+ ++ + I+ + ++F D IS AK+++
Sbjct: 226 RECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEISKHAKNLIC 283
Query: 306 KMLHADPKERL---SAAEVLNHPWMRVD 330
L D + RL E+ HP+ + D
Sbjct: 284 AFL-TDREVRLGRNGVEEIKQHPFFKND 310
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 49/308 (15%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ + +GRG +G+ + +T ++ A K I++ NR D + RE++++ HL H
Sbjct: 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIAN-AFDNRIDAKRTLREIKLLRHLD-HE 64
Query: 129 NIVELKG--------AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
N++ +K A+ D + V +MD +L I + S+ Q++
Sbjct: 65 NVIAIKDIMPPPHREAFNDVYIVYELMDT----DLHQIIRSSQTLSDDHCQYFLYQLLRG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ Y HS V+HRDLKP N L +++ + LK DFGL+ + GD + V + +Y AP
Sbjct: 121 LKYIHSANVLHRDLKPSNLLLNANCD---LKICDFGLARTTSEKGDFMTEYVVTRWYRAP 177
Query: 240 EVLRR--NYGAEADIWSAGVILYILLSGVPPFWG------------------ETEQSIFD 279
E+L Y D+WS G I LL P F G E +
Sbjct: 178 ELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237
Query: 280 A-----ILRG-----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+R F + +P+ + A D+++KML DP +R++ E L HP++
Sbjct: 238 NEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296
Query: 330 DGDASDKP 337
D SD+P
Sbjct: 297 LHDPSDEP 304
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 4e-26
Identities = 80/279 (28%), Positives = 132/279 (47%), Gaps = 34/279 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG+G +G Y V H+ T A K I R ++ + E+ I+H IV+
Sbjct: 8 ELGKGNYGSVYKVLHRPTGVTMAMKEI--RLELDESKFNQIIMELDILHKAVSPY-IVDF 64
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV-TVVHYCHSM----G 188
GA+ +V + M+ G L D++ A G +E ++ R++ VV +
Sbjct: 65 YGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLRR 244
++HRD+KP N L + + + +K DFG+S G++ L +G Y+APE ++
Sbjct: 124 IIHRDVKPTNVLVNGNGQ---VKLCDFGVS-----GNLVASLAKTNIGCQSYMAPERIKS 175
Query: 245 -------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIF---DAILRGHIDFSSDPWP 294
Y ++D+WS G+ + + G P+ ET +IF AI+ G D + P
Sbjct: 176 GGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG--DPPTLP-S 232
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333
S A+D V K L+ P R + A++L HPW+ +A
Sbjct: 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 4e-26
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG +L K T Q FA K++ ++ DDVE E +++ H + L
Sbjct: 3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + ++ +M+ GG+L I + + A +++ + + HS G+++RDL
Sbjct: 63 CTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-RNYGAEADI 252
K +N L + D +K DFG+ GD G+ Y+APE+L + Y D
Sbjct: 123 KLDNILLDT---DGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-WPN-ISSSAKDIVKKMLHA 310
WS GV+LY +L G PF G E+ +F +I +P +P ++ AKDI+ K+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGHDEEELFQSIR------MDNPCYPRWLTREAKDILVKLFVR 233
Query: 311 DPKERLSA-AEVLNHPWMR 328
+P+ RL ++ HP+ R
Sbjct: 234 EPERRLGVKGDIRQHPFFR 252
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 5e-26
Identities = 78/270 (28%), Positives = 141/270 (52%), Gaps = 28/270 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-IVEL 133
+GRG FG +V K+T Q +A K ++ +++ R + R E ++ + G R I L
Sbjct: 9 IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN--GDRRWITNL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGV 189
A++D +++ L+MD GG+L +++K + +R ++ R +MV + H +G
Sbjct: 67 HYAFQDENNLYLVMDYYVGGDLLT-LLSK--FEDRLPEDMARFYLAEMVLAIDSVHQLGY 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL-VGSAYYVAPEVLRR--- 244
+HRD+KP+N L + ++ DFG + G V ++ VG+ Y++PE+L+
Sbjct: 124 VHRDIKPDNVLLDKNGH---IRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMED 180
Query: 245 ---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSS 299
YG E D WS GV +Y +L G PF+ E+ + I+ + H F D ++S
Sbjct: 181 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV-TDVSEE 239
Query: 300 AKDIVKKMLHADPKERL---SAAEVLNHPW 326
AKD++++++ P+ RL + +HP+
Sbjct: 240 AKDLIRRLI-CSPETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 8e-26
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 25/282 (8%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +GRG + LV K T++ +A K I + + +D++ V+ E + + H +V
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + +++ +GG+L + + E A ++ +++ H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
DLK +N L + + +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 121 DLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177
Query: 251 DIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAS 233
Query: 302 DIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL ++ +HP+ R +D D ++
Sbjct: 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQ 275
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 8e-26
Identities = 85/292 (29%), Positives = 125/292 (42%), Gaps = 53/292 (18%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T Q A K I R + E+ RE+ ++ L H
Sbjct: 7 KIGEGTYGVVYKGRNKKTGQIVAMKKI-------RLESEEEGVPSTAIREISLLKELQ-H 58
Query: 128 RNIVELKGAYEDRHSVNLI-----MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
NIV L+ + LI MDL + D + + + Q++ +
Sbjct: 59 PNIVCLQDVLMQESRLYLIFEFLSMDL---KKYLDSLPKGQYMDAELVKSYLYQILQGIL 115
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
+CHS V+HRDLKP+N L + +K DFGL+ F P V+ V + +Y APEV
Sbjct: 116 FCHSRRVLHRDLKPQNLLIDNKGV---IKLADFGLARAFGIPVRVYTHEVVTLWYRAPEV 172
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----- 294
L Y DIWS G I + + P F G++E I R + D WP
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232
Query: 295 --------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
N+ D+++KML DP +R+SA + LNHP+
Sbjct: 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 107 bits (267), Expect = 8e-26
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 9/244 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L +I G + E A ++ + + HS G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
K +N + S +K DFG+ G K G+ Y+APE++ + YG D
Sbjct: 128 KLDNVMLDSEGH---IKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHP 240
Query: 313 KERL 316
+RL
Sbjct: 241 GKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 9e-26
Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 41/267 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV KDT +A K + ++ ++ V +R E I+ +V++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMF 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D+ ++ LIM+ GG++ ++ K +E + V + H +G +HRD+
Sbjct: 68 YSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK---------------PGD-VFKDL-------- 230
KP+N L S +K +DFGL K P D F+++
Sbjct: 128 KPDNLLLDSKGH---VKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAET 184
Query: 231 ------------VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
VG+ Y+APEV + Y D WS GVI+Y +L G PPF ET Q
Sbjct: 185 WKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET 244
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIV 304
+ ++ P IS AKD++
Sbjct: 245 YKKVMNWKETLIFPPEVPISEKAKDLI 271
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 90/336 (26%), Positives = 134/336 (39%), Gaps = 65/336 (19%)
Query: 62 MEDVRNTYIF-GRELGRGQFGVTYLVTHKDTKQQFACK-----SISSRKLINRDDVEDV- 114
+ YI G LG G +G T + A K IS+ +R V
Sbjct: 3 SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCG 62
Query: 115 -----RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA 169
RE++IM+ + H NI+ L Y + +NL+MD+ A +L + K +E
Sbjct: 63 IHFTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQ 120
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+ Q++ ++ H MHRDL P N +S K DFGL+ +
Sbjct: 121 VKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI---CKIADFGLARRYGYPPYSDT 177
Query: 230 L---------------VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGE 272
L V + +Y APE+L Y D+WS G I LL+G P F GE
Sbjct: 178 LSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237
Query: 273 TE----QSIFDAILRG---------------HIDFS-------SDPWPNISSSAKDIVKK 306
E IF+ L G + +F+ +PN S A D+++
Sbjct: 238 NEIDQLGRIFE--LLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQS 295
Query: 307 MLHADPKERLSAAEVLNHPWMRVDG---DASDKPLD 339
+L +P ER+SA E L H + + D D S P +
Sbjct: 296 LLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFN 331
|
Length = 335 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-25
Identities = 99/322 (30%), Positives = 149/322 (46%), Gaps = 53/322 (16%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N Y +++G G+FG +LV HK T++ F K+IS R L R+ + V EV +M L
Sbjct: 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLV-IEVNVMRELK- 70
Query: 127 HRNIVELKGAYEDR------HSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCR 175
H+NIV Y DR + ++M+ C G+L R I K G E A ++ R
Sbjct: 71 HKNIVR----YIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDITR 125
Query: 176 QMVTVVHYCHSMG-------VMHRDLKPENFLFSS--------SAEDSPL------KATD 214
Q++ + YCH++ V+HRDLKP+N S+ +A+ + L K D
Sbjct: 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGD 185
Query: 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVL---RRNYGAEADIWSAGVILYILLSGVPPFWG 271
FGLS + VG+ YY +PE+L ++Y ++D+W+ G I+Y L SG PF
Sbjct: 186 FGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH------- 324
S + L+ D P S ++K +L+ KER SA + L +
Sbjct: 246 ANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302
Query: 325 -PWMRVDGDASDKPLDIAVLTR 345
P G A AV+ R
Sbjct: 303 PPVGAAGGGAGVAAAPGAVVAR 324
|
Length = 1021 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-25
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E+L H ++++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKI 275
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 88/316 (27%), Positives = 139/316 (43%), Gaps = 46/316 (14%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V + Y +G G +G T ++ A K +S R + + RE
Sbjct: 6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLS-RPFQSAIHAKRTYRE 64
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + ED V L+ L G +L + I+ S+
Sbjct: 65 LRLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NNIVKCQKLSDDHIQ 121
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS G++HRDLKP N + ED LK DFGL+ D V
Sbjct: 122 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLAR--HTDDEMTGYV 176
Query: 232 GSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL------- 282
+ +Y APE++ +Y DIWS G I+ LL+G F G I+
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPD 236
Query: 283 ------------RGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
R +I DF + + + A D+++KML DP +R++AAE
Sbjct: 237 EELLQKISSESARNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEA 295
Query: 322 LNHPWMRVDGDASDKP 337
L HP++ D D+P
Sbjct: 296 LAHPYLAEYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 46/288 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIMHHLTGHR 128
+LG G + Y ++ T + A K I D E+ RE+ +M L H
Sbjct: 7 KLGEGTYATVYKGRNRTTGEIVALKEI-------HLDAEEGTPSTAIREISLMKELK-HE 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
NIV L + + L+ + + D +G + Q++ + +CH
Sbjct: 59 NIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE 118
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--R 243
V+HRDLKP+N L + E LK DFGL+ F P + F + V + +Y AP+VL
Sbjct: 119 NRVLHRDLKPQNLLINKRGE---LKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS 175
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK-- 301
R Y DIWS G I+ +++G P F G + I R + WP IS +
Sbjct: 176 RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235
Query: 302 -----------------------DIVKKMLHADPKERLSAAEVLNHPW 326
D++ ++L +P+ R+SA + L HPW
Sbjct: 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + H G+++RDL
Sbjct: 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
K +N + S +K DFG+ G + G+ Y+APE++ + YG D
Sbjct: 128 KLDNVMLDSEGH---IKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PPF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHP 240
Query: 313 KERL 316
+RL
Sbjct: 241 SKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 6e-25
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E +I+ + R +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS-RFVVS 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ + GG+L I G+ + E+ A ++ + ++
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L ++ +D GL+V G+ + VG+ Y+APEV+ Y
Sbjct: 125 YRDLKPENILLDDRGH---IRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G ++Y ++ G PF E+ + + R + + S AK I + +L
Sbjct: 182 PDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLT 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
+PKERL AA V HP +
Sbjct: 242 KNPKERLGCRGNGAAGVKQHPIFK 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 6e-25
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 23/280 (8%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +GRG + LV K Q +A K + + + +D++ V+ E + + + +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + L+++ GG+L + + E A ++ +++ H G+++R
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
DLK +N L D +K TD+G+ PGD G+ Y+APE+LR YG
Sbjct: 121 DLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 251 DIWSAGVILYILLSGVPPF-------WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
D W+ GV+++ +++G PF TE +F IL I +S A +
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKASHV 233
Query: 304 VKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
+K L+ DPKERL +++ +H + R +D D +K
Sbjct: 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEK 273
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 7e-25
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 12/250 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++GRGQF Y T ++ A K + ++++ +D +E+ ++ L H N+++
Sbjct: 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIK 66
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMG 188
++ + + +N++++L G+L I K ER Q+ + V + HS
Sbjct: 67 YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLRRN-Y 246
VMHRD+KP N +++ +K D GL FF LVG+ YY++PE + N Y
Sbjct: 127 VMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGY 183
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWPNISSSAKDIVK 305
++DIWS G +LY + + PF+G+ + ++F + D+ P + S +++V
Sbjct: 184 NFKSDIWSLGCLLYEMAALQSPFYGD-KMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVS 242
Query: 306 KMLHADPKER 315
++ DP +R
Sbjct: 243 MCIYPDPDQR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-24
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 22/266 (8%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQIMHHLTGH 127
G+ LGRG FG YL DT ++ A K + S++ +V + E+Q++ +L H
Sbjct: 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE--TSKEVNALECEIQLLKNLR-H 63
Query: 128 RNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
IV+ G D +++ ++ GG + D++ A G +E RQ++ V Y H
Sbjct: 64 DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS----VFFKPGDVFKDLVGSAYYVAPEV 241
S ++HRD+K N L S+ +K DFG S G K + G+ Y+++PEV
Sbjct: 124 SNMIVHRDIKGANILRDSAGN---VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV 180
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSS 299
+ YG +AD+WS + +L+ PP W E E AI + + P +S +
Sbjct: 181 ISGEGYGRKADVWSVACTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTKPMLPDGVSDA 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHP 325
+D +K++ + K R +A +L HP
Sbjct: 238 CRDFLKQIFVEE-KRRPTAEFLLRHP 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-24
Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 143 VNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198
+ L++D G+L I ++ + E A L Q++ VH+ HS ++HRD+K N
Sbjct: 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN 173
Query: 199 FLFSSSAEDSPLKATDFGLSVFFK---PGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWS 254
L S + +K DFG S + DV + G+ YYVAPE+ RR Y +AD++S
Sbjct: 174 ILLCS---NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFS 230
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDIVKKMLHADPK 313
GV+LY LL+ PF GE + + L G DP P +IS ++IV +L +DPK
Sbjct: 231 LGVLLYELLTLKRPFDGENMEEVMHKTLAGRY----DPLPPSISPEMQEIVTALLSSDPK 286
Query: 314 ERLSAAEVLNHP 325
R S++++LN P
Sbjct: 287 RRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 1e-24
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 11/259 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++G G FG YL K + K I K+ ++ E ++EV ++ + H NIV
Sbjct: 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEK-EASKKEVILLAKMK-HPNIVT 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRI-IAKG-HYSERAAANLCRQMVTVVHYCHSMGVM 190
++++ + ++M+ C GG+L RI +G +SE + Q+ + + H ++
Sbjct: 64 FFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKIL 123
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-RNYGA 248
HRD+K +N S + + K DFG++ ++ VG+ YY++PE+ + R Y
Sbjct: 124 HRDIKSQNIFLSKNGMVA--KLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNN 181
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
+ DIWS G +LY L + PF G + I +G+ S PN S + ++ ++
Sbjct: 182 KTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS---PNFSRDLRSLISQLF 238
Query: 309 HADPKERLSAAEVLNHPWM 327
P++R S +L P++
Sbjct: 239 KVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 84/300 (28%), Positives = 129/300 (43%), Gaps = 52/300 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGHRNIVEL 133
+G G +G+ Y + + A K + RD + RE+ ++ +L H NIVEL
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALKKVRMDN--ERDGIPISSLREITLLLNLR-HPNIVEL 71
Query: 134 KGAYEDRH--SVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
K +H S+ L+M+ C L D + +SE L Q++ + Y H +
Sbjct: 72 KEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQYLHENFI 129
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL--RR 244
+HRDLK N L + LK DFGL+ + G K + V + +Y APE+L
Sbjct: 130 IHRDLKVSNLLLTDKGC---LKIADFGLARTY--GLPAKPMTPKVVTLWYRAPELLLGCT 184
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI--LRG----HI--DFSSDP---- 292
Y D+W+ G IL LL+ P G++E D I L G I FS P
Sbjct: 185 TYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK 244
Query: 293 --------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+P +S + ++ +L DPK+R +A E L + + +KPL
Sbjct: 245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK------EKPL 298
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 62/313 (19%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG LV KDT + +A K++ ++ +D + V+ E ++ + +V L
Sbjct: 9 IGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D + LIM+ GG+L +I +SE + V + H +G +HRD+
Sbjct: 68 YSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGD--VFKDL--------------------- 230
KP+N L +K +DFGLS F K D ++ L
Sbjct: 128 KPDNILIDR---GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSI 184
Query: 231 ------------------------VGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSG 265
VG+ Y+APE+ L++ YG E D WS G I++ L G
Sbjct: 185 NLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIG 244
Query: 266 VPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
PPF E + I+ R + F D ++S A+D++++++ + + RL A E
Sbjct: 245 WPPFCSENSHETYRKIINWRETLYFPDD--IHLSVEAEDLIRRLI-TNAENRLGRGGAHE 301
Query: 321 VLNHPWMR-VDGD 332
+ +HP+ R VD D
Sbjct: 302 IKSHPFFRGVDWD 314
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 26/278 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K + FA K++ ++ DDVE E +++ + + L
Sbjct: 3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + + +M+ GG+L I KG + A ++V + + HS G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-----LVGSAYYVAPEVLR-RNYGA 248
K +N + D +K DFG+ +VF D G+ Y+APE+L+ Y
Sbjct: 123 KLDNVMLD---RDGHIKIADFGMC----KENVFGDNRASTFCGTPDYIAPEILQGLKYTF 175
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-WPNISSSAKDIVKKM 307
D WS GV+LY +L G PF G+ E +F++I +D P W I+ +KDI++K+
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI---RVDTPHYPRW--ITKESKDILEKL 230
Query: 308 LHADPKERLS-AAEVLNHP------WMRVDGDASDKPL 338
DP RL + HP W ++ D P
Sbjct: 231 FERDPTRRLGVVGNIRGHPFFKTINWTALEKRELDPPF 268
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 91/326 (27%), Positives = 133/326 (40%), Gaps = 72/326 (22%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS--------RKLINRDDVEDV 114
DV Y +G G +G+ THK T + A K IS R L
Sbjct: 1 FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL--------- 51
Query: 115 RREVQIMHHLTGHRNIVELK-----GAYEDRHSVNLI---M--DLCAGGELFDRIIAKGH 164
RE++I+ H NI+ + ++E + V ++ M DL ++I H
Sbjct: 52 -REIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMETDLY-------KLIKTQH 102
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S Q++ + Y HS V+HRDLKP N L +++ + LK DFGL+ P
Sbjct: 103 LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD---LKICDFGLARIADPE 159
Query: 225 DVFK----DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG------- 271
+ V + +Y APE++ + Y DIWS G IL +LS P F G
Sbjct: 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL 219
Query: 272 ------------ETEQSIFDAILRGHID----FSSDPW----PNISSSAKDIVKKMLHAD 311
E I R +I PW PN A D++ KML +
Sbjct: 220 NLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKP 337
P +R++ E L HP++ D SD+P
Sbjct: 280 PHKRITVEEALAHPYLEQYHDPSDEP 305
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIV 131
++G G +G Y KDT + A K + +L N + + RE++I+ L HRNIV
Sbjct: 14 QIGEGTYGQVYKARDKDTGELVALKKV---RLDNEKEGFPITAIREIKILRQLN-HRNIV 69
Query: 132 ELKGAYEDRH-SVNLIMDLCAGGELFDR-------IIAKG--HYSERAAANLCRQMVTVV 181
LK D+ +++ D A +F+ ++ G H+SE + +Q++ +
Sbjct: 70 NLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV--FKDLVGSAYYVAP 239
+YCH +HRD+K N L ++ + +K DFGL+ + + + + V + +Y P
Sbjct: 130 NYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNSEESRPYTNKVITLWYRPP 186
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPN 295
E+L YG D+WS G IL L + P F E + + I R + S P WP+
Sbjct: 187 ELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR--LCGSPCPAVWPD 244
Query: 296 --------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
I + A D++ ML DP +R +A E LN PW+
Sbjct: 245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 3e-24
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 37/274 (13%)
Query: 70 IFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
G++LG G FG T + T+ + A K++ ++ + ++ E+ E IM L
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL--KEGASEEEREEFLEEASIMKKL- 58
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYC 184
H NIV L G + ++ + GG+L D + G + + + Q+ + Y
Sbjct: 59 SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYL 118
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------- 237
S +HRDL N L + E+ +K +DFGLS +D+ YY
Sbjct: 119 ESKNFVHRDLAARNCLVT---ENLVVKISDFGLS---------RDIYEDDYYRKRGGGKL 166
Query: 238 -----APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSS 290
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + + G+
Sbjct: 167 PIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYR---L 223
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
N +++ + DP++R + +E++
Sbjct: 224 PRPENCPDELYELMLQCWAYDPEDRPTFSELVED 257
|
Length = 258 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 4e-24
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +GV HK+TK+ A K + N + E RE++++ L NIVELK
Sbjct: 9 VGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLK-QENIVELK 66
Query: 135 GAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
A+ R + L+ + EL + + G E+ + + Q++ +H+CH ++HR
Sbjct: 67 EAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYI-YQLIKAIHWCHKNDIVHR 124
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLR-RNYGAE 249
D+KPEN L S + LK DFG + G + + V + +Y +PE+L YG
Sbjct: 125 DIKPENLLISH---NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKA 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETE------------------QSIFDAILRGH-IDFSS 290
D+WS G IL L G P F GE+E +F + R H + F +
Sbjct: 182 VDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA 241
Query: 291 DPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
P +S D++K +L +P +R + LNHP
Sbjct: 242 VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 4e-24
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 15/265 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y F R +G+G +G LV H+ +Q+ K ++ R R+ + +E Q++ L H
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRER-KAAEQEAQLLSQLK-HP 59
Query: 129 NIVELKGAYEDRHS-VNLIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCH 185
NIV + ++E + ++M C GG+L+ ++ KG E Q+ + Y H
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL-R 243
++HRDLK +N + + + +K D G++ V D+ L+G+ YY++PE+
Sbjct: 120 EKHILHRDLKTQNVFLTRT---NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN 176
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKD 302
+ Y ++D+W+ G +Y + + F + S+ I+ G + P P + S +
Sbjct: 177 KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL----PPMPKDYSPELGE 232
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++ ML P++R S +L P++
Sbjct: 233 LIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 4e-24
Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G +G+ Y T+ + A K I R + V+ + E+ + +L HRNIV+
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYL 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMH 191
G+ + + M+ GG L + +K +E+ +Q++ + Y H ++H
Sbjct: 72 GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLS---VFFKPGDVFKDLVGSAYYVAPEVL---RRN 245
RD+K +N L ++ + +K +DFG S P + G+ Y+APEV+ R
Sbjct: 132 RDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRG 187
Query: 246 YGAEADIWSAGVILYILLSGVPPFW--GETEQSIFD-AILRGHIDFSSDPWPNISSSAKD 302
YGA ADIWS G + + +G PPF GE + ++F + + H + +S+ AK+
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPES----LSAEAKN 243
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
+ + DP +R SA ++L P++
Sbjct: 244 FILRCFEPDPDKRASAHDLLQDPFL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 5e-24
Identities = 84/297 (28%), Positives = 120/297 (40%), Gaps = 66/297 (22%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGHR 128
+G G +GV Y K T + A K I R + ED RE+ ++ L H
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKI-------RLETEDEGVPSTAIREISLLKELN-HP 58
Query: 129 NIVELKGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
NIV L + + L+ MD L +I Y Q+
Sbjct: 59 NIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLY----------QL 108
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYY 236
+ + YCHS V+HRDLKP+N L + LK DFGL+ F P + V + +Y
Sbjct: 109 LQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRTYTHEVVTLWY 165
Query: 237 VAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI--------- 281
APE+L R Y DIWS G I +++ P F G++E IF +
Sbjct: 166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWP 225
Query: 282 -LRGHIDFSS-----------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ D+ PN+ D++ KML DP +R+SA L HP+
Sbjct: 226 GVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 7e-24
Identities = 85/318 (26%), Positives = 133/318 (41%), Gaps = 66/318 (20%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REV 118
P D + Y ++G+G FG + HK TKQ A K + + N + + RE+
Sbjct: 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKV---LMENEKEGFPITALREI 62
Query: 119 QIMHHLTGHRNIVEL--------KGAYEDRHSVNLIMDLC----AGGELFDRIIAKGHYS 166
+I+ L H N+V L + S L+ + C AG L K S
Sbjct: 63 KILQLLK-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAG--LLSNKNVKFTLS 119
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF----- 221
E + + ++ ++Y H ++HRD+K N L + +D LK DFGL+ F
Sbjct: 120 EIKK--VMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLARAFSLSKN 174
Query: 222 -KPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIF 278
KP + + + V + +Y PE+L R+YG D+W AG I+ + + P G TEQ
Sbjct: 175 SKP-NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL 233
Query: 279 DAI--LRGHIDFSSDPWPNI----------------------------SSSAKDIVKKML 308
I L G I + + WP + A D++ K+L
Sbjct: 234 TLISQLCGSI--TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLL 291
Query: 309 HADPKERLSAAEVLNHPW 326
DP +R+ A LNH +
Sbjct: 292 VLDPAKRIDADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 99.9 bits (249), Expect = 2e-23
Identities = 80/298 (26%), Positives = 123/298 (41%), Gaps = 66/298 (22%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 7 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELN-H 58
Query: 128 RNIVELKGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
NIV+L + + L+ MD + +I + Q
Sbjct: 59 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIK----------SYLFQ 108
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAY 235
++ + +CHS V+HRDLKP+N L + + +K DFGL+ F P + V + +
Sbjct: 109 LLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLW 165
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--GHIDFSSD 291
Y APE+L + Y DIWS G I +++ F G++E I R G D
Sbjct: 166 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 225
Query: 292 P--------------W---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P W P + +D++ +MLH DP +R+SA L HP+
Sbjct: 226 PGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 99.9 bits (249), Expect = 2e-23
Identities = 59/187 (31%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGD 225
+ + Q++ V +CH GVMHRDLKP+N L LK D GL F P
Sbjct: 109 AKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVK 166
Query: 226 VFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFD 279
+ + + +Y APEVL +Y DIWS G I + P F G++E IF
Sbjct: 167 SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFK 226
Query: 280 AI-------------LRGHIDFS-------SDPWPNISSSAKDIVKKMLHADPKERLSAA 319
+ LR +F S P++S D+++KML DP +R+SA
Sbjct: 227 LLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK 286
Query: 320 EVLNHPW 326
L HP+
Sbjct: 287 AALTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 99.2 bits (247), Expect = 2e-23
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSI---SSRKLINRDDVEDVRREVQIMHHLTGHR 128
G LG+G +G Y + Q A K + +S L + E ++ EV ++ L H
Sbjct: 5 GEVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HV 62
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+ G D +++++ M+ GG + + G E +Q++ V Y H+
Sbjct: 63 NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFG-------LSVFFKPGDVFKDLVGSAYYVAPEV 241
V+HRD+K N + + +K DFG + + ++ K + G+ Y++APEV
Sbjct: 123 VVHRDIKGNNVMLMPNG---IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ + YG ++DIWS G ++ + +G PP + I P + S++A
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLP-DSFSAAA 238
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWM 327
D V L D ER SA ++L H ++
Sbjct: 239 IDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 51/289 (17%)
Query: 96 ACKSISSRKLINRD--DVEDVRREVQIMHHLTGHRNIVELKGAY--------EDRHSVNL 145
K ++ +K++ D V+ RE++I+ L H NIV++ ED S+
Sbjct: 29 CDKRVAVKKIVLTDPQSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTEDVGSLTE 87
Query: 146 IMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201
+ + E + ++ +G SE A Q++ + Y HS V+HRDLKP N
Sbjct: 88 LNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147
Query: 202 SSSAEDSPLKATDFGLSVFFKP-----GDVFKDLVGSAYYVAPEVL--RRNYGAEADIWS 254
++ ED LK DFGL+ P G + + LV + +Y +P +L NY D+W+
Sbjct: 148 NT--EDLVLKIGDFGLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWA 204
Query: 255 AGVILYILLSGVPPFWGETE----QSIFDAI------------------LRGHIDFSSDP 292
AG I +L+G P F G E Q I +++ +R P
Sbjct: 205 AGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRP 264
Query: 293 W----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
P ++ A D ++++L +P +RL+A E L HP+M D+P
Sbjct: 265 LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEP 313
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 4e-23
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 19/256 (7%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM-HHLTG-HRNIVELKG 135
G+FG ++ HK T++ F K I ++ ++ M H L + N ++L
Sbjct: 27 GKFGKVSVLKHKPTQKLFVQKIIKAKNF----------NAIEPMVHQLMKDNPNFIKLYY 76
Query: 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLK 195
+ LIMD G+LFD + +G SE + RQ+V ++ H ++H D+K
Sbjct: 77 SVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK 136
Query: 196 PENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEADIWS 254
EN L+ + + + D+GL K G+ Y +PE + NY D W+
Sbjct: 137 LENVLYDRAKDR--IYLCDYGLC---KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWA 191
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
GV+ Y LL+G PF + ++ + L N+S +A D V+ ML +
Sbjct: 192 VGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINY 251
Query: 315 RLSA-AEVLNHPWMRV 329
RL+ E++ HP++++
Sbjct: 252 RLTNYNEIIKHPFLKI 267
|
Length = 267 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 99.4 bits (247), Expect = 4e-23
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y T + A K +S + + +D+ +EV+ + + H N +E
Sbjct: 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIE 89
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
KG Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 90 YKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 149
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L + E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 150 DIKAGNILLT---EPGQVKLADFGSASIASPANSF---VGTPYWMAPEVILAMDEGQYDG 203
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-DFSSDPWPNISSSAKDIVKKM 307
+ D+WS G+ L PP + S I + S+ W S ++ V
Sbjct: 204 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---SDYFRNFVDSC 260
Query: 308 LHADPKERLSAAEVLNH 324
L P++R ++ E+L H
Sbjct: 261 LQKIPQDRPTSEELLKH 277
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 98.1 bits (244), Expect = 5e-23
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 30/266 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG V K+T + +ACK + ++L + + E +I+ + IV L
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLA 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC---------- 184
A+E + + L+M L GG+L I + ER +M V+HY
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHIY---NVGERGL-----EMERVIHYSAQITCGILHL 111
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
HSM +++RD+KPEN L + +D GL+V K G G+ Y+APE+L+
Sbjct: 112 HSMDIVYRDMKPENVLLDDQGN---CRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE 168
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR----GHIDFSSDPWPNISSS 299
Y D ++ G +Y +++G PF E+ + + R + F N +
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFTEE 225
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHP 325
+KDI + L P++RL + E + P
Sbjct: 226 SKDICRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 1e-22
Identities = 85/310 (27%), Positives = 129/310 (41%), Gaps = 81/310 (26%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
++LG+G +G+ + + TK+ A K I + R N D + RE+ + L H NI
Sbjct: 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR---NATDAQRTFREIMFLQELGDHPNI 69
Query: 131 VELKGAYE----------------DRHSV---NLIMDLCAGGELFDRIIAKGHYSERAAA 171
V+L + D H+V N++ D+ R I Y
Sbjct: 70 VKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDV------HKRYIM---Y------ 114
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD------ 225
Q++ + Y HS V+HRDLKP N L +S D +K DFGL+ +
Sbjct: 115 ----QLLKALKYIHSGNVIHRDLKPSNILLNS---DCRVKLADFGLARSLSELEENPENP 167
Query: 226 VFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG------------ 271
V D V + +Y APE+L Y D+WS G IL +L G P F G
Sbjct: 168 VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIE 227
Query: 272 --------ETEQ-------SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL 316
+ E ++ D++ + P S A D++KK+L +P +RL
Sbjct: 228 VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL 287
Query: 317 SAAEVLNHPW 326
+A E L HP+
Sbjct: 288 TAEEALEHPY 297
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 1e-22
Identities = 84/305 (27%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y + T + A K I R + ED RE+ ++ + H
Sbjct: 9 KIGEGTYGVVYKARDRVTNETIALKKI-------RLEQEDEGVPSTAIREISLLKEMQ-H 60
Query: 128 RNIVELKGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
NIV L+ + L+ MD R+I Y Q
Sbjct: 61 GNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLY----------Q 110
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAY 235
++ + YCHS V+HRDLKP+N L + LK DFGL+ F P F V + +
Sbjct: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIPVRTFTHEVVTLW 168
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y APE+L R+Y DIWS G I +++ P F G++E I R + + W
Sbjct: 169 YRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228
Query: 294 PNISS-------------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P ++S + D++ KML DP +R++A L H + +
Sbjct: 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288
Query: 329 VDGDA 333
GDA
Sbjct: 289 DLGDA 293
|
Length = 294 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 2e-22
Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 46/288 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
++G G +G + +++T + A K + DD E V RE+ ++ L H+N
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALKRVRLD-----DDDEGVPSSALREICLLKELK-HKN 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
IV L + L+ + C + FD G + Q++ + +CHS
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSH 118
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL--RR 244
V+HRDLKP+N L + + E LK DFGL+ F P + V + +Y P+VL +
Sbjct: 119 NVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 175
Query: 245 NYGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS------ 297
Y D+WSAG I L +G P F G I R + + WP +S
Sbjct: 176 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235
Query: 298 -------------------SSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S+ +D+++ +L +P +R+SA E L HP+
Sbjct: 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 2e-22
Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 33/280 (11%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P ED + + +G G +G Y + +T + A K I KL +D V++E+ I
Sbjct: 7 PQED----FELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEI-I 58
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
M H NIV G+Y R + + M+ C GG L D G SE A + R+ +
Sbjct: 59 MMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQG 118
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAP 239
++Y HS G MHRD+K N L + ++ +K DFG+S K +G+ Y++AP
Sbjct: 119 LYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAP 175
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG---------ETEQSIFDAILRGHI 286
EV + Y DIW+ G+ L PP + T+ + L+ +
Sbjct: 176 EVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKM 235
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
W N S VK L +PK+R +A ++L HP+
Sbjct: 236 K-----WSN---SFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 3e-22
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 14/251 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++GRGQF Y T A K + L++ D +E+ ++ L H N+++
Sbjct: 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIK 66
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII-----AKGHYSERAAANLCRQMVTVVHYCHSM 187
++ + + +N++++L G+L R+I K E+ Q+ + + + HS
Sbjct: 67 YYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR 125
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLRRN- 245
VMHRD+KP N +++ +K D GL FF LVG+ YY++PE + N
Sbjct: 126 RVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 182
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWPNISSSAKDIV 304
Y ++DIWS G +LY + + PF+G+ + +++ + D+ P + S + +V
Sbjct: 183 YNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 241
Query: 305 KKMLHADPKER 315
++ DP++R
Sbjct: 242 NMCINPDPEKR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 4e-22
Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 31/299 (10%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y + A K +S + + +D+ +EV+ + L H N ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+G Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L S E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 140 DVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-FSSDPWPNISSSAKDIVKKM 307
+ D+WS G+ L PP + S I + S W S ++ V
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPLDI--AVLTRMK---------QFRAMNKL 355
L P++R ++ +L H ++ ++P + ++ R K Q+R M K+
Sbjct: 251 LQKIPQDRPTSEVLLKHRFVL-----RERPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.9 bits (237), Expect = 4e-22
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 52/282 (18%)
Query: 73 RELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
++LG G FG Y L + A K++ + ++ +D +E ++M L GH N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA--SEEERKDFLKEARVMKKL-GHPN 57
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------------AANLCRQ 176
+V L G + + L+++ GG+L D + A + +
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
M Y S +HRDL N L ED +K +DFGLS +D+ YY
Sbjct: 118 M----EYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLS---------RDVYDDDYY 161
Query: 237 V------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + +
Sbjct: 162 RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR 221
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+G+ P +++ DP++R + +E++
Sbjct: 222 KGY--RLPKP-EYCPDELYELMLSCWQLDPEDRPTFSELVER 260
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 96.2 bits (239), Expect = 7e-22
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 28/251 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVEL 133
+GRG FG +V K T++ +A K ++ +++ R + R E ++ + G + I L
Sbjct: 9 IGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL--VNGDCQWITTL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGV 189
A++D + + L+MD GG+L +++K + +R ++ R +MV +H H +
Sbjct: 67 HYAFQDENYLYLVMDYYVGGDLLT-LLSK--FEDRLPEDMARFYIAEMVLAIHSIHQLHY 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRR--- 244
+HRD+KP+N L + ++ DFG + + G V + VG+ Y++PE+L+
Sbjct: 124 VHRDIKPDNVLLDMNGH---IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMED 180
Query: 245 ---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----NIS 297
YG E D WS GV +Y +L G PF+ E+ + I+ F +P ++S
Sbjct: 181 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHITDVS 237
Query: 298 SSAKDIVKKML 308
AKD++++++
Sbjct: 238 EEAKDLIQRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 1e-21
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 26/250 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +V K+ + FA K ++ +++ R + R E ++ + ++ I L
Sbjct: 9 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDNQWITTLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVM 190
A++D +++ L+MD GG+L + + +R ++ R +MV + H + +
Sbjct: 68 YAFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVL------ 242
HRD+KP+N L + ++ DFG + + G V + VG+ Y++PE+L
Sbjct: 125 HRDIKPDNILMDMNGH---IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----NISS 298
+ YG E D WS GV +Y +L G PF+ E+ + I+ F +P ++S
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPAQVTDVSE 238
Query: 299 SAKDIVKKML 308
AKD++++++
Sbjct: 239 DAKDLIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 83/315 (26%), Positives = 125/315 (39%), Gaps = 72/315 (22%)
Query: 76 GRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
GRG +G Y K+ +++A K K + + RE+ ++ L H N
Sbjct: 9 GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDK----EQYTGISQSACREIALLRELK-HEN 63
Query: 130 IVELKGAYEDRH--SVNLIMDLCAGGELFDRIIAKGHYSERAAA-------NLCRQMVTV 180
+V L + + SV L+ D A +L+ I K H + + +L Q++
Sbjct: 64 VVSLVEVFLEHADKSVYLLFDY-AEHDLWQ--IIKFHRQAKRVSIPPSMVKSLLWQILNG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLS-VFFKPGDVFKDL---VGSAY 235
VHY HS V+HRDLKP N L E +K D GL+ +F P DL V + +
Sbjct: 121 VHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIW 180
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE-------------QSIF-- 278
Y APE+L R+Y DIW+ G I LL+ P F G + IF
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240
Query: 279 ----------------------DAILRGHIDFSS-----DPWPNISSSAKDIVKKMLHAD 311
+S + S D+++K+L D
Sbjct: 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYD 300
Query: 312 PKERLSAAEVLNHPW 326
P +R++A E L HP+
Sbjct: 301 PTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 3e-21
Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 48/294 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHR 128
+LG G G V H T ++ ++K+++ VR RE+QIMH
Sbjct: 11 SDLGAGNGGSVSKVKHIPTG------TVMAKKVVHIGAKSSVRKQILRELQIMHECRSP- 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMV---TVVHYC 184
IV GA+ + +++ + M+ G L DRI K G + +V T ++
Sbjct: 64 YIVSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPGDVFKDLVGSAYYVAPEVL 242
H +MHRD+KP N L +S + +K DFG+S + D F VG++ Y++PE +
Sbjct: 123 HR--IMHRDIKPSNILVNSRGQ---IKLCDFGVSGELINSIADTF---VGTSTYMSPERI 174
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPF-------WGETEQ-SIFDAILRGHIDFSSDPW 293
+ Y ++D+WS G+ + L G PF G+ + I D + + +P
Sbjct: 175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ----IVQEPP 230
Query: 294 PNISSS-----AKDIVKKMLHADPKERLSAAEVL-NHPWMRVDGDASDKPLDIA 341
P + SS +D V L DP ER + ++ P+++ +D+
Sbjct: 231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL---RASNVDLQ 281
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 4e-21
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 18/212 (8%)
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGH--YSERAAANLCRQMVTVVH 182
H IV+ ++ + LIM+ +GG+L +I K H + E L Q+V +
Sbjct: 124 HFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALD 183
Query: 183 YCHSMGVMHRDLKPEN-FLFSSSAEDSPLKATDFGLSVFFKPG---DVFKDLVGSAYYVA 238
HS +MHRDLK N FL + +K DFG S + DV G+ YY+A
Sbjct: 184 EVHSRKMMHRDLKSANIFLMPTGI----IKLGDFGFSKQYSDSVSLDVASSFCGTPYYLA 239
Query: 239 PEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NI 296
PE+ R+ Y +AD+WS GVILY LL+ PF G +++ I +L G DP+P +
Sbjct: 240 PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY----DPFPCPV 295
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
SS K ++ +L +P R + ++L+ +++
Sbjct: 296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327
|
Length = 478 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 92.8 bits (230), Expect = 4e-21
Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 16/257 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG Y TK+ A K I + D++ED+++E+ ++ I
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY-ITRYY 68
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD+
Sbjct: 69 GSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADI 252
K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y +ADI
Sbjct: 128 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADI 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSSAKDIVKKMLHA 310
WS G+ L G PP + I + +S P S K+ V+ L+
Sbjct: 185 WSLGITAIELAKGEPPNSDLHPMRVLFLIPK-----NSPPTLEGQYSKPFKEFVEACLNK 239
Query: 311 DPKERLSAAEVLNHPWM 327
DP+ R +A E+L H ++
Sbjct: 240 DPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 5e-21
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG + T + +ACK ++ ++L R E E +I+ + R IV L
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLA 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVHYCHSMGVM 190
A++ + + L+M + GG+L I + E A Q+++ + + H ++
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGSAYYVAPEVLR-RNYGA 248
+RDLKPEN L D ++ +D GL+V K G K G+ ++APE+L+ Y
Sbjct: 120 YRDLKPENVLLD---NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 249 EADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
D ++ GV LY +++ PF E + + IL + + S ++K
Sbjct: 177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPD----KFSPASKSFC 232
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
+ +L DP++RL + + HP R
Sbjct: 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFR 261
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.7 bits (230), Expect = 1e-20
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 59/322 (18%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+ K + ++ Y +++G G +G K T ++ A K +S R + + RE
Sbjct: 6 VNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLS-RPFQSEIFAKRAYRE 64
Query: 118 VQIMHHLTGHRNIVEL------KGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYS 166
+ ++ H+ H N++ L + ++ L+M DL + I S
Sbjct: 65 LTLLKHMQ-HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDL--------QKIMGHPLS 115
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
E L QM+ + Y HS G++HRDLKP N + ED LK DFGL+ + D
Sbjct: 116 EDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLA---RHADA 169
Query: 227 -FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWG------------ 271
V + +Y APEV+ +Y DIWS G I+ +L+G F G
Sbjct: 170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 229
Query: 272 -------ETEQSIFDAILRGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKER 315
E Q + D + +I DFS+ +P S A D+++KML D +R
Sbjct: 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKR 288
Query: 316 LSAAEVLNHPWMRVDGDASDKP 337
L+A E L HP+ DA ++
Sbjct: 289 LTATEALEHPYFDSFRDADEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 74/316 (23%), Positives = 122/316 (38%), Gaps = 73/316 (23%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE----DVRREVQIMHHL 124
Y +LG G FG Y T + A K K++ ++ + RE++I+ L
Sbjct: 10 YEILGKLGEGTFGEVYKARQIKTGRVVALK-----KILMHNEKDGFPITALREIKILKKL 64
Query: 125 TGHRNIVEL--------KGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAA 171
H N+V L + R SV ++ DL G L + + +E
Sbjct: 65 K-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLENPSV---KLTESQIK 118
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFK-- 228
Q++ ++Y H ++HRD+K N L + LK DFGL+ + P K
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAANILIDNQGI---LKIADFGLARPYDGPPPNPKGG 175
Query: 229 ---------DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--- 274
+LV + +Y PE+L R Y DIW G + + + P G+++
Sbjct: 176 GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ 235
Query: 275 -QSIFDAI----------------LRGHIDFSSDPWPNISSSAK-------DIVKKMLHA 310
IF G F++ P + D++ K+L
Sbjct: 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP-RTLEERFGKLGPEGLDLLSKLLSL 294
Query: 311 DPKERLSAAEVLNHPW 326
DP +RL+A++ L HP+
Sbjct: 295 DPYKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 90.9 bits (225), Expect = 2e-20
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G +G Y + T + A K I KL DD +++E+ ++ H NIV
Sbjct: 15 QRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEIFMVKECK-HCNIVA 70
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y R + + M+ C GG L D G SE A +CR+ + + Y HS G MHR
Sbjct: 71 YFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHR 130
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEV--LRRN--YG 247
D+K N L + + + +K DFG++ K +G+ Y++APEV + +N Y
Sbjct: 131 DIKGANILLTDNGD---VKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYN 187
Query: 248 AEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNI------SSSA 300
DIW+ G+ L PP + +++F L +F P + SS+
Sbjct: 188 QLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQP---PKLKDKTKWSSTF 241
Query: 301 KDIVKKMLHADPKERLSAAEVLNH 324
+ VK L +PK+R +A +L H
Sbjct: 242 HNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 2e-20
Identities = 83/291 (28%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG--HRNI 130
E+G G +G Y + A KS+ R N D + REV ++ L H NI
Sbjct: 7 EIGVGAYGTVYKARDPHSGHFVALKSV--RVQTNEDGLPLSTVREVALLKRLEAFDHPNI 64
Query: 131 VEL----KGAYEDRHS-VNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
V L + DR + V L+ DL D++ G +E +L RQ +
Sbjct: 65 VRLMDVCATSRTDRETKVTLVFEHVDQDLRT---YLDKVPPPGLPAETIK-DLMRQFLRG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ + H+ ++HRDLKPEN L +S + +K DFGL+ + +V + +Y APE
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQ---VKLADFGLARIYSCQMALTPVVVTLWYRAPE 177
Query: 241 V-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAI------------LR 283
V L+ Y D+WS G I + P F G +E IFD I
Sbjct: 178 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237
Query: 284 GHIDFS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
FS P I S ++ +ML +P +R+SA L HP+
Sbjct: 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 2e-20
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG + T+Q A K I + D++ED+++E+ ++ + +
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY-VTKYY 68
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G+Y + +IM+ GG D ++ G + E A + ++++ + Y HS +HRD+
Sbjct: 69 GSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADI 252
K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++ADI
Sbjct: 128 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW--PNISSSAKDIVKKMLHA 310
WS G+ L G PP + + I ++ P S K+ + L+
Sbjct: 185 WSLGITAIELAKGEPP-----NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNK 239
Query: 311 DPKERLSAAEVLNHPWM 327
DP R +A E+L H ++
Sbjct: 240 DPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 4e-20
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G FG + T++ A K I + D++ED+++E+ ++ + +
Sbjct: 11 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY-VTKY 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD
Sbjct: 68 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 126
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEAD 251
+K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++AD
Sbjct: 127 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 183
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+ L G PP + I + + N S K+ V+ L+ +
Sbjct: 184 IWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEACLNKE 240
Query: 312 PKERLSAAEVLNHPWM 327
P R +A E+L H ++
Sbjct: 241 PSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 7e-20
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 34/273 (12%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +G Y H T Q A K + + D+ E++++E+ ++ + HRNI
Sbjct: 14 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHRNIATYY 69
Query: 135 GAYEDRH------SVNLIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCHS 186
GA+ ++ + L+M+ C G + D I KG+ E A +CR+++ + + H
Sbjct: 70 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR-- 243
V+HRD+K +N L + +AE +K DFG+S + +G+ Y++APEV+
Sbjct: 130 HKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 186
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
Y ++D+WS G+ + G PP I R +P P + S
Sbjct: 187 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-------NPAPRLKSK 239
Query: 300 A-----KDIVKKMLHADPKERLSAAEVLNHPWM 327
+ ++ L + +R + +++ HP++
Sbjct: 240 KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 8e-20
Identities = 74/273 (27%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 71 FGRELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVE----DVRREVQIMH 122
F ++LG G FG L + +T +Q A KS+ N E D RE++I+
Sbjct: 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL------NHSGEEQHRSDFEREIEILR 61
Query: 123 HLTGHRNIVELKGAYEDRH--SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR---QM 177
L H NIV+ KG E S+ LIM+ G L R + H + L Q+
Sbjct: 62 TLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRDQINLKRLLLFSSQI 118
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGS- 233
+ Y S +HRDL N L S + +K +DFGL+ K+ S
Sbjct: 119 CKGMDYLGSQRYIHRDLAARNILVES---EDLVKISDFGLAKVLPEDKDYYYVKEPGESP 175
Query: 234 AYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
++ APE LR + + +D+WS GV LY L + + D S P
Sbjct: 176 IFWYAPECLRTSKFSSASDVWSFGVTLYELFT--------------------YGDPSQSP 215
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+M+ E L E L P
Sbjct: 216 PAEFLRMIGIAQGQMIVTRLLELLKEGERLPRP 248
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 2e-19
Identities = 85/303 (28%), Positives = 123/303 (40%), Gaps = 78/303 (25%)
Query: 91 TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150
T Q A K +S R N + RE+ +M L H+NI+ L + + S+ D+
Sbjct: 40 TGQNVAIKKLS-RPFQNVTHAKRAYRELVLMK-LVNHKNIIGLLNVFTPQKSLEEFQDVY 97
Query: 151 AGGELFDRIIAKGHYSERAAANLCR----------------QMVTVVHYCHSMGVMHRDL 194
EL D ANLC+ QM+ + + HS G++HRDL
Sbjct: 98 LVMELMD-------------ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDL 144
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--KDLVGSAYYVAPEV-LRRNYGAEAD 251
KP N + S D LK DFGL+ G F V + YY APEV L Y D
Sbjct: 145 KPSNIVVKS---DCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 199
Query: 252 IWSAGVILYILLSGVPPF--------W-------GETEQSIFDAI---LRGHID------ 287
IWS G I+ ++ G F W G + +R +++
Sbjct: 200 IWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYA 259
Query: 288 -------FSSDPWPNISSS--------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332
F +P S S A+D++ KML DP++R+S + L HP++ V D
Sbjct: 260 GYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319
Query: 333 ASD 335
S+
Sbjct: 320 PSE 322
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 2e-19
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 53/306 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G +GV T ++ A K I+ + D + RE++++ L H +IVE+K
Sbjct: 8 IGKGSYGVVCSAIDTHTGEKVAIKKIND-VFEHVSDATRILREIKLLRLLR-HPDIVEIK 65
Query: 135 G--------AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
++D + V +M+ +L I A + Q++ + Y H+
Sbjct: 66 HIMLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT 121
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFK--PGDVF-KDLVGSAYYVAPEV- 241
V HRDLKP+N L ++ D LK DFGL+ V F P +F D V + +Y APE+
Sbjct: 122 ANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 178
Query: 242 --LRRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIFDA 280
Y DIWS G I +L+G P F G ET + +
Sbjct: 179 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE 238
Query: 281 ILRGH---------IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
R + + FS +PN A +++++L DPK+R +A E L P+ +
Sbjct: 239 KARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297
Query: 332 DASDKP 337
+P
Sbjct: 298 KVEREP 303
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 2e-19
Identities = 85/315 (26%), Positives = 134/315 (42%), Gaps = 44/315 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G +Q+ A K +S R + RE
Sbjct: 6 LNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLS-RPFQSLIHARRTYRE 64
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ +L G +L + I+ S+
Sbjct: 65 LRLLKHMK-HENVIGLLDVFTPATSIENFNEVYLVTNL-MGADL-NNIVKCQKLSDEHVQ 121
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS G++HRDLKP N + ED L+ DFGL+ + D V
Sbjct: 122 FLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLAR--QADDEMTGYV 176
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL G F G I+ S
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
+ ISS A D+++KML D +R+SA+E L
Sbjct: 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL 296
Query: 323 NHPWMRVDGDASDKP 337
HP+ D D+P
Sbjct: 297 AHPYFSQYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 2e-19
Identities = 85/324 (26%), Positives = 131/324 (40%), Gaps = 66/324 (20%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS---------RKLINRDDVEDV 114
DV + Y +G G +GV + ++ A K I R L
Sbjct: 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL--------- 52
Query: 115 RREVQIMHHLTGHRNIVELKGAY----EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
RE++I+ H H NI+ ++ D V ++MDL +L I + +E
Sbjct: 53 -RELKILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDL-MESDLHHIIHSDQPLTEEHI 109
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL--SVFFKPGDV-- 226
Q++ + Y HS V+HRDLKP N L + E L+ DFG+ + P +
Sbjct: 110 RYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCE---LRIGDFGMARGLSSSPTEHKY 166
Query: 227 -FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVI-------------------LYILLS 264
+ V + +Y APE+L Y D+WS G I L ++LS
Sbjct: 167 FMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILS 226
Query: 265 --GVPPFWGETEQSIFDAILRGHI-DFSSD---PW----PNISSSAKDIVKKMLHADPKE 314
G P E I +R +I + PW P S A D++ +ML DP+E
Sbjct: 227 VLGSPS--EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEE 284
Query: 315 RLSAAEVLNHPWMRVDGDASDKPL 338
R++ + L HP++ D D+P
Sbjct: 285 RITVEQALQHPFLAQYHDPDDEPT 308
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 85/313 (27%), Positives = 122/313 (38%), Gaps = 82/313 (26%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLT 125
TY +LG G + Y K T Q A K I + ++ RE ++ L
Sbjct: 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIR----LEHEEGAPFTAIREASLLKDLK 61
Query: 126 GHRNIVELKGAYEDRHSVNLI-----------MDLCAGG------ELFDRIIAKGHYSER 168
H NIV L + ++ L+ MD C GG LF
Sbjct: 62 -HANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLF------------ 108
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL----SVFFKPG 224
Q++ + YCH V+HRDLKP+N L S E LK DFGL SV P
Sbjct: 109 -----LFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSV---PS 157
Query: 225 DVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAI 281
+ + V + +Y P+VL Y D+W G I Y + +G P F G T+ + I
Sbjct: 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI 217
Query: 282 LRGHIDFSSDPWPNISS----------------------------SAKDIVKKMLHADPK 313
R + + WP +SS +++ K L +PK
Sbjct: 218 FRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPK 277
Query: 314 ERLSAAEVLNHPW 326
+R+SAAE + HP+
Sbjct: 278 KRISAAEAMKHPY 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 1e-18
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +G Y H T Q A K + + D+ E+++ E+ ++ + HRNI
Sbjct: 24 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINMLKKYSHHRNIATYY 79
Query: 135 GAYEDRHSVN------LIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCHS 186
GA+ + L+M+ C G + D + KG+ E A +CR+++ + + H+
Sbjct: 80 GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA 139
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-- 243
V+HRD+K +N L + +AE +K DFG+S ++ +G+ Y++APEV+
Sbjct: 140 HKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 196
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPF 269
Y +DIWS G+ + G PP
Sbjct: 197 ENPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 1e-18
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 24/268 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN---IV 131
+GRG FG Y DT + +A K + +K I E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ A+ ++ I+DL GG+L + G +SE +++ + + H+ V++
Sbjct: 61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFF---KPGDVFKDLVGSAYYVAPEVLRRN--Y 246
RDLKP N L E ++ +D GL+ F KP VG+ Y+APEVL++ Y
Sbjct: 121 RDLKPANILLD---EHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAY 173
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
+ AD +S G +L+ LL G PF + + I R + + + P+ S + +++
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVE-LPDSFSPELRSLLE 231
Query: 306 KMLHADPKERL-----SAAEVLNHPWMR 328
+L D RL A EV HP+ R
Sbjct: 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFR 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 2e-18
Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 49/301 (16%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TYI +LG G + Y K T A K I +L + + REV ++ L
Sbjct: 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK- 62
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANL-CRQMVTV 180
H NIV L S+ L+ E D+ + + G+ L Q++
Sbjct: 63 HANIVTLHDIIHTEKSLTLVF------EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRG 116
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAP 239
++YCH V+HRDLKP+N L + E LK DFGL+ P + + V + +Y P
Sbjct: 117 LNYCHRRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYSNEVVTLWYRPP 173
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
++L +Y + D+W G I Y + +G P F G T + I R + + WP I
Sbjct: 174 DILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233
Query: 298 SSAK--------------------------DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
S+ + +++ K+L + ++R+SA E + HP+ G
Sbjct: 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293
Query: 332 D 332
+
Sbjct: 294 E 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 85.9 bits (212), Expect = 2e-18
Identities = 78/282 (27%), Positives = 121/282 (42%), Gaps = 52/282 (18%)
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---- 157
SR N+ + RE+ ++ H+NI+ L + + S+ D+ EL D
Sbjct: 55 SRPFQNQTHAKRAYREL-VLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLC 113
Query: 158 RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
++I ER + L QM+ + + HS G++HRDLKP N + S D LK DFGL
Sbjct: 114 QVIHMELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGL 169
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
+ + V + YY APEV L Y DIWS G I+ L+ G F G
Sbjct: 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 229
Query: 277 IFDAIL------------------RGHIDFSSDPWPNIS--------------------- 297
++ ++ R +++ + +P IS
Sbjct: 230 QWNKVIEQLGTPSAEFMNRLQPTVRNYVE-NRPQYPGISFEELFPDWIFPSESERDKLKT 288
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV--DGDASDKP 337
S A+D++ KML DP +R+S E L HP++ V D ++ P
Sbjct: 289 SQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAP 330
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 3e-18
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
L+E F+ D D GTI+ +ELKA L LG LSE E+ +++ D DG+G ID+ EF+
Sbjct: 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 4e-18
Identities = 72/271 (26%), Positives = 113/271 (41%), Gaps = 31/271 (11%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+G G G Y + K T A K + R+ N+++ + + ++ ++ IV+
Sbjct: 22 EIGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKEENKRILMDLDVVLKSHDCPYIVKC 79
Query: 134 KGAYEDRHSVNLIMDL---CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC-HSMGV 189
G + V + M+L C +L RI +G E + +V +HY GV
Sbjct: 80 YGYFITDSDVFICMELMSTCLD-KLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKHGV 136
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-----RR 244
+HRD+KP N L +S +K DFG+S G A Y+APE +
Sbjct: 137 IHRDVKPSNILLDASGN---VKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNP 193
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP------NIS 297
Y AD+WS G+ L L +G P+ +TE + IL + P S
Sbjct: 194 KYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL-------QEEPPSLPPNEGFS 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
V L D ++R E+L HP++R
Sbjct: 247 PDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 1e-17
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +ELG GQFGV +L + K A K I + D +E E ++M L+ H N+
Sbjct: 8 FLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIE----EAKVMMKLS-HPNL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G + + ++ + A G L + + KG ++C + + Y S G
Sbjct: 62 VQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLRRN- 245
+HRDL N L ED+ +K +DFGL+ + D + G+ + V PEV +
Sbjct: 122 IHRDLAARNCLVG---EDNVVKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPPEVFDYSR 177
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS-SAKDI 303
+ +++D+WS GV+++ + S G P+ + + +++ G+ P ++ I
Sbjct: 178 FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR----LYRPKLAPTEVYTI 233
Query: 304 VKKMLHADPKER 315
+ H P++R
Sbjct: 234 MYSCWHEKPEDR 245
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 83.1 bits (205), Expect = 2e-17
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 46/314 (14%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K + +V + Y +++G G +G + T + A K + R + + RE++
Sbjct: 8 KTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLY-RPFQSELFAKRAYRELR 66
Query: 120 IMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
++ H+ H N++ L + + H L+M G +++ SE L
Sbjct: 67 LLKHMK-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFL 123
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
QM+ + Y H+ G++HRDLKP N + ED LK DFGL+ + V +
Sbjct: 124 VYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLAR--QTDSEMTGYVVT 178
Query: 234 AYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGE--------------TEQSI 277
+Y APEV+ +Y DIWS G I+ +L+G P F G T
Sbjct: 179 RWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238
Query: 278 FDAIL-----RGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
F L + ++ DF S PN + A ++++KML D + R++AAE L
Sbjct: 239 FVQKLQSEDAKNYVKKLPRFRKKDFRS-LLPNANPLAVNVLEKMLVLDAESRITAAEALA 297
Query: 324 HPWMRVDGDASDKP 337
HP+ D D+
Sbjct: 298 HPYFEEFHDPEDET 311
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 82.7 bits (204), Expect = 2e-17
Identities = 80/300 (26%), Positives = 123/300 (41%), Gaps = 49/300 (16%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TYI +LG G + + K T+ A K I +L + + REV ++ L
Sbjct: 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKDLK- 62
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTV 180
H NIV L S+ L+ E D+ + + S Q++
Sbjct: 63 HANIVTLHDIVHTDKSLTLVF------EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRG 116
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ YCH V+HRDLKP+N L + E LK DFGL+ P + + V + +Y P
Sbjct: 117 LAYCHRRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTYSNEVVTLWYRPP 173
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
+VL Y + D+W G I + + SG P F G T + I R + + WP IS
Sbjct: 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233
Query: 298 SSAK--------------------------DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
S+ + +++ K L + K+R+SA E + H + R G
Sbjct: 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 2e-17
Identities = 84/311 (27%), Positives = 129/311 (41%), Gaps = 59/311 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSGV----------------------------------- 266
DIWS G I+ +L G
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 267 PPFWGETEQSIFDAILRGHIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
P + G + + +F +L F +D N +S A+D++ KML D +R+S E L H
Sbjct: 264 PKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 325 PWMRVDGDASD 335
P++ V D S+
Sbjct: 319 PYINVWYDPSE 329
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 81.1 bits (200), Expect = 3e-17
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+E+G GQFG+ +L + K++ A K+I + ED E Q+M L+ H +
Sbjct: 8 LVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSE----EDFIEEAQVMMKLS-HPKL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G +R + L+ + G L D + A +G +S+ +C + + Y S V
Sbjct: 62 VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + V +PEV
Sbjct: 122 IHRDLAARNCLVG---ENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVFSFSK 177
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 178 YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF 218
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 3e-17
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 59/300 (19%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TY+ +LG G + + K T+ A K I +L + + REV ++ +L
Sbjct: 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKNLK- 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV------ 180
H NIV L + L+ E D + Y + + V +
Sbjct: 62 HANIVTLHDIIHTERCLTLVF------EYLDSDLK--QYLDNCGNLMSMHNVKIFMFQLL 113
Query: 181 --VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL----SVFFKPGDVFKDLVGSA 234
+ YCH ++HRDLKP+N L + E LK DFGL SV P + + V +
Sbjct: 114 RGLSYCHKRKILHRDLKPQNLLINEKGE---LKLADFGLARAKSV---PTKTYSNEVVTL 167
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+Y P+VL Y D+W G ILY + +G P F G T + I R + +
Sbjct: 168 WYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEET 227
Query: 293 WPNISSSAK--------------------------DIVKKMLHADPKERLSAAEVLNHPW 326
WP I+S+ + D++ +L + K R+SA L H +
Sbjct: 228 WPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 4e-17
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D +T+ +G+G +G + V +K + A K + I+ E++ E I+
Sbjct: 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID----EEIEAEYNILKA 70
Query: 124 LTGHRNIVELKGAYEDRHSVN-----LIMDLCAGGELFDRIIAKG------HYSERAAAN 172
L+ H N+V+ G Y + N L+++LC GG + D + KG E A
Sbjct: 71 LSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTD--LVKGFLKRGERMEEPIIAY 128
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-V 231
+ + + + + H +HRD+K N L ++ + +K DFG+S + ++ V
Sbjct: 129 ILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTSTRLRRNTSV 185
Query: 232 GSAYYVAPEV------LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
G+ +++APEV L Y A D+WS G+ L G PP + +R
Sbjct: 186 GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL-ADLHP------MRAL 238
Query: 286 IDFSSDPWPNI------SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+P P + S+ D ++K L D ++R + +++L H ++
Sbjct: 239 FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 82.1 bits (202), Expect = 5e-17
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 80
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 139
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 140 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 255
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S E L HP++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315
Query: 329 VDGDASD 335
V D ++
Sbjct: 316 VWYDPAE 322
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 6e-17
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 34/227 (14%)
Query: 74 ELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+LG G FGV T A K + S KL D ++D +E IMH L H N+
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL--SDIMDDFLKEAAIMHSLD-HENL 58
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+ L G H + ++ +L G L DR+ A GH+ + Q+ + Y S
Sbjct: 59 IRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR 117
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV----------- 237
+HRDL N L +S D +K DFGL + +YV
Sbjct: 118 FIHRDLAARNILLAS---DDKVKIGDFGLMRALPQNE--------DHYVMEEHLKVPFAW 166
Query: 238 -APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
APE LR R + +D+W GV L+ + + G P+ G + I I
Sbjct: 167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 1e-16
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 66
Query: 118 VQIMHHLTGHRNIVEL------KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 67 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 123
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 124 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLAR--HTDDEMTGYV 178
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 179 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 299 AHAYFAQYHDPDDEPV 314
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 2e-16
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDN 458
NGTID+ EF+T M + EE + +AF+ FD+D
Sbjct: 61 NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDG 97
|
Length = 149 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 4e-16
Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 34/260 (13%)
Query: 72 GRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
GR +G GQFG Y ++ ++ K A K+ + + E +E IM H
Sbjct: 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKT--CKNCTSPSVREKFLQEAYIMRQFD-HP 67
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL--------CRQMVTV 180
+IV+L G + + V ++M+L GEL Y + +L Q+ T
Sbjct: 68 HIVKLIGVITE-NPVWIVMELAPLGEL-------RSYLQVNKYSLDLASLILYSYQLSTA 119
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVA 238
+ Y S +HRD+ N L SS +K DFGLS + + +K G ++A
Sbjct: 120 LAYLESKRFVHRDIAARNVLVSSP---DCVKLGDFGLSRYLEDESYYKASKGKLPIKWMA 176
Query: 239 PEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-N 295
PE + R + + +D+W GV ++ IL+ GV PF G + I G P P N
Sbjct: 177 PESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG----ERLPMPPN 232
Query: 296 ISSSAKDIVKKMLHADPKER 315
+ ++ K DP +R
Sbjct: 233 CPPTLYSLMTKCWAYDPSKR 252
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 80.1 bits (197), Expect = 4e-16
Identities = 81/310 (26%), Positives = 125/310 (40%), Gaps = 74/310 (23%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y G +G G FGV Y DT ++ A K + D + RE+ IM +L H
Sbjct: 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKV-------LQDPQYKNRELLIMKNLN-H 118
Query: 128 RNIVELKGAY--------EDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAA------ 171
NI+ LK Y E +N++M E + + K HY+ A
Sbjct: 119 INIIFLKDYYYTECFKKNEKNIFLNVVM------EFIPQTVHKYMKHYARNNHALPLFLV 172
Query: 172 -----NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
LCR + Y HS + HRDLKP+N L + LK DFG + G
Sbjct: 173 KLYSYQLCRALA----YIHSKFICHRDLKPQNLLIDPNTHT--LKLCDFGSAKNLLAGQR 226
Query: 227 FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR- 283
+ S +Y APE++ NY D+WS G I+ ++ G P F G QS D ++R
Sbjct: 227 SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG---QSSVDQLVRI 283
Query: 284 --------------GHIDFSSDPWPNISS-------------SAKDIVKKMLHADPKERL 316
+ +++ +P++ A + + + L +P +RL
Sbjct: 284 IQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL 343
Query: 317 SAAEVLNHPW 326
+ E L P+
Sbjct: 344 NPIEALADPF 353
|
Length = 440 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 4e-16
Identities = 75/300 (25%), Positives = 119/300 (39%), Gaps = 56/300 (18%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
+Y+ +LG G + Y + Q A K IS + + V RE ++ L
Sbjct: 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVIS---MKTEEGVPFTAIREASLLKGLK- 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR------QMVTV 180
H NIV L + ++ + E +A+ + Q++
Sbjct: 62 HANIVLLHDIIHTKETLTFVF------EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRG 115
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAP 239
+ Y H ++HRDLKP+N L S E LK DFGL+ P + V + +Y P
Sbjct: 116 LAYIHGQHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF---SSDPWP 294
+VL +Y + DIW AG I +L G P F G + +F+ + + + D WP
Sbjct: 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS--DVFEQLEKIWTVLGVPTEDTWP 230
Query: 295 NISS----------------------------SAKDIVKKMLHADPKERLSAAEVLNHPW 326
+S A+D+ +ML PK+R+SA + L HP+
Sbjct: 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 4e-16
Identities = 81/310 (26%), Positives = 131/310 (42%), Gaps = 66/310 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV V H+ + I +RKLI+ + +R RE++++H
Sbjct: 8 ELGAGNGGVVTKVLHRPSGL------IMARKLIHLEIKPAIRNQIIRELKVLHECNS-PY 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYC---H 185
IV GA+ +++ M+ GG L D+++ K G E + ++ + Y H
Sbjct: 61 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEV 241
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE
Sbjct: 120 K--IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 169
Query: 242 LRRN-YGAEADIWSAGVILYILLSG---VPPFWGETEQSIF----------DAILRGHID 287
L+ Y ++DIWS G+ L + G +PP + +++F ++
Sbjct: 170 LQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229
Query: 288 FSSDPWP--------NI-------------SSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P P I S +D V K L +PKER E+ HP+
Sbjct: 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289
Query: 327 -MRVDGDASD 335
R + + D
Sbjct: 290 IKRAELEEVD 299
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 4e-16
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VG 232
Q++ + Y HS G++HRD+KP N L +S + LK DFGL+ +P D K + V
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEP-DESKHMTQEVV 166
Query: 233 SAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL-------- 282
+ YY APE+L R+Y + DIWS G I LL F ++ D I
Sbjct: 167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226
Query: 283 ----------RGHIDFSSDPWPNISS----------SAKDIVKKMLHADPKERLSAAEVL 322
R HI P++ A ++ +ML DP +R+SAA+ L
Sbjct: 227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADAL 286
Query: 323 NHPWMR 328
HP++
Sbjct: 287 AHPYLD 292
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 77.7 bits (191), Expect = 6e-16
Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 36/289 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ D +T+ +G+G +G Y VT+K A K + D E++ E I+
Sbjct: 17 LGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI----SDVDEEIEAEYNIL 72
Query: 122 HHLTGHRNIVELKGA-YEDRHSVN----LIMDLCAGG---ELFDRIIAKGH-YSERAAAN 172
L H N+V+ G Y+ V L+++LC GG EL ++ G E +
Sbjct: 73 QSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISY 132
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-V 231
+ + + + H+ ++HRD+K N L ++ + +K DFG+S + ++ V
Sbjct: 133 ILYGALLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTSTRLRRNTSV 189
Query: 232 GSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
G+ +++APEV+ +Y A D+WS G+ L G PP + I R
Sbjct: 190 GTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR-- 247
Query: 286 IDFSSDPWPNISSSAK------DIVKKMLHADPKERLSAAEVLNHPWMR 328
+P P + K + + L D + R S +L HP+++
Sbjct: 248 -----NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 77.7 bits (191), Expect = 6e-16
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN---IV 131
+GRG FG Y DT + +A K + +K I E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ A+ + I+DL GG+L + G +SE+ +++ + + H+ V++
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAE 249
RDLKP N L E ++ +D GL+ F VG+ Y+APEVL++ Y +
Sbjct: 121 RDLKPANILLD---EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAYDSS 176
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
AD +S G +L+ LL G PF + + I R + + + + S K +++ +L
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTVNVELPDSFSPELKSLLEGLLQ 235
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
D +RL A EV H + +
Sbjct: 236 RDVSKRLGCLGRGAQEVKEHVFFK 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 1e-15
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +ELG GQFGV +L + + + A K+I+ + D +E E ++M L+ H +
Sbjct: 8 FMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIE----EAKVMMKLS-HPKL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G + + ++ + G L + + + G S+ ++C+ + + Y
Sbjct: 62 VQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLRRN- 245
+HRDL N L SS+ +K +DFG++ + D + G+ + V PEV +
Sbjct: 122 IHRDLAARNCLVSSTG---VVKVSDFGMTRYVL-DDEYTSSSGAKFPVKWSPPEVFNFSK 177
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
Y +++D+WS GV+++ + G PF ++ + + I RG + P ++S +
Sbjct: 178 YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR----PKLAS--MTVY 231
Query: 305 KKML---HADPKERLSAAEVL 322
+ M H P+ R + AE+L
Sbjct: 232 EVMYSCWHEKPEGRPTFAELL 252
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 1e-15
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR----EVQIMHHLTGHR 128
++G+G FG Y K + A K+ S D++R E +I+ H
Sbjct: 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRS------TLPPDLKRKFLQEAEILKQYD-HP 52
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSM 187
NIV+L G + + ++M+L GG L + K + + + + Y S
Sbjct: 53 NIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK 112
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---------- 237
+HRDL N L E++ LK +DFG+S ++ G Y V
Sbjct: 113 NCIHRDLAARNCLVG---ENNVLKISDFGMS---------REEEGGIYTVSDGLKQIPIK 160
Query: 238 --APEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
APE L NYG +E+D+WS G++L+ S G P+ G + Q + I G+
Sbjct: 161 WTAPEAL--NYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY------ 212
Query: 292 PWPNISSSAKDIVKKMLH---ADPKERLSAAEVLN 323
P ++I + ML DP+ R S +E+ N
Sbjct: 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 68/308 (22%), Positives = 115/308 (37%), Gaps = 64/308 (20%)
Query: 70 IFGRELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---EVQIMHHL 124
+G+ + +L HK T A K I+ ++ ED++ E+ L
Sbjct: 1 ELLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKIN----LDSCSKEDLKLLQQEIITSRQL 56
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY----SERAAANLCRQMVTV 180
H NI+ ++ + ++ L A G D + K H+ E A A + + ++
Sbjct: 57 Q-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNA 113
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSA--- 234
+ Y HS G +HR +K + L S K GL K G + +
Sbjct: 114 LDYIHSKGFIHRSVKASHILLSGDG-----KVVLSGLRYSVSMIKHGKRQRVVHDFPKSS 168
Query: 235 ----YYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI- 286
+++PEVL++N Y ++DI+S G+ L +G PF + +RG +
Sbjct: 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVP 228
Query: 287 -----------------DFSSDPWPNISSSAKDIVKKM------------LHADPKERLS 317
SS+ PN S + L DP+ R S
Sbjct: 229 CLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS 288
Query: 318 AAEVLNHP 325
A+++LNH
Sbjct: 289 ASQLLNHS 296
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 3e-15
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 104 KLINRDDVED------VRREVQIMHHLTGHRNIVEL--KGAYEDRHSVNLIMDLCAGGEL 155
KL+ D E+ RRE + L H NIV L G + + + G L
Sbjct: 9 KLLRTDAPEEEHQRARFRRETALCARLY-HPNIVALLDSGEAPPGL-LFAVFEYVPGRTL 66
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
+ + A G L Q++ + H+ G++HRDLKP+N + S + K DF
Sbjct: 67 REVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDF 126
Query: 216 GLSVF---FKPGDVFK-----DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGV 266
G+ + DV +++G+ Y APE LR +D+++ G+I L+G
Sbjct: 127 GIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQ 186
Query: 267 PPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
G + I L +D S PW +++K L+ DP++R ++A L
Sbjct: 187 RVVQGASVAEILYQQL-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 5e-15
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 41/285 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY--LVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQI 120
R++ R LG G FG Y L +D + Q A K++ + + D D E I
Sbjct: 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTL--PESCSEQDESDFLMEALI 62
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA-------NL 173
M H+NIV L G +R ++++L AGG+L + ER ++
Sbjct: 63 MSKFN-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFC 121
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
R + Y +HRD+ N L + K DFG++ +D+ +
Sbjct: 122 ARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRA 172
Query: 234 AYY------------VAPEV-LRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
+YY + PE L + ++ D+WS GV+L+ + S G P+ G T Q + +
Sbjct: 173 SYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ G DP I+ P++R + A +L
Sbjct: 233 FVTGGG---RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 9e-15
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 49/280 (17%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---E 117
++++ G +G+G+FG L ++ Q+ A K + +DD + E
Sbjct: 4 NSKELK----LGATIGKGEFGDVMLGDYR--GQKVAVKCL-------KDDSTAAQAFLAE 50
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+M L H N+V+L G + + ++ + A G L D + ++G RA L +Q+
Sbjct: 51 ASVMTTLR-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG----RAVITLAQQL 105
Query: 178 VTVVHYCHSM------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
+ C M +HRDL N L S ED K +DFGL+ + +
Sbjct: 106 GFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLA-----KEASQGQD 157
Query: 232 GSAYYV---APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286
V APE LR + ++D+WS G++L+ + S G P+ + + + +G+
Sbjct: 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR 217
Query: 287 DFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLN 323
+ + P ++ K M DP +R + ++
Sbjct: 218 MEAPEGCP------PEVYKVMKDCWELDPAKRPTFKQLRE 251
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 1e-14
Identities = 74/291 (25%), Positives = 108/291 (37%), Gaps = 56/291 (19%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-------REVQIMHHLT 125
R +G+G G YL ++ A K I R+D+ + RE +I L
Sbjct: 8 RLIGKGGMGEVYLAYDPVCSRRVALKKI-------REDLSENPLLKKRFLREAKIAADLI 60
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--------RIIAKGHYSERAAANLCRQM 177
H IV + D V M G L ++K + +
Sbjct: 61 -HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIF 119
Query: 178 VTV---VHYCHSMGVMHRDLKPENFLF---------------SSSAEDSPLKATDFGL-- 217
+ + Y HS GV+HRDLKP+N L E+ L D
Sbjct: 120 HKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERN 179
Query: 218 ---SVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEA-DIWSAGVILYILLSGVPPFWGET 273
S PG + VG+ Y+APE L +E+ DI++ GVILY +L+ P+ +
Sbjct: 180 ICYSSMTIPGKI----VGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK 235
Query: 274 EQSIFDAILRGHIDFSSD--PWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ I R I + P+ I I K L DP ER S+ + L
Sbjct: 236 GRKI---SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283
|
Length = 932 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-14
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG Y ++ D + A K + + + E + E++I
Sbjct: 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKI 91
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMV 178
M HL H NIV L GA + +I + C G+L + + K + + Q+
Sbjct: 92 MSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVA 151
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSA 234
+ + S +HRDL N L + +K DFGL+ D+ D + G+A
Sbjct: 152 KGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLA-----RDIMNDSNYVVKGNA 203
Query: 235 Y----YVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWG 271
++APE + Y E+D+WS G++L+ + S G P+ G
Sbjct: 204 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 77 RGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA 136
RG FG YL K+ + +A K + +IN++ V V+ E + L+ IV L +
Sbjct: 14 RGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-LSKSPFIVHLYYS 72
Query: 137 YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKP 196
+ ++V L+M+ GG++ + G++ E A ++ + Y H G++HRDLKP
Sbjct: 73 LQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKP 132
Query: 197 ENFLFSSSAEDSPLKATDFGLS 218
+N L S+ +K TDFGLS
Sbjct: 133 DNMLISNEGH---IKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 2e-14
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 33/290 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHRN 129
LG G G Y H T++ A K +I D ++++ QIM L
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVK------VIPLDITVELQK--QIMSELEILYKCDSPY 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH---YCHS 186
I+ GA+ + +++ + GG L Y + L R V VV Y S
Sbjct: 61 IIGFYGAFFVENRISICTEFMDGGSL-------DVYRKIPEHVLGRIAVAVVKGLTYLWS 113
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRN 245
+ ++HRD+KP N L ++ + +K DFG+S + K VG+ Y+APE +
Sbjct: 114 LKILHRDVKPSNMLVNTRGQ---VKLCDFGVSTQLV-NSIAKTYVGTNAYMAPERISGEQ 169
Query: 246 YGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRGHIDFSSDPWP--NISSSA 300
YG +D+WS G+ L G P + +L+ +D P S
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + + PKER + +++HP++ D + + + + V +++ R
Sbjct: 230 VHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNAEVVSMWVCRALEERR 279
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 3e-14
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
L+EE+I LKE F+ D D+ G I EL L LG SE+E+ +L E D GN T
Sbjct: 13 QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID-AGNET 71
Query: 426 IDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
+D+ EF+T ++ + R ++EE L +AF+ FDKD+
Sbjct: 72 VDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHD 106
|
Length = 160 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 3e-14
Identities = 73/306 (23%), Positives = 135/306 (44%), Gaps = 32/306 (10%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRD----DVEDVRRE 117
E R G+ LG G FG + + K ++ + K++ D D+ D+ E
Sbjct: 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSE 67
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + ++++ + G L + + A+ + + C+
Sbjct: 68 MEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLP 127
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 128 EEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT---EDNVMKIADFGLARDV 184
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
+F + GH D N + I+++ HA P +R + +++ + ++D+
Sbjct: 245 LFKLLKEGH---RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDE 301
Query: 337 PLDIAV 342
LD++V
Sbjct: 302 YLDLSV 307
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 6e-14
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+E++ ++E F DTD SGTI +ELK + LG + E++Q++ D DG+G I
Sbjct: 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKI 70
Query: 427 DYIEFI-TATMHMNRVEREEHLYKAFEYFDKDNS 459
D+ EF+ T + + E + KAF FD D +
Sbjct: 71 DFEEFLDIMTKKLGERDPREEILKAFRLFDDDKT 104
|
Length = 158 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 7e-14
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 30/225 (13%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + I +RKLI+ + +R RE+Q++H
Sbjct: 12 ELGAGNGGVVFKVSHKPSG------LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 64
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 123
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 124 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 175
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRG 284
+Y ++DIWS G+ L + G +PP + + +F + G
Sbjct: 176 GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 1e-13
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 27/175 (15%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ + + HS V+HRDLKP+N L +SS + +K DFGL+ + +V + +
Sbjct: 118 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 174
Query: 236 YVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI-LRGHID-- 287
Y APEV L+ +Y D+WS G I + P F G ++ I D I L G D
Sbjct: 175 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234
Query: 288 ---------FSSDPW-------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
F S +I KD++ K L +P +R+SA L+HP+
Sbjct: 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 1e-13
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 73 RELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
R+LG G FG L + +T +Q A KS+ + + D+++E++I+ +L H
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HE 66
Query: 129 NIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG + + + LIM+ G L + + K + + Q+ + Y
Sbjct: 67 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG 126
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYYVAPEV 241
S +HRDL N L S + +K DFGL+ + V DL ++ APE
Sbjct: 127 SRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183
Query: 242 L-RRNYGAEADIWSAGVILYILLS 264
L + + +D+WS GV LY LL+
Sbjct: 184 LIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 2e-13
Identities = 68/279 (24%), Positives = 104/279 (37%), Gaps = 58/279 (20%)
Query: 75 LGRGQFGVTYLVTHKDT------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
LG G FG Y T D + A K++ RK + ++ +E +M + H
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTL--RKGATDQEKKEFLKEAHLMSNFN-HP 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA--------------NLC 174
NIV+L G +IM+L GG+L Y A ++C
Sbjct: 60 NIVKLLGVCLLNEPQYIIMELMEGGDLL-------SYLRDARVERFGPPLLTLKELLDIC 112
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP--LKATDFGLSVFFKPGDVFKDLVG 232
+ Y M +HRDL N L S D+ +K DFGL+ +D+
Sbjct: 113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA---------RDIYK 163
Query: 233 SAYY------------VAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIF 278
S YY +APE L + ++D+WS GV+++ IL G P+ Q +
Sbjct: 164 SDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL 223
Query: 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
+ G N ++ DP ER +
Sbjct: 224 QHVTAGG---RLQKPENCPDKIYQLMTNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 2e-13
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 73 RELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
R LG G FG L + T + A K++ + + ++E+ I+ L H
Sbjct: 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HE 66
Query: 129 NIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANL------CRQMVTV 180
NIV+ KG ++ + LIM+ G L D Y + NL +Q+
Sbjct: 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------YLPKHKLNLAQLLLFAQQICEG 119
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYY 236
+ Y HS +HRDL N L + D +K DFGL+ G V +D ++
Sbjct: 120 MAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 176
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLS 264
A E L+ N + +D+WS GV LY LL+
Sbjct: 177 YAVECLKENKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 2e-13
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +ELG GQFGV + + A K I + + +E E ++M L+ H +
Sbjct: 8 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIE----EAKVMMKLS-HEKL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA-ANLCRQMVTVVHYCHSMGV 189
V+L G + + ++ + + G L + + G + + +C+ + + Y S
Sbjct: 62 VQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLRR-N 245
+HRDL N L +K +DFGLS + D + VGS + V PEVL
Sbjct: 122 IHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLLYSK 177
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ +++D+W+ GV+++ + S G P+ + + +G
Sbjct: 178 FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL 218
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 2e-13
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTY-----LVTHKDTKQQFACKSISSRKLINRDDVEDVR 115
P+ VR F ELG G FG Y + + A K++ ++ ++ R
Sbjct: 3 PLSAVR----FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTL--KENAEPKVQQEFR 56
Query: 116 REVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA---- 171
+E ++M L H NIV L G ++ + A G+L + ++ +S+ A
Sbjct: 57 QEAELMSDLQ-HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDE 115
Query: 172 ------------NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
++ Q+ + Y S +HRDL N L E +K +DFGLS
Sbjct: 116 TVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---GEGLTVKISDFGLSR 172
Query: 220 FFKPGDVFKDLVGSAY---YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
D ++ S ++ PE +L + E+DIWS GV+L+ + S G+ P++G +
Sbjct: 173 DIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232
Query: 275 QSIFDAILRGHI 286
Q + + I +
Sbjct: 233 QEVIEMIRSRQL 244
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (172), Expect = 2e-13
Identities = 66/249 (26%), Positives = 99/249 (39%), Gaps = 46/249 (18%)
Query: 116 REVQIMHHLTGHRNIVELKGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAA 170
RE ++ L H NIV L + ++ L+ DLC + D+ G
Sbjct: 52 REASLLKGLK-HANIVLLHDIIHTKETLTLVFEYVHTDLC---QYMDK--HPGGLHPENV 105
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD 229
Q++ + Y H ++HRDLKP+N L S + E LK DFGL+ P + +
Sbjct: 106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSN 162
Query: 230 LVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHI 286
V + +Y P+VL Y D+W G I ++ GV F G + Q + I
Sbjct: 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLG 222
Query: 287 DFSSDPWPNISS----------------------------SAKDIVKKMLHADPKERLSA 318
+ D WP + S A+D+ K+L PK RLSA
Sbjct: 223 TPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA 282
Query: 319 AEVLNHPWM 327
L+H +
Sbjct: 283 QAALSHEYF 291
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 2e-13
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
ELGRG +GV + H T A K I R +N + + + ++ I V
Sbjct: 7 EELGRGAYGVVDKMRHVPTGTIMAVKRI--RATVNSQEQKRLLMDLDISMRSVDCPYTVT 64
Query: 133 LKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHS-MG 188
GA V + M++ + + ++ KG E + +V + Y HS +
Sbjct: 65 FYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS 124
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPEVL- 242
V+HRD+KP N L + + + +K DFG+S G + + G Y+APE +
Sbjct: 125 VIHRDVKPSNVLINRNGQ---VKLCDFGIS-----GYLVDSVAKTIDAGCKPYMAPERIN 176
Query: 243 ----RRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNI 296
++ Y ++D+WS G+ + L +G P+ W Q L+ ++ S P
Sbjct: 177 PELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ-----LKQVVEEPSPQLPAE 231
Query: 297 SSSA--KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S +D V K L + KER + E+L HP+ + K D+A
Sbjct: 232 KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL---HLSKNTDVA 275
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 5e-13
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 38/282 (13%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRD----DVEDV 114
E R+ + G+ LG G FG + K+ + ++ K++ D D+ D+
Sbjct: 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAV---KMLKSDATEKDLSDL 70
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK------------ 162
E+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 71 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130
Query: 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLA 187
Query: 219 VFFKPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGET 273
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G
Sbjct: 188 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247
Query: 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+ +F + GH D N ++ +++ HA P +R
Sbjct: 248 VEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 286
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 5e-13
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 20/257 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + R+LG GQFG + +T A K++ + D +D E QIM L
Sbjct: 5 RTSIQLLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGTM----DPKDFLAEAQIMKKLR 59
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H +++L + ++ +L G L + + A ++ Q+ + + Y
Sbjct: 60 -HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAY 118
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE 240
+ +HRDL N L E++ K DFGL+ K D+++ G+ + + APE
Sbjct: 119 LEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKE-DIYEAREGAKFPIKWTAPE 174
Query: 241 VLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
N + ++D+WS G++L I+ G P+ G T + + +G + P
Sbjct: 175 AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG---YRMPCPPGCPK 231
Query: 299 SAKDIVKKMLHADPKER 315
DI+ DP +R
Sbjct: 232 ELYDIMLDCWKEDPDDR 248
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 8e-13
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 48/234 (20%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
LG+G FG + T KD K+ + K D ++++ E +I+ H NI
Sbjct: 3 LGKGNFGEVFKGTLKD-------KTPVAVKTCKEDLPQELKIKFLSEARILKQYD-HPNI 54
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG---------HYSERAAANLCRQMVTVV 181
V+L G R + ++M+L GG+ + K ++ AAA +
Sbjct: 55 VKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMA------- 107
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS------VFFKPGDVFKDLVGSAY 235
Y S +HRDL N L E++ LK +DFG+S ++ G K +
Sbjct: 108 -YLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSG--LKQI--PIK 159
Query: 236 YVAPEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ APE L NYG +E+D+WS G++L+ S GV P+ G T Q + + +G+
Sbjct: 160 WTAPEAL--NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY 211
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 9e-13
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 230 LVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288
++G+ Y+APE+L + +G D W+ GV L+ L+G+PPF ET Q +F IL I
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI-- 597
Query: 289 SSDPWPN----ISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PWP +S +A++ ++ +L DP +R E+ HP
Sbjct: 598 ---PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 68.6 bits (167), Expect = 1e-12
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 72 GRELGRGQFGVTYLVTHKDTK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G ++GRG +G Y KD K +++A K I + RE+ ++ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELK-HPN 59
Query: 130 IVELKG---AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----------AANLCR 175
++ L+ ++ DR V L+ D A +L+ I K H + +A +L
Sbjct: 60 VIALQKVFLSHSDR-KVWLLFDY-AEHDLWH--IIKFHRASKANKKPMQLPRSMVKSLLY 115
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFL-FSSSAEDSPLKATDFGLSVFF----KPGDVFKDL 230
Q++ +HY H+ V+HRDLKP N L E +K D G + F KP +
Sbjct: 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 175
Query: 231 VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF 269
V + +Y APE+L R+Y DIW+ G I LL+ P F
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 1e-12
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + R+LG G FG + K+ + A K + S L+ + D + +EVQ + L
Sbjct: 5 REEFTLERKLGSGYFGEVWEGLWKNRVR-VAIKILKSDDLLKQQDFQ---KEVQALKRLR 60
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA--NLCRQMVTVVHY 183
H++++ L V +I +L G L + + A+ ++ Q+ + Y
Sbjct: 61 -HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAY 119
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY-------Y 236
+HRDL N L ED K DFGL+ + K+ V + +
Sbjct: 120 LEEQNSIHRDLAARNILV---GEDLVCKVADFGLA------RLIKEDVYLSSDKKIPYKW 170
Query: 237 VAPEVL-RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + ++D+WS G++LY + + G P+ G ++D I G+
Sbjct: 171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY 221
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 72 GRELGRGQFGVTYLVTHKDTK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G ++GRG +G Y KD K + +A K I + RE+ ++ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELK-HPN 59
Query: 130 IVELKG---AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----------AANLCR 175
++ L+ ++ DR V L+ D A +L+ I K H + +A +L
Sbjct: 60 VISLQKVFLSHADR-KVWLLFDY-AEHDLWH--IIKFHRASKANKKPVQLPRGMVKSLLY 115
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFL-FSSSAEDSPLKATDFGLSVFF----KPGDVFKDL 230
Q++ +HY H+ V+HRDLKP N L E +K D G + F KP +
Sbjct: 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 175
Query: 231 VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF 269
V + +Y APE+L R+Y DIW+ G I LL+ P F
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 2e-12
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 31/253 (12%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G+FG L ++ K C + N + E +M L H N+V+L
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQLL 65
Query: 135 GA-YEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
G E++ + ++ + A G L D R + G + + ++C M Y +
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM----EYLEAN 121
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG-SAYYVAPEVLR-RN 245
+HRDL N L S ED+ K +DFGL+ K +D + APE LR +
Sbjct: 122 NFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKK 175
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ ++D+WS G++L+ + S G P+ + + + +G+ + D P + D++
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPV---VYDVM 232
Query: 305 KKMLHADPKERLS 317
K+ H D R S
Sbjct: 233 KQCWHLDAATRPS 245
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 2e-12
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 22/222 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+GRG FG + + A KS R+ + D +E +I+ + H NIV L
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKS--CRETLPPDLKAKFLQEARILKQYS-HPNIVRL 58
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G + + ++M+L GG+ + +G + + + Y S +HR
Sbjct: 59 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHR 118
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLS------VFFKPGDVFKDLVGSAYYVAPEVLRRNY 246
DL N L + E + LK +DFG+S V+ G + + V + APE L NY
Sbjct: 119 DLAARNCLVT---EKNVLKISDFGMSREEEDGVYASTGGMKQIPVK---WTAPEAL--NY 170
Query: 247 G---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
G +E+D+WS G++L+ S G P+ + Q +AI +G
Sbjct: 171 GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 3e-12
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 44/203 (21%)
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A + +Q++ + Y H+ ++HRD+K EN + D D G + F F
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIG-DLGAAQFPVVAPAF 213
Query: 228 KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286
L G+ APEVL R+ Y ++ADIWSAG++L+ +L+ + + + + + H
Sbjct: 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS 273
Query: 287 --------------DFSSDP---------------------WP-----NISSSAKDIVKK 306
+F DP +P N+ + +V K
Sbjct: 274 HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHK 333
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
ML D R SA E+LN+P
Sbjct: 334 MLTFDAAMRPSAEEILNYPMFAQ 356
|
Length = 357 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 3e-12
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRD----DVEDVRREVQI 120
R+ G+ LG G FG + + ++++ + K++ D D+ D+ E+++
Sbjct: 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 73
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----- 175
M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 74 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133
Query: 176 -----------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDVNNI 190
Query: 225 DVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFD 279
D +K ++APE L R Y ++D+WS GV+++ I G P+ G + +F
Sbjct: 191 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 250
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+ GH D N ++ +++ HA P R
Sbjct: 251 LLKEGH---RMDKPANCTNELYMMMRDCWHAIPSHR 283
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 62/269 (23%), Positives = 100/269 (37%), Gaps = 41/269 (15%)
Query: 73 RELGRGQFGVT---YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
+ELG G FG + + + A K++ + ++ RE +M L H
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA--GKKEFLREASVMAQLD-HPC 57
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
IV L G + + L+M+L G L + + L Q+ + Y S
Sbjct: 58 IVRLIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYY------------ 236
+HRDL N L + K +DFG+S + L GS YY
Sbjct: 117 VHRDLAARNVLLVN---RHQAKISDFGMS---------RALGAGSDYYRATTAGRWPLKW 164
Query: 237 VAPEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292
APE + NYG +++D+WS GV L+ S G P+ + + G
Sbjct: 165 YAPECI--NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE---RLPR 219
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEV 321
I+ P++R + +E+
Sbjct: 220 PEECPQEIYSIMLSCWKYRPEDRPTFSEL 248
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-12
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGH 127
F ++LG+G FG L + D Q + ++ +KL + + D RE++I+ L H
Sbjct: 7 KFIQQLGKGNFGSVELCRY-DPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ-H 64
Query: 128 RNIVELKG-AYE-DRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----AANLCRQMVTV 180
NIV+ KG Y R ++ L+M+ G L D + + A+ +C+ M
Sbjct: 65 DNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGM--- 121
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS----------VFFKPGDVFKDL 230
Y S +HRDL N L S ++ +K DFGL+ +PG+
Sbjct: 122 -EYLGSKRYVHRDLATRNILVES---ENRVKIGDFGLTKVLPQDKEYYKVREPGE----- 172
Query: 231 VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
++ APE L + + +D+WS GV+LY L +
Sbjct: 173 -SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 3e-12
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV V HK + I +RKLI+ + +R RE+Q++H
Sbjct: 12 ELGAGNGGVVTKVQHKPSGL------IMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 64
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-G 188
IV GA+ +++ M+ GG L + E + ++ + Y
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 124
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR- 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQG 176
Query: 244 RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIF 278
+Y ++DIWS G+ L L G +PP + ++IF
Sbjct: 177 THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF 214
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 4e-12
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 33/303 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD-DVEDVRREVQI 120
R+ + G+ LG G FG K Q ++ K D D+ D+ E+++
Sbjct: 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMEL 70
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----------------GH 164
M + H+NI+ L G + +I++ A G L + + A+
Sbjct: 71 MKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S + + Q+ + Y S +HRDL N L ED+ +K DFGL+
Sbjct: 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV---TEDNVMKIADFGLARGVHDI 187
Query: 225 DVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFD 279
D +K ++APE L R Y ++D+WS G++++ I G P+ G + +F
Sbjct: 188 DYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK 247
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
+ GH D N + ++++ HA P +R + + L +V S++ LD
Sbjct: 248 LLREGH---RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ-LVEALDKVLAAVSEEYLD 303
Query: 340 IAV 342
+++
Sbjct: 304 LSM 306
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 5e-12
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 48/252 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+T + RELG G FG +L ++ K+ A K++ ++ + D +D RE ++
Sbjct: 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTL--KETASNDARKDFEREAEL 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN-------- 172
+ + H NIV+ G + ++ + G+L + + G + +
Sbjct: 62 LTNF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELT 120
Query: 173 ------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
+ Q+ + + Y S +HRDL N L D +K DFG+S
Sbjct: 121 LSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYDLVVKIGDFGMS-------- 169
Query: 227 FKDLVGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGE 272
+D+ + YY + PE ++ R + E+D+WS GV+L+ I G P++G
Sbjct: 170 -RDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228
Query: 273 TEQSIFDAILRG 284
+ + + + I +G
Sbjct: 229 SNEEVIECITQG 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 6e-12
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K G ++
Sbjct: 51 DFLSEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQL 108
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 109 VGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL---VCKVSDFGLS------RVLEDD 159
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + APE + R + + +D+WS G++++ ++S G P+W + Q +
Sbjct: 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI 219
Query: 279 DAILRGH 285
AI G+
Sbjct: 220 KAIEEGY 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 53/293 (18%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
E R RELG+G FG+ Y V + + + A K+++ + + + E
Sbjct: 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNE 59
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL---- 173
+M H ++V L G ++M+L A G+L + + E
Sbjct: 60 ASVMKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPP 116
Query: 174 --------CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225
++ + Y + +HRDL N + + ED +K DFG++
Sbjct: 117 TLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTVKIGDFGMT------- 166
Query: 226 VFKDLVGSAYY------------VAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWG 271
+D+ + YY +APE L+ + ++D+WS GV+L+ + P+ G
Sbjct: 167 --RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG 224
Query: 272 ETEQSIFDAIL-RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ + + ++ GH+D + P+ ++++ +PK R + E+++
Sbjct: 225 LSNEEVLKFVIDGGHLDLPENC-PDK---LLELMRMCWQYNPKMRPTFLEIVS 273
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 3e-11
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 54/291 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + RELG G FG +L ++ K A K++ L R +D +RE ++
Sbjct: 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR---KDFQREAEL 60
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF--------DRII--------AKGH 164
+ +L H +IV+ G D + ++ + G+L D +I AKG
Sbjct: 61 LTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 119
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
++ Q+ + + Y S +HRDL N L ++ +K DFG+S
Sbjct: 120 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL---VKIGDFGMS------ 170
Query: 225 DVFKDLVGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFW 270
+D+ + YY + PE ++ R + E+D+WS GVIL+ I G P++
Sbjct: 171 ---RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
+ + + I +G + P DI+ +P++RL+ E+
Sbjct: 228 QLSNTEVIECITQGRVLERPRVCPK---EVYDIMLGCWQREPQQRLNIKEI 275
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 9e-11
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 34/251 (13%)
Query: 85 LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144
LV T+Q F K + +R+ + + V M L H+ IV ED SV
Sbjct: 11 LVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCL--HKYIVS-----ED--SVF 61
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
L++ GG+L+ I + E +MV + H G++ RDL P N L
Sbjct: 62 LVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR 121
Query: 205 AEDSPLKATDFGLSVFFKP---GDVFKDLVGSAYYVAPEVLRRNYGAEA-DIWSAGVILY 260
++ T F + G+ +++ Y APEV + EA D WS G IL+
Sbjct: 122 GH---IQLTYFSRWSEVEDSCDGEAVENM-----YCAPEVGGISEETEACDWWSLGAILF 173
Query: 261 ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA- 319
LL+ G+T + + H + W +S A+ +++++L +P ERL A
Sbjct: 174 ELLT------GKTLVECHPSGINTHTTLNIPEW--VSEEARSLLQQLLQFNPTERLGAGV 225
Query: 320 ----EVLNHPW 326
++ +HP+
Sbjct: 226 AGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 1e-10
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ SEEEI KE FK D D +G I+ EL+ + LG +L++ EV +++ ADVDG+G
Sbjct: 79 DTDSEEEI---KEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 425 TIDYIEFI 432
I+Y EF+
Sbjct: 136 QINYEEFV 143
|
Length = 149 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 30/273 (10%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +G G FG K + ++ ++DD D E++++ L H NI
Sbjct: 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 70
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFD-----RIIAKG---HYSERAAANLCRQMVTV-- 180
+ L GA E R + L ++ G L D R++ + A+ L Q +
Sbjct: 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130
Query: 181 ------VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGS 233
+ Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 131 ADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGR 184
Query: 234 --AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G +
Sbjct: 185 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR 241
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ N D++++ P ER S A++L
Sbjct: 242 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-10
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 36/276 (13%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+GRG FG + HK + A K I S ++ + + + ++ ++ + IV+
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRS--TVDEKEQKRLLMDLDVVMRSSDCPYIVKF 68
Query: 134 KGAYEDRHSVNLIMDLCAGG-ELFDRII---AKGHYSERAAANLCRQMVTVVHYC-HSMG 188
GA + M+L + F + + K E + V ++Y +
Sbjct: 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-----VFFKPGDVFKDLVGSAYYVAPEVL- 242
++HRD+KP N L + +K DFG+S K D G Y+APE +
Sbjct: 129 IIHRDVKPSNILLDRNGN---IKLCDFGISGQLVDSIAKTRDA-----GCRPYMAPERID 180
Query: 243 ---RRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHID-----FSSDP 292
R Y +D+WS G+ LY + +G P+ W S+FD L + S+
Sbjct: 181 PSARDGYDVRSDVWSLGITLYEVATGKFPYPKW----NSVFDQ-LTQVVKGDPPILSNSE 235
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
S S + + L D +R E+L HP+++
Sbjct: 236 EREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 2e-10
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
EEE L+E FK D D+ G I+ EL+ L LG RLS+ EV +L++ D DG+G ID
Sbjct: 90 KEEE---LREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEID 146
Query: 428 YIEFITATMH 437
Y EF
Sbjct: 147 YEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 2e-10
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG + K ++ +I + K +D E IM + H NI+ L
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS-HHNIIRL 71
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G +I + G L D+ + G +S + R + + Y M +H
Sbjct: 72 EGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVH 130
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY----------YVAPEV 241
RDL N L +S+ E K +DFGLS V +D Y + APE
Sbjct: 131 RDLAARNILVNSNLE---CKVSDFGLS------RVLEDDPEGTYTTSGGKIPIRWTAPEA 181
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
+ R + + +D+WS G++++ ++S G P+W + + AI G
Sbjct: 182 IAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 48/283 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LG G FG +++ + L D+ D+ E+++M
Sbjct: 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMK 70
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR------- 175
+ H+NI+ L G + ++++ A G L D + A+ E A+ + R
Sbjct: 71 MIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT 130
Query: 176 ---------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
Q+ + + S +HRDL N L + ED +K DFGL+
Sbjct: 131 QKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---EDHVMKIADFGLA-------- 179
Query: 227 FKDLVGSAYY------------VAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGE 272
+D+ YY +APE L R Y ++D+WS GV+L+ I G P+ G
Sbjct: 180 -RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238
Query: 273 TEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+ +F + G+ + N + +++ H P +R
Sbjct: 239 PVEELFKLLKEGY---RMEKPQNCTQELYHLMRDCWHEVPSQR 278
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 63 EDVRNTYIFGRELGRGQFG--VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
ED++ F +G G FG + ++ K A K + ++ + +D D E+++
Sbjct: 2 EDIK----FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKML--KEFASENDHRDFAGELEV 55
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD-----RII------AKGH----- 164
+ L H NI+ L GA E+R + + ++ G L D R++ AK H
Sbjct: 56 LCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAST 115
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
+ + + T + Y +HRDL N L E+ K DFGLS +
Sbjct: 116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENLASKIADFGLS---RGE 169
Query: 225 DVF-KDLVGS--AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
+V+ K +G ++A E L + Y ++D+WS GV+L+ ++S G P+ G T +++
Sbjct: 170 EVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE 229
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
+ +G + + N +++++ P ER A++
Sbjct: 230 KLPQG---YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQI 268
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 60.9 bits (147), Expect = 3e-10
Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 42/250 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
R+ + RELG G FG +L + +Q ++ + K + + +D RE +++ +
Sbjct: 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 63
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDR-------IIAKGH----YSERAA 170
L H +IV+ G + + ++ + G+L F R ++A+G+ ++
Sbjct: 64 LQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
++ +Q+ + Y S +HRDL N L E+ +K DFG+S +D+
Sbjct: 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMS---------RDV 170
Query: 231 VGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
+ YY + PE ++ R + E+D+WS GV+L+ I G P++ +
Sbjct: 171 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230
Query: 277 IFDAILRGHI 286
+ + I +G +
Sbjct: 231 VIECITQGRV 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 4e-10
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 35/258 (13%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHHLTGHR 128
G +G G+FG + T Q+ A K+I DV + E +M L H+
Sbjct: 10 LGEIIGEGEFGAVLQGEY--TGQKVAVKNIKC-------DVTAQAFLEETAVMTKLH-HK 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM- 187
N+V L G + + ++M+L + G L + + +G RA ++ + + + M
Sbjct: 60 NLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAEGME 114
Query: 188 -----GVMHRDLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEV 241
++HRDL N L S ED K +DFGL V D K V + APE
Sbjct: 115 YLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMGVDNSKLPVK---WTAPEA 168
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L+ + +++D+WS GV+L+ + S G P+ + + + + + +G + +P +
Sbjct: 169 LKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG---YRMEPPEGCPAD 225
Query: 300 AKDIVKKMLHADPKERLS 317
++ +PK+R S
Sbjct: 226 VYVLMTSCWETEPKKRPS 243
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 4e-10
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 26/260 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + R+LG GQFG ++ T T + A K++ + E +E QIM L
Sbjct: 5 RESLKLERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGTM----SPEAFLQEAQIMKKLR 59
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHY-SERAAANLCRQMVTVVHY 183
H +V+L + + ++ + + G L D + +G ++ Q+ + Y
Sbjct: 60 -HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAY 118
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE 240
S +HRDL N L E+ K DFGL+ + D + G+ + + APE
Sbjct: 119 LESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAPE 174
Query: 241 VLRRNYGA---EADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-N 295
NYG ++D+WS G++L I+ G P+ G T + + + + RG+ P P N
Sbjct: 175 AA--NYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY----RMPRPPN 228
Query: 296 ISSSAKDIVKKMLHADPKER 315
D++ + DP+ER
Sbjct: 229 CPEELYDLMLQCWDKDPEER 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 5e-10
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%)
Query: 69 YIFGRELGRGQFGV---TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ GR LG+G+FG L + + Q+ A K + + + + D+E+ RE M
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKA-DIFSSSDIEEFLREAACMKEFD 59
Query: 126 GHRNIVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSER---AAANLCRQ 176
H N+++L G + +I+ G+L ++ E L R
Sbjct: 60 -HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRF 118
Query: 177 MVTV---VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
M+ + + Y S +HRDL N + E+ + DFGLS GD ++ S
Sbjct: 119 MIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQGCAS 175
Query: 234 AY---YVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDF 288
++A E L N Y +D+W+ GV ++ I+ G P+ G I++ +++G +
Sbjct: 176 KLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG--NR 233
Query: 289 SSDPWPNISSSAKDIVKKMLHADPKERLS 317
P P+ +++ + +PK R S
Sbjct: 234 LKQP-PDCLEDVYELMCQCWSPEPKCRPS 261
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 7e-10
Identities = 68/282 (24%), Positives = 110/282 (39%), Gaps = 46/282 (16%)
Query: 17 TTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATS--------SSVGRVLGKPMED---- 64
D + K D S T AT S V +P E
Sbjct: 27 GGTDTSDSKDTTGD--KFDDCDELGDSDDVTHATDYDADEESLSPQTDVCQEPCETTSSS 84
Query: 65 -----VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFAC--KSISSRKLINRDDVEDVRRE 117
VR Y L G G ++ T +Q+ K+++ K RE
Sbjct: 85 DPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGRE 136
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL--CAGGELFDRIIAKGHYSERAAANLCR 175
+ I+ ++ HR I+ L AY + +V ++M C +LF + G A + R
Sbjct: 137 IDILKTIS-HRAIINLIHAYRWKSTVCMVMPKYKC---DLFTYVDRSGPLPLEQAITIQR 192
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-----FFKPGDVFKDL 230
+++ + Y H G++HRD+K EN +F E++ L DFG + P
Sbjct: 193 RLLEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG--DFGAACKLDAHPDTPQCY--GW 247
Query: 231 VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG 271
G+ +PE+L + Y A+ DIWSAG++L+ + +G
Sbjct: 248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289
|
Length = 392 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 9e-10
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTY----LVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
P+ VR F ELG FG Y + D Q A K++ + + N + ++
Sbjct: 3 PLSAVR----FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTL--KDINNPQQWGEFQQ 56
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN---- 172
E +M L H NIV L G V ++ + G+L + +I + +S+ ++
Sbjct: 57 EASLMAELH-HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDG 115
Query: 173 -------------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ Q+ + Y S +H+DL N L E +K +D GLS
Sbjct: 116 TVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GEQLHVKISDLGLSR 172
Query: 220 FFKPGDVFKDLVGSAY---YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
D ++ S ++ PE ++ + +++DIWS GV+L+ + S G+ P++G +
Sbjct: 173 EIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232
Query: 275 QSIFDAI 281
Q + + +
Sbjct: 233 QEVIEMV 239
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-09
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 16/218 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG K ++ +I + K D E IM H NI+ L
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNIIHL 70
Query: 134 KGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G V +I + G L F R G ++ + R + + Y M +H
Sbjct: 71 EGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVH 129
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS------AYYVAPEVLR-R 244
RDL N L +S+ K +DFGLS F + S + APE + R
Sbjct: 130 RDLAARNILVNSNL---VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR 186
Query: 245 NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
+ + +D+WS G++++ ++S G P+W + Q + +AI
Sbjct: 187 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 1e-09
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 380 KSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQ----LMEAADVDGNGTIDYIEFITA 434
K +D D G I EEL+ L LG +L++ EV + D DG+G I + EF+ A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 50/279 (17%)
Query: 75 LGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
LGRG+FG +L K + K++ K + + + RRE+ + L+ H+N
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKN 69
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVH-YCHS 186
+V L G + +I++ G+L F R + +Q V +
Sbjct: 70 VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG 129
Query: 187 MG------VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY---- 236
M +HRDL N L SS E +K + LS KD+ S YY
Sbjct: 130 MDHLSNARFVHRDLAARNCLVSSQRE---VKVSLLSLS---------KDVYNSEYYKLRN 177
Query: 237 -------VAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHID 287
+APE ++ + + ++D+WS GV+++ + G PF+G +++ + + + G ++
Sbjct: 178 ALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE 237
Query: 288 FSSDPWPNISSSAKDIVKKMLH---ADPKERLSAAEVLN 323
P + K M +PK+R S +E+++
Sbjct: 238 -----LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 26/253 (10%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++LG GQFG ++ + ++ + A K++ + V+ E +M L H +V
Sbjct: 12 KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVM 190
L + +I + A G L D + + G + Q+ + Y +
Sbjct: 66 LYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRNYG 247
HRDL+ N L S S K DFGL+ + + + G+ + + APE + N+G
Sbjct: 126 HRDLRAANVLVSESLM---CKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAI--NFG 179
Query: 248 A---EADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKD 302
+ ++D+WS G++LY I+ G P+ G + + A+ RG+ P N D
Sbjct: 180 SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY----RMPRMENCPDELYD 235
Query: 303 IVKKMLHADPKER 315
I+K +ER
Sbjct: 236 IMKTCWKEKAEER 248
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 3e-09
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 47/291 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVE-DVRREVQIMH 122
RN + R++G+G FG + + F ++ K D++ D +RE +M
Sbjct: 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 63
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTV 180
H NIV+L G + L+ + A G+L F R H S RA +L +
Sbjct: 64 EFD-HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR-----HRSPRAQCSLSHSTSSA 117
Query: 181 VHY-------------CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDF 215
C + V +HRDL N L E+ +K DF
Sbjct: 118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADF 174
Query: 216 GLSVFFKPGDVFK----DLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLS-GVPPFW 270
GLS D +K D + + + Y E+D+W+ GV+L+ + S G+ P++
Sbjct: 175 GLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
G + + + G++ D N ++++ P +R S A +
Sbjct: 235 GMAHEEVIYYVRDGNVLSCPD---NCPLELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 62/287 (21%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLV--THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
R + ELG G FG +L + +Q ++ + K + +D +RE +++
Sbjct: 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTV 63
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDR-------------IIAKGHYSER 168
L H++IV G + + ++ + G+L F R +A G +
Sbjct: 64 LQ-HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
+ Q+ + + Y S+ +HRDL N L + +K DFG+S +
Sbjct: 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQGLVVKIGDFGMS---------R 170
Query: 229 DLVGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGETE 274
D+ + YY + PE +L R + E+DIWS GV+L+ I G P++ +
Sbjct: 171 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230
Query: 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
+ I +G P I++ +P++R+ ++
Sbjct: 231 TEAIECITQGRELERPRTCPP---EVYAIMQGCWQREPQQRMVIKDI 274
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 4e-09
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 34/270 (12%)
Query: 75 LGRGQFG--VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+G G FG + + + A K + ++ ++DD D E++++ L H NI+
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHPNIIN 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD-----RII------AKGH-----YSERAAANLCRQ 176
L GA E R + L ++ G L D R++ A + S + +
Sbjct: 61 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGS-- 233
+ + Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 121 VARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGRLP 174
Query: 234 AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G + +
Sbjct: 175 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLE 231
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEV 321
N D++++ P ER S A++
Sbjct: 232 KPLNCDDEVYDLMRQCWREKPYERPSFAQI 261
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 4e-09
Identities = 23/47 (48%), Positives = 25/47 (53%)
Query: 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
G IT EELK L LG LSE EV L D DG+G I + EF
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCV 48
|
Length = 53 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 4e-09
Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 27/252 (10%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 13 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER----AAANLCRQMVTVVHYCHSMGV 189
+ + ++ + + G L D + KG + ++ Q+ + + Y M
Sbjct: 67 YAVVSEE-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRN 245
+HRDL+ N L E+ K DFGL+ + + + G+ + + APE L
Sbjct: 124 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGR 179
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDI 303
+ ++D+WS G++L L + G P+ G + + D + RG+ P P S D+
Sbjct: 180 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDL 235
Query: 304 VKKMLHADPKER 315
+ + +P+ER
Sbjct: 236 MCQCWRKEPEER 247
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 6e-09
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
ELG G FG +K K+Q A K + + + +++ RE +IMH L + IV
Sbjct: 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIV 58
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVM 190
+ G E ++ L+M++ +GG L + K + L Q+ + Y +
Sbjct: 59 RMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFV 117
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAY---YVAPE-VLRRN 245
HRDL N L K +DFGLS D +K + + APE + R
Sbjct: 118 HRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK 174
Query: 246 YGAEADIWSAGVILYILLS-GVPPF 269
+ + +D+WS G+ ++ S G P+
Sbjct: 175 FSSRSDVWSYGITMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 9e-09
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ K + E EEI+ + F+ D D +G I+ + LK +LG +++ E++++++
Sbjct: 78 IMTKKLGERDPREEIL---KAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDE 134
Query: 418 ADVDGNGTIDYIEFIT 433
AD +G+G I EF
Sbjct: 135 ADRNGDGEISEEEFYR 150
|
Length = 158 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
+ +G G+FG K ++ +I + K + D D E IM H NI+
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD-HPNII 68
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGV 189
L+G V +I + G L D+ + + G ++ + R + + + Y M
Sbjct: 69 RLEGVVTKSRPVMIITEYMENGSL-DKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG---SAYYVAPEVLR-RN 245
+HRDL N L +S + K +DFGLS + + G + APE + R
Sbjct: 128 VHRDLAARNILVNS---NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRK 184
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ + +D+WS G++++ ++S G P+W + Q + A+ G+
Sbjct: 185 FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY 225
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 30/240 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV---EDVRREVQIMHH 123
+T F ELG +FG Y T ++++ + L ++ + E+ + E +
Sbjct: 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR 64
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN----------- 172
L H NIV L G +++I C+ +L + ++ + +S+ + +
Sbjct: 65 LQ-HPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEP 123
Query: 173 -----LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
+ Q+ + + S V+H+DL N L +K +D GL D +
Sbjct: 124 ADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN---VKISDLGLFREVYAADYY 180
Query: 228 KDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
K L+G++ +++PE ++ + ++DIWS GV+L+ + S G+ P+ G + Q + + I
Sbjct: 181 K-LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 31/282 (10%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
E R RELG+G FG+ Y V + + + A K+++ + R+ +E + E
Sbjct: 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM-RERIEFL-NE 59
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL---FDRIIAKGHYSERAAANLC 174
+M H ++V L G +IM+L G+L + + + A
Sbjct: 60 ASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSL 118
Query: 175 RQMVTV-------VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
++M+ + + Y ++ +HRDL N + AED +K DFG++ D +
Sbjct: 119 KKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYY 175
Query: 228 ----KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAI 281
K L+ +++PE L+ + +D+WS GV+L+ I P+ G + + + +
Sbjct: 176 RKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ G + D P++ ++++ +PK R S E+++
Sbjct: 235 MEGGLLDKPDNCPDM---LFELMRMCWQYNPKMRPSFLEIIS 273
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 72 GRELGRGQFGVTY---LVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+ LG G FG + + D+ K A K+I R R +++ + M L H
Sbjct: 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLD-H 68
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHS 186
IV L G S+ L+ L G L D + + + N C Q+ ++Y
Sbjct: 69 AYIVRLLGICPGA-SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE 127
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPE-VL 242
++HR+L N L S DS ++ DFG++ P D + + ++A E +L
Sbjct: 128 HRMVHRNLAARNILLKS---DSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL 184
Query: 243 RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
Y ++D+WS GV ++ ++S G P+ G + D + +G
Sbjct: 185 FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 5e-08
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 63/296 (21%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMHHLTG 126
+ G+ LG G+FG T K + +++ + L + ++ D+ E ++ +
Sbjct: 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN- 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAK-----------------GHYSE 167
H ++++L GA + LI++ G L F R K + E
Sbjct: 62 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDE 121
Query: 168 RA---------AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
RA A + R M Y M ++HRDL N L AE +K +DFGLS
Sbjct: 122 RALTMGDLISFAWQISRGM----QYLAEMKLVHRDLAARNVLV---AEGRKMKISDFGLS 174
Query: 219 VFFKPGDVFKDLVGSAY-----------YVAPEVLRRN-YGAEADIWSAGVILYILLS-G 265
DV+++ +Y ++A E L + Y ++D+WS GV+L+ +++ G
Sbjct: 175 -----RDVYEE---DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226
Query: 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
P+ G + +F+ + G+ + N S +++ +P +R + A++
Sbjct: 227 GNPYPGIAPERLFNLLKTGY---RMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 7e-08
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK---PGDVFKD 229
+ RQ+++ + Y H G++HRD+K EN + + ED L DFG + F +
Sbjct: 265 VARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFHYG 321
Query: 230 LVGSAYYVAPEVLRRN-YGAEADIWSAGVILY 260
+ G+ APEVL + Y DIWSAG++++
Sbjct: 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
R + ++LG GQFG ++ T+ K TK A K++ + VE E +M L
Sbjct: 5 RESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSM----SVEAFLAEANVMKTL 58
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA----ANLCRQMVTV 180
H +V+L A + + +I + A G L D + K + + Q+
Sbjct: 59 Q-HDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEG 114
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YV 237
+ + +HRDL+ N L S+S K DFGL+ + + + G+ + +
Sbjct: 115 MAFIEQRNYIHRDLRAANILVSASL---VCKIADFGLARVIEDNE-YTAREGAKFPIKWT 170
Query: 238 APEVLRRNYGA---EADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + N+G+ ++D+WS G++L +++ G P+ G + + A+ RG+
Sbjct: 171 APEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 220
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 2e-07
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
K ALK + E LSEEEI EM + +D D G I FEE +
Sbjct: 23 KAALKSLGEGLSEEEI---DEMIREVDKDGDGKIDFEEFLELM 62
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 29/195 (14%)
Query: 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHY-CHSMGV------------MHRDLKPE 197
+ G + ++ ++ E +L ++++T+ C+S V +HRDL
Sbjct: 149 SSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAAR 208
Query: 198 NFLFSSSAEDSPLKATDFGLS--VFFKPGDVFK-DLVGSAYYVAPE-VLRRNYGAEADIW 253
N L S E++ +K DFGL+ ++ P V K D ++APE + R Y ++D+W
Sbjct: 209 NILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 265
Query: 254 SAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML---H 309
S GV+L+ + S G P+ G F L+ + P+ ++ ++ + ML H
Sbjct: 266 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---PDYTTP--EMYQTMLDCWH 320
Query: 310 ADPKERLSAAEVLNH 324
+P +R + +E++ H
Sbjct: 321 GEPSQRPTFSELVEH 335
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 25/251 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ ++ E +E QIM L H +V L
Sbjct: 13 KLGQGCFGEVWMGTWNGTTK-VAIKTLKPGTMMP----EAFLQEAQIMKKLR-HDKLVPL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVM 190
+ + ++ + G L D + +G + ++ Q+ + Y M +
Sbjct: 67 YAVVSEE-PIYIVTEFMGKGSLLD-FLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNY 246
HRDL+ N L ++ K DFGL+ + + + G+ + + APE L +
Sbjct: 125 HRDLRAANILV---GDNLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRF 180
Query: 247 GAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIV 304
++D+WS G++L L++ G P+ G + + + + RG+ P P S +++
Sbjct: 181 TIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY----RMPCPQGCPESLHELM 236
Query: 305 KKMLHADPKER 315
K DP ER
Sbjct: 237 KLCWKKDPDER 247
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 95 FACKSISSRK--LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
FAC + + +I E I+ + H +I++LKG + LI+
Sbjct: 109 FACIDNKTCEHVVIKAGQRGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCLILPRYKT 167
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
+L+ + AK + + + R ++ + Y H ++HRD+K EN + + +
Sbjct: 168 -DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD---VCL 223
Query: 213 TDFGLSVFFKPGDV----FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSG 265
DFG + F P D+ + G+ APE+L R+ YG DIWSAG++L+ + +
Sbjct: 224 GDFGAACF--PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279
|
Length = 391 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 88/402 (21%), Positives = 146/402 (36%), Gaps = 105/402 (26%)
Query: 6 GLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGR---VLGKPM 62
S +T+ H A +++ PP + + A S G VLG+ +
Sbjct: 65 STDSGRTKSHEGAATTKQATTTPTTNVEVAPPPKKKKVTYALPNQSREEGHFYVVLGEDI 124
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD------------- 109
+ + LG G FG + K+ A K + + RD
Sbjct: 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQ 184
Query: 110 -DVEDVRREVQIMHHL---TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY 165
D D ++I + TGH IV K G L D I+ G +
Sbjct: 185 ADPADRFPLMKIQRYFQNETGHMCIVMPK----------------YGPCLLDWIMKHGPF 228
Query: 166 SERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S R A + Q + Y H+ + +MH DLKPEN L +S + T+ L P
Sbjct: 229 SHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS-DTVVDPVTNRAL-----PP 282
Query: 225 DVFK----DL-------------VGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSG- 265
D + DL V + +Y +PEV L + D+WS G I+Y L +G
Sbjct: 283 DPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342
Query: 266 ---------------------VPPFWG-----ETEQSIFDAILRGHIDFSSDPWPNISSS 299
+P W E + ++++ G + +DP +++
Sbjct: 343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSA--GQLRPCTDP-KHLARI 399
Query: 300 AK--------------DIVKKMLHADPKERLSAAEVLNHPWM 327
A+ D++ +LH D ++RL+A ++ HP++
Sbjct: 400 ARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441
|
Length = 467 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 23/261 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
E R + ++LG GQFG ++ T + A K++ + E E QIM
Sbjct: 2 EIPRESLQLIKKLGNGQFGEVWMGTWNGNTK-VAVKTLKPGTM----SPESFLEEAQIMK 56
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAA-ANLCRQMVTV 180
L H +V+L A + ++ + + G L D + +G + ++ Q+
Sbjct: 57 KLR-HDKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 114
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YV 237
+ Y M +HRDL+ N L K DFGL+ + + + G+ + +
Sbjct: 115 MAYIERMNYIHRDLRSANILVGDGL---VCKIADFGLARLIEDNE-YTARQGAKFPIKWT 170
Query: 238 APE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP- 294
APE L + ++D+WS G++L L++ G P+ G + + + + RG+ P P
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY----RMPCPQ 226
Query: 295 NISSSAKDIVKKMLHADPKER 315
+ S +++ + DP+ER
Sbjct: 227 DCPISLHELMLQCWKKDPEER 247
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 21/258 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G FG +K K + K+++ + L N ++ ++ RE +M L +
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSE---KTVAVKILKNDNNDPALKDELLREANVMQQLD-NPY 57
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
IV + G E S L+M+L G L + H +E+ L Q+ + Y
Sbjct: 58 IVRMIGICEAE-SWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA----YYVAPEVLR-R 244
+HRDL N L + K +DFGLS + + + APE +
Sbjct: 117 VHRDLAARNVLLVTQHY---AKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173
Query: 245 NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ +++D+WS GV+++ S G P+ G + I G + P D+
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG--ERMECP-QRCPPEMYDL 230
Query: 304 VKKMLHADPKERLSAAEV 321
+K ER A V
Sbjct: 231 MKLCWTYGVDERPGFAVV 248
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 27/260 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R T ++LG GQFG ++ + + A KS+ + E E +M L
Sbjct: 5 RETLKLVKKLGAGQFGEVWMGYYNGH-TKVAIKSLKQGSM----SPEAFLAEANLMKQLQ 59
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGH-YSERAAANLCRQMVTVVHY 183
H +V L A + + +I + G L D + +G + ++ Q+ + +
Sbjct: 60 -HPRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAF 117
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE 240
+HRDL+ N L S E K DFGL+ + + + G+ + + APE
Sbjct: 118 IERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 173
Query: 241 VLRRNYGA---EADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-N 295
+ NYG ++D+WS G++L I+ G P+ G T + + RG+ P P N
Sbjct: 174 AI--NYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY----RMPRPDN 227
Query: 296 ISSSAKDIVKKMLHADPKER 315
++++ P+ER
Sbjct: 228 CPEELYELMRLCWKEKPEER 247
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 71 FGRELGRGQFGVTY----LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ LG G FG Y + + K A K + R+ + +++ E +M +
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVL--REETSPKANKEILDEAYVMASV-D 67
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
H ++V L G V LI L G L D + K + + N C Q+ + Y
Sbjct: 68 HPHVVRLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE 126
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA-----YYVAPE 240
++HRDL N L + +K TDFGL+ + K+ ++A E
Sbjct: 127 EKRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDE--KEYHAEGGKVPIKWMALE 181
Query: 241 -VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
+L R Y ++D+WS GV ++ L++ G P+ G I D + +G
Sbjct: 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 4e-07
Identities = 62/280 (22%), Positives = 105/280 (37%), Gaps = 52/280 (18%)
Query: 70 IFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
G+ LG G+FG L ++ + A K++ + ++E+ E M
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKL-DIHTYSEIEEFLSEAACMKDFD- 59
Query: 127 HRNIVELKGA---------------------YEDRHSVNLIMDLCAGGELFDRIIAKGHY 165
H N+++L G + D HS L L E
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKL--------- 110
Query: 166 SERAAANLCRQMVTV---VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
L + MV + + Y + +HRDL N + ED + DFGLS
Sbjct: 111 ---PLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADFGLSKKIY 164
Query: 223 PGDVFKDLVGSAY---YVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSI 277
GD ++ + ++A E L Y +++D+W+ GV ++ I G P+ G I
Sbjct: 165 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI 224
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
+D + G+ P + D++ ADPK+R +
Sbjct: 225 YDYLRHGN--RLKQP-EDCLDELYDLMYSCWRADPKDRPT 261
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 49/281 (17%)
Query: 73 RELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
RELG+G FG+ Y +D + + A K+++ + R+ +E + E +M T H
Sbjct: 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFL-NEASVMKGFTCH 69
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSE----RAAANLCRQMVTV--- 180
++V L G ++M+L A G+L + + +E R L ++M+ +
Sbjct: 70 -HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL-QEMIQMAAE 127
Query: 181 ----VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
+ Y ++ +HRDL N + A D +K DFG++ +D+ + YY
Sbjct: 128 IADGMAYLNAKKFVHRDLAARNCMV---AHDFTVKIGDFGMT---------RDIYETDYY 175
Query: 237 ------------VAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
+APE L+ + +D+WS GV+L+ + S P+ G + + + ++
Sbjct: 176 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
G D N D+++ +PK R + E++N
Sbjct: 236 DGG---YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 6e-07
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
++F+S+D D G I+ +E + L + L S + Q+ + AD D +G +D EF A
Sbjct: 2 DQIFRSLDPDGDGLISGDEARPFL--GKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIA- 58
Query: 436 MHM 438
MH+
Sbjct: 59 MHL 61
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 9e-07
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+S E+ +++F+S+D + GT+T + K L K G L ++ + ++ AD+D +G +
Sbjct: 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGEL 61
Query: 427 DYIEFITATMHMN 439
D EF A MH+
Sbjct: 62 DKDEFALA-MHLI 73
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 9e-07
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL--VG 232
+Q++ V Y H ++HRD+K EN + D + DFG ++ F+ D VG
Sbjct: 274 KQLLCAVEYIHDKKLIHRDIKLENIFLNC---DGKIVLGDFGTAMPFEKEREAFDYGWVG 330
Query: 233 SAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
+ +PE+L + Y DIWS G+IL +LS
Sbjct: 331 TVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 24/234 (10%)
Query: 71 FGRELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
G+ LG G+FG + D+ + A K++ + R ++ED E M H
Sbjct: 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKI-AICTRSEMEDFLSEAVCMKEFD-HP 60
Query: 129 NIVELKGA------YEDRHSVNLIMDLCAGGEL-----FDRIIAKGHY-SERAAANLCRQ 176
N++ L G E S +I+ G+L + R+ Y +
Sbjct: 61 NVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTD 120
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY- 235
+ + + Y S +HRDL N + + E+ + DFGLS GD ++ +
Sbjct: 121 IASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVADFGLSKKIYNGDYYRQGRIAKMP 177
Query: 236 --YVAPEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGH 285
++A E L R Y ++D+WS GV ++ I G P+ G I+D + +G+
Sbjct: 178 VKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 40/231 (17%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF---------------ACKSISSRKLINRDD 110
R +LG GQFG +L + +F A K + R + +
Sbjct: 4 RQQLRLKEKLGEGQFGEVHLC-EAEGLAEFLGEGAPEFDGQPVLVAVKML--RADVTKTA 60
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
D +E++IM L + NI+ L G + +I + G+L + + S
Sbjct: 61 RNDFLKEIKIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTH 119
Query: 171 AN------------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
AN + Q+ + + Y S+ +HRDL N L + +K DFG+S
Sbjct: 120 ANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYT---IKIADFGMS 176
Query: 219 VFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS 264
GD ++ + G A ++A E +L + +D+W+ GV L+ + +
Sbjct: 177 RNLYSGDYYR-IQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200
+V L+ L G L D + K + N C Q+ + Y + ++HRDL N L
Sbjct: 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVL 141
Query: 201 FSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA----YYVAPEVLRRNYGAEADIWSAG 256
S +K TDFGL+ + G + +L R + ++D+WS G
Sbjct: 142 VKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYG 198
Query: 257 VILYILLS-GVPPFWGETEQSIFDAILRG 284
V ++ L++ G P+ G + I D + +G
Sbjct: 199 VTVWELMTFGAKPYDGIPAREIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLI----------NRDDV 111
R +F +LG GQFG +L QF R L+ N++
Sbjct: 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR 63
Query: 112 EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
D +EV+I+ L NI+ L G D + +I + G+L ++ ++ H ++
Sbjct: 64 NDFLKEVKILSRLK-DPNIIRLLGVCVDEDPLCMITEYMENGDL-NQFLSSHHLDDKEEN 121
Query: 172 --------------------NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211
++ Q+ + + Y S+ +HRDL N L E+ +K
Sbjct: 122 GNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV---GENLTIK 178
Query: 212 ATDFGLSVFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS 264
DFG+S GD ++ + G A ++A E +L + +D+W+ GV L+ +L
Sbjct: 179 IADFGMSRNLYAGDYYR-IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 43.5 bits (104), Expect = 3e-06
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL 402
LKE F+ D D G I FEE K L L
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 3e-06
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 26/153 (16%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LV 231
Q+ + + S +HRDL N L S E++ +K DFGL+ D++KD
Sbjct: 182 QVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLA-----RDIYKDPDYVRK 233
Query: 232 GSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
GSA ++APE + + Y ++D+WS GV+L+ + S G P+ G F L+
Sbjct: 234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK-- 291
Query: 286 IDFSSDPWPNISSSAKDIVKKML---HADPKER 315
D + P ++ I + ML DPKER
Sbjct: 292 -DGTRMRAPENATPE--IYRIMLACWQGDPKER 321
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 22/167 (13%)
Query: 166 SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225
+E +C Q + + H L + L G SV FK +
Sbjct: 15 NEEEIWAVCLQCLGALRELHRQAKSGNILLTWDGLLKL-----------DG-SVAFKTPE 62
Query: 226 VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILR 283
Y++APEV+ ++Y +ADI+S G+ LY L P+ E E S I + +L
Sbjct: 63 ---QSRPDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119
Query: 284 GHIDFSSDPWPNISS-----SAKDIVKKMLHADPKERLSAAEVLNHP 325
G N+ S +D ++ P+ R +A L H
Sbjct: 120 GMPADDPRDRSNLEGVSAARSFEDFMRLCASRLPQRREAANHYLAHC 166
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 5e-06
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYC 184
H NIV L+G +++ ++ + + G L D + K G + + + + Y
Sbjct: 65 HSNIVRLEGVITRGNTMMIVTEYMSNGAL-DSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVL 242
MG +H+ L L +S D K + F K ++ + G + APE +
Sbjct: 124 SEMGYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAI 180
Query: 243 R-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
+ ++ + +D+WS G++++ ++S G P+W + Q + A+ G
Sbjct: 181 QYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 42.4 bits (101), Expect = 7e-06
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL 402
LKE FK D D G I+FEE K L KL
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 7e-06
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 53/292 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLIN----RDDV----- 111
R F +LG GQFG +L + K + + L+ R D
Sbjct: 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAR 63
Query: 112 EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM------DLCAGGELFDRIIAKGHY 165
ED +EV+I+ L+ NI L G + +IM DL L +
Sbjct: 64 EDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQ--FLQKHVAETSGL 120
Query: 166 SERAAA-------NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ + + + Q+ + + Y S+ +HRDL N L + +K DFG+S
Sbjct: 121 ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYT---IKIADFGMS 177
Query: 219 VFFKPGDVFKDLVGSAYYVAP-------EVLRRNYGAEADIWSAGVILY-IL-LSGVPPF 269
D ++ + G A P VL + ++D+W+ GV L+ IL L P+
Sbjct: 178 RNLYSSDYYR-VQGRA--PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234
Query: 270 WGETEQSIFDAILRGHIDFSSD---PWPNISSSAKDIVKKML---HADPKER 315
T+Q + + D P P KDI + ML D ++R
Sbjct: 235 EHLTDQQVIENAGHFFRDDGRQIYLPRPPNCP--KDIYELMLECWRRDEEDR 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 8e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ FG+ LG G FG + + +D + A K + + + D+ E + E++I
Sbjct: 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKI 94
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY 165
+ HL H+NIV L GA V +I + C G+L + + K
Sbjct: 95 LSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAET 139
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 73 RELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
R +G+G FG Y L+ K A KS++ ++ + ++VE +E IM + H N
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLN--RITDLEEVEQFLKEGIIMKDFS-HPN 57
Query: 130 IVELKG-AYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSM 187
++ L G S +++ G+L + I ++ H + + Q+ + Y S
Sbjct: 58 VLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK 117
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY----------- 236
+HRDL N + E +K DFGL+ +D+ YY
Sbjct: 118 KFVHRDLAARNCMLD---ESFTVKVADFGLA---------RDIYDKEYYSVHNHTGAKLP 165
Query: 237 ---VAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPF 269
+A E L+ + + ++D+WS GV+L+ L++ G PP+
Sbjct: 166 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 3e-05
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG 403
L+E FK D D G I+ EEL+ L LG
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ + GR LG G FG + ++H + + A K + S + + + E++I
Sbjct: 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKI 93
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH 164
M HL H NIV L GA + +I + C G+L D + H
Sbjct: 94 MSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKH 137
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG-- 232
RQ++T + H +G++HRD+KPEN L + D +K DFG +V G F L G
Sbjct: 316 RQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYGML 372
Query: 233 SAYYVAPEVL 242
Y PE L
Sbjct: 373 DPRYSPPEEL 382
|
Length = 507 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 8e-05
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 41/232 (17%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLI----------NRDDV 111
R F +LG GQFG +L K + F+ ++ ++ N++
Sbjct: 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNAR 63
Query: 112 EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA- 170
D +E++IM L NI+ L + +I + G+L ++ +++ E A
Sbjct: 64 NDFLKEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDL-NQFLSRHEPQEAAEK 121
Query: 171 --------ANLC---RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ L Q+ + + Y S+ +HRDL N L ++ +K DFG+S
Sbjct: 122 ADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV---GKNYTIKIADFGMSR 178
Query: 220 FFKPGDVFKDLVGSAYYVAP-------EVLRRNYGAEADIWSAGVILYILLS 264
GD ++ + G A V P +L + +D+W+ GV L+ +L+
Sbjct: 179 NLYSGDYYR-IQGRA--VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 9e-05
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200
+V LI L G L D + K + + N C Q+ ++Y ++HRDL N L
Sbjct: 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVL 141
Query: 201 FSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYGAEADIWSAG 256
+ +K TDFGL+ + G ++A E +L R Y ++D+WS G
Sbjct: 142 VKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 198
Query: 257 VILYILLS-GVPPFWGETEQSIFDAILRG 284
V ++ L++ G P+ G I + +G
Sbjct: 199 VTVWELMTFGSKPYDGIPASEISSILEKG 227
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 18/92 (19%)
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSAY----YVAPE- 240
+HRDL N L S E++ +K DFGL+ D++KD G A ++APE
Sbjct: 195 IHRDLAARNILLS---ENNVVKICDFGLA-----RDIYKDPDYVRKGDARLPLKWMAPES 246
Query: 241 VLRRNYGAEADIWSAGVILYILLS-GVPPFWG 271
+ + Y ++D+WS GV+L+ + S G P+ G
Sbjct: 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 75 LGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG G FG Y V +T + I + + +VE E IM + H ++V
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMD-HPHLV 72
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L G ++ L+ L G L D + K + + N C Q+ + Y ++
Sbjct: 73 RLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 131
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RNY 246
HRDL N L S + +K TDFGL+ + + + G ++A E + R +
Sbjct: 132 HRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 188
Query: 247 GAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
++D+WS GV ++ L++ G P+ G + I D + +G
Sbjct: 189 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 3e-04
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
K AL ++ +LSEEE+ +F+ DTD G I+FEE L
Sbjct: 11 KRALALLGISLSEEEV---DILFREFDTDGDGKISFEEFCVLL 50
|
Length = 53 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 37.6 bits (89), Expect = 3e-04
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 375 LKEMFKSMDTDNSGTITFEELKA 397
LK++F+ DT+ G I+ EELK
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKR 23
|
Length = 25 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 104 KLINRDDV-EDVRREVQIMHHLTGHRNIV-ELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
K+ + D REV I+ L V ++ + E L+M+ G L +
Sbjct: 27 KINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEE 86
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201
+ A L ++ H + + H DL P N L
Sbjct: 87 EKEDIAEQLAELLAKL----HQLPLLVLCHGDLHPGNILV 122
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 8e-04
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY----SERAAANLCRQMVT 179
L H NIV + + + + ++ A G D I H+ SE A A + + ++
Sbjct: 55 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT--HFMDGMSELAIAYILQGVLK 112
Query: 180 VVHYCHSMGVMHRDLKPENFLFSS------SAEDSPLKATDFG--LSVFFKPGDVFKDLV 231
+ Y H MG +HR +K + L S S S L + G L V D K V
Sbjct: 113 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVH---DFPKYSV 169
Query: 232 GSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPF 269
+++PEVL++N Y A++DI+S G+ L +G PF
Sbjct: 170 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 210
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.9 bits (84), Expect = 0.001
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 410 EVRQLMEAADVDGNGTIDYIEFITATMHM 438
E+++ + D DG+G I + EF +
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 25/102 (24%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q+ + Y H GV+H+D+ N + E+ +K TD LS +DL Y
Sbjct: 125 QIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKITDNALS---------RDLFPMDY 172
Query: 236 ------------YVAPEVLRRN-YGAEADIWSAGVILYILLS 264
++A E L Y + +D+WS GV+L+ L++
Sbjct: 173 HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT 214
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 42/269 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+ RG+ G +Y QF K I+ I ++ D+ + H NIV+L
Sbjct: 698 ISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGK--------LQHPNIVKLI 749
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH-YCHSMGVMHRD 193
G LI + G L + + R A + + +H C S V+ +
Sbjct: 750 GLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRC-SPAVVVGN 808
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVL-RRNYGAE 249
L PE + +D P LS+ PG + K + SAY VAPE ++ +
Sbjct: 809 LSPEKIIID--GKDEP----HLRLSL---PGLLCTDTKCFISSAY-VAPETRETKDITEK 858
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--------HIDFSSDP--WPNISSS 299
+DI+ G+IL LL+G P + E + +I+ H+D DP ++S +
Sbjct: 859 SDIYGFGLILIELLTGKSP--ADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN 916
Query: 300 AKDIVKKM---LHA---DPKERLSAAEVL 322
+IV+ M LH DP R A +VL
Sbjct: 917 QNEIVEVMNLALHCTATDPTARPCANDVL 945
|
Length = 968 |
| >gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 74 ELGRGQFGVT--YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
E+GRG +T YL H T + I+ + + ++ ++ EV ++ H H NI+
Sbjct: 5 EIGRGFCNLTSVYLARHTPTGTLVTVR-ITDLENCTEEHLKALQNEV-VLSHFFRHPNIM 62
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM----VTVVHYCHSM 187
+ + +I A G + K ++ E + L + + ++Y H
Sbjct: 63 TSWTVFTTGSWLWVISPFMAYGSA--NSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF---KPGDVFKDLVGSAY--------- 235
G +HR++K + L S D + + GLS + + G K Y
Sbjct: 121 GYIHRNIKASHILIS---GDGLVSLS--GLSHLYSLVRNGQKAK----VVYDFPQFSTSV 171
Query: 236 --YVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPF 269
+++PE+LR++ Y ++DI+S G+ L +G PF
Sbjct: 172 LPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPF 210
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 480 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 100.0 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.96 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.96 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.96 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.95 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.95 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.92 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.91 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.91 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.91 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.91 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.9 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.9 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.88 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.88 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.87 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.85 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.85 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.84 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.82 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.79 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.79 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.79 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.77 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.76 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.76 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.75 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.73 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.71 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.7 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.7 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.62 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.56 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.55 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.55 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.53 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.48 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.48 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.47 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.47 | |
| PTZ00183 | 158 | centrin; Provisional | 99.46 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.44 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.43 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.43 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.41 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.4 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.37 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.34 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.25 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.24 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.24 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.21 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.15 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.14 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.12 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.12 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.11 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.11 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.11 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.08 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.07 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.06 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 99.05 | |
| PTZ00183 | 158 | centrin; Provisional | 99.02 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 99.02 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.96 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 98.95 | |
| PTZ00184 | 149 | calmodulin; Provisional | 98.93 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.89 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.88 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.88 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.87 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.82 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.82 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.8 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.79 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.76 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 98.74 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.72 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.71 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.67 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 98.67 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.62 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 98.61 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.59 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 98.58 | |
| KOG0041 | 244 | consensus Predicted Ca2+-binding protein, EF-Hand | 98.57 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.56 | |
| PF14658 | 66 | EF-hand_9: EF-hand domain | 98.53 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.53 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.52 | |
| KOG0040 | 2399 | consensus Ca2+-binding actin-bundling protein (spe | 98.51 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.46 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-64 Score=467.46 Aligned_cols=271 Identities=41% Similarity=0.692 Sum_probs=247.7
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChh----cHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD----DVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
..+.+.|.+.+.||+|+||.|-+|..+.+|+.||||++.++...... ....+.+|+++|++|. |||||+++++|+
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFE 246 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeee
Confidence 34678899999999999999999999999999999999877654422 2334689999999999 999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
.....||||||++||+|++.+..++.+.+..-+.+++||+.|+.|||++||+||||||+|||+..+.++..+||+|||+|
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999998878899999999999
Q ss_pred eecCCCCccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHcCCCcCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPW 293 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 293 (480)
+.........+.||||.|.|||++.. .+..++|+|||||+||-+++|.+||.+..... ..+.|.++.+.+-...|
T Consensus 327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w 406 (475)
T KOG0615|consen 327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW 406 (475)
T ss_pred hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence 99887778889999999999999863 24568999999999999999999998876555 88999999999999999
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
..++.++.+||.+||..||++|||+.++|+||||+.....+
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s 447 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCLS 447 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccc
Confidence 99999999999999999999999999999999999654433
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-61 Score=415.86 Aligned_cols=299 Identities=37% Similarity=0.722 Sum_probs=273.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.+.|.+.+.||+|.|+.||++.+..+|+.+|+|++....+.. ...+.+.+|+.|.+.|. |||||++.+.+.+.+..|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHY 86 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcC-CCcEeehhhhhcccceeE
Confidence 4577999999999999999999999999999999997665533 47799999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|+|++.|++|..-+...-.+++..+-.+++||++||.|+|.+||||||+||+|+|+.+.....-+||+|||+|..+..+
T Consensus 87 lvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred EEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 99999999999887777777999999999999999999999999999999999999999888889999999999999877
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
.....++|||.|||||+++. .|+..+|||+.||+||-|+.|.+||++.+...+++.|..+.++++.+.|+.+++++++|
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSL 246 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHH
Confidence 78888999999999999975 59999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHhh
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAE 365 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 365 (480)
|++||..||.+|+|+.|+|+|||++.........-.......+++|+.+.+++..+++.+..
T Consensus 247 vrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~s 308 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVIA 308 (355)
T ss_pred HHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999985433333333356788999999999999999887754
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-59 Score=454.86 Aligned_cols=260 Identities=35% Similarity=0.597 Sum_probs=244.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.+|..++.||+|||++||.+++..+|..||+|++.+.........+++.+||+|.++|. |||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 57999999999999999999999999999999999988888888999999999999999 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
+|+|..++|..++++.+.++|.+++.+++||+.||.|||+++|||||||..|+++ +++.+|||+|||+|..+... .
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999999999999999999999999999999999999999999999 56778999999999988744 6
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
...+.||||.|+|||++.+ +++..+||||+||+||.||.|++||...+-.+.+..|....+.+|. .+|.++++||
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI 249 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLI 249 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHH
Confidence 6788999999999999864 5999999999999999999999999999999999999999888776 6899999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
.+||.+||.+|||+.++|.|+||+....+.
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLDHPFFKSGFTPA 279 (592)
T ss_pred HHHhcCCcccCCCHHHHhcCHhhhCCCcCC
Confidence 999999999999999999999996554433
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-57 Score=418.02 Aligned_cols=257 Identities=28% Similarity=0.434 Sum_probs=227.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-eEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-SVNL 145 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-~~~l 145 (480)
.....++.||+|..|+||+++|+.+++.+|+|++.. ..+....+++.+|+++++++. ||+||++|+.|..++ .++|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEe
Confidence 456677899999999999999999999999999943 235556788999999999996 999999999999999 4999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||.||+|.+.+...++++|.....++.++++||.|||+ ++||||||||+|||+++ .+.|||||||.+..+-.+
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KGEVKICDFGVSGILVNS 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CCCEEeccccccHHhhhh
Confidence 99999999999999999999999999999999999999995 99999999999999964 666999999999987654
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE-----TEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
...+++||..|||||.+.+ .|+.++||||||++++|+++|++||... ...+++..|..+..+-... ..+|+
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~--~~fS~ 309 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE--GEFSP 309 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc--ccCCH
Confidence 5678999999999999986 5999999999999999999999999875 5677778887754432221 24899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
++++||..||++||.+|||+.|+++|||++....
T Consensus 310 ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 310 EFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 9999999999999999999999999999986644
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-56 Score=436.42 Aligned_cols=322 Identities=61% Similarity=1.045 Sum_probs=295.8
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
...+...|.+++.||+|.||+||+|+.+.+|+.+|+|++.+.........+.+.+|+.+|+++.+|||||.++++|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 34566789999999999999999999999999999999998877666677899999999999999999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC-CCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~~~ikl~Dfg~a~~ 220 (480)
.+++|||+|.||.|++.+... .+++..+..+++|++.++.|||+.||+||||||+|+|+..... ++.+|++|||++..
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999999877 4999999999999999999999999999999999999987654 45899999999999
Q ss_pred cCCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
...+......+||+.|+|||++. ..|+..+||||+|+++|.|++|.+||++.+.......+..+.+.+..++|+.++..
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISES 268 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHH
Confidence 88877788899999999999998 67999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhh
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMF 379 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F 379 (480)
++++|.+||..||.+|+|+.++|+|||++.............+..+++++.+.+++.+.......+..+ ...++.+|
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 345 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKEMF 345 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHHH
Confidence 999999999999999999999999999998767676667777788888899998888887777776665 77888889
Q ss_pred cccCCCCC
Q 011647 380 KSMDTDNS 387 (480)
Q Consensus 380 ~~~D~~~~ 387 (480)
..+|.+++
T Consensus 346 ~~~~~~~~ 353 (382)
T KOG0032|consen 346 KLMDTDNN 353 (382)
T ss_pred Hhhccccc
Confidence 99988877
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-57 Score=434.65 Aligned_cols=258 Identities=34% Similarity=0.649 Sum_probs=240.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
..+|.+++.||+|+|++|++|+++.+++.||||++.++.......++.+.+|-.+|.+|.+||+|++|+..|+++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 46799999999999999999999999999999999988877777788899999999999889999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|+||+++|+|.++|.+.|.|++..++.++.+|+.||+|||++|||||||||+|||+ ++++++||+|||.|+.+.+..
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999 678899999999999875321
Q ss_pred c--------------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC
Q 011647 226 V--------------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (480)
Q Consensus 226 ~--------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (480)
. ..+++||..|.+||++.. ..++.+|||+||||||+|+.|.+||.+.++.-++++|....+.|+.
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~ 308 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE 308 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence 1 145899999999999975 4789999999999999999999999999999999999998888775
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+++.+++||.++|..||.+|+|+.+|.+||||..-
T Consensus 309 ----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 309 ----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred ----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 688999999999999999999999999999999753
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-57 Score=418.75 Aligned_cols=257 Identities=35% Similarity=0.671 Sum_probs=238.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|.+.+.||+|+||+||.++.+++++.||+|++++.......+.+...+|..+|.+++ ||+||+++..|++.+.+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEEE
Confidence 57999999999999999999999999999999999988888888899999999999988 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec-CCCC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~-~~~~ 225 (480)
+||+.||.|+..|.+.+.+++..++.++..|+.||.|||++|||||||||+|||+ +..|+++|+|||+++.. ..+.
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999 67899999999999954 4445
Q ss_pred ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
...+++||+.|||||++. .+|+..+|.||||+++|+|++|.+||.+.+.....++|..+....+. ..++.+++++|
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~~ardll 257 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSEEARDLL 257 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCHHHHHHH
Confidence 666789999999999886 46999999999999999999999999999999999999998744333 24899999999
Q ss_pred HHhcccCcCCCC----CHHHHhcCCccccc
Q 011647 305 KKMLHADPKERL----SAAEVLNHPWMRVD 330 (480)
Q Consensus 305 ~~~L~~dp~~R~----t~~~~l~h~~~~~~ 330 (480)
.++|+.||++|. ++.++-+||||+.-
T Consensus 258 ~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 258 KKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 999999999996 78999999999853
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-56 Score=414.84 Aligned_cols=264 Identities=36% Similarity=0.677 Sum_probs=240.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|+++.++..||||.+.+..+ .....+.+..|+++|+.++ |||||++++++..++.+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEE
Confidence 34679999999999999999999999999999999987655 5667788999999999999 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC---CCeeEeecccceec
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED---SPLKATDFGLSVFF 221 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~---~~ikl~Dfg~a~~~ 221 (480)
+|||||.||+|.+++.+.+.+++.+++.++.||+.||++||+++||||||||+|||++..... ..+||+|||+|+..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999875233 67999999999999
Q ss_pred CCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.++....+.+|+|.|||||++. ++|+.|+|+||+|+++|+|++|++||...+..+++..+..+....+..+ ..+++..
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~~ 244 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNPL 244 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCch
Confidence 9888888999999999999984 6799999999999999999999999999999999988877765444322 3466777
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+|+...|+.+|.+|.+..+-+.|+++....
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 8999999999999999999999999997543
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-55 Score=389.80 Aligned_cols=254 Identities=33% Similarity=0.657 Sum_probs=239.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
..+|.+.+.||.|+||.|-+++++.+|..||+|++.+.......+++...+|..+|+.+. ||+++++++.+.+.+.+|+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEE
Confidence 357999999999999999999999999999999999988888888899999999999999 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||++||.|++++.+.+++++..++.++.||+.||+|||+++|++|||||+|||+ +.+|.+||+|||+|+.....
T Consensus 122 vmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred EEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc-
Confidence 99999999999999999999999999999999999999999999999999999999 67888999999999987643
Q ss_pred ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
..+.||||.|+|||++. .+++.++|.|||||++|||+.|.+||...+...++++|..+...+|. .+++++++||
T Consensus 198 -T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdLl 272 (355)
T KOG0616|consen 198 -TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDLL 272 (355)
T ss_pred -EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHHH
Confidence 56789999999999886 56999999999999999999999999999999999999999998876 6899999999
Q ss_pred HHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
.++|+.|-.+|. ...+|.+||||+.
T Consensus 273 ~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 273 KKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred HHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 999999999994 7889999999984
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-54 Score=420.70 Aligned_cols=260 Identities=39% Similarity=0.723 Sum_probs=235.2
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh--hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR--DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
...++|.+++.||+|+||+|+.|.+..++..||+|++.+...... ...+.+.+|+.++++++.||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345689999999999999999999999999999998776432211 345678899999999998999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+|+|||||.||+|++++.+.+++.+..++.+++||+.|++|||++||+||||||+|||++.+. +.+||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~--~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE--GNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC--CCEEEecccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999995321 78999999999987
Q ss_pred -CCCCccccCCCCcccccccccccc--C-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC-
Q 011647 222 -KPGDVFKDLVGSAYYVAPEVLRRN--Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI- 296 (480)
Q Consensus 222 -~~~~~~~~~~gt~~y~aPE~~~~~--~-~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 296 (480)
.......+.+||+.|+|||++.+. | +.++||||+||+||.|++|+.||...+...+...|..+.+.++. .+
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----~~~ 247 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----YLL 247 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC----CcC
Confidence 466677889999999999999763 4 68999999999999999999999999999999999998887765 34
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
|+++++|+.+||..||.+|+|+.++++||||+.
T Consensus 248 S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 248 SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999999999999999999999999997
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-54 Score=423.20 Aligned_cols=258 Identities=36% Similarity=0.681 Sum_probs=241.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+-|++++.||.|+.|.|-+|++..||+.+|||++.+...........+.+||.+|+-+. ||||+++|++|++..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEEE
Confidence 45999999999999999999999999999999998875555556678999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
.||++||.|++++..+|++++.+++++++||+.|+.|||..+|+||||||+|+|+ +..++|||+|||+|..-.++..
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 4556699999999998888888
Q ss_pred cccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
..+.||+|.|.|||++.|. .+.++||||.|||||.||||++||.+.+...++.++.+|.+..|. .+|+++++||
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs----~Is~eaQdLL 243 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS----NISSEAQDLL 243 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC----cCCHHHHHHH
Confidence 8899999999999999864 588999999999999999999999999999999999999988774 7999999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.+||..||++|+|.++|++|||++....
T Consensus 244 r~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 244 RRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred HHHhccCccccccHHHHhhCchhhcCCC
Confidence 9999999999999999999999976544
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-54 Score=413.34 Aligned_cols=260 Identities=32% Similarity=0.568 Sum_probs=236.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|.+++.||+|+||.||+|+-+.||..||+|++++.......+++.++.|-.+|.... +|.||+++..|++..++||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeEE
Confidence 467999999999999999999999999999999999998888899999999999999965 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC--
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-- 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-- 223 (480)
||||++||++..+|.+.+.|++..++.++.+++.|++.||..|+|||||||+|+|| +..|++||+|||++..+..
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999 6789999999999853211
Q ss_pred --------------------CC-c-------------------------cccCCCCccccccccccc-cCCCchhHHHHH
Q 011647 224 --------------------GD-V-------------------------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAG 256 (480)
Q Consensus 224 --------------------~~-~-------------------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 256 (480)
.+ . ....+|||.|||||++.+ +|+..+|.||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 00 0 012589999999999865 599999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHhcCCccccc
Q 011647 257 VILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRVD 330 (480)
Q Consensus 257 ~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~h~~~~~~ 330 (480)
||+||||.|.+||.+.++.+.+++|.+....+..+.-..++.++.+||.+||. ||++|. +++||.+||||+.-
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 99999999999999999999999999888666555556788999999999999 999998 59999999999854
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=420.13 Aligned_cols=257 Identities=30% Similarity=0.562 Sum_probs=239.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|.+.+.||+|+||+|+++..+.+++.||||++++......++++..+.|..|+....+||++++++.+|++.+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 34679999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-C
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-P 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~ 223 (480)
+||||+.||++ ..+...+.|++..++.|+..|+.||.|||++||||||||.+|||+ +.+|++||+|||+++... .
T Consensus 446 fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCCC
Confidence 99999999994 445566789999999999999999999999999999999999999 678899999999999754 5
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
+....+++|||.|||||++.+ .|+.++|.|||||+|||||.|..||.+.+++++++.|......+|. .+|.++.+
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~ 597 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIA 597 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHH
Confidence 566788999999999999976 5999999999999999999999999999999999999998887775 68999999
Q ss_pred HHHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 303 IVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 303 li~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+++++|.++|++|.. +++|..||||+.
T Consensus 598 il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLGSGERDAEDIKKHPFFRS 629 (694)
T ss_pred HHHHHhccCcccccCCCCCCchhhhhCCcccc
Confidence 999999999999995 588999999984
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-55 Score=385.67 Aligned_cols=295 Identities=34% Similarity=0.646 Sum_probs=254.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-----ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
+-..|.-.+.||+|..++|.++.++.+|..+|+|++...... ...-.+.-.+|+.||+++.+||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 345678889999999999999999999999999998643211 112346678899999999999999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
+..+++|+|+|+.|.|++++.+.-.++++..++|++|+++|++|||.++||||||||+|||+ +++.+|||+|||+++
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFAC 171 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999 677889999999999
Q ss_pred ecCCCCccccCCCCcccccccccc-------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
.+.++......||||+|+|||.++ .+|+..+|+||+|+|||.|+.|.+||+.....-++..|..+.+.|..+.
T Consensus 172 ~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe 251 (411)
T KOG0599|consen 172 QLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE 251 (411)
T ss_pred ccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence 999999999999999999999874 2588899999999999999999999999988899999999999999999
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCC---c-ccHHHHHHHHhhhhhhHHHHHHHHH
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK---P-LDIAVLTRMKQFRAMNKLKKVALKV 362 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~ 362 (480)
|.++|...++||++||+.||.+|+|+.++|.||||........+ + .....+.+.-.++++.+++-.++..
T Consensus 252 Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP~~~~~~~k~qt~~~aRkrFk~ail~v 325 (411)
T KOG0599|consen 252 WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSPVVEVELVKDQTSERARKRFKVAILTV 325 (411)
T ss_pred hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCCCcchhhhhhhhhHHhhhheeeeeehH
Confidence 99999999999999999999999999999999999543222221 1 1122333333445555555444433
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-55 Score=389.98 Aligned_cols=256 Identities=29% Similarity=0.553 Sum_probs=221.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|....++|+|+||+||+|+++.||+.||||.+..+. .++.-.+-..||+++|++|. |||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 35888899999999999999999999999999986433 23333455789999999999 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~ 224 (480)
+|||+. ++.+.+.. ...++.+.+..+++|++.|+.|||++++|||||||+|||| ..++.+||||||+|+.+. ++
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCCc
Confidence 999976 45455554 4569999999999999999999999999999999999999 567889999999999887 78
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC----------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~---------------- 286 (480)
+.++..+.|.+|+|||.+.| +|+..+||||+||++.||++|.+.|.+.++-+.+..|.....
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 88899999999999999876 599999999999999999999999999988777665532111
Q ss_pred ---cCCC--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 287 ---DFSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 287 ---~~~~--------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.+|. ..++.++.-+.+|+..||+.||.+|++.+++|.||||.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 1111 12467788899999999999999999999999999994
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-54 Score=407.20 Aligned_cols=263 Identities=30% Similarity=0.508 Sum_probs=227.6
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-e
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-S 142 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-~ 142 (480)
.+-++|.++++||.|+||.||+|+.+.++..||||.+++. +...++.-. .||++.|+++..|||||++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K-f~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK-FYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh-hccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 3457899999999999999999999999999999998753 334433333 489999999999999999999998888 9
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+|+||||| ..+|+++++.. +.|++..++.|++||++||+|+|.+|+.|||+||+|||+. ....|||+|||+|+.+
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEeccccccccc
Confidence 99999999 56999999765 4599999999999999999999999999999999999995 3667999999999999
Q ss_pred CCCCccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC--------------
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------------- 285 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~-------------- 285 (480)
.....++..+.|.+|+|||++- +.|+.+.||||+|||++|+++-++.|.|.++.+.+.+|..-.
T Consensus 161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 8888899999999999999874 459999999999999999999999999998877776664311
Q ss_pred -----CcCCCC-------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 286 -----IDFSSD-------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 286 -----~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+.++.. ..+..++++.++|.+||.+||.+||||+++|+||||+....
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 111111 13457899999999999999999999999999999987544
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-53 Score=406.59 Aligned_cols=254 Identities=31% Similarity=0.576 Sum_probs=233.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+... +..+...+++|++|++.++ |||||.++++|+...++++|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence 468999999999999999999999999999999987654 4556788999999999999 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
.|||.| +|+.++...+.++|+.+..++.+++.||.|||+++|+|||+||.|||+ +.++++|+||||+|+....+.
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence 999977 999999999999999999999999999999999999999999999999 678899999999999876544
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
..+.+-|||.|||||+..+ .|+..+|+|||||++||+++|++||.........+.|......++. ..+..+.+|+
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~----~~S~~f~nfl 231 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS----TASSSFVNFL 231 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc----cccHHHHHHH
Confidence 3456789999999999875 5999999999999999999999999999888888888887665544 7899999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCccccc
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+|.+||.+|+|+.+++.|||.+..
T Consensus 232 ~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHhhcChhhcccHHHHhcChHHhhh
Confidence 99999999999999999999999753
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-52 Score=394.44 Aligned_cols=265 Identities=28% Similarity=0.499 Sum_probs=227.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--Ce
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~ 142 (480)
..+.|..+++||+|.||.||+|++..+|+.||+|.+..... ......-..|||.||++|. ||||++|.+...+. +.
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCce
Confidence 34679999999999999999999999999999999976543 3344566789999999998 99999999988766 78
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+|+|+|||+. +|.-++...+ .|++.+++.+++||+.||+|||++||+|||||.+|||| +.++.+||+|||+|+++
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeec
Confidence 9999999965 8888877644 69999999999999999999999999999999999999 66888999999999987
Q ss_pred CCCC--ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC----
Q 011647 222 KPGD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW---- 293 (480)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 293 (480)
.... .++..+-|.+|+|||.+.| .|+.++|+||.||||.||++|++.|.+.++.+.+..|...........|
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 6543 4677889999999998865 5999999999999999999999999999999888888553322222222
Q ss_pred ---------------------CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 294 ---------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 294 ---------------------~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
..+++.+.+|+..||..||.+|.||.++|+|+||.....+.+
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~ 411 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCD 411 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCC
Confidence 245788999999999999999999999999999966555443
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-53 Score=376.28 Aligned_cols=246 Identities=29% Similarity=0.546 Sum_probs=216.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEE-EEEeCC-eE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG-AYEDRH-SV 143 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~-~~~~~~-~~ 143 (480)
...|.+.++||+|+||+||++.+..+|..||.|.+.- ...+....+.+..|+.+|++|. |||||++++ .+.++. .+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f-~~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF-GMMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch-hhccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhh
Confidence 4579999999999999999999999999999999974 4446667788999999999999 999999998 444444 49
Q ss_pred EEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--cC--CeecCCCCcceecccCCCCCCeeEeec
Q 011647 144 NLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHS--MG--VMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~--~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
+||||||.+|+|...++. .+.+++..+|+++.|++.||.++|+ .. |+||||||.||++ +.++.+||+||
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDf 172 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDF 172 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccc
Confidence 999999999999988864 4569999999999999999999999 45 9999999999999 56788999999
Q ss_pred ccceecCCCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 216 GLSVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 216 g~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
|+++.+..... ..+.+|||.||+||.+.+ +|+.+|||||+||++|||+.-++||.+.+-.++..+|.++..+ .-+-
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~--~~p~ 250 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP--PLPD 250 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC--CCcH
Confidence 99998865543 356899999999999875 6999999999999999999999999999999999999998653 2222
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSA 318 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~ 318 (480)
..+|.++..+|..|+.+||+.||+.
T Consensus 251 ~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHhhhHHHHHHHHHccCCcccCCCc
Confidence 4688999999999999999999986
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-52 Score=363.97 Aligned_cols=261 Identities=31% Similarity=0.518 Sum_probs=224.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.+|...+.||+|.||+||+|++..+|+.||||.++.....+.- .-...|||+.|+.+. |+||+.++++|...+.+.+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-NRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-cHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 4688899999999999999999999999999999866443322 245679999999999 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
+||++ .+|+..+... ..++...++.|+.+++.||+|||++.|+||||||+|+|+ +.++.+||+|||+|+.+.+..
T Consensus 80 fEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence 99995 4998888765 459999999999999999999999999999999999999 567889999999999876433
Q ss_pred -ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC----------
Q 011647 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP---------- 292 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---------- 292 (480)
.....+-|.+|+|||.+-| .|+..+||||.|||+.||+.|.+-|.|.++-+.+..|.+.-.......
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 3344488999999998754 599999999999999999999999999999888888765433333332
Q ss_pred --------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 293 --------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 293 --------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
++..+.++.+|+.+||..||.+|+|+.|+|+|+||+....+
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p 290 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP 290 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence 33457888999999999999999999999999999964433
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=388.04 Aligned_cols=261 Identities=34% Similarity=0.634 Sum_probs=226.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh-----------hcHHHHHHHHHHHHHccCCCCeeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----------DDVEDVRREVQIMHHLTGHRNIVEL 133 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~hp~iv~~ 133 (480)
..+.|.+++.||+|.||+|-+|++..+++.||||++.+...... ..++++++||.+|++|. |||||+|
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~L 173 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKL 173 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEE
Confidence 45789999999999999999999999999999999976543221 22578999999999999 9999999
Q ss_pred EEEEEeC--CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 134 KGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 134 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
+++..+. +.+|||+|||..|.+...-.....+++.+++.|+++++.||+|||.+|||||||||+|+|+ ++++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTVK 250 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcEE
Confidence 9998754 5799999999998885433222239999999999999999999999999999999999999 5678999
Q ss_pred EeecccceecCCC------CccccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 011647 212 ATDFGLSVFFKPG------DVFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA 280 (480)
Q Consensus 212 l~Dfg~a~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~ 280 (480)
|+|||.+.....+ ......+|||.|+|||.+.+ ..+.+.||||+||+||.|+.|+.||.+....+.+++
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K 330 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK 330 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence 9999999876322 23445789999999998754 147789999999999999999999999999999999
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
|.+....++.. +.+.+++++||.+||.+||++|+++.++..|||...+.
T Consensus 331 Ivn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g 379 (576)
T KOG0585|consen 331 IVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG 379 (576)
T ss_pred HhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence 99998888775 47889999999999999999999999999999998763
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-52 Score=369.13 Aligned_cols=267 Identities=37% Similarity=0.710 Sum_probs=239.2
Q ss_pred ccccceeec-ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE----
Q 011647 64 DVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE---- 138 (480)
Q Consensus 64 ~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~---- 138 (480)
.+.+.|.+. +.||-|-.|+|..+.++.|++.+|+|++.. ..+.++|+++.....+|||||.++++|+
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 356778775 568999999999999999999999999853 2678899999888889999999999875
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...++.+|||.|+||.|++.+...+. |+|.++..|++||+.|+.|||+.+|.||||||+|+|.+....+..+||+|||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccc
Confidence 34568899999999999999998776 9999999999999999999999999999999999999998899999999999
Q ss_pred cceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcCCCcCCCC
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSD 291 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~~~~~~~~ 291 (480)
+|+.-.......+-+-||+|.|||++.. .|+..+|+||+||++|-|++|.+||+... ...+..+|..+.+.|+.+
T Consensus 210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 9998665556677788999999999974 59999999999999999999999997754 356778899999999999
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcc
Q 011647 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (480)
Q Consensus 292 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~ 338 (480)
.|..+|++++++|+.+|..+|.+|.|++++++|||+......-..++
T Consensus 290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl 336 (400)
T KOG0604|consen 290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPL 336 (400)
T ss_pred hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCc
Confidence 99999999999999999999999999999999999987665555444
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-52 Score=383.25 Aligned_cols=261 Identities=33% Similarity=0.641 Sum_probs=244.9
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
....+.+|.+.+.||+|.||+|-+|.....|+.||||.+++.+..+..+.-.+++||+||..|+ ||||+.+|++|+..+
T Consensus 48 khnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkd 126 (668)
T KOG0611|consen 48 KHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKD 126 (668)
T ss_pred ccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCc
Confidence 3456789999999999999999999999999999999999999988888899999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+.|||||..+|.|++++...+.+++.+++.+++||..|+.|||.++++|||||.+|||+ +.++++||+|||++..+
T Consensus 127 KIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLY 203 (668)
T ss_pred eEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999 66788999999999999
Q ss_pred CCCCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.......++||+|.|.+||+++|. -++.+|.||||++||.|..|..||.+.+...++..|.++.+..+. -|.+
T Consensus 204 ~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-----~PSd 278 (668)
T KOG0611|consen 204 ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-----TPSD 278 (668)
T ss_pred ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-----CCch
Confidence 888888999999999999999875 488999999999999999999999999999999999998876544 4678
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.-||++||..+|++|.|++++..|-|+.-.+
T Consensus 279 A~gLIRwmLmVNP~RRATieDiAsHWWvNwgy 310 (668)
T KOG0611|consen 279 ASGLIRWMLMVNPERRATIEDIASHWWVNWGY 310 (668)
T ss_pred HHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence 99999999999999999999999999997543
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=376.60 Aligned_cols=260 Identities=32% Similarity=0.577 Sum_probs=235.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|++++.||.|.-|+||+|+.+.++..+|+|++.+..........++..|-+||..+. ||.++.||..|+.+...|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEE
Confidence 57899999999999999999999999999999999888877777888999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-
Q 011647 147 MDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~- 223 (480)
||||+||+|..+++++ +.+++..++.++..++.||+|||-.|||+|||||+|||| .++|+|.|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCCC
Confidence 9999999999988764 569999999999999999999999999999999999999 7899999999998753210
Q ss_pred --------------------------------C-C-----------------------ccccCCCCccccccccccc-cC
Q 011647 224 --------------------------------G-D-----------------------VFKDLVGSAYYVAPEVLRR-NY 246 (480)
Q Consensus 224 --------------------------------~-~-----------------------~~~~~~gt~~y~aPE~~~~-~~ 246 (480)
. . ....++||-.|.|||+++| +.
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 0123579999999999987 48
Q ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCC----HHHHh
Q 011647 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS----AAEVL 322 (480)
Q Consensus 247 ~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~~~l 322 (480)
+.++|.|+||+++|||+.|..||.+.+..+.+.+|......|+..+ .++..+++||+++|.+||.+|.. ++||.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 9999999999999999999999999999999999999988888764 78999999999999999999998 99999
Q ss_pred cCCcccccCC
Q 011647 323 NHPWMRVDGD 332 (480)
Q Consensus 323 ~h~~~~~~~~ 332 (480)
+||||+-.+.
T Consensus 391 ~HpFF~gVnW 400 (459)
T KOG0610|consen 391 RHPFFEGVNW 400 (459)
T ss_pred cCccccCCCh
Confidence 9999986544
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=386.88 Aligned_cols=257 Identities=34% Similarity=0.573 Sum_probs=215.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--eEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--SVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 144 (480)
.+|..++.||+|+||+||++.+..+|...|||.+.... ....+.+.+|+.+|.++. |||||++++...... .++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeE
Confidence 45888999999999999999999999999999986542 222678999999999999 999999999754444 699
Q ss_pred EEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++|||+++|+|.+++.+.+ .+++..++.+++||++||.|||++|||||||||+|||++.. ++.+||+|||++.....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC--CCeEEeccCcccccccc
Confidence 9999999999999999877 79999999999999999999999999999999999999531 56799999999987653
Q ss_pred ----CCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 224 ----GDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 224 ----~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
........||+.|||||++... ..+++|||||||++.||+||..||.. ....+.+-.+..... .| .....+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~-~P-~ip~~l 248 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDS-LP-EIPDSL 248 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCC-CC-CCCccc
Confidence 1223457899999999999743 33599999999999999999999987 333333333333331 11 223468
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
|+++++||.+||..||++|||+.++|+|||.+...
T Consensus 249 s~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 249 SDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 99999999999999999999999999999997654
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=377.34 Aligned_cols=270 Identities=32% Similarity=0.557 Sum_probs=229.8
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe---
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--- 139 (480)
..+..+|...+.||+|+||.|+.|.++.+|..||||.+.. .+.+....++..||+++|+.++ |+||+.+.+++..
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSR 95 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHhc-CCCcceEEeecccccc
Confidence 3455677778999999999999999999999999999863 3455667789999999999999 9999999998854
Q ss_pred --CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
-..+|+|+|+| +.+|...+..+..+++..+..+++||++||.|+|+.||+||||||+|+|++ .+..+||||||+
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n---~~c~lKI~DFGL 171 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN---ADCDLKICDFGL 171 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec---cCCCEEeccccc
Confidence 35699999999 679999888888899999999999999999999999999999999999995 566699999999
Q ss_pred ceecCC---CCccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc---------
Q 011647 218 SVFFKP---GDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--------- 283 (480)
Q Consensus 218 a~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~--------- 283 (480)
|+.... ....+..+.|.+|.|||++. ..|+.+.||||+|||+.||++|++.|.|.+.-..+..|..
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 998753 33456778999999999874 4699999999999999999999999988776554444422
Q ss_pred --------------CCCcCCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcc
Q 011647 284 --------------GHIDFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (480)
Q Consensus 284 --------------~~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~ 338 (480)
.....+.. .+++.++.+.+|+.+||..||.+|+|++|+|+||||...-++.+.+.
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~ 324 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPV 324 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCC
Confidence 11222222 25688999999999999999999999999999999998888777664
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=379.16 Aligned_cols=261 Identities=30% Similarity=0.459 Sum_probs=229.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|.+...||.|..++||+|+...++..||||++...+..+ ..+.+++|+..++.++ ||||++++..|..+..+|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEE
Confidence 467999999999999999999999999999999998766533 3789999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||.||.+|++.+++... ..++|..+..|+++++.||.|||.+|.||||||+.|||| +.+|.|||+|||.+..+..
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeecc
Confidence 99999999999999864 349999999999999999999999999999999999999 6788899999998776543
Q ss_pred CC-----ccccCCCCcccccccccc---ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC------
Q 011647 224 GD-----VFKDLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (480)
Q Consensus 224 ~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (480)
.. .+..++||++|||||++. .+|+.|+||||||++..||.+|..||....+..++-..+++.++.+
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence 22 125679999999999964 3599999999999999999999999999888887777777666432
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
......++..++.+|..||.+||.+|||++++|+|+||+....
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 2233457889999999999999999999999999999986543
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-52 Score=358.19 Aligned_cols=257 Identities=33% Similarity=0.641 Sum_probs=236.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+++.||+|-||.||+|+.+.++..||+|++.++.......-.++++|++|-..|+ ||||+++|++|.+...+|
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIY 98 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeE
Confidence 3467999999999999999999999999999999998877666666678999999999999 999999999999999999
Q ss_pred EEEecCCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++||..+|+|+..|. ...++++..++.+++|++.||.|+|.++||||||||+|+|++ ..+.+||+|||.+....
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCCCceeecC
Confidence 9999999999999998 567799999999999999999999999999999999999995 45669999999998765
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.....+.+||..|.|||+..+ .++..+|+|++|++.||++.|.+||......+.+..|....+.+| ..++.+++
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~ 250 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAA 250 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHH
Confidence 555678899999999999876 489999999999999999999999999999999999999888777 47899999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
++|.+||..+|.+|.+..|++.|||....
T Consensus 251 dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 251 DLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 99999999999999999999999998643
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-51 Score=396.01 Aligned_cols=257 Identities=30% Similarity=0.550 Sum_probs=224.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|....+||+|+.|.||.|....+++.||||.+....- ...+-+.+|+.+|+... |+|||++++.|..++.++
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDELW 346 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhcc-chHHHHHHHHhcccceeE
Confidence 34568888999999999999999999999999999965432 33477899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+||+|.+.+.. ..++|.++..|+++++.||+|||.+||+|||||.+|||+ +.++.+||+|||++..+...
T Consensus 347 VVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred EEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeeccccc
Confidence 99999999999887654 459999999999999999999999999999999999999 45667999999999887654
Q ss_pred C-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc-CCCcCCCCCCCCCCHHHH
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 301 (480)
. ...+.+|||+|||||+... .|++++||||||++++||+-|.+||...++...+..|.. +.+.+ .....+|+.++
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~l--k~~~klS~~~k 500 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKL--KNPEKLSPELK 500 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCc--CCccccCHHHH
Confidence 4 5677899999999999865 699999999999999999999999997776655555544 33333 33468999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+|+.+||..|+++|+++.++|+||||+...
T Consensus 501 dFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 501 DFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred HHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 999999999999999999999999996553
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-50 Score=364.91 Aligned_cols=266 Identities=27% Similarity=0.410 Sum_probs=223.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE--eCCeE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DRHSV 143 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--~~~~~ 143 (480)
.+.|..+.+|++|+||.||+|+++.++..||+|.++....... .--...|||.+|.+++ |||||.+-++.. .-+.+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G-FPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG-FPITSLREINILLKAR-HPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC-CcchhHHHHHHHHhcC-CCCeeeeEEEEecccccee
Confidence 3569999999999999999999999999999999986552221 1123568999999999 999999998875 44579
Q ss_pred EEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|||||||+. +|..++...+ +|...+++.++.|++.||+|||.+.|+||||||+|+|+ ...|.+||+|||+|+.+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYG 228 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhhc
Confidence 999999965 9999888765 79999999999999999999999999999999999999 457779999999999876
Q ss_pred CC-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCC-----
Q 011647 223 PG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----- 294 (480)
Q Consensus 223 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (480)
.. ...+..+-|.+|+|||.+-+ .|++++|+||+|||+.||+++++.|.+..+.+.++.|.+.........|+
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 44 34677889999999998865 49999999999999999999999999999988888875432222211111
Q ss_pred -----------------------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCc
Q 011647 295 -----------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337 (480)
Q Consensus 295 -----------------------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~ 337 (480)
.++....+|+..+|..||.+|.|+.|+|+|+||.....+.+..
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~ 374 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPS 374 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChh
Confidence 2457888999999999999999999999999999765555443
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=389.08 Aligned_cols=254 Identities=33% Similarity=0.633 Sum_probs=226.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|.+.+.||+|+||.||+|+++.+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+++.+|+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEE
Confidence 367999999999999999999999999999999997654444455677899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+.|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 96 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred EEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCC-
Confidence 99999999999999988899999999999999999999999999999999999999 45678999999999876432
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++. .++..+++||
T Consensus 172 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li 246 (329)
T PTZ00263 172 -TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN----WFDGRARDLV 246 (329)
T ss_pred -cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC----CCCHHHHHHH
Confidence 234579999999999865 4789999999999999999999999988888888888777655432 4789999999
Q ss_pred HHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 305 KKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
.+||+.||.+|++ ++++++||||+.
T Consensus 247 ~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 247 KGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 9999999999997 799999999975
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=382.56 Aligned_cols=253 Identities=30% Similarity=0.574 Sum_probs=224.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+.+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEE
Confidence 36899999999999999999999999999999987544333344567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCC--
Confidence 9999999999999988899999999999999999999999999999999999999 45677999999999865432
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++. .+++.+++||.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~ 230 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIK 230 (291)
T ss_pred cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHHHHHHHH
Confidence 234579999999998865 4789999999999999999999999998888888888777665543 46899999999
Q ss_pred HhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 306 KMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+||+.||.+|++ ++++++||||+.
T Consensus 231 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 231 KLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred HHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 999999999995 999999999974
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-49 Score=387.17 Aligned_cols=249 Identities=33% Similarity=0.598 Sum_probs=220.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.++.+|+.||||++.+...........+.+|+.+++++. ||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455677889999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~ 231 (480)
++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++... ........+
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCCccccee
Confidence 9999999988899999999999999999999999999999999999999 456779999999987532 223334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++ ..+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999865 589999999999999999999999998888877777777665544 36899999999999999
Q ss_pred CcCCCC-----CHHHHhcCCcccc
Q 011647 311 DPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~-----t~~~~l~h~~~~~ 329 (480)
||++|| ++.++++||||+.
T Consensus 233 dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred CHHHcCCCCCCCHHHHHcCCCcCC
Confidence 999999 8999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-49 Score=389.56 Aligned_cols=259 Identities=28% Similarity=0.498 Sum_probs=221.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++.+.||+|+||+||+|.++.+++.||||++.+...........+.+|+.++.++. ||||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence 36899999999999999999999999999999997654444445577889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
||||+||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccccccc
Confidence 9999999999999988899999999999999999999999999999999999999 456789999999987543210
Q ss_pred -----------------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCC
Q 011647 226 -----------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPF 269 (480)
Q Consensus 226 -----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf 269 (480)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0123579999999999864 5899999999999999999999999
Q ss_pred CCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcC---CCCCHHHHhcCCccccc
Q 011647 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPK---ERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~---~R~t~~~~l~h~~~~~~ 330 (480)
.+....+....+.........++...++++++++|.+|+. +|. .||+++++++||||+..
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 237 CSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 9988888888777644333333334688999999999775 444 45899999999999743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-49 Score=376.35 Aligned_cols=258 Identities=28% Similarity=0.484 Sum_probs=215.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|++.+.||+|+||+||+|.+..+++.||+|.+.............+.+|+.++.++. |+||+++++++.+.+.+++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEE
Confidence 3788899999999999999999999999999987654433334456789999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++|+|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCC
Confidence 999999998877543 358999999999999999999999999999999999999 456779999999998765544
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+..............+++++.+||
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 236 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSIC 236 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHH
Confidence 4456689999999999864 589999999999999999999999987654322222222111112222346899999999
Q ss_pred HHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 305 KKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
.+||+.||.+||+ ++++++||||+.
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 237 RMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred HHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 9999999999997 899999999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-49 Score=390.03 Aligned_cols=259 Identities=29% Similarity=0.550 Sum_probs=224.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|++..+++.||||++.............+.+|+.++..+. ||||+++++++.+++.+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEE
Confidence 36899999999999999999999999999999997654444445577889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecccccc
Confidence 9999999999999988899999999999999999999999999999999999999 557789999999987543211
Q ss_pred --------------------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCC
Q 011647 226 --------------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGV 266 (480)
Q Consensus 226 --------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~ 266 (480)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0012469999999998864 5899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHhcCCccccc
Q 011647 267 PPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRVD 330 (480)
Q Consensus 267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~h~~~~~~ 330 (480)
.||...........+......+..+....+++++.+||.+||. +|.+|++ +.++++||||+..
T Consensus 237 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 237 PPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999888877777776654444433334679999999999997 9999998 9999999999853
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=357.93 Aligned_cols=264 Identities=37% Similarity=0.661 Sum_probs=234.1
Q ss_pred cceee-cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 67 NTYIF-GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 67 ~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
+-|++ .+.||+|+|+.|-.+....+|..||||++.+.. .....++.||++++.++.+|+||++++++|+++..+|+
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL 153 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL 153 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence 44655 467999999999999999999999999997753 34457899999999999999999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||.|.||.|...|.+...|++.++..++++|+.||++||.+||.||||||+|||....+.-..||||||.+..-+....
T Consensus 154 VfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred EEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999877777789999999876543221
Q ss_pred --------ccccCCCCcccccccccc---c---cCCCchhHHHHHHHHHHHHhCCCCCCCCC---------------hHH
Q 011647 226 --------VFKDLVGSAYYVAPEVLR---R---NYGAEADIWSAGVILYILLSGVPPFWGET---------------EQS 276 (480)
Q Consensus 226 --------~~~~~~gt~~y~aPE~~~---~---~~~~~~DiwslG~il~~lltg~~pf~~~~---------------~~~ 276 (480)
...+.+|+..|||||+.. + .|+.++|.||||+|||-||+|.+||.+.. .+.
T Consensus 234 ~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~ 313 (463)
T KOG0607|consen 234 DCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 313 (463)
T ss_pred CCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHH
Confidence 233457889999999753 2 48999999999999999999999997643 257
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
++..|..+.+.||...|..+|.+++++|+.+|..|+.+|.++.++++|||++.....
T Consensus 314 LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 314 LFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 888999999999999999999999999999999999999999999999999865443
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-49 Score=383.85 Aligned_cols=257 Identities=31% Similarity=0.505 Sum_probs=224.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|.+.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+. ||||+++++++...+..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEE
Confidence 36999999999999999999999999999999997654433445577889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~--~ 154 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVT--Y 154 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccc--c
Confidence 9999999999999888899999999999999999999999999999999999999 4567899999999986543 3
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC----CCCCHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW----PNISSSAK 301 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 301 (480)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+.........+.+ ..++.++.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 234 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234 (333)
T ss_pred cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence 345679999999999865 5899999999999999999999999988887777766554332222222 25789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
++|.+||..+|.+||++.++++||||+.
T Consensus 235 ~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 235 DLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred HHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 9999999999999999999999999984
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=383.17 Aligned_cols=254 Identities=32% Similarity=0.593 Sum_probs=225.0
Q ss_pred ccceeecceecccCCeEEEEEEEcCCC-ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
.+.|.+.+.||+|+||.||+|.+..++ ..||+|.+...........+.+.+|+.+++.+. ||||+++++++.+++.++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEE
Confidence 357999999999999999999977654 689999987654444455677889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCC
Confidence 999999999999999988899999999999999999999999999999999999999 45778999999999875432
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++ +.+++.+.++
T Consensus 185 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 258 (340)
T PTZ00426 185 --TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNNCKHL 258 (340)
T ss_pred --cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHH
Confidence 245679999999999865 488999999999999999999999999888888888877765543 3578999999
Q ss_pred HHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 304 VKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
|.+||+.||++|+ +++++++||||+.
T Consensus 259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred HHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 9999999999995 8999999999974
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-48 Score=379.74 Aligned_cols=258 Identities=24% Similarity=0.395 Sum_probs=209.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|.+++.||+|+||+||+|.+..+++.||||++.... .......+.+|+++++.+. |+||+++++++...+.++
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEE
Confidence 3467889999999999999999999999999999985432 2334567899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+.+++|.+. ...++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 149 lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 149 VLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceecccc
Confidence 99999999998643 346788889999999999999999999999999999999 45678999999999876432
Q ss_pred C-ccccCCCCccccccccccc------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
. ......||..|+|||++.. ..+.++|||||||++|+|++|+.||...........+..............++
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATAS 301 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccC
Confidence 2 2345679999999998742 24568999999999999999999997433222221111111111122234678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.++.+||.+||+.||++|||+.|+|+||||.....
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 99999999999999999999999999999987643
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-48 Score=388.97 Aligned_cols=258 Identities=30% Similarity=0.527 Sum_probs=219.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+++.||+|+||+||+|.+..+++.||||++...........+.+.+|+.+++++. ||||+++++++.+.+.+++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEE
Confidence 5889999999999999999999999999999997655545556678999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC--
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-- 225 (480)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccccccccc
Confidence 999999999999988899999999999999999999999999999999999999 456789999999975321000
Q ss_pred ----------------------------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHH
Q 011647 226 ----------------------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVI 258 (480)
Q Consensus 226 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 258 (480)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0123579999999998864 58999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc--cCcCCCCCHHHHhcCCcccc
Q 011647 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH--ADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 259 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~--~dp~~R~t~~~~l~h~~~~~ 329 (480)
+|||++|..||...........+.........+....+++++.+||.+||. .+|..|+++.++++||||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 999999999999887766666665433333334445689999999999654 45556999999999999974
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=378.78 Aligned_cols=248 Identities=30% Similarity=0.580 Sum_probs=218.7
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||+|+||+||+|.+..+++.||+|++.............+.+|+.++.++. ||||+++++++...+..++||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999999999999999997654444455677889999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCCCC
Q 011647 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLVGS 233 (480)
Q Consensus 155 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~gt 233 (480)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+||
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999888899999999999999999999999999999999999999 4567799999999875432 2233446799
Q ss_pred ccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCc
Q 011647 234 AYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312 (480)
Q Consensus 234 ~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 312 (480)
+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++++.++|.+||..||
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp 232 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSRDP 232 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCCCH
Confidence 99999998865 489999999999999999999999999888888887777655443 3688999999999999999
Q ss_pred CCCC---CHHHHhcCCccccc
Q 011647 313 KERL---SAAEVLNHPWMRVD 330 (480)
Q Consensus 313 ~~R~---t~~~~l~h~~~~~~ 330 (480)
.+|| ++.++|+||||+..
T Consensus 233 ~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 233 TRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHcCCCCCHHHHHcCCCcCCC
Confidence 9997 58999999999853
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-50 Score=378.63 Aligned_cols=274 Identities=28% Similarity=0.467 Sum_probs=233.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|...+.||+|+||.||+|.+..+++.||+|++.... ....++.+.+|+.+|.+++ ++||.++|+.|..+..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHH
Confidence 45888899999999999999999999999999997654 3456788999999999999 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||||.||++.+.+...+.+++..+..++++++.||.|||..+.+|||||+.|||+. ..+.+||+|||.+........
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeechhh
Confidence 99999999999998888889999999999999999999999999999999999995 457899999999988765543
Q ss_pred c-ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 227 F-KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 227 ~-~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
. .+++|||.|||||++.+ .|+.++||||||++.+||++|.+||....+...+..|-+..++... ..+++.+++||
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~---~~~S~~~kEFV 243 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLD---GDFSPPFKEFV 243 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccc---cccCHHHHHHH
Confidence 3 67899999999999986 6999999999999999999999999888775544444443332222 26789999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhh
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (480)
..||.+||+.||+|.++|+|+|++... . .......+.+.++++..
T Consensus 244 ~~CL~k~P~~RpsA~~LLKh~FIk~a~--k-~s~L~~~i~r~~~~~~~ 288 (467)
T KOG0201|consen 244 EACLDKNPEFRPSAKELLKHKFIKRAK--K-TSELKELIDRYKRWRVK 288 (467)
T ss_pred HHHhhcCcccCcCHHHHhhhHHHHhcC--C-chHHHHHHHHHHHHhhc
Confidence 999999999999999999999999732 1 12223445555555554
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=389.22 Aligned_cols=257 Identities=32% Similarity=0.581 Sum_probs=221.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++++. ||||+++++.+.+++.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEE
Confidence 5889999999999999999999999999999997654444455678899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC---
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--- 224 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~--- 224 (480)
|||++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 45778999999997532100
Q ss_pred ---------------------------------------------CccccCCCCccccccccccc-cCCCchhHHHHHHH
Q 011647 225 ---------------------------------------------DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVI 258 (480)
Q Consensus 225 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 258 (480)
......+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00123479999999998864 58999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHhcCCcccc
Q 011647 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRV 329 (480)
Q Consensus 259 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~h~~~~~ 329 (480)
+|+|++|..||.+.+..+....+.........+....+++++.++|.+|+ .+|.+|++ +.++++||||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence 99999999999988877776666655444444445678999999999987 59999997 999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-48 Score=389.22 Aligned_cols=257 Identities=28% Similarity=0.533 Sum_probs=219.5
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||+||+|.+..+++.||||++.+.........+.+.+|+++++++. ||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEEE
Confidence 6899999999999999999999999999999987654444455677899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC--
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-- 225 (480)
||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeeccccccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 456789999999986321100
Q ss_pred ----------------------------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHH
Q 011647 226 ----------------------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVI 258 (480)
Q Consensus 226 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 258 (480)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0012469999999998864 58999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCC---CCHHHHhcCCcccc
Q 011647 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER---LSAAEVLNHPWMRV 329 (480)
Q Consensus 259 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R---~t~~~~l~h~~~~~ 329 (480)
+|+|++|..||.+......+..+.........+....++.++.+||.+||. +|.+| +++.++++||||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 999999999999888777777766543333333334688999999999997 77775 59999999999974
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-48 Score=380.09 Aligned_cols=249 Identities=31% Similarity=0.579 Sum_probs=219.4
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444555677889999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccccccccc
Confidence 9999999888889999999999999999999999999999999999999 4567799999999875322 22234467
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++ ..+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLLIK 232 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHcCC
Confidence 9999999999864 589999999999999999999999998888777777766555443 36899999999999999
Q ss_pred CcCCCC-----CHHHHhcCCcccc
Q 011647 311 DPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~-----t~~~~l~h~~~~~ 329 (480)
||++|+ ++.++++||||..
T Consensus 233 dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 999997 8999999999974
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-48 Score=378.51 Aligned_cols=250 Identities=29% Similarity=0.554 Sum_probs=220.0
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+.++..+..||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987654434455677888999998876799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~ 231 (480)
++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... .........
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 456779999999987642 222334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++ ..++.++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~ 233 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTK 233 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccc
Confidence 9999999999865 488999999999999999999999999988888888877665443 25789999999999999
Q ss_pred CcCCCCCH------HHHhcCCcccc
Q 011647 311 DPKERLSA------AEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~t~------~~~l~h~~~~~ 329 (480)
||.+||++ +++++||||+.
T Consensus 234 dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 234 NPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred CHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 99999998 99999999974
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=378.82 Aligned_cols=250 Identities=32% Similarity=0.591 Sum_probs=219.9
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||.||++.+..+|+.||+|++.............+.+|+.+++++. ||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455667889999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 4567799999999875322 22334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++ ..+++++.++|.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999864 589999999999999999999999998888877777776655443 36789999999999999
Q ss_pred CcCCCC-----CHHHHhcCCccccc
Q 011647 311 DPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 311 dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
||++|+ ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999998 99999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-48 Score=389.27 Aligned_cols=257 Identities=30% Similarity=0.550 Sum_probs=221.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|++.+.||+|+||+||+|++..+++.||||++.+...........+.+|+.+++++. ||||+++++.+.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEEE
Confidence 6999999999999999999999999999999987654434445577889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC---
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--- 224 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~--- 224 (480)
|||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccccccccc
Confidence 999999999999988889999999999999999999999999999999999999 45678999999997532100
Q ss_pred -----------------------------------------CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHH
Q 011647 225 -----------------------------------------DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYIL 262 (480)
Q Consensus 225 -----------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l 262 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 00113479999999999865 589999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHhcCCcccc
Q 011647 263 LSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRV 329 (480)
Q Consensus 263 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~h~~~~~ 329 (480)
++|..||.+....+....+.........+....+++++.++|.+|+ .+|.+|+ ++.++++||||+.
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 9999999988877766666654444444444578999999999977 5999999 9999999999985
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-48 Score=376.75 Aligned_cols=255 Identities=28% Similarity=0.542 Sum_probs=223.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|+||.||+|.+..+++.||||++.+.........+.+..|+.++..+..|++|+++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48899999999999999999999999999999976544444556778899999999985667999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDV 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~ 226 (480)
||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCc
Confidence 999999999999888889999999999999999999999999999999999999 456779999999987532 2223
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+......++ ..+++++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~ 233 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 345679999999999865 488999999999999999999999999888888888877665443 357899999999
Q ss_pred HhcccCcCCCCCH-----HHHhcCCcccc
Q 011647 306 KMLHADPKERLSA-----AEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~t~-----~~~l~h~~~~~ 329 (480)
+||.+||.+|++. +++++||||+.
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 234 GLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999986 89999999975
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-48 Score=357.27 Aligned_cols=261 Identities=30% Similarity=0.477 Sum_probs=220.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC-eeEEEEEEEeCC----
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-IVELKGAYEDRH---- 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~-iv~~~~~~~~~~---- 141 (480)
..|..+++||+|+||+||+|+.+.+|+.||+|.+...... +..-....+|+.+++.|+ |+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence 4588888999999999999999999999999999754321 112245689999999999 999 999999998877
Q ss_pred --eEEEEEecCCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 142 --SVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 142 --~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
.+++|+||+. .+|..++.... .++...++.+++||+.||+|||++||+||||||+||||+ ..+.+||+||
T Consensus 89 ~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeecc
Confidence 8999999994 59999988755 588899999999999999999999999999999999995 5788999999
Q ss_pred ccceecC-CCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 216 GLSVFFK-PGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 216 g~a~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
|+|+... +....+..++|.+|+|||++-+ .|+...||||+|||++||+++++.|.+..+.+.+..|.+-.-......
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9999766 4455777899999999998865 499999999999999999999999999999887777754222222222
Q ss_pred C--------------------------CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 293 W--------------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 293 ~--------------------------~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
| +..+++..+++.+||+.+|.+|.|+..+|.||||......
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 2 2234588999999999999999999999999999866443
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=370.92 Aligned_cols=259 Identities=36% Similarity=0.627 Sum_probs=237.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.+-|.+.+.||+|-|++|-+|++.-+|..||||++.+.++... ....+..|++.|+-+. |||||++|++......+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTKl 92 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTKL 92 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhc-CcCeeeeeehhcccceE
Confidence 456779999999999999999999999999999999998776433 3456889999998888 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|+|+|+-.+|+|+++|.+. ..+.+..+.+++.||+.|+.|||...+|||||||+||++. ..-|.|||.|||++..+.
T Consensus 93 yLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccCC
Confidence 9999999999999999765 4599999999999999999999999999999999999885 567889999999999999
Q ss_pred CCCccccCCCCcccccccccccc-C-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
++....+.||+..|.|||++.|. | .+++||||||||||.|.+|++||...++.+.+..|+...+..|. .++.++
T Consensus 171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~eC 246 (864)
T KOG4717|consen 171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSKEC 246 (864)
T ss_pred CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhHHH
Confidence 99999999999999999998764 4 57899999999999999999999999999999999998887765 689999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
++||..||..||.+|.+.++|..|+|++--
T Consensus 247 rdLI~sMLvRdPkkRAslEeI~s~~Wlq~~ 276 (864)
T KOG4717|consen 247 RDLIQSMLVRDPKKRASLEEIVSTSWLQAG 276 (864)
T ss_pred HHHHHHHHhcCchhhccHHHHhccccccCC
Confidence 999999999999999999999999999843
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-48 Score=384.63 Aligned_cols=258 Identities=34% Similarity=0.631 Sum_probs=225.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.+..+++.||||++.............+.+|+.++..+. ||||+++++++.+++.+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEE
Confidence 36999999999999999999999999999999997654444455677899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccCc
Confidence 9999999999999888899999999999999999999999999999999999999 456789999999998654332
Q ss_pred -----------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 011647 226 -----------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (480)
Q Consensus 226 -----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 275 (480)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 2234579999999999865 5899999999999999999999999988887
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCC-HHHHhcCCcccc
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS-AAEVLNHPWMRV 329 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-~~~~l~h~~~~~ 329 (480)
.....+.........+....+++++.+||.+||. ||.+|++ +.++++||||+.
T Consensus 237 ~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 237 ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 7777776633333333334589999999999997 9999999 999999999974
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=368.71 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=211.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||.|+||+||+|.+..+++.||+|++..... ......+.+|+.+++++. ||||+++++++..++..++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEE
Confidence 469999999999999999999999999999999864322 222356789999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+.+ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCC
Confidence 999975 8988887654 48999999999999999999999999999999999999 45677999999999765322
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc---------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------------- 287 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~--------------- 287 (480)
.......|++.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+..+.+..+......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 22344578999999998754 4789999999999999999999999887766555544321110
Q ss_pred ----CCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 ----FSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 ----~~~-------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++. ...+.+++++.+||.+||+.||.+|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 000 0123568899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-48 Score=375.86 Aligned_cols=250 Identities=27% Similarity=0.536 Sum_probs=220.4
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|++..+++.||||++.+.........+.+..|.+++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999997654444455677888999998876799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence 9999999888899999999999999999999999999999999999999 4567899999999876432 22334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++. .+++++.++|.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV----WLSKEAVSILKAFMTK 233 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhcc
Confidence 9999999998865 5899999999999999999999999999988888888876654432 4789999999999999
Q ss_pred CcCCCC-------CHHHHhcCCcccc
Q 011647 311 DPKERL-------SAAEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~-------t~~~~l~h~~~~~ 329 (480)
||++|+ +++++++||||..
T Consensus 234 dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 999999 9999999999964
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-48 Score=371.63 Aligned_cols=248 Identities=27% Similarity=0.433 Sum_probs=211.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-eEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-SVNLI 146 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-~~~lv 146 (480)
...+.+.||+|+||+||+|.+..+ ..||||++......... .+.+.+|+.+|.+++ |||||++++++.+.. .++||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 345566799999999999999753 22999999765543333 779999999999998 999999999998887 79999
Q ss_pred EecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CeecCCCCcceecccCCCCC-CeeEeecccceecC
Q 011647 147 MDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMG-VMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFK 222 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~-~ikl~Dfg~a~~~~ 222 (480)
|||+++|+|.+++.. .+.++...+..++.||++|+.|||+++ ||||||||+|||++ .+. ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCCccceeec
Confidence 999999999999987 678999999999999999999999999 99999999999994 454 89999999998765
Q ss_pred CC-CccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PG-DVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.. ...+...||+.|||||++++ .++.++||||||+++|||+||..||.+.........+.........+ ...++
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~~~ 273 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KECPP 273 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--ccCCH
Confidence 43 33344789999999999984 39999999999999999999999999988866666665444333222 23889
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+..++.+||..||.+||+..+++.
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9999999999999999999999874
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-48 Score=382.14 Aligned_cols=261 Identities=31% Similarity=0.520 Sum_probs=224.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEE
Confidence 3467999999999999999999999999999999997544434444566889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999999999987754 468999999999999999999999999999999999999 55778999999999875433
Q ss_pred C--ccccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 D--VFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.........+....+|
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEIS 275 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCC
Confidence 2 2234679999999998753 37889999999999999999999999988887888877655444434445689
Q ss_pred HHHHHHHHHhcccCcCC--CCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~~ 330 (480)
.++.+||.+||..+|.+ |+|+.++++||||+..
T Consensus 276 ~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 276 KQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 99999999999999988 9999999999999853
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=374.58 Aligned_cols=255 Identities=28% Similarity=0.524 Sum_probs=224.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|+||+||+|.+..+++.||+|++.+.........+.+..|..++..+..||+|+++++++...+.+++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 48889999999999999999999999999999976544444455667888888888877999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDV 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~ 226 (480)
||+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCc
Confidence 999999999999888899999999999999999999999999999999999999 4567899999999976432 223
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++. .++.++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~ 233 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICK 233 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----cCCHHHHHHHH
Confidence 345679999999998864 5899999999999999999999999998888888888776655443 57899999999
Q ss_pred HhcccCcCCCCCH-----HHHhcCCcccc
Q 011647 306 KMLHADPKERLSA-----AEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~t~-----~~~l~h~~~~~ 329 (480)
+||+.||.+|++. .++++||||+.
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 234 GLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred HHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999984 89999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=375.20 Aligned_cols=250 Identities=28% Similarity=0.561 Sum_probs=213.2
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+++++++.+.+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455677889999999997799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec-CCCCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~-~~~~~~~~~~ 231 (480)
++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++... .........+
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 45677999999998753 2233344568
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---------EQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... .......+......++ ..++.++.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 233 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence 9999999999865 58899999999999999999999995321 1223344444444333 35789999
Q ss_pred HHHHHhcccCcCCCCC------HHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLS------AAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t------~~~~l~h~~~~~ 329 (480)
++|.+||..||.+|+| ++++++||||+.
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999987 789999999964
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-48 Score=377.62 Aligned_cols=249 Identities=32% Similarity=0.594 Sum_probs=219.0
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||+|++.+...........+.+|++++..+. ||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455677888999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCccccC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDL 230 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~ 230 (480)
++|..++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||++.... ........
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCcccccc
Confidence 9999999888889999999999999999999997 799999999999999 456789999999987543 22233456
Q ss_pred CCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++++.++|.+||.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~ 232 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLSGLLK 232 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999999864 589999999999999999999999998888777777766655544 3578999999999999
Q ss_pred cCcCCCC-----CHHHHhcCCcccc
Q 011647 310 ADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 310 ~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
.||++|+ ++.++++||||..
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 9999997 9999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-48 Score=338.65 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=223.1
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
..++..||+|+.|+||+++.+.+|...|||.+.+. .+.++.+++...+.++....++|+||+.+++|..+..++|.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 45667899999999999999999999999998654 3667778899999988888789999999999999999999999
Q ss_pred cCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 149 LCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 149 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
.|. ..+..++.. .++++|..+-++..-++.||.||.+ +||+|||+||+|||+ ++.|+|||||||++-.+-.+..
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecccc
Confidence 983 345454443 5679999999999999999999986 589999999999999 6788899999999998877777
Q ss_pred cccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 227 FKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.+...|.+.|||||.+. ..|+-++||||||++++||.||..||.+ ..+.+.+..+++..+ ...+.-..+|++++
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQ 326 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHH
Confidence 78889999999999885 3488899999999999999999999987 456788888887544 33333445999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
+|+..||++|+.+||...++|+|||.+.+...
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a 358 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEHPFIKRYETA 358 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcCcceeecchh
Confidence 99999999999999999999999999977543
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=380.72 Aligned_cols=261 Identities=30% Similarity=0.505 Sum_probs=222.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++.++..+|
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEE
Confidence 3468999999999999999999999999999999987544434444566889999999988 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccC
Confidence 99999999999998864 468999999999999999999999999999999999999 45678999999999876432
Q ss_pred Cc--cccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 DV--FKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~~--~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......+..+....++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 275 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEIS 275 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCC
Confidence 22 235679999999998853 27889999999999999999999999988877777777654433333334679
Q ss_pred HHHHHHHHHhcccCcCC--CCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~~ 330 (480)
..+++++.+||..++.+ |+|+.++++||||+..
T Consensus 276 ~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 276 KHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 99999999999865544 8999999999999853
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=372.10 Aligned_cols=250 Identities=28% Similarity=0.526 Sum_probs=216.2
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||.||+|.++.++..||+|++...........+....|..++..+.+||||+++++++.+.+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999999999999999997644333344566788888888775699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
++|..++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..... .......+
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999999888889999999999999999999999999999999999999 4567799999999875322 22334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++.+++++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLFER 233 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999865 589999999999999999999999998888887777766544333 24789999999999999
Q ss_pred CcCCCCCH-HHHhcCCcccc
Q 011647 311 DPKERLSA-AEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~t~-~~~l~h~~~~~ 329 (480)
||++|+++ +++++||||+.
T Consensus 234 dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 234 DPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred CHHHcCCChHHHHcCCCcCC
Confidence 99999998 58889999975
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=371.81 Aligned_cols=250 Identities=32% Similarity=0.572 Sum_probs=216.1
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||+|++...........+.+..|..++..+.+||||+++++++..++.+++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654434445566677888887766699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-CccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~~~~~~~ 231 (480)
++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... ......+
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 45677999999999864322 2334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++ ..++.++.++|.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER 233 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999865 488999999999999999999999999888888777766544333 35789999999999999
Q ss_pred CcCCCCCHH-HHhcCCcccc
Q 011647 311 DPKERLSAA-EVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~t~~-~~l~h~~~~~ 329 (480)
||.+||++. ++++||||+.
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 234 DPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred CHHHcCCChHHHHcCcccCC
Confidence 999999864 8889999974
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-49 Score=372.95 Aligned_cols=261 Identities=33% Similarity=0.620 Sum_probs=236.4
Q ss_pred cccceee--cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 65 VRNTYIF--GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 65 ~~~~y~~--~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+..-|.+ .+.||+|.||+||-|.++.+|+.||||++.+..+... ....+++|+.||+++. ||.||.+...|+..+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~-HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLH-HPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcC-CCCeeEEEEeecCCce
Confidence 3445655 3689999999999999999999999999998776544 3488999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++|||.+.| ++.+.+. ..+++++...+.++.||+.||.|||-+||+|+||||+|||+.+.+.-.++||||||+|+.
T Consensus 638 vFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 638 VFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred EEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 9999999955 6666664 368899999999999999999999999999999999999999887778999999999999
Q ss_pred cCCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
+.+.....+.+|||.|+|||+++ .+|+..-|+||.|||+|--++|..||. .++++-+.|.+..+-+|..+|..++++
T Consensus 717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFN--EdEdIndQIQNAaFMyPp~PW~eis~~ 794 (888)
T KOG4236|consen 717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFN--EDEDINDQIQNAAFMYPPNPWSEISPE 794 (888)
T ss_pred cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCC--CccchhHHhhccccccCCCchhhcCHH
Confidence 98777777889999999999996 569999999999999999999999994 456677889999999999999999999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.+||..+|+..-++|.|+.+.|.|||++.+
T Consensus 795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 9999999999999999999999999999854
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=372.12 Aligned_cols=251 Identities=29% Similarity=0.565 Sum_probs=220.2
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||||++.+...........+.+|+.++..+.+||||+++++++...+.+++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654444455677889999998886799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
++|...+...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... .......+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence 9999999888899999999999999999999999999999999999999 4567799999999875322 22233457
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++.++.+||.+||..
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK 233 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence 9999999999865 588999999999999999999999998888888777776655443 35789999999999999
Q ss_pred CcCCCCCH-----HHHhcCCccccc
Q 011647 311 DPKERLSA-----AEVLNHPWMRVD 330 (480)
Q Consensus 311 dp~~R~t~-----~~~l~h~~~~~~ 330 (480)
||.+|||+ .++++||||+..
T Consensus 234 dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999999 999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-48 Score=381.10 Aligned_cols=257 Identities=30% Similarity=0.547 Sum_probs=221.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|+||+||+|.++.+++.||+|++.............+.+|+.++..+. ||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEE
Confidence 5889999999999999999999999999999997654444455678899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC--
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-- 225 (480)
|||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccccc
Confidence 999999999999888899999999999999999999999999999999999999 456789999999987542110
Q ss_pred ----------------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCC
Q 011647 226 ----------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFW 270 (480)
Q Consensus 226 ----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~ 270 (480)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 0123579999999999864 58999999999999999999999999
Q ss_pred CCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHhcCCcccc
Q 011647 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRV 329 (480)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~h~~~~~ 329 (480)
+.........+.........++...+++++++||.+|+. ||.+|+ ++.++++||||+.
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence 988887777776543333222333578999999999874 999998 5899999999985
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=366.80 Aligned_cols=256 Identities=30% Similarity=0.489 Sum_probs=211.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++..++.+++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEE
Confidence 369999999999999999999999999999999875432 2334567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||++++.+..+......+++..++.++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCccccccccc
Confidence 9999987776555555679999999999999999999999999999999999999 456779999999998764322
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc----------------
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID---------------- 287 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~---------------- 287 (480)
......|++.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+.....+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 2234578999999998864 5889999999999999999999999887654443332221100
Q ss_pred ---CCC---------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 ---FSS---------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 ---~~~---------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++. .....+|.++.+||.+||++||++|||++++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000 0012368889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-48 Score=376.87 Aligned_cols=258 Identities=30% Similarity=0.493 Sum_probs=222.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.++.+++.||+|++...........+.+.+|+.+++.+. ||||+++++++.+.+.+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEE
Confidence 36899999999999999999999999999999997654434445677889999999887 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCC
Confidence 9999999999999876 679999999999999999999999999999999999999 456789999999998765433
Q ss_pred c--cccCCCCcccccccccc-------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 226 V--FKDLVGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
. .....||+.|+|||++. ..++.++|||||||++|+|++|..||........+..+.........+..+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV 236 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC
Confidence 2 22347999999999875 24678999999999999999999999988877777777654432222333468
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
++++.+||.+||+ +|.+|||++++++||||+.
T Consensus 237 ~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 237 SSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred CHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 9999999999998 9999999999999999975
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-47 Score=371.38 Aligned_cols=252 Identities=31% Similarity=0.547 Sum_probs=217.3
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHH---HccCCCCeeEEEEEEEeCCeEEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH---HLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~---~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|+.++. ++. ||||+++++++...+.+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~-hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER-HPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC-CCChhceeeEEEcCCEEEE
Confidence 678899999999999999999999999999997654434445567777777654 445 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-C
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-G 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~ 224 (480)
||||++|++|...+. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... .
T Consensus 80 v~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 999999999987765 4579999999999999999999999999999999999999 4567899999999875432 2
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......+|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++ ..+++++.++
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 231 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISI 231 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 23345679999999998865 588999999999999999999999999888888888777665443 3578999999
Q ss_pred HHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 304 VKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
|.+||+.||.+|| ++.++++||||+.
T Consensus 232 i~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 232 MRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 9999999999999 7999999999974
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-48 Score=355.32 Aligned_cols=258 Identities=31% Similarity=0.501 Sum_probs=217.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
..-.|.-.+.+|.|+||.||+|....++..||||.+-.... .-.+|+++|+.+. |||||++.-+|...
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~-HpNIV~L~~~f~~~~~~d 93 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLD-HPNIVRLLYFFSSSTESD 93 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcC-CcCeeeEEEEEEecCCCc
Confidence 33458888999999999999999999999999998865432 2247999999888 99999999887532
Q ss_pred -CeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 141 -HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
-+..+||||++. +|.+.+.. +.+++...++-+++||++||.|||+.||+||||||+|+|++ .+.+.+|||||
T Consensus 94 ~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDF 170 (364)
T KOG0658|consen 94 EVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDF 170 (364)
T ss_pred hhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccC
Confidence 245689999965 99888874 56799999999999999999999999999999999999996 45789999999
Q ss_pred ccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC--------
Q 011647 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------- 285 (480)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~-------- 285 (480)
|.|+.+..+....+...|..|+|||.+-| .|+.+.||||.||++.||+-|++.|.|.+..+++..|.+..
T Consensus 171 GSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 171 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred CcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99999988887788889999999998754 59999999999999999999999999988877766653211
Q ss_pred ----C--------cCCCCC-----CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 286 ----I--------DFSSDP-----WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 286 ----~--------~~~~~~-----~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
. .+...+ ....++++.+|+.++|+.+|.+|.++.++|.||||..-..+
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 1 111111 24578999999999999999999999999999999765444
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-47 Score=371.71 Aligned_cols=250 Identities=29% Similarity=0.563 Sum_probs=212.8
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998655444455677889999998886799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~ 231 (480)
++|..++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... .........
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 456779999999987532 223334568
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE---------TEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||... ........+......++ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~ 233 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence 9999999999865 4889999999999999999999999521 12223444445444433 35789999
Q ss_pred HHHHHhcccCcCCCCC------HHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLS------AAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t------~~~~l~h~~~~~ 329 (480)
++|.+||..||.+||+ +.++++||||+.
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999998 589999999974
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-47 Score=369.74 Aligned_cols=255 Identities=27% Similarity=0.530 Sum_probs=222.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.++..+.+|++|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 37788999999999999999999999999999976544344455678889999998886788999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-Cc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DV 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~~ 226 (480)
||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... ..
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCcc
Confidence 999999999999888899999999999999999999999999999999999999 45677999999998754322 22
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++.++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 233 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHH
Confidence 334579999999998864 588999999999999999999999999888888888877665443 357899999999
Q ss_pred HhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 306 KMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+||+.+|.+|++ ..++++||||+.
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 234 GLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred HHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 999999999997 579999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-47 Score=368.20 Aligned_cols=251 Identities=29% Similarity=0.506 Sum_probs=216.1
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||||++...........+....|..++..+.+||||+++++++.+.+.+++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999997654333344566778888888765699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ........
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCCCceeeec
Confidence 99999998888899999999999999999999999999999999999994 567799999999875422 22334567
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..++.++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR 233 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence 9999999999865 589999999999999999999999998888777777765544332 24789999999999999
Q ss_pred CcCCCCCHH-HHhcCCccccc
Q 011647 311 DPKERLSAA-EVLNHPWMRVD 330 (480)
Q Consensus 311 dp~~R~t~~-~~l~h~~~~~~ 330 (480)
||++||++. ++++||||+..
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 234 EPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CHhhcCCChHHHHcCcccCCC
Confidence 999999996 89999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-47 Score=365.18 Aligned_cols=258 Identities=26% Similarity=0.427 Sum_probs=207.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|.++.+++.||||++..... ......+.+|+.+++.+. ||||+++++++.++...++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEE
Confidence 3679999999999999999999999999999999865432 122346778999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~- 223 (480)
||||+. ++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVP 156 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCC
Confidence 999995 5777777654 569999999999999999999999999999999999999 4567799999999875432
Q ss_pred CCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCc-------------
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHID------------- 287 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~------------- 287 (480)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..+ ...+..+......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 222344678999999998754 478899999999999999999999987543 2222222110000
Q ss_pred -CCCCC------------C--CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 288 -FSSDP------------W--PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 288 -~~~~~------------~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.... + ..+++++.+||.+||+.||++|||+.++|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00000 0 1245789999999999999999999999999999743
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-46 Score=383.69 Aligned_cols=260 Identities=23% Similarity=0.363 Sum_probs=205.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc-----CCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~hp~iv~~~~~~~~ 139 (480)
..++|++.+.||+|+||+||+|.+..+++.||||++.... ........|+.+++.+. +|++++++++++..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 4578999999999999999999999999999999985421 12244567777777765 24568899998875
Q ss_pred C-CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCC-----------
Q 011647 140 R-HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAE----------- 206 (480)
Q Consensus 140 ~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~----------- 206 (480)
+ .++|+|||++ |++|.+++.+.+.+++..+..++.||+.||.|||+ .|||||||||+|||++..+.
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 4 5789999998 77999999888899999999999999999999998 59999999999999964321
Q ss_pred --CCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc
Q 011647 207 --DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR 283 (480)
Q Consensus 207 --~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~ 283 (480)
...+||+|||.+.... ......+||+.|+|||++.+ .++.++|||||||++|||++|++||.+....+.+..+..
T Consensus 282 ~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~ 359 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK 359 (467)
T ss_pred CCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 2359999999876432 23345689999999999865 589999999999999999999999988776554443322
Q ss_pred CCCcCCCC------------------------------------CCC--CCCHHHHHHHHHhcccCcCCCCCHHHHhcCC
Q 011647 284 GHIDFSSD------------------------------------PWP--NISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (480)
Q Consensus 284 ~~~~~~~~------------------------------------~~~--~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~ 325 (480)
....++.. .+. ..++.+.+||.+||++||.+|||++|+|+||
T Consensus 360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp 439 (467)
T PTZ00284 360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHP 439 (467)
T ss_pred HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCc
Confidence 11110000 000 0135678999999999999999999999999
Q ss_pred cccccC
Q 011647 326 WMRVDG 331 (480)
Q Consensus 326 ~~~~~~ 331 (480)
||....
T Consensus 440 ~~~~~~ 445 (467)
T PTZ00284 440 YVLKYY 445 (467)
T ss_pred cccccC
Confidence 998643
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=349.57 Aligned_cols=256 Identities=32% Similarity=0.592 Sum_probs=239.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|.+.+.||+|.||+|-+++.+.+++.||+|++++.-....+++..-..|-++|+..+ ||.+..+-..|+..+++|+|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEEE
Confidence 67999999999999999999999999999999999988888888888899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee-cCCCC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~-~~~~~ 225 (480)
|||..||.|+-.|.+.+.+++..++.+...|+.||.|||+++||.||||.+|+|+ +.+++|||+|||+++. +..+.
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 7789999999999985 34556
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
...++||||.|+|||++.. .|+.++|.|.+||++|||++|+.||+..+...++..|+...+.||. .++++++.|+
T Consensus 324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAktLL 399 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAKTLL 399 (516)
T ss_pred eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHHHHH
Confidence 6788999999999999975 5999999999999999999999999999999999999999988876 6899999999
Q ss_pred HHhcccCcCCCC-----CHHHHhcCCccccc
Q 011647 305 KKMLHADPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 305 ~~~L~~dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
..+|.+||.+|. .+.++.+|+||..-
T Consensus 400 sGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 400 SGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 999999999998 68899999999753
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=373.44 Aligned_cols=255 Identities=30% Similarity=0.562 Sum_probs=214.1
Q ss_pred ceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccC-ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
+|.+.+.||+|+||+||++++. .+++.||+|++.+.... .....+.+.+|+.++.++.+||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999999874 47899999998754322 2233467889999999997799999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCccccc
Confidence 99999999999999998888899999999999999999999999999999999999994 567799999999986533
Q ss_pred CC--ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcCCCcCCCCCCCC
Q 011647 224 GD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.... .......+......+ ...
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~ 233 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF----PSF 233 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC----CCC
Confidence 22 2234679999999999865 37889999999999999999999996432 233334444433322 246
Q ss_pred CCHHHHHHHHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 296 ISSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+++.+.++|.+||..||++|| +++++++||||+.
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 889999999999999999999 8889999999975
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-47 Score=375.55 Aligned_cols=261 Identities=30% Similarity=0.495 Sum_probs=222.3
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.+++.+. ||||+++++++.++..++
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEE
Confidence 3478999999999999999999999999999999987544434444566788999999987 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+|++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCcC
Confidence 99999999999988764 468999999999999999999999999999999999999 45678999999999876432
Q ss_pred C--ccccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 D--VFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+.........+....++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 275 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCC
Confidence 2 2235679999999998853 27889999999999999999999999988888888887655444333445789
Q ss_pred HHHHHHHHHhcccCcCC--CCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~~ 330 (480)
..++++|.+||..++.+ |++++++++||||+..
T Consensus 276 ~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 276 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 99999999999844443 7899999999999753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-47 Score=370.53 Aligned_cols=259 Identities=29% Similarity=0.466 Sum_probs=210.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC-----Ce
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-----HS 142 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~-----~~ 142 (480)
+|.+.+.||+|+||.||+|.+..++..||||.+.... ........+.+|+.++++++ ||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCce
Confidence 5899999999999999999999999999999986432 12233456889999999998 99999999987543 35
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|+||||| +++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 89999999 46899999888889999999999999999999999999999999999999 457789999999997643
Q ss_pred CCC----ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc------------
Q 011647 223 PGD----VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------------ 283 (480)
Q Consensus 223 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~------------ 283 (480)
... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.........+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 221 1234579999999998753 588999999999999999999999987654332221110
Q ss_pred ---------------CCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 284 ---------------GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 284 ---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.........++.+++++.++|.+||..||++|||++++|+||||+....
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000111123567889999999999999999999999999999976444
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-47 Score=361.72 Aligned_cols=258 Identities=29% Similarity=0.497 Sum_probs=216.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++++. ||||+++++.+..++.+++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEE
Confidence 4888999999999999999999999999999987544333333456778999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ ++++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCC
Confidence 999999998887653 459999999999999999999999999999999999999 456789999999998765444
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.........+..............++..+.+||
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC 236 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHH
Confidence 4445689999999998864 588899999999999999999999987665433333322211122222346889999999
Q ss_pred HHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
.+||..||.+|| ++.++++||||..
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred HHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 999999999999 9999999999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-47 Score=368.50 Aligned_cols=250 Identities=34% Similarity=0.623 Sum_probs=216.7
Q ss_pred ceecccCCeEEEEEEEc---CCCceEEEEEecccccC-ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 73 RELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
+.||+|+||.||++++. .+++.||+|++...... .......+.+|+.+++.+. ||||+++++++..++.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 68999999999999874 46889999998754321 2233456789999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCcc
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVF 227 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~ 227 (480)
|+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence 99999999999988889999999999999999999999999999999999999 4567899999999875432 2223
Q ss_pred ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++ +.+++++.++|.+
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~ 233 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLKK 233 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHH
Confidence 44679999999999865 478899999999999999999999999888888888877665443 3578999999999
Q ss_pred hcccCcCCCC-----CHHHHhcCCccccc
Q 011647 307 MLHADPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 307 ~L~~dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
||+.||++|| +++++++||||+..
T Consensus 234 ~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 234 LLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999 89999999999753
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-47 Score=369.40 Aligned_cols=249 Identities=29% Similarity=0.583 Sum_probs=213.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHH-HHHHccCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
+.||+|+||+||+|.+..+++.||+|++.+...........+.+|.. +++.+. ||||+++++.+...+.+++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 46999999999999999999999999997654333333455556655 456676 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccC
Q 011647 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL 230 (480)
Q Consensus 152 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~ 230 (480)
+++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCccccc
Confidence 99999999888899999999999999999999999999999999999999 4567899999999875322 2233456
Q ss_pred CCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+.......+ +.+++++.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (323)
T cd05575 157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQ 232 (323)
T ss_pred cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999998865 588999999999999999999999999888888887776654432 4679999999999999
Q ss_pred cCcCCCCCH----HHHhcCCcccc
Q 011647 310 ADPKERLSA----AEVLNHPWMRV 329 (480)
Q Consensus 310 ~dp~~R~t~----~~~l~h~~~~~ 329 (480)
.||.+||++ .++++||||+.
T Consensus 233 ~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred cCHHhCCCCCCCHHHHHcCCCcCC
Confidence 999999988 69999999974
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=367.49 Aligned_cols=250 Identities=28% Similarity=0.536 Sum_probs=213.3
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++.++.+||||+.+++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999998655444455677889999999997799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~~ 231 (480)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence 9999999888899999999999999999999999999999999999999 456779999999987532 233344568
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-------EQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.... .......+......++ ..++..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l 233 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV 233 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 9999999998864 58899999999999999999999996422 2233444444333332 3578999999
Q ss_pred HHHhcccCcCCCCC------HHHHhcCCcccc
Q 011647 304 VKKMLHADPKERLS------AAEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~t------~~~~l~h~~~~~ 329 (480)
|.+||..||.+|++ ++++++||||+.
T Consensus 234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 99999999999998 579999999975
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=359.77 Aligned_cols=251 Identities=28% Similarity=0.470 Sum_probs=207.3
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||+|+||+||++.+..+++.||+|.+...........+.+..|+.+++.+. ||||+++.+++..+..+++||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 799999999999999999999999987654434444567788999999997 9999999999999999999999999999
Q ss_pred hHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-cccc
Q 011647 155 LFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKD 229 (480)
Q Consensus 155 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~ 229 (480)
|...+.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.++|+|||++....... ....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence 9877643 3569999999999999999999999999999999999999 456779999999998764432 2234
Q ss_pred CCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhc
Q 011647 230 LVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308 (480)
Q Consensus 230 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 308 (480)
..||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+.......+....+.+++.+.+++.+||
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL 236 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence 579999999999864 5889999999999999999999999765432211122111111112222468999999999999
Q ss_pred ccCcCCCC-----CHHHHhcCCcccc
Q 011647 309 HADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 309 ~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+.||++|| +++++++||||+.
T Consensus 237 ~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 237 AKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred cCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 99999999 8899999999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=359.28 Aligned_cols=255 Identities=25% Similarity=0.403 Sum_probs=207.5
Q ss_pred ceeecceecccCCeEEEEEEEcC-CCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEE-----e
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYE-----D 139 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~-----~ 139 (480)
+|.+.+.||+|+||+||+|.+.. +++.||+|.+..... .......+.+|+.+++.+. .||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 69999999999999999999854 468899999865432 2222345667888777764 4999999999875 3
Q ss_pred CCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...+++||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccc
Confidence 456899999996 5898888653 458999999999999999999999999999999999999 4567799999999
Q ss_pred ceecCCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------ 290 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~------ 290 (480)
+.............||+.|+|||++. ..++.++|||||||++|+|++|.+||.+....+.+..+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 98765444445567999999999885 45889999999999999999999999988877666665432110000
Q ss_pred -----------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 291 -----------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 291 -----------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
...+.+++.+.+|+.+||+.||++|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0123578889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-46 Score=364.11 Aligned_cols=258 Identities=25% Similarity=0.369 Sum_probs=216.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||.||++++..++..||+|++.... .....+.+.+|+++++++. ||||+++++++..++.+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEE
Confidence 467999999999999999999999999999999986432 2334567999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+++++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccccccccc
Confidence 999999999999998888899999999999999999999986 699999999999994 5677999999998765432
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-----------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------------- 286 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~----------------- 286 (480)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+.....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2345679999999999865 488999999999999999999999976655443322211000
Q ss_pred ---------------------------cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 287 ---------------------------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 287 ---------------------------~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+..+...+++++++||.+||..||++|||+.++|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 00111112468899999999999999999999999999999854
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=365.74 Aligned_cols=259 Identities=27% Similarity=0.523 Sum_probs=217.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||++.+..+++.||+|++.+.........+.+.+|+.++..+. ||||+++++++.+++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEE
Confidence 36999999999999999999999999999999997544434445567889999999987 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||++|++|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence 999999999999876 4579999999999999999999999999999999999999 456779999999987654332
Q ss_pred c--cccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC-CCCCCC
Q 011647 226 V--FKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNI 296 (480)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 296 (480)
. ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+....+....+......+.. ...+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV 236 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence 2 12346999999999885 24678999999999999999999999988777776666554322221 123458
Q ss_pred CHHHHHHHHHhcccCcCC--CCCHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~ 329 (480)
+.+++++|.+||..++++ |+++.++++||||..
T Consensus 237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 237 SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 999999999998764444 789999999999964
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-47 Score=371.50 Aligned_cols=249 Identities=31% Similarity=0.560 Sum_probs=214.7
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
||+|+||+||+|++..+++.||||++.+..............|..++..+. +||||+++++++.....+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999987544333334455566777776654 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~~ 231 (480)
++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 9999999888899999999999999999999999999999999999999 4567799999999875432 22334567
Q ss_pred CCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 232 gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+..+...++. ..+++++.++|.+||.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~ 234 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLN 234 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcC
Confidence 9999999998854 4789999999999999999999999998888888887776655543 3578999999999999
Q ss_pred cCcCCCC----CHHHHhcCCcccc
Q 011647 310 ADPKERL----SAAEVLNHPWMRV 329 (480)
Q Consensus 310 ~dp~~R~----t~~~~l~h~~~~~ 329 (480)
.||.+|| ++.++++||||+.
T Consensus 235 ~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 235 RNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred CCHHHCCCCCCCHHHHhcCccccC
Confidence 9999998 7999999999974
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-47 Score=373.59 Aligned_cols=257 Identities=30% Similarity=0.470 Sum_probs=215.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCC-----CCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-----RNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-----p~iv~~~~~~~~ 139 (480)
+..+|.+.+.||+|+||.|.+|.+..|++.||||+++..+ ....+...|+.+|..|+.| -|+|+++++|..
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 4568999999999999999999999999999999997643 3456678899999999843 389999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+++|||+|++ +.+|+++++.++ .++...++.++.||+.||..||+.||||+||||+|||+..... ..|||+|||+
T Consensus 260 r~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r-~~vKVIDFGS 337 (586)
T KOG0667|consen 260 RNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR-SRIKVIDFGS 337 (586)
T ss_pred ccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc-CceeEEeccc
Confidence 99999999999 669999998764 5899999999999999999999999999999999999986443 4899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC----------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------- 286 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~---------- 286 (480)
|...... ....+.+..|+|||++-| .|+.+.||||||||++||++|.+.|.|.++.+.+..|..-..
T Consensus 338 Sc~~~q~--vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 338 SCFESQR--VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred ccccCCc--ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 9875432 237788999999998865 699999999999999999999999999988777766532000
Q ss_pred -----cCCC-C-------------------------------CCC------------CCCHHHHHHHHHhcccCcCCCCC
Q 011647 287 -----DFSS-D-------------------------------PWP------------NISSSAKDIVKKMLHADPKERLS 317 (480)
Q Consensus 287 -----~~~~-~-------------------------------~~~------------~~~~~~~~li~~~L~~dp~~R~t 317 (480)
-+.. . ..| .-...+.+||.+||.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 0000 0 001 11245789999999999999999
Q ss_pred HHHHhcCCcccc
Q 011647 318 AAEVLNHPWMRV 329 (480)
Q Consensus 318 ~~~~l~h~~~~~ 329 (480)
+.++|+||||..
T Consensus 496 p~qal~Hpfl~~ 507 (586)
T KOG0667|consen 496 PAQALNHPFLTG 507 (586)
T ss_pred HHHHhcCccccc
Confidence 999999999984
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-46 Score=379.35 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=207.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
...+|.+++.||+|+||+||+|.+..+++.||||.+.... ....+|+.+++.++ ||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcC-CCCCcceeeeEeeccccc
Confidence 3467999999999999999999999999999999885321 23457999999998 99999999876432
Q ss_pred ----CeEEEEEecCCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 141 ----HSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 141 ----~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
..+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++. .++.+||
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL 212 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKL 212 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceee
Confidence 247799999975 6766654 3467999999999999999999999999999999999999952 3456999
Q ss_pred eecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC-----
Q 011647 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----- 285 (480)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~----- 285 (480)
+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+....
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999987665555556789999999998754 58999999999999999999999998877655554443211
Q ss_pred ------------CcCCCCC--------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 286 ------------IDFSSDP--------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 286 ------------~~~~~~~--------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..++... ....++++.+||.+||.+||.+|||+.++|+||||...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 1111100 12367899999999999999999999999999999754
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-47 Score=365.44 Aligned_cols=256 Identities=32% Similarity=0.565 Sum_probs=230.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe-EEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS-VNL 145 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~-~~l 145 (480)
+.|.+++.+|+|+||.+++++++..+..|++|.+....... .......+|+.+++++. |||||.+.+.|.+++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 56999999999999999999999999999999998665533 33457889999999998 9999999999998888 999
Q ss_pred EEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||+||+||+|.+.+.+.+ .++++.+..|+.||+.|+.|||+++|+|||||+.||+++ .+..|||+|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcCC
Confidence 999999999999997654 599999999999999999999999999999999999995 455589999999999887
Q ss_pred CC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.. ...+.+|||.||+||++.+ .|+.++|||||||++|||++-+++|.+.+......+|.++...... ...+.+++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp---~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP---SMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC---ccccHHHH
Confidence 76 5667899999999999976 5999999999999999999999999999999999999888743222 46899999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+|..||..+|+.||++.++|.+|.+...
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 99999999999999999999999988743
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-46 Score=371.21 Aligned_cols=253 Identities=23% Similarity=0.367 Sum_probs=206.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
..+|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+++++++. ||||+++++++......++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEE
Confidence 4679999999999999999999999999999997531 35678999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||++. ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++......
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCccccccccc
Confidence 999994 68999988888899999999999999999999999999999999999994 5677999999998753221
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHcC-----------
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-------EQSIFDAILRG----------- 284 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~-------~~~~~~~~~~~----------- 284 (480)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+..+...
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 22334689999999999864 58999999999999999999998875432 11111111110
Q ss_pred ---------------CCc--CCCCCC---CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 285 ---------------HID--FSSDPW---PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 285 ---------------~~~--~~~~~~---~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
... ...+.| ..++.++.+||.+||+.||++|||+.|+|+||||+....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 000 000011 135678999999999999999999999999999986443
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=366.82 Aligned_cols=249 Identities=29% Similarity=0.566 Sum_probs=213.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHH-HHHccCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI-MHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
+.||+|+||+||+|.+..+|+.||+|++.+...........+.+|..+ ++.+. ||||+++++.+...+.+++||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence 469999999999999999999999999976544333444556666654 55566 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccC
Q 011647 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL 230 (480)
Q Consensus 152 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~ 230 (480)
|++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCcccc
Confidence 99999999888899999999999999999999999999999999999999 4567899999999875322 2233456
Q ss_pred CCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+....+.......+ +.++..+.++|.+||.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232 (325)
T ss_pred cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhc
Confidence 79999999999865 588999999999999999999999999888888777776544332 4688999999999999
Q ss_pred cCcCCCCCH----HHHhcCCcccc
Q 011647 310 ADPKERLSA----AEVLNHPWMRV 329 (480)
Q Consensus 310 ~dp~~R~t~----~~~l~h~~~~~ 329 (480)
.+|.+||++ .++++||||+.
T Consensus 233 ~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 233 KDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred cCHHhcCCCCCCHHHHhcCCCcCC
Confidence 999999977 59999999974
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-46 Score=364.27 Aligned_cols=249 Identities=29% Similarity=0.576 Sum_probs=211.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHH-HHHHccCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
+.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.+. ||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC
Confidence 46999999999999999999999999987543322233344445544 456676 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CCccccC
Q 011647 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL 230 (480)
Q Consensus 152 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~~~~~~ 230 (480)
|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCCCCcccc
Confidence 999999998888899999999999999999999999999999999999994 567799999999875422 2233456
Q ss_pred CCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......+ .+.+++.+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNITNSARHLLEGLLQ 232 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCCCHHHHHHHHHHcc
Confidence 79999999998865 48899999999999999999999999988888777776654332 24789999999999999
Q ss_pred cCcCCCCCHH----HHhcCCcccc
Q 011647 310 ADPKERLSAA----EVLNHPWMRV 329 (480)
Q Consensus 310 ~dp~~R~t~~----~~l~h~~~~~ 329 (480)
.||.+|+++. ++++|+||..
T Consensus 233 ~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 233 KDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred cCHHHCCCCCCCHHHHhcCcccCC
Confidence 9999999876 8999999964
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=365.58 Aligned_cols=248 Identities=31% Similarity=0.555 Sum_probs=215.6
Q ss_pred ceecccCCeEEEEEEE---cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEec
Q 011647 73 RELGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 149 (480)
+.||+|+||.||++++ ..+|+.||+|++..... .......+.+|+++++++. ||||+++++++.+++.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 6799999999999986 35789999999975432 2223456788999999998 99999999999999999999999
Q ss_pred CCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-Cccc
Q 011647 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFK 228 (480)
Q Consensus 150 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~~~~ 228 (480)
+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCCcee
Confidence 9999999999888889999999999999999999999999999999999999 45677999999998865433 2334
Q ss_pred cCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHh
Q 011647 229 DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307 (480)
Q Consensus 229 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 307 (480)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++ ..+++++.++|.+|
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~ 232 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRAL 232 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHH
Confidence 5679999999999865 578899999999999999999999998888888877776655443 35789999999999
Q ss_pred cccCcCCCCC-----HHHHhcCCcccc
Q 011647 308 LHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 308 L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
|+.||++||+ +.++++||||+.
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 9999999999 788999999985
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=354.99 Aligned_cols=255 Identities=29% Similarity=0.519 Sum_probs=213.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||+|+||+||+|.+..+++.||+|.+.............+.+|+.++++++ |++|+.+++.+.+.+.+++||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEE
Confidence 3778899999999999999999999999999987654433334456788999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCCc
Confidence 999999999888653 3589999999999999999999999999999999999994 56679999999998765444
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQS---IFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
......|++.|+|||++.+ .++.++||||+|+++|+|++|..||....... ........ ........+++++.
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 233 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQEEYSEKFSPDAR 233 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hhhhcCccCCHHHH
Confidence 4445689999999999864 58899999999999999999999998654321 12221111 11122346789999
Q ss_pred HHHHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+|+.+||+.||++||| +.++++||||+.
T Consensus 234 ~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred HHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 9999999999999999 999999999974
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=363.35 Aligned_cols=259 Identities=25% Similarity=0.498 Sum_probs=218.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+++++.+++.||+|++.+...........+.+|+.++..+. |+||+++++++.+.+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 36999999999999999999999999999999987543333344566888999998887 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||++||+|.+++.. .+.+++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccceeeccCCC
Confidence 999999999999977 46799999999999999999999999999999999999994 56779999999998764332
Q ss_pred cc--ccCCCCccccccccccc------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC-CCCCCC
Q 011647 226 VF--KDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNI 296 (480)
Q Consensus 226 ~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 296 (480)
.. ....||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+......++. ..+..+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV 236 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence 22 23579999999998853 4788999999999999999999999988877777777654433221 223467
Q ss_pred CHHHHHHHHHhcccCcCC--CCCHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~ 329 (480)
+.+++++|.+||..++.+ |++++++++||||+.
T Consensus 237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 237 SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred CHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 999999999999876654 569999999999974
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-46 Score=362.40 Aligned_cols=249 Identities=29% Similarity=0.563 Sum_probs=211.9
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHH-HHHHccCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
+.||+|+||+||+|++..+++.||+|++.+...........+.+|.. +++.+. ||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999999999999999987654333333455556655 566676 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCCccccC
Q 011647 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDL 230 (480)
Q Consensus 152 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~~~~~~ 230 (480)
|++|...+.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ........
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence 99999999888889999999999999999999999999999999999999 456779999999987532 22233456
Q ss_pred CCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++ +..+.++.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLH 232 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcc
Confidence 79999999999865 588999999999999999999999999888777777776554433 3578899999999999
Q ss_pred cCcCCCCCH----HHHhcCCcccc
Q 011647 310 ADPKERLSA----AEVLNHPWMRV 329 (480)
Q Consensus 310 ~dp~~R~t~----~~~l~h~~~~~ 329 (480)
.||.+|+++ .++++|+||..
T Consensus 233 ~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 233 KDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CCHhhcCCCCCCHHHHhCCCCcCC
Confidence 999999976 49999999974
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-46 Score=362.38 Aligned_cols=259 Identities=25% Similarity=0.498 Sum_probs=218.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||++.++.+++.||+|++.+...........+.+|+.++..+. |+||+++++++.+.+.+++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEE
Confidence 36899999999999999999999999999999986543333344566888999999887 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+++|+|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCC
Confidence 999999999999976 4679999999999999999999999999999999999999 456779999999987653322
Q ss_pred c--cccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC-CCCCC
Q 011647 226 V--FKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD-PWPNI 296 (480)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 296 (480)
. ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||......+....+......+..+ ....+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV 236 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccC
Confidence 2 22357999999999874 247889999999999999999999999888877777776654333221 23468
Q ss_pred CHHHHHHHHHhcccCcCC--CCCHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~ 329 (480)
++++.+||.+||..++.+ |++++++++||||+.
T Consensus 237 s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 237 SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred CHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 999999999999765544 689999999999974
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=353.41 Aligned_cols=255 Identities=28% Similarity=0.446 Sum_probs=206.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEEe-----C
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYED-----R 140 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~-----~ 140 (480)
+|.+.+.||+|+||+||+|.++.+++.||+|.+...... ......+.+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 488999999999999999999999999999998654321 122234567777777663 49999999998754 3
Q ss_pred CeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..+++||||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcc
Confidence 458999999975 888888654 348999999999999999999999999999999999999 45677999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-----------
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------- 286 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~----------- 286 (480)
.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 87654444455678999999998854 589999999999999999999999988776655544432110
Q ss_pred c-----CC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 287 D-----FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 287 ~-----~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
. +. ....+.++.++.++|.+||++||++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 00 01124578889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=350.89 Aligned_cols=248 Identities=28% Similarity=0.506 Sum_probs=206.9
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||+|+||+||++.++.+|+.||+|.+.............+..|+++++++. ||||+++++++..+..+++||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999987544333233345667999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCC
Q 011647 155 LFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (480)
Q Consensus 155 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~g 232 (480)
|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+||++ +.++.++|+|||++.............|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCC
Confidence 988876543 48899999999999999999999999999999999999 4567799999999987655444455679
Q ss_pred Cccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHh
Q 011647 233 SAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307 (480)
Q Consensus 233 t~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 307 (480)
++.|+|||++.+ .++.++|||||||++|+|++|..||..... .............+ ....+++++.+||.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~ 233 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLF 233 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHH
Confidence 999999998854 488999999999999999999999976432 22333333333222 2246899999999999
Q ss_pred cccCcCCCCCH----HHHhcCCcccc
Q 011647 308 LHADPKERLSA----AEVLNHPWMRV 329 (480)
Q Consensus 308 L~~dp~~R~t~----~~~l~h~~~~~ 329 (480)
|+.||++||++ +++++||||+.
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcC
Confidence 99999999999 67889999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-46 Score=362.90 Aligned_cols=258 Identities=35% Similarity=0.625 Sum_probs=238.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.+.+.||+|.|++|.+|++..++..||||++.+... +....+.+.+|+++|..+. |||||+++.+.+....+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSLN-HPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-ChHHHHHHHHHHHHHHhcC-CcceeeeeeeeeecceeEE
Confidence 4679999999999999999999999999999999987655 4444566999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+.+|.+++++.+.+++.+..+..++.|+..|++|||+++|||||||++|||+ +.+.++||+|||++..+..+.
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeecccc
Confidence 99999999999999999999999999999999999999999999999999999999 567779999999999999888
Q ss_pred ccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
...+++|++.|.|||++.+. .++.+|+||+|+++|.|+.|.+||.+.+-.+.....+.+.+..+. .++.++.++
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dce~l 285 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDCEDL 285 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechhHHH
Confidence 88999999999999999764 688999999999999999999999999988888888888777665 478899999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|+++|.++|.+|++.+++++|.|......
T Consensus 286 Lrk~lvl~Pskr~~~dqim~~~W~n~~~~ 314 (596)
T KOG0586|consen 286 LRKFLVLNPSKRGPCDQIMKDRWRNDLLE 314 (596)
T ss_pred HHHhhccCccccCCHHHhhhhcccchhhh
Confidence 99999999999999999999999976543
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=362.12 Aligned_cols=261 Identities=29% Similarity=0.437 Sum_probs=209.6
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||+|++.... ........+.+|+.+++.+. ||||+++++++....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCc
Confidence 34578999999999999999999999999999999986432 23344567889999999998 999999999986443
Q ss_pred ----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 142 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCC
Confidence 57999999965 6666553 358999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc-------------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------------- 283 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~------------- 283 (480)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 986544444455689999999999865 588999999999999999999999987664433222211
Q ss_pred ---------CCCcCCCC----------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 284 ---------GHIDFSSD----------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 284 ---------~~~~~~~~----------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
....++.. .....++++++||.+||..||++|||+.|+|+||||.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 11111000 01124678999999999999999999999999999986443
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-45 Score=351.19 Aligned_cols=259 Identities=30% Similarity=0.505 Sum_probs=217.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|+..+.||+|+||+||+|.+..+++.||+|.+.............+.+|+.++++++ |+||+.+++.+..++..++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEE
Confidence 3777889999999999999999999999999987654433334456788999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+.+++|.+.+... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCCC
Confidence 999999998887653 3699999999999999999999999999999999999994 45679999999997765444
Q ss_pred ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|++.|+|||++. ..++.++|+||||+++|+|++|..||.+.........+............+.++.++.+|+
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSIC 236 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHH
Confidence 444567999999999885 4588999999999999999999999987665444333333222222223356889999999
Q ss_pred HHhcccCcCCCCC-----HHHHhcCCccccc
Q 011647 305 KKMLHADPKERLS-----AAEVLNHPWMRVD 330 (480)
Q Consensus 305 ~~~L~~dp~~R~t-----~~~~l~h~~~~~~ 330 (480)
.+||..||++||+ +.++++|+||+..
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 9999999999999 8999999999854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-45 Score=355.86 Aligned_cols=257 Identities=28% Similarity=0.462 Sum_probs=211.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.++.+++.||+|.+..... ......+.+|+.++++++ ||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEE
Confidence 569999999999999999999999999999999865432 222346778999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccceecCCCc
Confidence 999975 888877654 4589999999999999999999999999999999999994 5677999999998764322
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC-----------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------------- 285 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~----------------- 285 (480)
.......+++.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 22334578999999998754 47889999999999999999999998877655444432211
Q ss_pred --CcCCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 286 --IDFSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 286 --~~~~~-------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..++. ...+.+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 00010 1124578899999999999999999999999999999854
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=357.24 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=213.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|++.+.||+|+||.||+|.+..++..+|+|++.... .....+.+.+|+++++++. ||||+++++++.+++.+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEE
Confidence 467999999999999999999999999999999886432 2334567899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+.+++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcchhhhhh
Confidence 999999999999998888899999999999999999999985 799999999999994 4667999999998765322
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc---CC---------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR---GH--------------- 285 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~---~~--------------- 285 (480)
......|++.|+|||++.+ .++.++|||||||++|+|++|+.||...........+.. +.
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence 2234579999999999865 488999999999999999999999976554333221100 00
Q ss_pred ------------------------CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 286 ------------------------IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 286 ------------------------~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
...+..+...++.++++||.+||+.||++|||+.+++.||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 000000112357889999999999999999999999999999854
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-45 Score=372.36 Aligned_cols=253 Identities=28% Similarity=0.463 Sum_probs=218.1
Q ss_pred cceeecceecccCCeEEEEEEEcCC-CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
..|.+.+.||+|+||.||+|....+ +..||+|.+... .......+.+|+.+++.++ |||||++++++..++.+|+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEE
Confidence 4599999999999999999998877 788999976432 3334467788999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 146 IMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCceec
Confidence 9999999999887753 34689999999999999999999999999999999999994 5677999999999876
Q ss_pred CCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 222 KPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 222 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+..+..... ...++
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~s 296 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF---PCPVS 296 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CccCC
Confidence 4332 2344679999999999865 489999999999999999999999998888887777776554321 23578
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.++.++|.+||..||++||++.+++.|+|++.
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 99999999999999999999999999999974
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=348.79 Aligned_cols=254 Identities=37% Similarity=0.673 Sum_probs=212.1
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|++++.||+|+||+||++.+..+++.||+|++....... .......+|+.+++++. ||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhcccccc-cccccccccccccccccccccc
Confidence 788999999999999999999999999999997653321 22233456999999996 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec-CCCCcc
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVF 227 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~-~~~~~~ 227 (480)
|+.+++|.+++...+.+++..+..++.||+.||.+||++||+|+||||+||+++ .++.++|+|||.+... ......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTTEESTSTTSEB
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 999999999999888999999999999999999999999999999999999994 5677999999999863 233445
Q ss_pred ccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 228 KDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
....+++.|+|||++. ..++.++||||||+++|+|++|..||..... ......................+..+.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD 235 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence 5678999999999987 4589999999999999999999999988732 2333333322222222111223489999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+|.+||+.||++|||+.++++||||
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHccCChhHCcCHHHHhcCCCC
Confidence 9999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-45 Score=373.15 Aligned_cols=258 Identities=31% Similarity=0.513 Sum_probs=219.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC---
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--- 141 (480)
...+|.+.+.||+|+||+||+|.+..+++.||||++..... .......+.+|+.++..+. |+||+++++.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccC
Confidence 44689999999999999999999999999999999865433 3445677889999999998 999999988765332
Q ss_pred -----eEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 142 -----SVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 142 -----~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
.+++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEE
Confidence 36899999999999998864 24689999999999999999999999999999999999994 5677999
Q ss_pred eecccceecCCC---CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC
Q 011647 213 TDFGLSVFFKPG---DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 213 ~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
+|||+++..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+..+....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~ 264 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP 264 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 999999865432 22344679999999999875 58999999999999999999999999888877777776654432
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+.+++++.+++.+||+.||.+||++.++++|||++..
T Consensus 265 ---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 265 ---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 224689999999999999999999999999999998753
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-45 Score=359.83 Aligned_cols=260 Identities=28% Similarity=0.438 Sum_probs=211.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+.++|.+.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcC-CCCccccceeeccccccc
Confidence 4578999999999999999999999999999999986432 23344567889999999998 99999999987543
Q ss_pred --CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 --HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..+|+||||+.+ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCc
Confidence 357999999965 77776643 48899999999999999999999999999999999999 45677999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc----------
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID---------- 287 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~---------- 287 (480)
+............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh
Confidence 87654444455689999999998865 5889999999999999999999999887765555444321110
Q ss_pred ------------CC----------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 288 ------------FS----------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 288 ------------~~----------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+. .......+.++++||.+||+.||.+|||+.++|+||||.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 00 0001123567899999999999999999999999999975433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=351.47 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=206.8
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.+.+.||+||.+.||++...+. +.||+|.+... ..+...+.-+.+|+..|.+|.+|.+||+++++-..++.+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 46799999999999999999998764 45666655432 23555678899999999999999999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||= ..+|..+|.+... ++.-.++.+..||+.|+.++|..||||.||||.|+|+. .|.+||+|||+|..+...
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred Eeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCcc
Confidence 99986 5699998887665 44468899999999999999999999999999999996 677999999999988755
Q ss_pred Cc---cccCCCCccccccccccc------------cCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHcCCCcC
Q 011647 225 DV---FKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDF 288 (480)
Q Consensus 225 ~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~ 288 (480)
.. ....+||+.|||||.+.. ..++++||||||||||+|+.|++||.... ...-+..|..-....
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEI 592 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccc
Confidence 42 346799999999998731 15789999999999999999999996543 222333333322211
Q ss_pred CCCCCCCCC--HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 289 SSDPWPNIS--SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 289 ~~~~~~~~~--~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.++.+| .++.+++..||..||.+|||+.++|+|||++..
T Consensus 593 ---efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 593 ---EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred ---cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 122222 338999999999999999999999999999874
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-45 Score=363.29 Aligned_cols=257 Identities=28% Similarity=0.441 Sum_probs=212.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-----e
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----S 142 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-----~ 142 (480)
.|.+++.||+|+||+||+|.+..+++.||||.+... .........+.+|+.+++.++ ||||+++++++.... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccce
Confidence 377889999999999999999999999999988543 223334567889999999998 999999999998776 7
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.|+||||+. ++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecc
Confidence 899999995 5888888888889999999999999999999999999999999999999 456789999999998654
Q ss_pred CCC--ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC--------------
Q 011647 223 PGD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG-------------- 284 (480)
Q Consensus 223 ~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~-------------- 284 (480)
... ......+++.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 322 2234568999999998865 3788999999999999999999999887765554443221
Q ss_pred ---------CCcCCC-----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 285 ---------HIDFSS-----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 285 ---------~~~~~~-----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
....+. ......++++.+||.+||+.||++|||+.++|+||||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 000000 1123468899999999999999999999999999999764
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=360.40 Aligned_cols=261 Identities=29% Similarity=0.439 Sum_probs=210.1
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+.++|.+.+.||+|+||.||+|.+..+++.||||.+.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhC-CCchhceeeeeeccccc
Confidence 35578999999999999999999999999999999986432 23344567889999999998 99999999988643
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...++||||+.+ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcc
Confidence 357999999965 67666643 58999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC------------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG------------ 284 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~------------ 284 (480)
++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 987654444455689999999998865 5889999999999999999999999876654333222110
Q ss_pred ----------CCcC-----C-----------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 285 ----------HIDF-----S-----------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 285 ----------~~~~-----~-----------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
...+ + .......+.++++||.+||..||++|||+.|+|+||||.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 0000 0 0011224577899999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=352.18 Aligned_cols=257 Identities=30% Similarity=0.520 Sum_probs=228.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|+.-+.||+||||.||-++-+.||+.||.|.+.+.............+|-.+|.+++ .++||.+-..|++.+.+|+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDALCL 262 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceEE
Confidence 356888899999999999999999999999999998766655555567889999999998 8999999999999999999
Q ss_pred EEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||..|+||+|.-.|.+.+ .|++..+..++.+|+.||++||+.+||.|||||+|||+ ++.|+|+|+|+|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCC
Confidence 999999999988887766 69999999999999999999999999999999999999 7789999999999999998
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHcCCCcCCCCCCCCCCH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
+......+||.+|||||++.. .|+...|.|||||++|+|+.|+.||...... ++-+.++.....++ ..+|+
T Consensus 340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~----~kFS~ 415 (591)
T KOG0986|consen 340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS----DKFSE 415 (591)
T ss_pred CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc----cccCH
Confidence 888888899999999999964 5999999999999999999999999775543 44444555444444 47899
Q ss_pred HHHHHHHHhcccCcCCCC-----CHHHHhcCCccccc
Q 011647 299 SAKDIVKKMLHADPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
+++++.+.+|++||.+|. +++++.+||||+.-
T Consensus 416 eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 416 EAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 999999999999999998 67899999999863
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-47 Score=366.27 Aligned_cols=257 Identities=29% Similarity=0.504 Sum_probs=224.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|.|+..||.|+||+||+|..+.++-..|.|+|.. ...+.++.+.-||.||..+. ||+||++++.|..++.++|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwi 106 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWI 106 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEE
Confidence 4568999999999999999999999998889998843 35567889999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~- 223 (480)
+.|||.||-....+..- ..+++.++..+++|++.||.|||+++|||||||..|||++. +|.|+|+|||.+.....
T Consensus 107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl---dGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL---DGDIRLADFGVSAKNKST 183 (1187)
T ss_pred EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe---cCcEeeecccccccchhH
Confidence 99999999988777654 56999999999999999999999999999999999999964 56699999999765432
Q ss_pred CCccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 224 GDVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.....+++|||+|||||+.. ..|++++||||||++|.||..+.+|....++..++-+|....++....+ ..++
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqP-S~Ws 262 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQP-SHWS 262 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCc-chhh
Confidence 22446789999999999762 4699999999999999999999999999888888877777655443332 4678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+.+|+.+||.+||+.||+++++|+||||+..
T Consensus 263 ~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 263 RSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred hHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 899999999999999999999999999999854
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-46 Score=357.11 Aligned_cols=256 Identities=27% Similarity=0.466 Sum_probs=223.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
-..|.-.+.||.|+||-||.|++..+...||||.+........+.-+.+..|+..|+++. |||++.+-++|..+...++
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWL 103 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWL 103 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHH
Confidence 345777899999999999999999999999999998766656666678999999999999 9999999999999999999
Q ss_pred EEecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||||-| +-.|++. ..+++.+..+..|+.+.+.||.|||+.+.||||||..|||+ .+.+.|||+|||.|....+
T Consensus 104 VMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~P- 178 (948)
T KOG0577|consen 104 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMAP- 178 (948)
T ss_pred HHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcCc-
Confidence 9999965 6667664 34679999999999999999999999999999999999999 5788899999999987654
Q ss_pred CccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.++++|||+|||||++- |.|+-++||||||++..||...++|+...+....+..|..+..+... .+.+|..+
T Consensus 179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq--s~eWS~~F 254 (948)
T KOG0577|consen 179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--SNEWSDYF 254 (948)
T ss_pred --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC--CchhHHHH
Confidence 36789999999999873 67999999999999999999999998887776666666665443322 24678999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.|+..||++-|.+|||.+++|.|+|+....
T Consensus 255 ~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 255 RNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred HHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 9999999999999999999999999998654
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=347.11 Aligned_cols=253 Identities=35% Similarity=0.683 Sum_probs=223.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||++.+..+++.||+|++...........+.+.+|+++++++. ||||+++++++..+..+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEE
Confidence 36899999999999999999999999999999987655444455678899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+|+||+|.||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCC--
Confidence 9999999999999888899999999999999999999999999999999999999 45677999999999876443
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+..+...++ ..++..++++|.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~ 230 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLIR 230 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCHHHHHHHH
Confidence 334578999999998754 578899999999999999999999988777666666666554443 356899999999
Q ss_pred HhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 306 KMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+||..||.+|+ +++++++||||+.
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 231 NLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred HHccCCHHHccCcccCCHHHHHcCccccc
Confidence 99999999999 9999999999964
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=382.18 Aligned_cols=264 Identities=32% Similarity=0.542 Sum_probs=217.9
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-- 139 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-- 139 (480)
.+....+|.+++.||+|+||+||+|.+..++..||+|++..... .......+.+|+.+++++. |||||+++++|..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKA 85 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecC
Confidence 34455789999999999999999999999999999999875433 3344577899999999998 9999999998854
Q ss_pred CCeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-------CCeecCCCCcceecccC----
Q 011647 140 RHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSM-------GVMHRDLKPENFLFSSS---- 204 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-------~ivH~Dlkp~Nil~~~~---- 204 (480)
...+||||||+.+++|.++|.. .+.+++..++.|+.||+.||.|||+. +||||||||+||||...
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 4578999999999999998865 35799999999999999999999985 49999999999999642
Q ss_pred ----------CCCCCeeEeecccceecCCCCccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCC
Q 011647 205 ----------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWG 271 (480)
Q Consensus 205 ----------~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~ 271 (480)
+....+||+|||++.............||+.|+|||++.+ .++.++||||||||||+|++|..||..
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 2234589999999987654444455689999999998742 478899999999999999999999987
Q ss_pred CChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
......+......... .+....+.++.+||..||..+|.+||++.++|.|||++..
T Consensus 246 ~~~~~qli~~lk~~p~---lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 246 ANNFSQLISELKRGPD---LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CCcHHHHHHHHhcCCC---CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 6554333333332222 2234678999999999999999999999999999999744
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-44 Score=339.14 Aligned_cols=255 Identities=28% Similarity=0.477 Sum_probs=215.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC--hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.|.+.+.||+|++|.||+|.+..+++.||+|.+....... ......+.+|+.+++++. ||||+++++++.++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEE
Confidence 35899999999999999999999999999999986543211 223467889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|+||+++++|.+.+...+.+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|+|||++......
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceecccc
Confidence 9999999999999998888899999999999999999999999999999999999994 5677999999998765432
Q ss_pred Ccc----ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 225 DVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 225 ~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
... ....|+..|+|||++.+ .++.++||||||+++|+|++|+.||...........+....... .....++..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP--QLPSHVSPD 235 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCC--CCCccCCHH
Confidence 211 23568889999999865 47899999999999999999999998766555444443332221 122467899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+.++|.+||..+|++|||+.++++||||
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-44 Score=357.86 Aligned_cols=254 Identities=26% Similarity=0.433 Sum_probs=205.7
Q ss_pred ccccceeecceecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+..+|.+++.||+|+||.||+|... .+++.||+|.+... ....+|+.+++++. ||||+++++++....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~-h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTIS-HRAIINLIHAYRWKS 159 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcC-CCCccceeeeEeeCC
Confidence 34567999999999999999999864 34678999987542 23568999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++|||++. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++...
T Consensus 160 ~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 160 TVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKL 235 (392)
T ss_pred EEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCcccccc
Confidence 9999999995 6888988777889999999999999999999999999999999999999 45677999999999765
Q ss_pred CCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcC----CCcCCC
Q 011647 222 KPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRG----HIDFSS 290 (480)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~----~~~~~~ 290 (480)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+..+... ...++.
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 43221 234579999999999865 588999999999999999999999976542 1112221110 000000
Q ss_pred -----------------------CC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 291 -----------------------DP---WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 291 -----------------------~~---~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+. ...++.++.++|.+||..||++|||+.++|.||||+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 00 01346788999999999999999999999999999753
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-46 Score=343.61 Aligned_cols=258 Identities=29% Similarity=0.547 Sum_probs=237.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.++..||+|+||+|.+|..+.+...||||++++.-....++++.-..|-++|.-....|.+++++.+|+.-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 35799999999999999999999999999999999998888888888888999999877778999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec-CCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~-~~~ 224 (480)
||||+.||+|.-.+.+-+++.+..+..++..|+-||-+||++|||.||||.+|||+ +.+++|||+|||+++.- -.+
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999 66888999999999863 234
Q ss_pred CccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
....+++|||.|+|||++. ..|+.++|.||+||+||||+.|++||.+.++.+++..|......+|. .+|.++.++
T Consensus 505 ~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~i 580 (683)
T KOG0696|consen 505 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVAI 580 (683)
T ss_pred cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHHH
Confidence 4567789999999999886 56999999999999999999999999999999999999998887775 689999999
Q ss_pred HHHhcccCcCCCCC-----HHHHhcCCccccc
Q 011647 304 VKKMLHADPKERLS-----AAEVLNHPWMRVD 330 (480)
Q Consensus 304 i~~~L~~dp~~R~t-----~~~~l~h~~~~~~ 330 (480)
+...|.+.|.+|.. -.++-.||||+.-
T Consensus 581 ckg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 581 CKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 99999999999984 4688999999853
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=347.11 Aligned_cols=258 Identities=28% Similarity=0.471 Sum_probs=212.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++++. ||||+++++++..++.+++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEE
Confidence 579999999999999999999999999999999864332 223356778999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchhccCCCC
Confidence 99996 5888887654 5689999999999999999999999999999999999994 5677999999998764322
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc---------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------------- 287 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~--------------- 287 (480)
.......+++.|+|||++.+ .++.++|||||||++|+|++|++||...+..+....+......
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 22234567899999998754 4788999999999999999999999887765554433221100
Q ss_pred ----CCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 288 ----FSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 288 ----~~~-------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
++. ...+.+++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 000 01235788999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=383.76 Aligned_cols=259 Identities=31% Similarity=0.534 Sum_probs=231.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+++.||+|+||.|.+++++.+++.||+|++.+.......+...|+.|-.+|.... .+=|++++-.|+++.++|
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceE
Confidence 4578999999999999999999999999999999998866666666788999999998766 788999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+||+|..++.+.+++|+..++.|+..|+.||+-||+.|+|||||||+|||+ +..|+|||+|||.+..+..+
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCC
Confidence 999999999999999998899999999999999999999999999999999999999 67899999999999887643
Q ss_pred C--ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC--CCcCCCCCCC
Q 011647 225 D--VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWP 294 (480)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~ 294 (480)
. .....+|||.|+|||++. +.|++.+|.||+||++|||+.|..||+..+--+.+.+|.+- .+.|| .-.
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~ 306 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DET 306 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--ccc
Confidence 3 234568999999999984 35899999999999999999999999999988888888876 44555 334
Q ss_pred CCCHHHHHHHHHhcccCcCCCCC---HHHHhcCCccccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRVD 330 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t---~~~~l~h~~~~~~ 330 (480)
.+|+++++||.++|. +|+.|.. ++++..||||.-.
T Consensus 307 ~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 307 DVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred ccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 699999999999996 5889998 9999999999754
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=350.64 Aligned_cols=249 Identities=27% Similarity=0.468 Sum_probs=193.6
Q ss_pred cceecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--CCeEEEEE
Q 011647 72 GRELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVNLIM 147 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~~~~~lv~ 147 (480)
+++||+|+||+||+|.++ .+++.||+|.+.... ....+.+|+.+++++. ||||+++++++.. +..+++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999976 467899999986432 1245778999999998 9999999998854 46689999
Q ss_pred ecCCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC-CCCCCeeEeeccc
Q 011647 148 DLCAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AEDSPLKATDFGL 217 (480)
Q Consensus 148 e~~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~ikl~Dfg~ 217 (480)
||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9995 5887776532 248999999999999999999999999999999999999543 3457899999999
Q ss_pred ceecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHH
Q 011647 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------SIFDAIL 282 (480)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~---------~~~~~~~ 282 (480)
+....... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 98754321 2234678999999998854 4789999999999999999999999654321 1111111
Q ss_pred cCCC--------------------------cC--------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 283 RGHI--------------------------DF--------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 283 ~~~~--------------------------~~--------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.... .+ ........+.++.+||.+||+.||.+|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1000 00 000011235678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=356.04 Aligned_cols=260 Identities=28% Similarity=0.453 Sum_probs=210.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||.+.... ........+.+|+.+++++. ||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccccc
Confidence 34578999999999999999999999999999999986432 12233466789999999998 99999999887543
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...|++++++ +++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~ 164 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGL 164 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCcc
Confidence 4578999998 778877664 4579999999999999999999999999999999999999 4567799999999
Q ss_pred ceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC---------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------- 286 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~--------- 286 (480)
+..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+.....
T Consensus 165 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 165 ARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 987543 2345679999999998864 478999999999999999999999987665444433321100
Q ss_pred --------------cCCC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 287 --------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 287 --------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
..+. ..+...++.+.+||.+||..||.+|||+.++|+||||.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 0000 012245678899999999999999999999999999986544
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-45 Score=349.52 Aligned_cols=245 Identities=27% Similarity=0.468 Sum_probs=211.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....+++++.||+|-||.||.|.+..+ ..||+|.++.... ..+.+.+|+++|++|+ |+|||++++++..++.+|
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceE
Confidence 345677889999999999999999764 4799999876433 2367889999999999 999999999999988999
Q ss_pred EEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
||||||+.|+|.++|.. .+.+.......++.|||+|++||+++++|||||-..|||| +++..+||+|||+|+...
T Consensus 278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccC
Confidence 99999999999999987 4569999999999999999999999999999999999999 677889999999999544
Q ss_pred CCCccccCCC---Ccccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PGDVFKDLVG---SAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~~~~~~~~g---t~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.+ .+....| ...|.|||.+. +.++.+||||||||+||||+| |+.||.+.+..+.+..+.++.-- +..+.+|
T Consensus 355 d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl---p~P~~CP 430 (468)
T KOG0197|consen 355 DD-EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL---PRPEGCP 430 (468)
T ss_pred CC-ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC---CCCCCCC
Confidence 33 3322222 34699999987 569999999999999999998 99999999999999999887542 2235799
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHh
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVL 322 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l 322 (480)
+++.+++..||+.+|++|||.+.+.
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHH
Confidence 9999999999999999999998664
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-44 Score=353.79 Aligned_cols=249 Identities=23% Similarity=0.359 Sum_probs=199.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|.+.+.||+|+||.||+|.+..++..||+|+.... ....|+.+++++. ||||+++++++......++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCC-CCCCcChhheEEeCCeeEEE
Confidence 4699999999999999999999999999999975332 2346899999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||++. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++.......
T Consensus 136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCc
Confidence 99995 588887765 4569999999999999999999999999999999999999 456779999999997644333
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH----------HHHHHHHcC----CCcCCC
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ----------SIFDAILRG----HIDFSS 290 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~----------~~~~~~~~~----~~~~~~ 290 (480)
......||+.|+|||++.+ .++.++|||||||++|+|+++..|+...... ..+..+... ...++.
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 3445679999999999864 5899999999999999999865554322110 111111110 000110
Q ss_pred --------------------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 291 --------------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 291 --------------------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.....++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 001245778889999999999999999999999999974
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=356.33 Aligned_cols=249 Identities=23% Similarity=0.395 Sum_probs=202.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++++++. |||||++++++..++..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEE
Confidence 4579999999999999999999999999999996421 34568999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||++. ++|.+++... +.+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceecccc
Confidence 999995 6888887654 5699999999999999999999999999999999999994 5667999999999865432
Q ss_pred C---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHcCCCc---C-
Q 011647 225 D---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--------EQSIFDAILRGHID---F- 288 (480)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~--------~~~~~~~~~~~~~~---~- 288 (480)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ...+...+...... +
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 2 1224579999999999865 48999999999999999999876653321 22333333222111 0
Q ss_pred -----------------------CCCCC---CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 289 -----------------------SSDPW---PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 289 -----------------------~~~~~---~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
....| ..++.++.+||.+||+.||.+|||+.|+|+||||+
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~ 459 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ 459 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence 01112 14567899999999999999999999999999996
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-44 Score=338.15 Aligned_cols=254 Identities=29% Similarity=0.477 Sum_probs=212.8
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.+. ||||+++++.+...+.+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEE
Confidence 357999999999999999999999999999999986432 233456788999999997 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATI 160 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEccCcc
Confidence 999999999999998888999999999999999999999999999999999999994 56679999999987654221
Q ss_pred -ccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC-CCCCCCCHH
Q 011647 226 -VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISSS 299 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 299 (480)
......|++.|+|||++. +.++.++|+|||||++|+|++|..||...................+. .....++..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNS 240 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHH
Confidence 223457899999999873 34788999999999999999999999765544333333332222111 112257889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
+.++|.+||+.+|++|||+.++++|||
T Consensus 241 ~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 241 FHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=360.35 Aligned_cols=252 Identities=27% Similarity=0.487 Sum_probs=216.4
Q ss_pred eecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCC
Q 011647 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGG 153 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 153 (480)
.||+|.||+||.|++..+...+|||.+... +....+-+..||.+.++|+ |.|||++++.+.+++.+-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 499999999999999999999999998643 3455678999999999999 999999999999999999999999999
Q ss_pred chHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-Ccccc
Q 011647 154 ELFDRIIAK-GHY--SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKD 229 (480)
Q Consensus 154 ~L~~~l~~~-~~~--~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~~~~~ 229 (480)
+|.+++... |++ .+.++..+.+||++||.|||++.|||||||-+||||+ .-.|.+||+|||-++.+..- ....+
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCccccc
Confidence 999999875 566 7899999999999999999999999999999999997 45788999999999876433 33456
Q ss_pred CCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 230 LVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 230 ~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
+.||..|||||++.. +|+.++|||||||++.||.||++||........ ....-+.+....+....++.+++.||.+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyKvHP~iPeelsaeak~Filr 814 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYKVHPPIPEELSAEAKNFILR 814 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcceecCCCCcHHHHHHHHHHHHH
Confidence 889999999999963 599999999999999999999999976443221 2233344444444445788999999999
Q ss_pred hcccCcCCCCCHHHHhcCCcccccCC
Q 011647 307 MLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 307 ~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|+.+||.+||++.++|..||++....
T Consensus 815 cFepd~~~R~sA~~LL~DpFlq~~~k 840 (1226)
T KOG4279|consen 815 CFEPDPCDRPSAKDLLQDPFLQHNNK 840 (1226)
T ss_pred HcCCCcccCccHHHhccCcccccCCC
Confidence 99999999999999999999987633
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-44 Score=345.95 Aligned_cols=257 Identities=34% Similarity=0.604 Sum_probs=220.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||+||+|.+..+++.||+|.+.............+.+|+++++.+. ||||+++++.+......++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEE
Confidence 6899999999999999999999999999999997655443345677899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+.|++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhhcccccc
Confidence 999999999988754 5699999999999999999999999999999999999994 46779999999987543211
Q ss_pred ------------------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 011647 226 ------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE 274 (480)
Q Consensus 226 ------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~ 274 (480)
......||..|+|||++.+ .++.++||||||+++|+|++|..||.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 1123468899999998865 478899999999999999999999988887
Q ss_pred HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCC----HHHHhcCCccccc
Q 011647 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS----AAEVLNHPWMRVD 330 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~~~l~h~~~~~~ 330 (480)
...+..+......++. ...++..+.++|.+||..||++||| ++++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 238 DETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 7777666655444433 2337899999999999999999999 9999999999754
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=342.35 Aligned_cols=257 Identities=31% Similarity=0.574 Sum_probs=220.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|+||.||++.+..+++.||+|.+...........+.+.+|+.+++.+. ||||+++++.+..++.+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEEE
Confidence 5889999999999999999999999999999987554333344567889999999997 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC--
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-- 225 (480)
||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +..+.++|+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCccc
Confidence 999999999999888889999999999999999999999999999999999999 456779999999986421100
Q ss_pred --------------ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC
Q 011647 226 --------------VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (480)
Q Consensus 226 --------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (480)
......|+..|+|||.+. ..++.++|+|||||++|+|++|..||.+....+....+.......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 011245788999999875 45889999999999999999999999988887777777666554444
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHhcCCcccc
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRV 329 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~h~~~~~ 329 (480)
.. ..++.++.++|.+||+.||++||+ +.++|+||||..
T Consensus 238 ~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 238 GD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred cc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 32 267899999999999999999997 799999999965
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=336.85 Aligned_cols=256 Identities=30% Similarity=0.503 Sum_probs=217.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++.+. ||||+++++.+.++..+++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEE
Confidence 36889999999999999999999999999999986432 2334567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
+||+++++|.+++... .+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++...... .
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEcccccceeeccccc
Confidence 9999999999988765 899999999999999999999999999999999999994 5677999999999876543 2
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+.....+.. ....+++++.+++
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 231 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSL--EGNKFSKPFKDFV 231 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCC--cccccCHHHHHHH
Confidence 2344578899999998864 488999999999999999999999987665555544444322211 1122789999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+||..+|++|||++++++||||+...
T Consensus 232 ~~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 232 SLCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred HHHhhCChhhCcCHHHHhhChhhcCCC
Confidence 999999999999999999999998653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=339.78 Aligned_cols=256 Identities=28% Similarity=0.519 Sum_probs=212.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++.+.||+|+||.||+|.++.+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 369999999999999999999999999999999864322 2223356789999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||+++++|..++.....+++..+..++.||+.||.|||+.|++||||||+||+++ .++.++|+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccceecCCCcc
Confidence 99999988887777777899999999999999999999999999999999999994 56679999999998765433
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-----------------
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------------- 286 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~----------------- 286 (480)
......++..|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+.....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 2334568899999998754 478899999999999999999999987766544433321100
Q ss_pred --cCCC--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 287 --DFSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 287 --~~~~--------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
..+. ..++.++..+.+||.+||..+|++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0000 0124578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=336.83 Aligned_cols=255 Identities=25% Similarity=0.475 Sum_probs=211.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
+..+.|.+.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++.++.+||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 34567999999999999999999999999999999986432 23467889999999996699999999998653
Q ss_pred ---CeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
..+++||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++ +++.++|+||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Df 155 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDF 155 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccC
Confidence 4689999999999999988763 4689999999999999999999999999999999999994 5667999999
Q ss_pred ccceecCCC-CccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC
Q 011647 216 GLSVFFKPG-DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 216 g~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|++...... .......|++.|+|||++. ..++.++||||+||++|+|++|..||...........+.... .
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~ 233 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--A 233 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--C
Confidence 998865432 2233467899999999874 247789999999999999999999997766544443333221 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.......++.++.+|+.+||..+|.+|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 222234678999999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=343.06 Aligned_cols=256 Identities=26% Similarity=0.388 Sum_probs=212.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|++++++++ ||||+++++++.+++.+++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEe
Confidence 5899999999999999999999999999999886431 2334567889999999997 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||+++++|.+++...+.+++..+..++.|++.||.|||+ .+++||||||+|||++ .++.+||+|||++...... .
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~-~ 154 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS-M 154 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCccccccc-c
Confidence 999999999999888889999999999999999999997 5999999999999994 5667999999998765332 2
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC-----------------
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF----------------- 288 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~----------------- 288 (480)
.....|++.|+|||++.+ .++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 345678999999998865 47889999999999999999999997655433322221110000
Q ss_pred -----------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 289 -----------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 289 -----------------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+..+...++.++.+++.+||..+|++|||+.++++||||...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 011112367889999999999999999999999999999754
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=335.63 Aligned_cols=256 Identities=23% Similarity=0.432 Sum_probs=218.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|.++.+||+|+||.||+|.++.+|..+|||.+... .+++.+..|+.+++++. .|++|++|+.|.....++||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEee
Confidence 3488899999999999999999999999999998643 35688999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||..|++.+.+. +++++++.++..+++..+.||+|||...-||||||..|||+ +.++..||+|||.|-.+....
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhH
Confidence 99999999999886 45679999999999999999999999999999999999999 457789999999998765432
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
..++.+|||.|||||++.. +|+.++||||||++..||..|++||....+...+-.|-...+ .........|.++.+|
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PP-PTF~KPE~WS~~F~DF 262 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPP-PTFKKPEEWSSEFNDF 262 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCC-CCCCChHhhhhHHHHH
Confidence 3456789999999999975 699999999999999999999999987665433322222111 1111123568899999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|++||.++|++|.|+-++++|||.+....
T Consensus 263 i~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 263 IRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred HHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 99999999999999999999999996644
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=339.11 Aligned_cols=254 Identities=30% Similarity=0.458 Sum_probs=207.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|++|.||+|.+..++..||+|.+..... .......+.+|+.+++++. ||||+++++++.++..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEE
Confidence 48889999999999999999999999999999865322 2233467889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 148 DLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 148 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCC
Confidence 9997 5888877542 468999999999999999999999999999999999999 45677999999998765322
Q ss_pred C-ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC---------------
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------------- 286 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~--------------- 286 (480)
. ......+++.|+|||++.+ .++.++|||||||++|+|++|++||.+.........+.....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 1 2233467899999998754 368899999999999999999999987665433322211100
Q ss_pred ----------cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 287 ----------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 287 ----------~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.........+++++.++|.+||..||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00011134578999999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-44 Score=350.53 Aligned_cols=250 Identities=24% Similarity=0.375 Sum_probs=200.2
Q ss_pred ccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.++|++.+.||+|+||.||+|.+. .+++.||||++.... .......+.+|+.++.++.+||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 467999999999999999999853 345689999986432 2334567899999999995599999999988654
Q ss_pred -CeEEEEEecCCCCchHHHHHhc---------------------------------------------------------
Q 011647 141 -HSVNLIMDLCAGGELFDRIIAK--------------------------------------------------------- 162 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 162 (480)
+.+++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4689999999999999988642
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc---cccCCCCc
Q 011647 163 -----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSA 234 (480)
Q Consensus 163 -----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~ 234 (480)
..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....... .....+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 237788899999999999999999999999999999999 4567799999999986533221 12234667
Q ss_pred cccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH-HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccC
Q 011647 235 YYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (480)
Q Consensus 235 ~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 311 (480)
.|+|||++.+ .++.++|||||||++|||++ |..||.+..... ....+..+.. .. ....+++++.+++.+||+.|
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~li~~cl~~d 317 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR-MR--APENATPEIYRIMLACWQGD 317 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC-CC--CCCCCCHHHHHHHHHHccCC
Confidence 8999998754 58999999999999999997 999998755433 3333333322 11 12467899999999999999
Q ss_pred cCCCCCHHHHhc
Q 011647 312 PKERLSAAEVLN 323 (480)
Q Consensus 312 p~~R~t~~~~l~ 323 (480)
|.+|||+.++++
T Consensus 318 p~~RPs~~el~~ 329 (338)
T cd05102 318 PKERPTFSALVE 329 (338)
T ss_pred hhhCcCHHHHHH
Confidence 999999999975
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=334.65 Aligned_cols=253 Identities=30% Similarity=0.531 Sum_probs=213.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh------hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR------DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
+|.+++.||.|+||.||+|.+..+++.||+|.+........ ...+.+.+|+.+++++. ||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 47889999999999999999998899999998865432221 22356889999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
..++||||+++++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCccc
Confidence 999999999999999999888889999999999999999999999999999999999999 45677999999998876
Q ss_pred CCCC-------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 222 KPGD-------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 222 ~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
.... ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||...........+..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~ 233 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIP 233 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCC
Confidence 4211 1123468899999998864 478899999999999999999999987665544444333211 1122
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
..++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 3578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=336.42 Aligned_cols=254 Identities=28% Similarity=0.470 Sum_probs=211.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
..+|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++++. ||||+++++.+..++.+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEE
Confidence 457999999999999999999999999999999986432 233466889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecccc
Confidence 99999999999999888889999999999999999999999999999999999999 456679999999998654322
Q ss_pred -ccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC-CCCCCCCHH
Q 011647 226 -VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISSS 299 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 299 (480)
......|++.|+|||.+. ..++.++|+||+||++|+|++|..||...........+.......+. .....++..
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSST 240 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHH
Confidence 223457889999999873 33678999999999999999999999765543332222222222111 111357899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
+.++|.+||..+|++|||++++|+|+|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=334.40 Aligned_cols=251 Identities=31% Similarity=0.530 Sum_probs=213.7
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++....+|||++++++++..++.+++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999999999999999986544323333344556666665555699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~g 232 (480)
++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++..... .....|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~---~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLE---NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceeccc---cccCCC
Confidence 99999998888899999999999999999999999999999999999994 567799999999876432 234568
Q ss_pred Ccccccccccccc-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccC
Q 011647 233 SAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (480)
Q Consensus 233 t~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 311 (480)
++.|+|||.+.+. ++.++||||||+++|+|++|..||...........+......++......+++++.++|.+||+.+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 235 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence 8999999988654 788999999999999999999999888887777777666655555444568999999999999999
Q ss_pred cCCCC---CHHHHhcCCcccc
Q 011647 312 PKERL---SAAEVLNHPWMRV 329 (480)
Q Consensus 312 p~~R~---t~~~~l~h~~~~~ 329 (480)
|++|| +++|+|+||||+.
T Consensus 236 p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 236 PAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred HHHccCCCcHHHHHcChHhhc
Confidence 99999 5579999999974
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=363.95 Aligned_cols=251 Identities=29% Similarity=0.483 Sum_probs=210.6
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEE-EEEe-
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG-AYED- 139 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~-~~~~- 139 (480)
...-..++++.+.|.+|||+.||+|.+...|..||+|++... +....+.+.+||.+|++|.+|+|||.+++ ....
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~ 108 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR 108 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc
Confidence 334456788999999999999999999988899999987543 66778899999999999999999999999 3221
Q ss_pred -----CCeEEEEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCe
Q 011647 140 -----RHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 140 -----~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
.-.+.|.||||.||.|.+++.. ..+|++.++++|++++++|+.+||... |||||||-+|||| ..++++
T Consensus 109 ~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl---s~~g~~ 185 (738)
T KOG1989|consen 109 SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL---SADGNY 185 (738)
T ss_pred cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---cCCCCE
Confidence 1347799999999999999974 355999999999999999999999998 9999999999999 456789
Q ss_pred eEeecccceecCCCC-ccc---------cCCCCcccccccccc---c-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 011647 211 KATDFGLSVFFKPGD-VFK---------DLVGSAYYVAPEVLR---R-NYGAEADIWSAGVILYILLSGVPPFWGETEQS 276 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~-~~~---------~~~gt~~y~aPE~~~---~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~ 276 (480)
||||||.+....... ... ....|+.|+|||++. + ..+.|+|||||||+||-|+....||.....
T Consensus 186 KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-- 263 (738)
T KOG1989|consen 186 KLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-- 263 (738)
T ss_pred EeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--
Confidence 999999987532221 111 124689999999874 3 589999999999999999999999977644
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
-+|+.+.+.+|. ++.++..+.+||..||+.||++||++.+++++
T Consensus 264 --laIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 264 --LAILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred --eeEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 346677776665 46899999999999999999999999999865
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=338.30 Aligned_cols=259 Identities=27% Similarity=0.486 Sum_probs=216.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
...+|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+. ||||+++++.+......+
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELW 93 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEE
Confidence 44689999999999999999999999999999999865432 23467889999999987 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcccc
Confidence 99999999999998754 468999999999999999999999999999999999999 45677999999998765432
Q ss_pred C-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. ......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+...... .......++..+.+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 248 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRD 248 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC-CCCCccccCHHHHH
Confidence 2 2234578999999998865 4789999999999999999999999877664443333322211 11122468899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
++.+||..+|++|||+.++++||||.....
T Consensus 249 li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 999999999999999999999999987644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=337.01 Aligned_cols=258 Identities=29% Similarity=0.487 Sum_probs=216.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..+.|++.+.||.|+||.||+|.+..+++.||+|.+... .....+.+.+|+.+++.+. ||||+++++.+..++.++
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEE
Confidence 346799999999999999999999999999999998643 3345677889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+++++|..++.+ ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||++.....
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceeccc
Confidence 99999999999887754 45689999999999999999999999999999999999994 567799999999875432
Q ss_pred C-CccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 224 G-DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
. .......+++.|+|||++. ..++.++|||||||++|+|++|..||...........+.....+. ......+
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LSQPSKW 241 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc-CCCCccc
Confidence 2 2223456889999999874 236778999999999999999999998777655555554432211 1122467
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.++.++|.+||..+|++||+++++++||||+..
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 8899999999999999999999999999999754
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=341.40 Aligned_cols=254 Identities=27% Similarity=0.522 Sum_probs=206.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++++. ||||+++++++.+...+++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEE
Confidence 48899999999999999999999999999999865322 2223356778999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
||+.+ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...... .
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCCCC
Confidence 99964 78777765 56799999999999999999999999999999999999994 5677999999998865432 2
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHcCCC--------------c-
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFW-GETEQSIFDAILRGHI--------------D- 287 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~-~~~~~~~~~~~~~~~~--------------~- 287 (480)
......+++.|+|||++.+ .++.++|||||||++|+|++|..||. +.+..+.+..+..... .
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 2334567899999998764 36889999999999999999988864 3443333333321100 0
Q ss_pred --CC--------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 --FS--------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 --~~--------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++ ....+.+++++.++|.+||..||.+|||++++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 01124578999999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=330.16 Aligned_cols=252 Identities=24% Similarity=0.466 Sum_probs=217.5
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|++|.||+|.+..++..|++|.+..... .......+.+|+.++++++ ||||+++++.+.+.+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEE
Confidence 37888999999999999999999999999999865433 3345677899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++++|.+++... ..+++..++.++.|++.||.|||++|++|+||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCcc
Confidence 999999999998764 5689999999999999999999999999999999999994 56779999999988765432
Q ss_pred c-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
. .....|++.|+|||++.+ .++.++|+||||+++|+|++|..||...........+..+..+... ..++.++.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQL 232 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2 234578999999998864 4788999999999999999999999888877766666655432211 2578999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+.+||+.+|++||++.++++|||+
T Consensus 233 i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 233 IDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999999999999999995
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=337.33 Aligned_cols=251 Identities=31% Similarity=0.522 Sum_probs=209.4
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||+|+||+||+|.+..+|+.||+|.+.............+.+|+.++++++ ||||+++++.+...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999987544333344556778999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCC
Q 011647 155 LFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (480)
Q Consensus 155 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~g 232 (480)
|.+++...+ .+++..+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||.+.............+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence 999987765 69999999999999999999999999999999999999 4567799999999876654433445578
Q ss_pred Cccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccC
Q 011647 233 SAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (480)
Q Consensus 233 t~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 311 (480)
+..|+|||++.+ .++.++||||||+++|+|++|..||...........+.......+....+.+++.+.++|.+||+.|
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence 889999998754 4788999999999999999999999776542222222222222222233467899999999999999
Q ss_pred cCCCC-----CHHHHhcCCcccc
Q 011647 312 PKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 312 p~~R~-----t~~~~l~h~~~~~ 329 (480)
|.+|| ++.++++||||+.
T Consensus 237 p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 237 PEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred hhHccCCCcccHHHHHhChhhhc
Confidence 99999 8999999999974
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=336.32 Aligned_cols=252 Identities=32% Similarity=0.554 Sum_probs=218.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||.|+||.||+|.+..++..||+|++.+.........+.+.+|+++++++. ||||+++++.+..+...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 4889999999999999999999999999999997655444456788999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~ 227 (480)
||+.|++|.+.+.....+++..+..++.||+.||.|||++|++|+||+|+||++ ++++.++|+|||++.........
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~ 156 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLT 156 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCccc
Confidence 999999999999887789999999999999999999999999999999999999 45677999999998876554444
Q ss_pred ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
....|+..|+|||++.. .++.++|+||||+++|+|++|..||..... ............. ..+.++.++.++
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 232 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL----YPATWSTEAIDA 232 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccccc----CcccCcHHHHHH
Confidence 55678899999998864 478999999999999999999999987663 3333222222222 224678999999
Q ss_pred HHHhcccCcCCCCCH--HHHhcCCcc
Q 011647 304 VKKMLHADPKERLSA--AEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~--~~~l~h~~~ 327 (480)
|.+||..||.+||++ .++++||||
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcCCCC
Confidence 999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=333.24 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=215.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||.|+||+||+|....++..+|+|++...... .....+.+|+++++.+. |+||+++++.+...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEE
Confidence 3689999999999999999999989999999998654322 25678999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 147 MDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||++++++|.+++... ..+++..+..++.|++.||.|||+.|++||||+|+||+++ +++.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccchHHHhcc
Confidence 9999999999998764 4589999999999999999999999999999999999994 466799999999876543
Q ss_pred CCc-----cccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC--CCC
Q 011647 224 GDV-----FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD--PWP 294 (480)
Q Consensus 224 ~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~ 294 (480)
... .....|+..|+|||++.. .++.++|+||||+++|+|++|..||...................... .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence 322 133468999999998754 47889999999999999999999998777665555554443221111 124
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.+++.+.+++.+||..||++||++.++++||||
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 678999999999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=329.71 Aligned_cols=252 Identities=25% Similarity=0.539 Sum_probs=213.3
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-CCeEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSVNLI 146 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv 146 (480)
.|++.+.||+|++|.||++.++.+++.||+|.+..... .....+.+.+|+.++++++ |||++++++.+.. ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEE
Confidence 48899999999999999999999999999999864332 3334567889999999998 9999999998764 4568999
Q ss_pred EecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||+++++|.+++... ..+++..+..++.|++.||.+||++|++||||||+||++ +.++.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEeccc
Confidence 9999999999988763 458999999999999999999999999999999999999 45677999999999866432
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......|++.|+|||++.+ .++.++||||||+++|+|++|+.||...+.......+..+.... ....+++++.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGE 232 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHH
Confidence 22334578999999998864 47889999999999999999999998877666666655544321 12467899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++.+||..+|++|||+.++++||||
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHhccCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=335.16 Aligned_cols=256 Identities=29% Similarity=0.497 Sum_probs=215.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|++.+.||.|+||.||+|.+..++..+++|.+... .....+.+.+|+++++.+. ||||+++++.+..++..++||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEE
Confidence 478889999999999999999999999999998543 2344577889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
||+.+++|..++.. .+.+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++...... .
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEcccccccccccccc
Confidence 99999999887765 45799999999999999999999999999999999999994 5667999999998764322 1
Q ss_pred ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 226 VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
......|++.|+|||++. ..++.++|||||||++|+|++|.+||...........+........ .....++.+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSSE 237 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-CCccccCHH
Confidence 223457899999999873 2367899999999999999999999988776666555544332211 112357899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.++|.+||..||.+||++.++++||||+...
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 99999999999999999999999999998753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=337.58 Aligned_cols=259 Identities=26% Similarity=0.409 Sum_probs=213.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||+|+||.||+|.+..++..||+|.+... ........+.+|+.+++++. ||||+++++.+...+.+++||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEEE
Confidence 588999999999999999999999999999988643 13334577889999999997 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 148 DLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 148 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||+++++|..++... ..+++..+..++.||+.||.|||+ .||+||||||+||+++ .++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCcccccC
Confidence 999999998887653 379999999999999999999997 5999999999999995 467799999999876532
Q ss_pred CCccccCCCCccccccccccc-------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
. ......|++.|+|||++.+ .++.++|+|||||++|+|++|..||...........+.......+....+.+
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd06622 156 S-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGY 234 (286)
T ss_pred C-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCccc
Confidence 2 2234568889999998743 2478999999999999999999999766554443332221111112223458
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
+.++.++|.+||..+|++||++.++++||||......
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 235 SDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 9999999999999999999999999999999876544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=344.09 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=203.6
Q ss_pred ecceeccc--CCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 71 FGRELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 71 ~~~~lG~G--~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
+++.||+| +|++||++.++.+|+.||+|.+..... .....+.+.+|+.+++.+. ||||+++++++..++..++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEe
Confidence 56789999 789999999999999999999865432 2334567888999999997 9999999999999999999999
Q ss_pred cCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 149 LCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 149 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|+++++|.+++... +.+++..++.++.|++.||.|||++||+||||||+|||++ .++.++++||+.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhccccccc
Confidence 99999999988653 4589999999999999999999999999999999999994 46679999998654322111
Q ss_pred -------ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC------
Q 011647 226 -------VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (480)
Q Consensus 226 -------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (480)
......++..|+|||++.+ .++.++|||||||++|+|++|..||..............+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112356778999999864 478999999999999999999999976554433333222211100
Q ss_pred ------------------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 290 ------------------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 290 ------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.+....+++++.+||.+||+.||++|||++++++||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 0011235678999999999999999999999999999974
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=347.15 Aligned_cols=252 Identities=24% Similarity=0.436 Sum_probs=210.7
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...+...++..||+|.||+||+|++.++ ||||++..... +.+..+.|++|+.++++-+ |.||+-+.+++..++.
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDP-TPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL 462 (678)
T ss_pred ccCHHHhhccceeccccccceeecccccc---eEEEEEecCCC-CHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce
Confidence 33445677889999999999999999765 99999976554 5558899999999999998 9999999999987777
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.||+.+|+|.+|+.++.-. ..|.....+.|++||++|+.|||.++|||||||..||++ .+++.|||+|||++..-
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVK 538 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeee
Confidence 9999999999999988643 458889999999999999999999999999999999999 56688999999998753
Q ss_pred C---CCCccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC-CCCC
Q 011647 222 K---PGDVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-SDPW 293 (480)
Q Consensus 222 ~---~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 293 (480)
. .........|...|||||+++. .|+..+||||||+++|||++|..||.......++-.+-++..... ....
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhh
Confidence 2 2233444568889999999863 489999999999999999999999996666666555555532221 1223
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...++++++|+..||..++++||...+||.
T Consensus 619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 456789999999999999999999999986
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=337.79 Aligned_cols=263 Identities=29% Similarity=0.489 Sum_probs=217.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
+...+|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++ ||||+++++++......
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 91 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEE
Confidence 345789999999999999999999999999999999864322 23467889999999997 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++.+ ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++.....
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred EEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEccC
Confidence 999999999999998754 468999999999999999999999999999999999999 4567799999999886543
Q ss_pred CCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
... .....|++.|+|||.+.+ .++.++|+|||||++|++++|..||.+.........+..... ........++..+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 246 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPERLSAVFR 246 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC-CCCCCccccCHHHH
Confidence 322 234578999999998864 478999999999999999999999987665333222222111 11112245788999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
+++.+||..+|++||++.++++||||+.......
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence 9999999999999999999999999987655443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-43 Score=334.57 Aligned_cols=250 Identities=24% Similarity=0.401 Sum_probs=207.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++++. ||||+++++.+...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEE
Confidence 5788899999999999999999999999999986432 2334467889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~ 227 (480)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||++...... ..
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~-~~ 150 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNS-IA 150 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceecccc-cc
Confidence 99999988543 3578999999999999999999999999999999999994 5677999999999865432 23
Q ss_pred ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-------QSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
....|+..|+|||++.+ .++.++|+||||+++|+|++|..||..... ......+..... +..+....+++
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 228 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVGQFSEK 228 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCCcCCHH
Confidence 44689999999998864 588999999999999999999999965321 122222222111 11123457889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.+++.+||+.+|++||++.++++||||+..
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 9999999999999999999999999999765
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=335.96 Aligned_cols=257 Identities=33% Similarity=0.512 Sum_probs=217.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||.|+||+||+|.+..++..||+|.+... .....+.+.+|+.+++++. ||||+++++.+..+...++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEE
Confidence 35799999999999999999999989999999998543 3344577889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||||+||++ +.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccc
Confidence 99999999999988764 569999999999999999999999999999999999999 45677999999998754322
Q ss_pred C-ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 D-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
. ......|++.|+|||++. ..++.++|+||||+++|+|++|..||...........+.....+.. .....++
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQPSKWS 235 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CCcccCC
Confidence 2 223456899999999874 2367789999999999999999999988776666655555433211 1123578
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.++.++|.+||+.+|.+||++.++++||||+..
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 236 SSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 999999999999999999999999999999855
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=331.82 Aligned_cols=250 Identities=33% Similarity=0.613 Sum_probs=214.5
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++++. ||||+++++.+.++..+++||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 799999999999999999999999997655444455678999999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCc
Q 011647 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234 (480)
Q Consensus 155 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~ 234 (480)
|.+++.+...+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++.............|++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccccccccCCc
Confidence 999998888899999999999999999999999999999999999994 46779999999998765443334457899
Q ss_pred cccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccC
Q 011647 235 YYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (480)
Q Consensus 235 ~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 311 (480)
.|+|||.+.+ .++.++|+||+|+++|+|++|..||.... .......+..+......+ ...++++.++|.+||..+
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~ 234 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLRRN 234 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHccCC
Confidence 9999998754 58899999999999999999999998776 555555555322222211 235889999999999999
Q ss_pred cCCCCC-----HHHHhcCCccccc
Q 011647 312 PKERLS-----AAEVLNHPWMRVD 330 (480)
Q Consensus 312 p~~R~t-----~~~~l~h~~~~~~ 330 (480)
|++||+ +.|+++||||+..
T Consensus 235 p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 235 PEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred hhhCcCCcccCHHHHhcChhhhCC
Confidence 999999 9999999999853
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=331.42 Aligned_cols=254 Identities=27% Similarity=0.456 Sum_probs=211.3
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEeccccc---CChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+|++++.||+|+||+||+|... +++.+|+|.+..... ........+.+|+.++++++ |+||+++++++.+...++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence 4788999999999999999874 688999998864321 11233467889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~- 223 (480)
+||||+++++|.+++.+.+.+++..+..++.|++.||.|||+.||+|+||+|+||++. .++.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhhHhhhhc
Confidence 9999999999999998888899999999999999999999999999999999999994 567799999999875421
Q ss_pred ------CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 224 ------GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 224 ------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
........|+..|+|||++.+ .++.++||||||+++|+|++|..||...........+.......+. ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 234 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR-LPDSF 234 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC-CCCCC
Confidence 112234568999999999865 4789999999999999999999999876654444333332221211 22467
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+.++.++|.+||+.+|++||++.++++||||
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 8999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=336.04 Aligned_cols=258 Identities=28% Similarity=0.511 Sum_probs=217.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
..+|.+.+.||.|+||+||+|.+..+++.||+|.+.... ....+.+.+|+.+++.+. ||||+++++++.....+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEE
Confidence 357999999999999999999999999999999986432 233567889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|+||+.+++|..++.. ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 94 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhccccc
Confidence 9999999999887754 468999999999999999999999999999999999999 456779999999987654332
Q ss_pred c-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
. .....|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+...... .......+++.+.++
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 248 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSPIFRDF 248 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCCHHHHHH
Confidence 2 234578899999998864 4889999999999999999999999887765544444333221 122234688999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|.+||..||++|||+.++++||||+....
T Consensus 249 i~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 249 LNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 99999999999999999999999986543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-43 Score=334.94 Aligned_cols=241 Identities=18% Similarity=0.248 Sum_probs=206.2
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----CCeEEEEEe
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RHSVNLIMD 148 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----~~~~~lv~e 148 (480)
..||+|++|.||+|.. +|+.||||.+...........+.+.+|+.++.++. ||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence 5789999999999998 57899999987654333333577889999999998 9999999999876 457899999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~ 227 (480)
|+++|+|.+++...+.+++.....++.|++.||.|||+. +++||||||+|||+ +.++.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc--
Confidence 999999999998888899999999999999999999984 99999999999999 456789999999988653322
Q ss_pred ccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 228 KDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
....|++.|+|||++.+ .++.++|||||||++|||++|..||.+.+..+....+......++.+ ...++++.+++
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li 255 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIV 255 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHH
Confidence 34578999999999864 58999999999999999999999999888877777775554433322 25789999999
Q ss_pred HHhcccCcCCCCCHHHHhc
Q 011647 305 KKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~ 323 (480)
.+||+.||++|||+.++++
T Consensus 256 ~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 256 EACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHhcCCcccCcCHHHHHH
Confidence 9999999999999999985
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-43 Score=328.80 Aligned_cols=253 Identities=25% Similarity=0.454 Sum_probs=217.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.+..+++.+|+|.+..... .......+.+|+.++++++ ||||+++++.+..++..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEE
Confidence 48899999999999999999999999999999875433 3344678999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++++|.+++... ..+++..+..++.|++.+|.|||++|++|+||||+||+++. .+..+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccCCCceecCCCc
Confidence 999999999998764 34899999999999999999999999999999999999953 34568999999998765544
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|+..|+|||.+.+ .++.++||||||+++|+|++|..||...+.......+....... ....++.++.+++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 233 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLI 233 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHH
Confidence 4445678999999999865 47889999999999999999999998877766666655543221 1235789999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcc
Q 011647 305 KKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.+||..+|++|||+.++++||||
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=331.86 Aligned_cols=264 Identities=26% Similarity=0.434 Sum_probs=214.4
Q ss_pred CcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC-CC----CeeEEE
Q 011647 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-HR----NIVELK 134 (480)
Q Consensus 60 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-hp----~iv~~~ 134 (480)
...+.+..+|.+.+.+|+|.||.|..+.+..++..||||+++.-. ...+..+-|+++|+++.. -| -+|++.
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 445567899999999999999999999999999999999986432 223667789999999952 23 378899
Q ss_pred EEEEeCCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-------
Q 011647 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA------- 205 (480)
Q Consensus 135 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~------- 205 (480)
+||+..++.|||+|.+ |.++++++..++ +++...++.+++|+++++++||+.+++|.||||+|||+.+..
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEecc
Confidence 9999999999999999 779999998764 589999999999999999999999999999999999997421
Q ss_pred ----------CCCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 011647 206 ----------EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE 274 (480)
Q Consensus 206 ----------~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~ 274 (480)
....|+|+|||.|..... .....+.|..|.|||++.+ +++.++||||+||||+||++|...|++.++
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 245699999999987543 3367789999999998865 799999999999999999999999998886
Q ss_pred HHHH---HHHHc------------------CCCcCCCCCCC------------------CC---CHHHHHHHHHhcccCc
Q 011647 275 QSIF---DAILR------------------GHIDFSSDPWP------------------NI---SSSAKDIVKKMLHADP 312 (480)
Q Consensus 275 ~~~~---~~~~~------------------~~~~~~~~~~~------------------~~---~~~~~~li~~~L~~dp 312 (480)
.+.+ +.|+. +...++....+ .. -..+.+||++||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 6633 33321 11111111000 00 1347799999999999
Q ss_pred CCCCCHHHHhcCCccccc
Q 011647 313 KERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 313 ~~R~t~~~~l~h~~~~~~ 330 (480)
.+|+|+.|+|.||||...
T Consensus 395 ~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 395 ARRITLREALSHPFFARL 412 (415)
T ss_pred cccccHHHHhcCHHhhcC
Confidence 999999999999999854
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=333.98 Aligned_cols=252 Identities=27% Similarity=0.421 Sum_probs=200.7
Q ss_pred eecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHc--cCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL--TGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
.||+|+||.||++.+..+++.||+|.+.+.............+|..+++.+ .+||||+.+++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998754432222223344454443333 249999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCC
Q 011647 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231 (480)
Q Consensus 152 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~ 231 (480)
+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.++|+|||++....... .....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccC-ccCcC
Confidence 99999999888889999999999999999999999999999999999999 456779999999987653322 23357
Q ss_pred CCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcc
Q 011647 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (480)
Q Consensus 232 gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (480)
|++.|+|||.+.+ .++.++||||+||++|+|++|..||......... .+............+.++.++.++|.+||.
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence 8999999998753 4789999999999999999999999754321111 111111112222234688999999999999
Q ss_pred cCcCCCC-----CHHHHhcCCccccc
Q 011647 310 ADPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 310 ~dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
.||.+|+ |+.++++||||+..
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhCccccCC
Confidence 9999999 69999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-43 Score=337.46 Aligned_cols=261 Identities=28% Similarity=0.475 Sum_probs=214.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
+|.+.+.||+|+||.||+|.+..+++.||||.+...... .......+..|+.++++++ ||||+++++++.+.+..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488899999999999999999999999999999754432 1222356778999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++......
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeeeeccCC
Confidence 99999 889999998766 799999999999999999999999999999999999994 5677999999999876443
Q ss_pred -CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC------------
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------------ 289 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~------------ 289 (480)
.......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+......+..+........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 22334467889999998753 478899999999999999999888887766554444432110000
Q ss_pred ------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 290 ------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 290 ------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
...+...+.++.++|.+||.+||++|||+.++|+||||+....+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 00123457889999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=326.26 Aligned_cols=252 Identities=29% Similarity=0.519 Sum_probs=219.1
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||.|+||.||.+++..+++.+++|.+..... .......+.+|+.+++++. |+||+++++++.+.+.+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEE
Confidence 58999999999999999999999999999999864432 3344567889999999997 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++ +++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEccccc
Confidence 999999999998765 4689999999999999999999999999999999999994 56679999999998764333
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||......+....+..+...... ..++.++.++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---SVYSSELISL 232 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2344678999999998865 4788999999999999999999999888877777777665443222 5678999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
|.+||..+|.+||++.++|+|||+
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-43 Score=334.96 Aligned_cols=255 Identities=31% Similarity=0.553 Sum_probs=212.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++++. ||||+++++++..+..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 48899999999999999999999999999999865432 2233467899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
||+ +++|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccccCCCC
Confidence 999 9999998865 45699999999999999999999999999999999999994 46779999999988764332
Q ss_pred -ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC----------------
Q 011647 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~---------------- 286 (480)
......|+..|+|||++.+ .++.++||||+|+++|+|++|.+||.+......+..+.....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2344578999999998753 368899999999999999999888887766555444332110
Q ss_pred ---cCCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 287 ---DFSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 287 ---~~~~-------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.++. ..++..+.++.++|.+||..+|++|||++++|+||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0110 01235678999999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=332.51 Aligned_cols=258 Identities=27% Similarity=0.499 Sum_probs=211.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC---hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN---RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+|+.++.||+|+||.||+|.+..+++.||+|++....... ....+.+.+|++++++++ ||||+++++++.+.+.++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 4788899999999999999999999999999986433211 123577899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||++|++|.+++...+.+++..+..++.||+.||.|||++|++|+||||+||+++. .+..++|+|||++......
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEcccccccccccc
Confidence 99999999999999988888999999999999999999999999999999999999953 2346999999998765432
Q ss_pred C-----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC-CcCCCCCCCCCC
Q 011647 225 D-----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-IDFSSDPWPNIS 297 (480)
Q Consensus 225 ~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 297 (480)
. ......|+..|+|||++.+ .++.++|+||||+++|+|++|..||...........+.... ........+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 1 1123468899999998864 57889999999999999999999997544322222221111 111112223578
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
+++.+++.+||..+|.+||++.++++||||+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 9999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=339.98 Aligned_cols=249 Identities=27% Similarity=0.480 Sum_probs=192.3
Q ss_pred cceecccCCeEEEEEEEcC--CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE--eCCeEEEEE
Q 011647 72 GRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DRHSVNLIM 147 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--~~~~~~lv~ 147 (480)
+.+||+|+||+||+|.++. ++..||+|.+.... ....+.+|+.+++++. ||||+++++++. .+..+++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEE
Confidence 4689999999999999754 56889999886432 2245788999999998 999999999884 456789999
Q ss_pred ecCCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC-CCCCCeeEeeccc
Q 011647 148 DLCAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AEDSPLKATDFGL 217 (480)
Q Consensus 148 e~~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~ikl~Dfg~ 217 (480)
||+.+ +|.+.+... ..+++..++.++.||+.||.|||+.||+||||||+|||+... +.++.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99964 777776421 248899999999999999999999999999999999999543 3467899999999
Q ss_pred ceecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHH
Q 011647 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------SIFDAIL 282 (480)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~---------~~~~~~~ 282 (480)
++...... ......||+.|+|||++.+ .++.++|||||||++|+|+||.+||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 98754322 2234578999999998854 4789999999999999999999999754321 1111110
Q ss_pred cCC--------------CcCC--------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 283 RGH--------------IDFS--------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 283 ~~~--------------~~~~--------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
... ..++ .......+..+.+||.+||..||.+|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000 0000 00011235678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=329.09 Aligned_cols=254 Identities=28% Similarity=0.497 Sum_probs=208.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--CCeE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSV 143 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~~~~ 143 (480)
.|.+.+.||+|+||.||+|.+..++..||+|.+...... .......+.+|+.++++++ ||||+++++++.+ ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEE
Confidence 588999999999999999999999999999988644321 2234567889999999998 9999999998865 3678
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+++|||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||+++ .++.++|+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCCCcccccc
Confidence 89999999999999998888899999999999999999999999999999999999994 566799999999876432
Q ss_pred C----CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 224 G----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 224 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
. .......|+..|+|||.+.+ .++.++||||+||++|+|++|+.||...........+...... ......+++
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN--PQLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC--CCCchhcCH
Confidence 1 11223568899999998865 4788999999999999999999999876554444433322211 111134678
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.+.+++ +||..+|++||+++++++||||+
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 899999 67778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=336.95 Aligned_cols=256 Identities=27% Similarity=0.495 Sum_probs=211.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+.+|+++++.+. ||||+++++++..+...++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEE
Confidence 368999999999999999999998999999999865432 2233467889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
|||+.+++|..+......+++..+..++.||+.||.|||+.|++|+||+|+||++ ++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCcc
Confidence 9999998888877666679999999999999999999999999999999999999 45677999999998875433 2
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc----------------
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID---------------- 287 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~---------------- 287 (480)
......++..|+|||++.+ .++.++||||||+++|+|++|.+||......+....+......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 2334568899999998754 3678999999999999999999999776654433332211000
Q ss_pred ---CCC--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 ---FSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 ---~~~--------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.+. ..++.++..+.+++.+||..+|++||++.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000 1134678999999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=335.18 Aligned_cols=258 Identities=28% Similarity=0.425 Sum_probs=208.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe----
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS---- 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~---- 142 (480)
++|++.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.+++++.+||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 368999999999999999999999999999998765322 222346688899999999868999999999877665
Q ss_pred -EEEEEecCCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 143 -VNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 143 -~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
.|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. .++.+||+|||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg 156 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLG 156 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--CCCeEEEeecc
Confidence 8999999976 788877643 35799999999999999999999999999999999999953 26789999999
Q ss_pred cceecCCC-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC-----
Q 011647 217 LSVFFKPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF----- 288 (480)
Q Consensus 217 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~----- 288 (480)
++...... .......+++.|+|||++.+ .++.++||||||+++|+|++|..||.+.+.......+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 98865322 12233467889999998753 47889999999999999999999998876655443332211000
Q ss_pred -------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 289 -------------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 289 -------------------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.....+.+++++.++|.+||.+||.+||++.++|.||||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 0001245789999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-43 Score=333.34 Aligned_cols=254 Identities=26% Similarity=0.458 Sum_probs=209.3
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE------
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE------ 138 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~------ 138 (480)
..+.|++.+.||.|+||.||+|.+..+++.||+|++... ......+..|+.+++++.+||||+++++++.
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 446799999999999999999999999999999997543 2234668899999999967999999999884
Q ss_pred eCCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
....+++||||+.+++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg 166 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFG 166 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCc
Confidence 346789999999999999988653 4588999999999999999999999999999999999994 56779999999
Q ss_pred cceecCCC-CccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 217 LSVFFKPG-DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 217 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
++...... .......|++.|+|||++. ..++.++|||||||++|+|++|..||...........+..... +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~ 244 (282)
T cd06636 167 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--P 244 (282)
T ss_pred chhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--C
Confidence 98764322 2233457899999999874 2477899999999999999999999977665444433332211 1
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
......++.++.++|.+||+.||.+|||+.++|+||||
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 11223578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=332.59 Aligned_cols=257 Identities=25% Similarity=0.418 Sum_probs=211.5
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
...++|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++.+|||++++++++...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 34678999999999999999999999999999999986432 22356788999999996699999999988643
Q ss_pred --CeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 141 --HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
+.+++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+||+++ .++.+||+|
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~d 171 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVD 171 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEee
Confidence 468999999999999987753 45689999999999999999999999999999999999994 466799999
Q ss_pred cccceecCCCC-ccccCCCCccccccccccc------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc
Q 011647 215 FGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (480)
Q Consensus 215 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 287 (480)
||++....... ......|+..|+|||++.. .++.++|||||||++|+|++|+.||...........+......
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~ 251 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPP 251 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCC
Confidence 99988654322 2234568899999998743 2578999999999999999999999877665555554443221
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
. ......++..+.++|.+||+.+|++||++.++++||||+
T Consensus 252 ~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 252 T-LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred C-CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 1 111235678899999999999999999999999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=330.25 Aligned_cols=249 Identities=27% Similarity=0.460 Sum_probs=200.9
Q ss_pred ccceeeccee--cccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 66 RNTYIFGREL--GRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 66 ~~~y~~~~~l--G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.|.+.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.....+.+||||+++++.+...+.+
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3456776666 99999999999999999999999986543211 1222222233599999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++...+.+++..+..++.||+.||.|||+.|++||||||+||++..+ .+.++|+|||++.....
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccceecCC
Confidence 9999999999999999888899999999999999999999999999999999999999532 22799999999876543
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIF-DAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
. ....|+..|+|||++.+ .++.++||||+|+++|+|++|..||......... ....... ......++.+++.+.
T Consensus 163 ~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (267)
T PHA03390 163 P---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNAN 238 (267)
T ss_pred C---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHH
Confidence 2 23468999999999864 5888999999999999999999999865443221 1111111 222233346899999
Q ss_pred HHHHHhcccCcCCCCC-HHHHhcCCccc
Q 011647 302 DIVKKMLHADPKERLS-AAEVLNHPWMR 328 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t-~~~~l~h~~~~ 328 (480)
++|.+||+++|.+||+ ++++|+||||+
T Consensus 239 ~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 239 DFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred HHHHHHhccChhhCCchHHHHhcCCccc
Confidence 9999999999999996 69999999997
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=331.34 Aligned_cols=255 Identities=26% Similarity=0.473 Sum_probs=215.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|...+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++++. ||||+++++.+.++...++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEE
Confidence 46888899999999999999999999999999986432 2344577899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|||++|++|.+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccceeccCCcc
Confidence 999999999988754 5799999999999999999999999999999999999994 566799999999976543322
Q ss_pred -cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 227 -FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 227 -~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
.....++..|+|||++.+ .++.++|+|||||++|+|++|..||...........+..... ......++..+.+++
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li 233 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEFI 233 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHHH
Confidence 233468889999998864 478899999999999999999999987776555544433221 112235678899999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+||..+|++||++.++++|+||....
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHcccCcccCcCHHHHHhChHhhhcc
Confidence 999999999999999999999997543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=330.02 Aligned_cols=256 Identities=27% Similarity=0.482 Sum_probs=212.3
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC-------hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-------RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
+|.+.+.||.|+||.||+|.+..+++.||+|.+....... ....+.+.+|+.+++++. ||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 5888999999999999999999999999999885322111 112356888999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+..++||||+.+++|.+++...+.+++..+..++.||+.||.|||++|++||||+|+||++ +.++.++|+|||++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence 9999999999999999999888889999999999999999999999999999999999999 4567899999999876
Q ss_pred cCCCC---ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC--CCcCCCCC
Q 011647 221 FKPGD---VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDP 292 (480)
Q Consensus 221 ~~~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~--~~~~~~~~ 292 (480)
..... ......|+..|+|||.+.. .++.++|+||||+++|++++|..||...........+... ...++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV 237 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccc
Confidence 43211 1233468899999998753 3688999999999999999999999765544333333222 22233333
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.+.++.++.++|.+||.++|++|||++++|+||||
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 45678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=332.79 Aligned_cols=252 Identities=29% Similarity=0.497 Sum_probs=206.4
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--CeEEEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVNLI 146 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~~~lv 146 (480)
|++.+.||+|+||.||+|.+..+++.||+|.+..... ... .....+|+.++.++.+||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6788999999999999999999999999999865321 212 233457889999997799999999999887 899999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+.+ +|.+.+.. ...+++..+..++.|++.||.|||++|++||||||+||+++ . +.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCC
Confidence 999964 78787765 35689999999999999999999999999999999999995 3 789999999998765444
Q ss_pred ccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC------------------
Q 011647 226 VFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------------------ 285 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~------------------ 285 (480)
......+++.|+|||++. +.++.++|||||||++|+|++|..||.+.+..+....+....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 445567899999999764 346889999999999999999999998877655444432211
Q ss_pred CcCCCC-------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 286 IDFSSD-------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 286 ~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
..++.. ..+.++.++.++|.+||.++|++|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 001100 013568999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=336.28 Aligned_cols=263 Identities=27% Similarity=0.418 Sum_probs=213.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--CeE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSV 143 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~~ 143 (480)
.++|.+.+.||+|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++++. |+||+++++++... +.+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeE
Confidence 3579999999999999999999999999999999864332 1122234668999999998 99999999998754 568
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+.+ +|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||++ +.++.+||+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecC
Confidence 999999965 88887765 3569999999999999999999999999999999999999 456779999999998765
Q ss_pred CCC-ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-------------
Q 011647 223 PGD-VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI------------- 286 (480)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~------------- 286 (480)
... ......+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 332 2233456788999998854 478999999999999999999999998887776665543211
Q ss_pred ------cCCCCC-------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 287 ------DFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 287 ------~~~~~~-------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
.....+ +..+++++.++|.+||..||++|||+.++++||||+...-+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~ 300 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPC 300 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCC
Confidence 001111 123588899999999999999999999999999998655443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=327.04 Aligned_cols=251 Identities=28% Similarity=0.481 Sum_probs=212.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ..+.+.+|+.+++++. ||||+++++.+.+...+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEE
Confidence 57999999999999999999999889999999986432 1578999999999996 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
+||+.+++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcccCc
Confidence 999999999998875 45689999999999999999999999999999999999994 56679999999988765433
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|+..|+|||++.+ .++.++||||||+++|+|++|..||...........+...... .......++.++.++
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 232 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TLSDPEKWSPEFNDF 232 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CCCchhhcCHHHHHH
Confidence 2234568899999998865 4788999999999999999999999876655444333222111 111123567899999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
|.+||+.||++|||+.++|+||||
T Consensus 233 i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 233 VKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=326.01 Aligned_cols=252 Identities=25% Similarity=0.556 Sum_probs=216.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++++. ||||+++++++...+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEE
Confidence 58899999999999999999999999999999865332 2334567899999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+.+++|.+.+.... .+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccceeecCcch
Confidence 9999999999887643 589999999999999999999999999999999999994 46679999999998654332
Q ss_pred c-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
. .....|++.|+|||++.+ .++.++|+|||||++|+|++|..||......+....+..+..... ...++.++.++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 232 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNL 232 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC---cccCCHHHHHH
Confidence 2 223468899999998864 478899999999999999999999988877777777665543221 24678999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
|.+||+.+|.+||++.++++||||
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=326.66 Aligned_cols=254 Identities=30% Similarity=0.518 Sum_probs=214.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||.|+||.||+|.+..+++.+|+|++.... ....+.+.+|+.+++++. ||||+++++.+.....+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEE
Confidence 357999999999999999999999999999999986432 235678999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||+.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++......
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhhhhh
Confidence 99999999999988776 7899999999999999999999999999999999999994 5677999999998765432
Q ss_pred C-ccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC-CCCCCCCH
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISS 298 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 298 (480)
. ......|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...........+.......+. .....++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhH
Confidence 2 2234578899999998753 4788999999999999999999999887765555444443222111 11234678
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
++.+++.+||..+|.+|||+.+++.|+|
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 8999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=326.72 Aligned_cols=255 Identities=29% Similarity=0.498 Sum_probs=210.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEeccccc--CChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--Ce
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~ 142 (480)
..|.+.+.||+|+||.||+|.+..+++.||||.+..... ......+.+.+|+.+++++. ||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCce
Confidence 468999999999999999999999999999998854321 12234578899999999998 99999999988763 56
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++||||+++++|.+++.+.+.+++..+..++.|++.||.|||++||+|+||||+||++ +.++.++|+|||++....
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccccc
Confidence 88999999999999999887889999999999999999999999999999999999999 456779999999987643
Q ss_pred CC----CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PG----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. .......|+..|+|||++.+ .++.++|||||||++|+|++|+.||...........+...... ....+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 235 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PVLPPHVS 235 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC--CCCchhhC
Confidence 21 11233568899999998854 5788999999999999999999999876555444443332211 11123577
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
..+.++|.+||. +|++||+++++++|||+.
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 889999999995 999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=331.98 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=209.2
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE---
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--- 138 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--- 138 (480)
.....++|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++.+||||+++++++.
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3445678999999999999999999999999999999875422 123567889999999966999999999873
Q ss_pred --eCCeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 139 --DRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 139 --~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
.++.+++||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+||+++ .++.++|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEE
Confidence 45678999999999999887652 35689999999999999999999999999999999999994 4566999
Q ss_pred eecccceecCCCC-ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC
Q 011647 213 TDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285 (480)
Q Consensus 213 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 285 (480)
+|||++....... ......|++.|+|||++. ..++.++||||+||++|+|++|..||...........+....
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 245 (286)
T cd06638 166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP 245 (286)
T ss_pred ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC
Confidence 9999988654322 223456899999999874 237889999999999999999999998766544433332221
Q ss_pred CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.. .......++.++.++|.+||+.||++|||+.++++|+||
T Consensus 246 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 246 PP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 11 111112457889999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-42 Score=326.04 Aligned_cols=254 Identities=28% Similarity=0.507 Sum_probs=214.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+.+|+.++++++ |+||+++++.+...+.+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEE
Confidence 58899999999999999999998999999999875433 2346688999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc-
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV- 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~- 226 (480)
||+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCCCc
Confidence 9999999999998877899999999999999999999999999999999999994 467799999999887643322
Q ss_pred ----cccCCCCcccccccccccc----CCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCC
Q 011647 227 ----FKDLVGSAYYVAPEVLRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 227 ----~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.....+++.|+|||++.+. .+.++||||||+++|++++|..||...... .....+.. ......+.+..++
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLS 234 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccC
Confidence 1235678899999988642 688999999999999999999999765332 22222222 2222223334568
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
..+.++|.+||+.+|++|||+.+++.|||+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=356.60 Aligned_cols=263 Identities=22% Similarity=0.308 Sum_probs=194.8
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCC-ceEEEE--------------EecccccCChhcHHHHHHHHHHHHHccCC
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTK-QQFACK--------------SISSRKLINRDDVEDVRREVQIMHHLTGH 127 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~vavK--------------~~~~~~~~~~~~~~~~~~e~~~l~~l~~h 127 (480)
..+..+|++++.||+|+||+||+|..+... ..+++| .+.+...........+.+|+.+++++. |
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-H 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-C
Confidence 345678999999999999999998765332 222222 111111112233466889999999998 9
Q ss_pred CCeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecc
Q 011647 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (480)
Q Consensus 128 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 202 (480)
|||+++++++...+..|+|++++. ++|.+++... .......++.++.||+.||.|||++|||||||||+|||+
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl- 300 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL- 300 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-
Confidence 999999999999999999999994 5777776542 224466788999999999999999999999999999999
Q ss_pred cCCCCCCeeEeecccceecCCCCc--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCC-CC--hHH
Q 011647 203 SSAEDSPLKATDFGLSVFFKPGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWG-ET--EQS 276 (480)
Q Consensus 203 ~~~~~~~ikl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~-~~--~~~ 276 (480)
+.++.+||+|||++..+..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..++.. .. ...
T Consensus 301 --~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 301 --NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred --CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 4567799999999987654322 234679999999999865 589999999999999999998765432 21 212
Q ss_pred HHHHHHcCC----CcCCCC------------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 277 IFDAILRGH----IDFSSD------------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 277 ~~~~~~~~~----~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.+..+.... ..++.. ....++.++.++|.+||+.||.+|||+.|+|.||||.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 222211100 001000 0013567788899999999999999999999999997
Q ss_pred cc
Q 011647 329 VD 330 (480)
Q Consensus 329 ~~ 330 (480)
..
T Consensus 459 ~~ 460 (501)
T PHA03210 459 AE 460 (501)
T ss_pred cC
Confidence 54
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=343.21 Aligned_cols=261 Identities=30% Similarity=0.446 Sum_probs=210.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+.++|.+.+.||+|+||+||+|.+..+++.||||.+.... ........+.+|+.+++++. ||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCcc
Confidence 5578999999999999999999999999999999986432 23334567788999999998 99999999988643
Q ss_pred --CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 --HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
...|+||||+. ++|.+.+... +++..+..++.|++.||+|||++||+||||||+||++ +.++.+||+|||++
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccc
Confidence 35799999995 4888877644 8999999999999999999999999999999999999 45677999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC------------
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------------ 285 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~------------ 285 (480)
.............|++.|+|||++.+ .++.++|||||||++|+|++|+.||...+.......+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQ 245 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 87654444445678999999998864 58999999999999999999999998766443333322100
Q ss_pred ----------CcCC---------CC--------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 286 ----------IDFS---------SD--------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 286 ----------~~~~---------~~--------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
.... .. .....++.++++|.+||+.||++|||+.++|+||||+.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~ 320 (353)
T cd07850 246 PTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDP 320 (353)
T ss_pred hhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCC
Confidence 0000 00 011346678999999999999999999999999999865443
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=324.63 Aligned_cols=254 Identities=30% Similarity=0.494 Sum_probs=215.3
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEeccccc--CChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
+|+..+.||+|+||+||+|....++..|++|.+..... ......+.+.+|+.+++.+. ||||+++++++..+..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 47788999999999999999998899999999864322 12334577899999999997 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++.+.+.+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.+||+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccceeccccc
Confidence 999999999999998888899999999999999999999999999999999999994 56789999999988765443
Q ss_pred ccccCCCCccccccccccc-c-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|++.|+|||.+.. . ++.++|+||||+++|+|++|..||...........+..... . ....+.+++++.++
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l 234 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-L-PPIPDHLSDEAKDF 234 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-C-CCcCCCcCHHHHHH
Confidence 3445678999999998753 3 78899999999999999999999977665444444333111 1 11224678999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+.+||+.+|.+||++.+++.|||+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=345.59 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=202.7
Q ss_pred ccceeecceecccCCeEEEEEEE-----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.++|++++.||+|+||+||+|.+ ..++..||||++.... .....+.+.+|+.++..+..||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45799999999999999999974 3456789999986433 2234567889999999995599999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcC---------------------------------------------------------
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKG--------------------------------------------------------- 163 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~--------------------------------------------------------- 163 (480)
+..++|||||++|+|.+++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999998886432
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 164 ------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 164 ------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcc
Confidence 477888999999999999999999999999999999994 46679999999998654332
Q ss_pred cc---ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 226 VF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 226 ~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.. ....++..|+|||++.+ .++.++|||||||++|+|++ |..||...... .....+..+. .... ....+.+
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~ 345 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY-RMLS--PECAPSE 345 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc-cCCC--CCCCCHH
Confidence 11 12234567999998864 58999999999999999998 89999776543 3333333332 1111 2346789
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.+|+.+||+.||++|||+.++++.
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=331.90 Aligned_cols=257 Identities=28% Similarity=0.494 Sum_probs=214.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
...+|.+.+.||+|+||+||+|.+..+++.||+|.+...........+.+.+|+.+++.+. ||||+++++++.+++..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEE
Confidence 3467999999999999999999999999999999986544444445567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+.| +|.+.+.. .+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.++|+|||++.....
T Consensus 92 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCC
Confidence 99999964 67666653 4579999999999999999999999999999999999999 4567799999999876543
Q ss_pred CCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
. ....|++.|+|||++. +.++.++||||||+++|+|++|..||.+.........+..... +......++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (307)
T cd06607 168 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLSSNDWSDY 242 (307)
T ss_pred C---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC--CCCCchhhCHH
Confidence 2 3456889999999873 3478899999999999999999999988776555444433221 11112346789
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.++|.+||..+|++||++.+++.||||....
T Consensus 243 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 243 FRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999999999999999999998654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-43 Score=335.60 Aligned_cols=261 Identities=30% Similarity=0.535 Sum_probs=217.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..+.|.....||+|+||.||++.+..++..||||.+... .....+.+.+|+.+++.+. ||||+++++.+...+..+
T Consensus 20 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 20 PREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELW 95 (292)
T ss_pred hHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEE
Confidence 345566678899999999999999999999999988542 2234567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.++|+|||++......
T Consensus 96 lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 96 VVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred EEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhcccc
Confidence 9999999999988774 4579999999999999999999999999999999999999 45677999999998754322
Q ss_pred C-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. ......|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+..... ........++..+.+
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 250 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP-PRVKDSHKVSSVLRG 250 (292)
T ss_pred cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CccccccccCHHHHH
Confidence 2 2234568999999998864 588899999999999999999999988777665555443322 111122357889999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
++.+||..||.+|||++++++||||+....++
T Consensus 251 li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 251 FLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred HHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 99999999999999999999999999776655
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-42 Score=328.56 Aligned_cols=256 Identities=30% Similarity=0.531 Sum_probs=214.1
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEEeCCeEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~~~~~~l 145 (480)
.|.+.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|+.+++++. .|||++++++++..+...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4788899999999999999999999999999986432 2344567889999999986 59999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCCCc
Confidence 9999999999988755 5799999999999999999999999999999999999994 46779999999998765433
Q ss_pred -ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...........+.... .+.-....++.++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 233 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLLRE 233 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHHHH
Confidence 2234578999999998754 36889999999999999999999998766554443332221 111112237889999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
++.+||..||++||++.++++|+||+...
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 99999999999999999999999997654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=328.23 Aligned_cols=255 Identities=27% Similarity=0.477 Sum_probs=210.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC---
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--- 141 (480)
..++|.+.+.||.|++|.||+|.++.+++.+++|++.... ...+.+.+|+.+++++.+||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 3478999999999999999999999889999999986432 234678999999999966999999999997644
Q ss_pred ---eEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 142 ---SVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 142 ---~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
.+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECC
Confidence 48999999999999988764 35799999999999999999999999999999999999994 567799999
Q ss_pred cccceecCCCC-ccccCCCCccccccccccc------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc
Q 011647 215 FGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (480)
Q Consensus 215 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 287 (480)
||++....... ......|++.|+|||++.. .++.++||||||+++|+|++|..||...........+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 99987654322 2234568999999998742 3677899999999999999999999876555544444443221
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
. ......++.+++++|.+||..||++|||+.++++|||+
T Consensus 237 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 T-LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred C-CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 1 11112367899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=332.05 Aligned_cols=254 Identities=29% Similarity=0.468 Sum_probs=207.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|++.+.||.|++|.||+|.+..+++.||||.+..... .......+.+|++++++++ ||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEe
Confidence 38889999999999999999999999999998864322 2233467889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+. ++|.+++.. .+.+++..+..++.|++.||+|||+.|++|+||+|+||++ +.++.+||+|||++.......
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCc
Confidence 9995 588888765 3568999999999999999999999999999999999999 456779999999987654322
Q ss_pred -ccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc---------------
Q 011647 226 -VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------------- 287 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~--------------- 287 (480)
......+++.|+|||++.+. ++.++||||||+++|+|+||..||.+.........+......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 22334678899999987643 588899999999999999999999877654443332221100
Q ss_pred ---CC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 ---FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 ---~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++ ....+.++++++++|.+||+.||.+|||++++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00 00123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=325.03 Aligned_cols=252 Identities=29% Similarity=0.517 Sum_probs=215.5
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE--eCCeEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DRHSVNL 145 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--~~~~~~l 145 (480)
+|.+.+.||.|+||.||+|.+..++..||+|.+..... .....+.+.+|+.++++++ ||||+++++.+. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 48889999999999999999999999999999865433 3445577889999999998 999999999775 3456899
Q ss_pred EEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 146 IMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCH-----SMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH-----~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
+|||+++++|.+++.. ...+++..++.++.||+.||.||| +.+++|+||||+||+++ .++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccc
Confidence 9999999999998865 357999999999999999999999 89999999999999994 56789999999
Q ss_pred cceecCCCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 217 LSVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 217 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
++........ .....|++.|+|||++.+ .++.++|+||||+++|+|++|..||...........+..+.... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~ 232 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR---IPY 232 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC---Ccc
Confidence 9987654433 344578999999998864 47889999999999999999999998887766666666554321 123
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.++..+.+++.+||..+|.+||++.++++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 678999999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=345.01 Aligned_cols=251 Identities=25% Similarity=0.397 Sum_probs=203.0
Q ss_pred ccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.++|.+++.||+|+||.||+|.+..+ +..||+|++.... .....+.+.+|+.+++.+..||||+++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 46799999999999999999986543 3579999986543 2234567889999999995599999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc----------------------------------------------------------
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK---------------------------------------------------------- 162 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~---------------------------------------------------------- 162 (480)
+.+++|||||++|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999988542
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc---
Q 011647 163 ------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (480)
Q Consensus 163 ------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~--- 227 (480)
.++++..+..++.||+.||.|||++||+||||||+|||++ +++.+||+|||++.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeec
Confidence 2478889999999999999999999999999999999994 5677999999999865432211
Q ss_pred ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 228 KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
....+++.|+|||++. ..++.++|||||||++|+|++ |..||..................... ...+++++.+++.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~ 349 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIYSIMK 349 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHHHHHH
Confidence 1223556799999875 458999999999999999997 99999876554433333333222222 2346899999999
Q ss_pred HhcccCcCCCCCHHHHhc
Q 011647 306 KMLHADPKERLSAAEVLN 323 (480)
Q Consensus 306 ~~L~~dp~~R~t~~~~l~ 323 (480)
+||+.||.+|||+.++++
T Consensus 350 ~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 350 MCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-44 Score=346.68 Aligned_cols=257 Identities=25% Similarity=0.468 Sum_probs=221.9
Q ss_pred cce-eecceecccCCeEEEEEEEcCCCceEEEEEeccc-ccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe--
Q 011647 67 NTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR-KLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS-- 142 (480)
Q Consensus 67 ~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~-- 142 (480)
++| ++...||+|+|-+||+|.+..+|..||==.++.. ....+...+++..|+.+|+.|. ||||+++|+.|.+...
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCce
Confidence 344 4567899999999999999999988874333222 2234556799999999999998 9999999999987665
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+.+|+|++..|+|..++++.++++...++.|++||+.||.|||++. |||||||-+||+|+ +..|.|||+|+|+|..
T Consensus 118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHH
Confidence 8899999999999999999999999999999999999999999986 99999999999997 6788999999999998
Q ss_pred cCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
...... ...+|||.|||||++...|+..+||||||+.|+||.|+.+||.. .+...+++++..|..+-..... -.++
T Consensus 196 ~r~s~a-ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV--~dPe 272 (632)
T KOG0584|consen 196 LRKSHA-KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV--KDPE 272 (632)
T ss_pred hhcccc-ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc--CCHH
Confidence 764433 44799999999999999999999999999999999999999965 4566778888887665433322 2689
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+++||.+||.. .++|+|+.|+|+||||..+
T Consensus 273 vr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 273 VREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 99999999999 9999999999999999986
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=329.54 Aligned_cols=254 Identities=30% Similarity=0.461 Sum_probs=212.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.++.+++.||+|.+.... .......+.+|+++++++. ||||+++++.+..++.+++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 5788899999999999999999999999999986543 2244567889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+.+++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++ .++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHHH
Confidence 999999999998876 789999999999999999999999 9999999999999994 46779999999987653322
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-----EQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
. ....|+..|+|||.+.+ .++.++||||||+++|+|++|..||.... .......+...... ..+...++.+
T Consensus 156 ~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (265)
T cd06605 156 A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP--RLPSGKFSPD 232 (265)
T ss_pred h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--CCChhhcCHH
Confidence 2 22678899999998865 48899999999999999999999996542 22333333332211 1111127889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.++|.+||..||++|||+.+++.||||+..
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 9999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=328.44 Aligned_cols=248 Identities=28% Similarity=0.436 Sum_probs=201.0
Q ss_pred eecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHH---HHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ---IMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~---~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
.||+|+||.||+|.+..+++.||+|++.+..............|.. .++... ||+|+.+++.+...+.+++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCEEEEEEecC
Confidence 4899999999999999999999999987644322222222333433 333344 999999999999999999999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccC
Q 011647 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230 (480)
Q Consensus 151 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~ 230 (480)
.|++|.+++...+.+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.++|+|||++...... .....
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~-~~~~~ 155 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKK-KPHAS 155 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCcc-CCcCc
Confidence 9999999998888899999999999999999999999999999999999994 5677999999998765332 22345
Q ss_pred CCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 231 VGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 231 ~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.|+..|+|||++.+ .++.++||||+|+++|+|++|..||.... .............. ....++.++.+++.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~ 231 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----LPDSFSPELRSLLE 231 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC----CCCcCCHHHHHHHH
Confidence 79999999999863 47899999999999999999999997763 22222222222222 22356899999999
Q ss_pred HhcccCcCCCC-----CHHHHhcCCccccc
Q 011647 306 KMLHADPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 306 ~~L~~dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
+||..+|.+|| ++.++++||||+..
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 99999999999 99999999999754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=332.57 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=202.0
Q ss_pred ccceeecceecccCCeEEEEEEEcC----------------CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD----------------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (480)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++.+++ |||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~n 80 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLK-DPN 80 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-CCC
Confidence 4679999999999999999998642 34579999986532 2334567899999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHcCCe
Q 011647 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-------------------HYSERAAANLCRQMVTVVHYCHSMGVM 190 (480)
Q Consensus 130 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~~i~~qi~~~l~~lH~~~iv 190 (480)
|+++++++.+.+..++||||+.+++|.+++.... .+++..+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999886431 367788999999999999999999999
Q ss_pred ecCCCCcceecccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh--
Q 011647 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-- 264 (480)
Q Consensus 191 H~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-- 264 (480)
||||||+|||++ .++.+||+|||++........ .....++..|+|||++. +.++.++||||||+++|+|++
T Consensus 161 H~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 161 HRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred ccCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999994 567799999999986543322 12335578899999875 468999999999999999986
Q ss_pred CCCCCCCCChHHHHHHHHc----CCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 265 GVPPFWGETEQSIFDAILR----GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 265 g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+..||...........+.. ..........+.+++.+.+|+.+||..||++|||+.++.+
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 5678887766655544322 1111111122457899999999999999999999999943
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=331.67 Aligned_cols=256 Identities=32% Similarity=0.539 Sum_probs=211.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+.+|+++++++. |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEE
Confidence 369999999999999999999999999999998865322 3334578899999999999 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||+.++.+..+..+...+++..+..++.||+.||.|||+.|++|+||+|+||++ ++++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCcc
Confidence 9999887776666666779999999999999999999999999999999999999 457789999999988765433
Q ss_pred -ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC----------------
Q 011647 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~---------------- 286 (480)
......++..|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+.....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 3344678899999998754 478899999999999999999999987665443333221100
Q ss_pred ---cCCCC--------CC-CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 287 ---DFSSD--------PW-PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 287 ---~~~~~--------~~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.++.. .+ ..++.++.+||.+||..+|++|||++++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00000 01 1248899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=329.25 Aligned_cols=256 Identities=25% Similarity=0.343 Sum_probs=205.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.++.+|+.||+|.+..... ......+..|+.++.+..+||||+++++++..++..++||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 68899999999999999999999999999999865422 1223455667776555555999999999999999999999
Q ss_pred ecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 148 DLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 148 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
||++ ++|.+++.. ...+++..++.++.||+.||.|||++ +++||||||+||++ +.++.+||+|||++....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccc
Confidence 9996 577776653 34689999999999999999999997 99999999999999 456789999999988754
Q ss_pred CCCccccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
.........|+..|+|||++.+ .++.++|+|||||++|+|++|..||.... ..+....+..... +..+...+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 233 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS--PQLPAEKF 233 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--CCCCcccc
Confidence 3333334578899999998753 36789999999999999999999996532 2233333332211 11122357
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
|.++.++|.+||..+|.+||++.++++||||+...
T Consensus 234 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 234 SPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 89999999999999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=318.41 Aligned_cols=265 Identities=29% Similarity=0.462 Sum_probs=210.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCC----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-C
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-R 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-~ 140 (480)
...|.++..||+|.||.||+|..+.++ +.+|||.++..+..+. .....-||+.+++.+. ||||+.+..++.. +
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELK-HPNVISLVKVFLSHD 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhc-CCcchhHHHHHhccC
Confidence 356999999999999999999765543 2799999876543222 2355779999999999 9999999998876 8
Q ss_pred CeEEEEEecCCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC-CCCCCeeEee
Q 011647 141 HSVNLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AEDSPLKATD 214 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~ikl~D 214 (480)
..+++++||.+. +|+..+.- .+.++...++.|++||+.|+.|||++.|+||||||.|||+..+ .+.|.|||+|
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 899999999965 88888753 2459999999999999999999999999999999999999753 2458899999
Q ss_pred cccceecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHH
Q 011647 215 FGLSVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETE---------QSIFD 279 (480)
Q Consensus 215 fg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~---------~~~~~ 279 (480)
||+++.+...- .....+.|.+|+|||.+-| .|+++.||||.|||+.||+|-.+.|.+... .+.++
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99999875431 3345678999999998864 599999999999999999999988876442 23334
Q ss_pred HHHcCCCcCCCCCCC---------------------------------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 280 AILRGHIDFSSDPWP---------------------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~---------------------------------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
+|..-........|+ .-++...+|+.+||+.||-+|+|++++|+|+|
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 443221111111221 12455889999999999999999999999999
Q ss_pred ccccCCC
Q 011647 327 MRVDGDA 333 (480)
Q Consensus 327 ~~~~~~~ 333 (480)
|+.+.-+
T Consensus 340 F~~d~lp 346 (438)
T KOG0666|consen 340 FTEDPLP 346 (438)
T ss_pred cccCCCC
Confidence 9987554
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=339.35 Aligned_cols=263 Identities=31% Similarity=0.519 Sum_probs=209.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+.++|.+.+.||+|+||.||+|.+..+|+.||||.+.... .......+.+|+.++++++ ||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 4568999999999999999999999999999999985321 2234466788999999998 99999999886544
Q ss_pred -CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 -HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
...++|+||+.+ +|.+.+. .+.+++..++.++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence 358999999964 8877664 4579999999999999999999999999999999999999 456779999999987
Q ss_pred ecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC--------
Q 011647 220 FFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------- 285 (480)
Q Consensus 220 ~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~-------- 285 (480)
...... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 654322 1223578999999998643 47889999999999999999999997765433222211100
Q ss_pred --------------CcC-CC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 286 --------------IDF-SS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 286 --------------~~~-~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
... .. ...+.+++++.++|.+||+.+|++|||+.++++||||+.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~ 303 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSD 303 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCC
Confidence 000 00 012456888999999999999999999999999999987665543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=332.71 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=209.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--CeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~~~ 144 (480)
+.|.+.+.||.|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++++. ||||+++++++... ...|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 4699999999999999999999999999999998654322 223345678999999998 99999999998877 8999
Q ss_pred EEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+.+ +|.+++.... .+++..++.++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++.....
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCceeeccC
Confidence 99999964 8988887644 599999999999999999999999999999999999994 567799999999887654
Q ss_pred C-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc-------------
Q 011647 224 G-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------------- 287 (480)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~------------- 287 (480)
. .......+++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+......
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 23334567899999998864 3688999999999999999999999877765554443221100
Q ss_pred -------------CCCCCCCC--CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 -------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 -------------~~~~~~~~--~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.....++. +++.+.++|.+||+.+|++|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00011222 48889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=329.70 Aligned_cols=259 Identities=25% Similarity=0.355 Sum_probs=214.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++.+.||+|+||+||++.+..+++.||+|++.... .....+.+.+|+++++.++ ||||+++++.+...+.+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEE
Confidence 57999999999999999999999999999999886432 2334577899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+++++|.+++...+.+++..+..++.+++.||.|||+ .|++||||||+||++ +.++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh-
Confidence 9999999999998888889999999999999999999997 699999999999999 45677999999998754322
Q ss_pred ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHcCCCcCCCCCC
Q 011647 226 VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-----------SIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-----------~~~~~~~~~~~~~~~~~~ 293 (480)
......|+..|+|||++. +.++.++|||||||++|++++|..||...... +....+..... +..+.
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 235 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--PRLPS 235 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--CCCCc
Confidence 223457899999999875 46888999999999999999999999765432 22222222111 11112
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
..++.++.+|+.+||.+||++|||+.++++|+||.......
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~~ 276 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRAS 276 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccccc
Confidence 23788999999999999999999999999999997655444
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=290.89 Aligned_cols=257 Identities=28% Similarity=0.529 Sum_probs=215.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|...++||+|.||+||+|++..++..||+|.++.... +...-....+|+-+++.+. |.|||+++++...+..+.+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 46777899999999999999999999999999875432 2222356789999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
|||. .+|..+..+ ++.++.+.++.++.|+++||.++|++++.||||||+|.|| +.++.+||+|||+++.+.-. .
T Consensus 81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCceE
Confidence 9994 588877765 5779999999999999999999999999999999999999 55777999999999976533 2
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCC---------
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW--------- 293 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------- 293 (480)
.++..+.|.+|.+|.++-+ -|++..|+||.|||+.|+.. |++.|.+.+-.+.+.+|.+.........|
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 4455678999999998854 38999999999999999986 88889988887777777553333222222
Q ss_pred ----------------CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 294 ----------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 294 ----------------~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
|.++..-+++++++|.-+|.+|++++++|+||||...
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 2345667899999999999999999999999999743
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=329.31 Aligned_cols=254 Identities=30% Similarity=0.483 Sum_probs=203.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|.+.+.||+|++|.||+|.++.+++.||||.+..... ......+.+|+.+++++. ||||+++++++.++...++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEE
Confidence 579999999999999999999998999999999865332 112245678999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+.+ +|.+++... +.+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAKSVPS 157 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECccccccccCCCC
Confidence 999975 898888764 4689999999999999999999999999999999999994 5667999999998754321
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHcCCCc--------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHID-------------- 287 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~-------------- 287 (480)
.......++..|+|||++.+ .++.++||||+|+++|+|++|..||.... ..+....+......
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 12223457889999998754 47889999999999999999999997655 22222222110000
Q ss_pred -----CC-------CCCCCCCC--HHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 -----FS-------SDPWPNIS--SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 -----~~-------~~~~~~~~--~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.. ....+.++ .++.+++.+||+.+|++|||+.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00112344 888999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=330.38 Aligned_cols=259 Identities=28% Similarity=0.463 Sum_probs=210.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|++|+||+|.++.+++.||+|.+..... .......+.+|+++++++. ||||+++++++.+...+++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEE
Confidence 469999999999999999999999999999999865432 2233466889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||+. ++|.+.+..... +++..+..++.||+.||.|||++|++||||+|+||+++. .+..+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence 99995 588887765443 578889999999999999999999999999999999953 3456999999999765322
Q ss_pred -CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC-------------
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF------------- 288 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~------------- 288 (480)
.......|++.|+|||++.+ .++.++||||||+++|+|++|..||......+....+.......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 22234567899999998754 47889999999999999999999998776655444432210000
Q ss_pred --------CC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 289 --------SS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 289 --------~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.. ...+.+++++.++|.+||+.+|++||++.++++||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 00 0124578899999999999999999999999999999854
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=329.36 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=210.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCC-----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTK-----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..|++.+.||+|+||.||+|.....+ ..||+|.+.... .......+.+|+.++.++. ||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCC
Confidence 46889999999999999999986554 679999886432 2334567899999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 142 SVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
..+++|||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~--- 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG--- 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---
Confidence 999999999999999998764 4578899999999999999999999999999999999994
Q ss_pred CCCCeeEeecccceecCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
+++.++|+|||++....... ......+++.|+|||.+. +.++.++|||||||++|+|++ |..||.+....+....
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 56779999999998654322 123345688899999875 468999999999999999998 9999998888877777
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+....... ....+|.++.+|+.+||+.||.+||++.+++++
T Consensus 239 i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 239 IRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 76554322 124688999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=339.81 Aligned_cols=265 Identities=30% Similarity=0.493 Sum_probs=213.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+..+|.+.+.||+|+||+||+|.+..+++.||||.+.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcC-CCCccchHHheecccccc
Confidence 3467999999999999999999999999999999986432 22333466788999999998 99999999987544
Q ss_pred -CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 -HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
...++||||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++.
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~ 156 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLAR 156 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcccc
Confidence 35899999995 68999988888899999999999999999999999999999999999994 46779999999998
Q ss_pred ecCCC-CccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC------------
Q 011647 220 FFKPG-DVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG------------ 284 (480)
Q Consensus 220 ~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~------------ 284 (480)
..... .......|+..|+|||.+. ..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 76433 2223456889999999875 35889999999999999999999999776543322222110
Q ss_pred -----------CCcCC----CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 285 -----------HIDFS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 285 -----------~~~~~----~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
..... ....+.+++++.++|.+||+.+|++|||++++++||||+....++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~ 302 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSD 302 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCccc
Confidence 00000 0113468899999999999999999999999999999987655543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=361.66 Aligned_cols=253 Identities=28% Similarity=0.370 Sum_probs=206.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||+|++...........+++.+|+++++++. ||||+++++++.+++..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEE
Confidence 57999999999999999999999999999999987543333344567899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 147 MDLCAGGELFDRIIAK-----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
|||++|++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999999999988642 235567788999999999999999999999999999999 45677999999
Q ss_pred ccceecCCCC-------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 011647 216 GLSVFFKPGD-------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (480)
Q Consensus 216 g~a~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 275 (480)
|++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998652110 1123579999999998865 5889999999999999999999999875554
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
........ ..+....++..+++.+.+++.+||..||++|++..+.+.+
T Consensus 238 ki~~~~~i-~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 238 KISYRDVI-LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhhhhc-cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33322111 1111122345788999999999999999999987776643
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=332.99 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=203.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC---
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--- 141 (480)
..++|.+.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.+++++. ||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKATPY 87 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccc
Confidence 34579999999999999999999999999999998864322 2222345678999999998 999999999886543
Q ss_pred -----eEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 142 -----SVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 142 -----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
..++||||+. ++|.+.+.... .+++..++.++.||+.||.|||++|++|+||||+||++ +.++.+||+||
T Consensus 88 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~df 163 (310)
T cd07865 88 NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADF 163 (310)
T ss_pred cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcC
Confidence 4599999995 47877776543 68999999999999999999999999999999999999 45678999999
Q ss_pred ccceecCCCC-----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC
Q 011647 216 GLSVFFKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 216 g~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|++....... ......++..|+|||++.+ .++.++||||||+++|+|++|+.||.+.........+......+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9997654322 1123467889999998754 36889999999999999999999998876654443333211111
Q ss_pred CCCC----------------------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 289 SSDP----------------------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 289 ~~~~----------------------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+... ....+..+.++|.+||..||.+|||++++|+||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 1000 00125678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=330.58 Aligned_cols=254 Identities=35% Similarity=0.697 Sum_probs=220.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++++.+||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36899999999999999999999999999999987654444445577889999999997799999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
||++++++|.+++.+.+.+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCccc
Confidence 9999999999999988899999999999999999999999999999999999999 456779999999988654321
Q ss_pred --------------------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC
Q 011647 226 --------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (480)
Q Consensus 226 --------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~ 284 (480)
......|+..|+|||++.. .++.++|+||||++++++++|..||........+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 1123467889999998754 4788999999999999999999999888766666665544
Q ss_pred CCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH----HHHhcCCcc
Q 011647 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSA----AEVLNHPWM 327 (480)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~----~~~l~h~~~ 327 (480)
...++ ..+++.+.++|.+||+.+|.+||++ +++++||||
T Consensus 238 ~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 43333 3578999999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=325.25 Aligned_cols=248 Identities=18% Similarity=0.330 Sum_probs=207.1
Q ss_pred cceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+|++.+.||+|+||.||+|.++ ..+..||+|.+.... .......+.+|+.++.++. ||||+++++++..++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCc
Confidence 56999999999999999999875 345789999986532 2333467889999999997 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+++++|.+++... +.+++..+..++.||+.||+|||++|++||||||+||+++ .++.++++|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCccccccc
Confidence 9999999999999988764 5789999999999999999999999999999999999994 56789999999876543
Q ss_pred CCCccc--cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDVFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
...... ...++..|+|||.+. +.++.++|||||||++|++++ |..||......+....+..+... + ....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 235 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-P--APRNCPN 235 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-C--CCCCCCH
Confidence 222111 234567899999875 458999999999999999775 99999988888777776654321 2 2346889
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+.+++.+||+.+|.+||++.++++
T Consensus 236 ~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 236 LLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHH
Confidence 9999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-43 Score=315.88 Aligned_cols=257 Identities=27% Similarity=0.539 Sum_probs=231.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.+.+.||+|+|++|.+++++.+.+.||+|++++.-....+++.-+..|-.+..+.++||.+|-++.+|+.+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46799999999999999999999999999999999988887778888899999999999999999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee-cCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~-~~~~ 224 (480)
|.||++||+|.-.+.+.+.++++.++.+...|+.||.|||++|||.||||.+|+|+ +..+++||.|+|+++. +.++
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCC
Confidence 99999999998888888999999999999999999999999999999999999999 5678899999999986 4567
Q ss_pred CccccCCCCcccccccccccc-CCCchhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHHcCCCcCCCCCCCC
Q 011647 225 DVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG--------ETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg~~pf~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
+..++++|||.|.|||++++. |+..+|.|+||++++||+.|+.||.- +++.-+++.|+...+..|. .
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr----s 481 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----S 481 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----e
Confidence 778889999999999999875 99999999999999999999999942 2334455666776666654 5
Q ss_pred CCHHHHHHHHHhcccCcCCCC------CHHHHhcCCcccc
Q 011647 296 ISSSAKDIVKKMLHADPKERL------SAAEVLNHPWMRV 329 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~------t~~~~l~h~~~~~ 329 (480)
+|-.+..+++.-|.+||.+|. ...++-.|+||+.
T Consensus 482 lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 482 LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 677888999999999999997 6789999999984
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=331.12 Aligned_cols=257 Identities=23% Similarity=0.334 Sum_probs=206.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|...+.||+|+||.||++.+..+++.||+|.+..... ......+.+|+.++.++.+||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 56677899999999999999999999999999865432 2345678899999999977999999999999999999999
Q ss_pred ecCCCCchHHHH---H--hcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 148 DLCAGGELFDRI---I--AKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 148 e~~~~~~L~~~l---~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
||+.+ ++.++. . ..+.+++..+..++.|++.||+|||+. |++||||||+||+++ .++.++|+|||++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecchhHHh
Confidence 99854 554432 2 246799999999999999999999974 999999999999994 4667999999998765
Q ss_pred CCCCccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCC-CcCCCCCCCC
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGH-IDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 295 (480)
..........|++.|+|||++.+ .++.++|||||||++|+|++|..||..... ......+.... ..........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEERE 238 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCc
Confidence 44333344578999999998864 478899999999999999999999976542 12222222221 1222222245
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
++.++.+||.+||+.+|++|||++++++||||+..
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 239 FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 88999999999999999999999999999999854
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=324.46 Aligned_cols=251 Identities=27% Similarity=0.504 Sum_probs=209.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|++..+++.||||.+.............+.+|+.+++.++ ||||+++++++.+.+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEEE
Confidence 46999999999999999999999999999999886544444455567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceecc
Confidence 999999999887753 34589999999999999999999999999999999999994 46679999999988764
Q ss_pred CCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... .....|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||..... ......+.... ++..+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSE 235 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCH
Confidence 3221 234578899999998764 578899999999999999999999966532 33344333322 22222345788
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+.+++.+||..+|++||++.++++
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHH
Confidence 9999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=326.07 Aligned_cols=257 Identities=31% Similarity=0.539 Sum_probs=216.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|...+.||+|++|.||++.+..+++.+++|.+... .....+.+.+|+.+++.+. ||||+++++++...+..++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v 94 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVV 94 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEE
Confidence 3455668999999999999999989999999987532 2233466889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
+||+.|++|.+++.. +++++..+..++.|++.||.|||++||+||||+|+||++ +.++.++|+|||.+.......
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCc
Confidence 999999999998876 679999999999999999999999999999999999999 456789999999877543221
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+........ .....++..+.+++
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li 249 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKL-KNLHKVSPRLRSFL 249 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCC-cccccCCHHHHHHH
Confidence 2233568999999998865 488899999999999999999999988777666666655432221 12234789999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.+||+.+|++|||+.++++||||+....
T Consensus 250 ~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 250 DRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHHcccChhhCcCHHHHccCcccccCCC
Confidence 9999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=328.04 Aligned_cols=253 Identities=28% Similarity=0.501 Sum_probs=208.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||.|++|.||+|.+..+|..||||.+..... ....+.+.+|+.+++++. ||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEE
Confidence 48899999999999999999999999999999865432 223466788999999997 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 148 DLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 148 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||+++ +|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ ++++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCC
Confidence 99975 888877654 358999999999999999999999999999999999999 45667999999998754322
Q ss_pred -CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC-------------
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF------------- 288 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~------------- 288 (480)
.......+++.|+|||++.+ .++.++||||||+++|+|++|..||.+.+..+....+.......
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 12234567889999998754 36889999999999999999999998877655544433211000
Q ss_pred -----CC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 289 -----SS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 289 -----~~-------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+. ...+.++..+.++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00 0013457889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=323.69 Aligned_cols=254 Identities=29% Similarity=0.464 Sum_probs=217.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|++|.||+|.+..+++.||+|++..... ......+.+|+..+.++. ||||+++++++.....+++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 58889999999999999999999999999999865432 134577999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||+++++|.+++.....+++..+..++.|++.||.|||+ .|++|+||+|+||++ +.++.++|+|||++........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 999999999999888889999999999999999999999 999999999999999 4567799999999987654332
Q ss_pred c-ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHcCCCcCCCCCCCC-CCHHH
Q 011647 227 F-KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE---TEQSIFDAILRGHIDFSSDPWPN-ISSSA 300 (480)
Q Consensus 227 ~-~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 300 (480)
. ....++..|+|||.+.+ .++.++|+||||+++|+|++|..||... ...+....+....... .... ++..+
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 232 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS---LPAEEFSPEF 232 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC---CCcccCCHHH
Confidence 2 24568899999998864 4788999999999999999999999776 3344444444332211 1123 78999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.++|.+||..+|++||++.++++||||+..
T Consensus 233 ~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 233 RDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=325.29 Aligned_cols=249 Identities=35% Similarity=0.629 Sum_probs=215.7
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||.|+||.||++.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++.+..+...|+||||+.+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999999999999987654434455678999999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC---------
Q 011647 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--------- 225 (480)
Q Consensus 155 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~--------- 225 (480)
|.+++.+.+.+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCcccccccccc
Confidence 999998878899999999999999999999999999999999999994 56779999999987643321
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......++..|+|||.+.. ..+.++||||||+++|+|++|..||...........+..+...++.. ..++..+.+++
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 234 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--ccCCHHHHHHH
Confidence 1233568889999998754 47889999999999999999999999888888777776655443332 23589999999
Q ss_pred HHhcccCcCCCCCH---HHHhcCCcccc
Q 011647 305 KKMLHADPKERLSA---AEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~t~---~~~l~h~~~~~ 329 (480)
.+||+.+|.+|||+ .++|+||||+.
T Consensus 235 ~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 99999999999999 99999999973
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=331.56 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=203.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCce--EEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.|.+.+.||+|+||.||+|.+..++.. +|+|.+.. .........+.+|+.++.++.+||||+++++++..++.++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 4689999999999999999999877765 46666542 2233445678899999999955999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC
Q 011647 145 LIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
+||||+++++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++ .++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CCC
Confidence 9999999999999987543 478999999999999999999999999999999999994 567
Q ss_pred CeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCC
Q 011647 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 286 (480)
.+||+|||++.............++..|+|||++.+ .++.++|||||||++|+|+| |..||......+....+....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~- 240 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY- 240 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-
Confidence 799999999864322111112234667999998864 47899999999999999998 999998877766666554331
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.......+++++.+++.+||+.+|++||++.+++.+
T Consensus 241 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 --RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111223578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=340.50 Aligned_cols=245 Identities=36% Similarity=0.567 Sum_probs=212.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+...|.+...+|.|+|+.|-.+.+..+++.+++|++.+... ...+|+.++....+||||+++.+.+.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceee
Confidence 56779999999999999999999999999999999976532 23467777777788999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||++.|+.+.+.+.....+. ..+..|+.+|+.|+.|||++|||||||||+|||+. +..++++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchh
Confidence 9999999999999888776666 77888999999999999999999999999999995 46788999999999876644
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
...-+-|..|.|||++.. .|+.++|+||||++||+||+|+.||...... ++...+..+.+. ..+|..+++
T Consensus 470 --~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~AKd 541 (612)
T KOG0603|consen 470 --CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDEAKD 541 (612)
T ss_pred --hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHHHHH
Confidence 333456788999999875 5999999999999999999999999886665 455545444332 478999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
||++||+.||.+|+++.+++.||||
T Consensus 542 Ll~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 542 LLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HHHHhccCChhhCcChhhhccCcch
Confidence 9999999999999999999999999
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=330.70 Aligned_cols=255 Identities=27% Similarity=0.454 Sum_probs=213.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|...+.||+|+||.||+|.+..++..||+|.+.... .....+.+.+|+.+++++. ||||+++++++..+...++
T Consensus 3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06642 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWI 79 (277)
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEE
Confidence 346888899999999999999999899999999986432 2234567899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++. .+.+++..+..++.|++.||.|||++|++|+||+|+||++. .++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 80 IMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEEccCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCcc
Confidence 999999999988775 45789999999999999999999999999999999999994 56779999999987654332
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|+..|+|||++.+ .++.++|+||||+++|+|++|..||...........+...... .....++.++.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 232 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKEF 232 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHHH
Confidence 1223468899999999865 4788999999999999999999999766554444433322211 1123568899999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
|.+||..+|++||++.++++||||+..
T Consensus 233 i~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 233 VEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 999999999999999999999999754
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=323.32 Aligned_cols=254 Identities=26% Similarity=0.457 Sum_probs=214.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.-|.+.+.||+|+||.||+|.+..++..||+|++.... .......+.+|+.++.++. ||||+++++.+..+...++|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEE
Confidence 45888899999999999999999899999999875432 2234567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||+.+++|.+++. .+.+++..+..++.|++.|+.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~i~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 81 MEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccceecccchh
Confidence 99999999988775 45789999999999999999999999999999999999994 56779999999987654322
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|+..|+|||.+.+ ..+.++|+|||||++|+|++|..||...........+.....+ .....++.++.+++
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i 233 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEFV 233 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHHH
Confidence 1233568899999998864 4788999999999999999999999877665555554433221 11235789999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCccccc
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+||+.+|.+||++.++++||||...
T Consensus 234 ~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 234 EACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHccCChhhCcCHHHHHhCHHHhhh
Confidence 99999999999999999999999865
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=321.92 Aligned_cols=253 Identities=26% Similarity=0.512 Sum_probs=214.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||+|.++.++..||+|.+..... .....+.+.+|+.+++.++ ||||+++++.+......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEE
Confidence 48889999999999999999999999999999865432 2234567889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++++|.+++.... .+++..+..++.|++.||.|||+++++|+||||+||+++. ++..+||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEecccccchhccCCc
Confidence 9999999999887643 4799999999999999999999999999999999999953 23457999999987654332
Q ss_pred c-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
. .....|++.|+|||++.. .++.++|+||||+++|+|++|..||...........+....... ..+.++.++.++
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 233 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP---ISPNFSRDLRSL 233 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC---CCCCCCHHHHHH
Confidence 2 223468999999998754 58899999999999999999999998777666665555443321 224678999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
|.+||..+|++|||+.++++||||
T Consensus 234 i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 234 ISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhccChhhCcCHHHHhhCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=326.08 Aligned_cols=257 Identities=27% Similarity=0.465 Sum_probs=215.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|...+.||+|+||.||+|.+..++..||+|.+.............+.+|+++++++. |||++++++++.++...+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEE
Confidence 3455889999999999999999999999999999987554434445567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+.| +|.+.+.. ...+++..+..++.|++.||.|||++||+||||+|+||++ +.++.++|+|||++.....
T Consensus 102 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 102 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASP 177 (317)
T ss_pred EEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCC
Confidence 99999975 77776654 5669999999999999999999999999999999999999 4567799999999875433
Q ss_pred CCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
. ....|++.|+|||++. +.++.++|||||||++|+|++|..||...........+....... .....+++.
T Consensus 178 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 252 (317)
T cd06635 178 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--LQSNEWSDY 252 (317)
T ss_pred c---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--CCCccccHH
Confidence 2 3457899999999863 357889999999999999999999998877666555555443221 122457889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.+++.+||+.+|.+||++.++++|+|+....
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 99999999999999999999999999997543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=330.06 Aligned_cols=258 Identities=30% Similarity=0.550 Sum_probs=216.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
+..|.....||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++..+. ||||+++++.+..++..++
T Consensus 20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~i 95 (297)
T cd06659 20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWV 95 (297)
T ss_pred hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEE
Confidence 345666778999999999999999899999999985432 223467889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++. ...+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.......
T Consensus 96 v~e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 96 LMEFLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred EEecCCCCCHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhccccc
Confidence 999999999988664 4578999999999999999999999999999999999999 456789999999987543322
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+...... ....+..++..+.++
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ 250 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVLRDF 250 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHHHHH
Confidence 2234578999999998864 5889999999999999999999999887766666555443222 222335678999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|.+||+.+|++||++.++++||||.....
T Consensus 251 i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 251 LERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 99999999999999999999999986644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-42 Score=327.11 Aligned_cols=253 Identities=30% Similarity=0.475 Sum_probs=207.9
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|.+.+.||.|++|.||+|.++.+|..||+|++..... .......+.+|+.++++++ |||++++++++.+++..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 6778999999999999999999999999999865432 2233466888999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 149 LCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
|+. ++|.+++.... .+++..+..++.|++.||.|||++|++||||+|+||+++ .++.++|+|||++...... .
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc
Confidence 995 68999887765 699999999999999999999999999999999999995 4677999999998764322 1
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-----------------
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------------- 286 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~----------------- 286 (480)
......+++.|+|||++.+ .++.++||||||+++|+|++|..||...+.......+.....
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2233467889999998754 368899999999999999999999987765443333222100
Q ss_pred --------cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 287 --------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 287 --------~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.......+.++..+.++|.+||+.||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00011134678899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=324.59 Aligned_cols=253 Identities=24% Similarity=0.393 Sum_probs=210.0
Q ss_pred ccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++++++ ||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFN-HQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccC
Confidence 4679999999999999999999987 67889999875332 2233456888999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKG-------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
...++||||++|++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||+++.++....+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999999987653 48999999999999999999999999999999999999765555679999
Q ss_pred ecccceecCCCCcc---ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcC
Q 011647 214 DFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 214 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|||+++........ ....++..|+|||++. +.++.++|||||||++|+|++ |..||...+.......+......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~- 240 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL- 240 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 99999865322211 1223356799999885 458999999999999999997 99999888777766665543221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.....++..+.+++.+||+.+|++|||+.++++|
T Consensus 241 --~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 241 --DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1124678999999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=339.11 Aligned_cols=234 Identities=26% Similarity=0.442 Sum_probs=203.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+-||+|+.|-||+|+.. ++.||||.++. .=..+|+-|++|+ ||||+.+.++|....++|||||||..
T Consensus 130 eWlGSGaQGAVF~Grl~--netVAVKKV~e----------lkETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH--NETVAVKKVRE----------LKETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhccCcccceeeeecc--CceehhHHHhh----------hhhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeecccc
Confidence 45999999999999986 47899998742 2246788899998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCC
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~g 232 (480)
|-|...|+..+.++......|..+|+.|+.|||.+.|||||||.-||||.. +..|||+|||-++....-.....++|
T Consensus 197 GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~---~d~VKIsDFGTS~e~~~~STkMSFaG 273 (904)
T KOG4721|consen 197 GQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY---DDVVKISDFGTSKELSDKSTKMSFAG 273 (904)
T ss_pred ccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec---cceEEeccccchHhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999964 55699999999998766556677899
Q ss_pred Cccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccC
Q 011647 233 SAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (480)
Q Consensus 233 t~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 311 (480)
|..|||||+++. ..+.|+|||||||+|||||||..||...+...++--+-.....++. ....|..++-||++||+-.
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv--PstcP~GfklL~Kqcw~sK 351 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV--PSTCPDGFKLLLKQCWNSK 351 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC--cccCchHHHHHHHHHHhcC
Confidence 999999999975 5899999999999999999999999776665444333333333322 2468899999999999999
Q ss_pred cCCCCCHHHHhcC
Q 011647 312 PKERLSAAEVLNH 324 (480)
Q Consensus 312 p~~R~t~~~~l~h 324 (480)
|..||++.++|.|
T Consensus 352 pRNRPSFrqil~H 364 (904)
T KOG4721|consen 352 PRNRPSFRQILLH 364 (904)
T ss_pred CCCCccHHHHHHH
Confidence 9999999999998
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=333.51 Aligned_cols=265 Identities=30% Similarity=0.435 Sum_probs=213.9
Q ss_pred cccceee-cceecccCCeEEEEEEEcCCCceEEEEEecccccCChh-----------cHHHHHHHHHHHHHccCCCCeeE
Q 011647 65 VRNTYIF-GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----------DVEDVRREVQIMHHLTGHRNIVE 132 (480)
Q Consensus 65 ~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~~hp~iv~ 132 (480)
+.++|.. .+.||.|+||+||+|.+..+++.||||.+......... ....+.+|+.+++++. ||||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Ccceee
Confidence 4567864 57799999999999999999999999998654321100 0124678999999998 999999
Q ss_pred EEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 133 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
+++++..++..++||||+. ++|.+++.....+++..+..++.|++.||.|||++||+|+||+|+||+++ .++.++|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~~kl 160 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGICKI 160 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCCEEE
Confidence 9999999999999999996 59999998888899999999999999999999999999999999999994 5677999
Q ss_pred eecccceecCC---------------CCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 011647 213 TDFGLSVFFKP---------------GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (480)
Q Consensus 213 ~Dfg~a~~~~~---------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 275 (480)
+|||++..... ........+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999876541 111223457889999998864 3688999999999999999999999888776
Q ss_pred HHHHHHHcCCCcCCCC------------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 276 SIFDAILRGHIDFSSD------------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+....+.......... ..+..+.++.++|.+||..+|++|||++++|.||||+...
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6555443211100000 0234578899999999999999999999999999998765
Q ss_pred CCC
Q 011647 332 DAS 334 (480)
Q Consensus 332 ~~~ 334 (480)
...
T Consensus 321 ~~~ 323 (335)
T PTZ00024 321 LPC 323 (335)
T ss_pred CCC
Confidence 543
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=325.59 Aligned_cols=254 Identities=28% Similarity=0.456 Sum_probs=202.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|.+.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++ |+||+++++++..+...++|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEEE
Confidence 579999999999999999999999999999999865432 122345678999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+. ++|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccccccCCCC
Confidence 99995 577776654 45688999999999999999999999999999999999994 5667999999998754322
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcC--------------CCc
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRG--------------HID 287 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~--------------~~~ 287 (480)
.......+++.|+|||++.+ .++.++||||||+++|+|++|..||.+.... +.+..+... ...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 22234467899999998864 4788999999999999999999999765432 222111100 000
Q ss_pred CCCC------------CCC--CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 FSSD------------PWP--NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 ~~~~------------~~~--~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+... .+. ..+.++.+++.+||..||.+|||+.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000 001 125789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=319.70 Aligned_cols=248 Identities=30% Similarity=0.533 Sum_probs=212.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||.|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.+. ||||+++++.+.+++.+++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 4888999999999999999999999999999986432 2234577889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||++ +.++.++|+|||.+.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecccc
Confidence 999999999988653 458999999999999999999999999999999999999 456779999999988654322
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|++.|+|||++.+ .++.++|+||||+++|+|++|..||...+.......+..+..... ...++..+.++
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 231 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL---PSHYSYELRSL 231 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC---CcccCHHHHHH
Confidence 2234578999999999864 488999999999999999999999988877766666655543321 23578899999
Q ss_pred HHHhcccCcCCCCCHHHHhcC
Q 011647 304 VKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h 324 (480)
|.+||..||++|||+.+++.-
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-44 Score=340.01 Aligned_cols=258 Identities=30% Similarity=0.532 Sum_probs=237.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
....++..||-||||.|-++..+.....+|+|++++....+....+.+..|-.+|..++ .|.||++|..|.+..++|++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence 45667788999999999999988766679999999998888888899999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||-|-||.|+..+...+.|++.+++.++..+++|++|||++|||.|||||+|.++ +.+|-+||.|||+|+.+..+..
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 6678899999999999998888
Q ss_pred cccCCCCccccccccc-cccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
..+++|||.|.|||++ +.+.+.++|.||||+++|||++|.+||.+.++...+..|+++.-.+..+ ..++..+.+||+
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Lik 653 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLIK 653 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHHH
Confidence 8999999999999975 6678999999999999999999999999999999999998876544332 468899999999
Q ss_pred HhcccCcCCCCC-----HHHHhcCCccccc
Q 011647 306 KMLHADPKERLS-----AAEVLNHPWMRVD 330 (480)
Q Consensus 306 ~~L~~dp~~R~t-----~~~~l~h~~~~~~ 330 (480)
++...+|.+|.. +.+|-+|.||.-.
T Consensus 654 ~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 654 KLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred HHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 999999999985 9999999999754
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=335.78 Aligned_cols=262 Identities=30% Similarity=0.487 Sum_probs=210.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+..+|.+.+.||.|+||.||+|.++.+++.||+|.+..... ...+.+.+|+.++++++ ||||+++++.+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcC-CCcchhhHhhhccccccc
Confidence 45789999999999999999999999999999999865432 34577889999999997 99999999876543
Q ss_pred ----------CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCe
Q 011647 141 ----------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 141 ----------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
...++||||+. ++|.+.+. .+.+++..++.++.||+.||.|||+.||+||||||+||+++. .+..+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~--~~~~~ 154 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVL 154 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCceE
Confidence 35789999996 58887765 457999999999999999999999999999999999999953 45578
Q ss_pred eEeecccceecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC
Q 011647 211 KATDFGLSVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~ 284 (480)
||+|||++....... ......|+..|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999997653221 1123467889999997643 4788999999999999999999999877655444433321
Q ss_pred CC----------------------cCCC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 285 HI----------------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 285 ~~----------------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
.. .... ...+.++.++.+||.+||..||++|||+.++|+||||+....+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~ 310 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPF 310 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCc
Confidence 10 0000 01235788999999999999999999999999999998654443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=337.25 Aligned_cols=264 Identities=28% Similarity=0.454 Sum_probs=213.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE----eCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----DRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~----~~~ 141 (480)
..+|.+.+.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.+++++. ||||+++++++. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCc
Confidence 4679999999999999999999999999999999865322 2334567888999999998 999999998875 345
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceee
Confidence 6899999995 5899988877889999999999999999999999999999999999999 45677999999998765
Q ss_pred CCCC-----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC----------
Q 011647 222 KPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG---------- 284 (480)
Q Consensus 222 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~---------- 284 (480)
.... ......|+..|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 3221 1124578999999998753 4789999999999999999999999776543332222110
Q ss_pred -------------CCcCCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 285 -------------HIDFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 285 -------------~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
....... ..+.++.++.++|.+||+.+|++|||+.+++.||||+....+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence 0000011 12457899999999999999999999999999999986555443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-42 Score=332.57 Aligned_cols=258 Identities=30% Similarity=0.507 Sum_probs=203.8
Q ss_pred ceeecceecccCCeEEEEEEEcC--CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--CeE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSV 143 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~~ 143 (480)
+|.+.+.||+|+||.||+|.+.. +++.||+|.+...........+.+.+|+.++.++. ||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 48889999999999999999988 89999999987643222334467889999999998 99999999999888 889
Q ss_pred EEEEecCCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceeccc-CCCCCCeeEeeccc
Q 011647 144 NLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGL 217 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~-~~~~~~ikl~Dfg~ 217 (480)
++||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++.+||+|||+
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999965 676666432 36899999999999999999999999999999999999954 22277899999999
Q ss_pred ceecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHH
Q 011647 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQS---------IFDAIL 282 (480)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---------~~~~~~ 282 (480)
+....... ......+++.|+|||++.+ .++.++||||||+++|+|++|++||.+..... .+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 88654322 1233467899999998754 47889999999999999999999997654321 111110
Q ss_pred cCC--------------C-------cCCCCCCC------------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 283 RGH--------------I-------DFSSDPWP------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 283 ~~~--------------~-------~~~~~~~~------------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
... . .......+ ..+.++.+++.+||+.||++|||+.++++||||
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0 00001111 567789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=320.68 Aligned_cols=249 Identities=28% Similarity=0.490 Sum_probs=203.0
Q ss_pred ecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 71 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
....||+|+||.||+|.+..++..||+|.+... .....+.+.+|+.++++++ ||||+++++++..++..++|+||+
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecC
Confidence 346899999999999999999999999987543 2334567899999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-c
Q 011647 151 AGGELFDRIIAK-GHY--SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (480)
Q Consensus 151 ~~~~L~~~l~~~-~~~--~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-~ 226 (480)
++++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ..+.++|+|||++....... .
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGTSKRLAGINPC 165 (268)
T ss_pred CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchhheecccCCCc
Confidence 999999988764 445 88889999999999999999999999999999999952 35579999999987654322 2
Q ss_pred cccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.....|++.|+|||++.+ .++.++||||||+++|+|++|..||........ ...... ..........+++++.+
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 243 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM--FKIHPEIPESLSAEAKN 243 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh--hccCCCCCcccCHHHHH
Confidence 233468999999998753 378899999999999999999999976433221 111111 01111112357889999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++.+||+.+|.+|||+.+++.||||
T Consensus 244 li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 244 FILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=324.57 Aligned_cols=248 Identities=24% Similarity=0.440 Sum_probs=209.9
Q ss_pred cceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..|.+.+.||+|+||.||+|.+.. +++.||||.+.... .....+.+.+|+++++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQ-HENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcC-CCCchheeeEEecCC
Confidence 568999999999999999998753 36789999986432 2234578999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG--------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
..++||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||++ +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence 9999999999999999987542 37889999999999999999999999999999999999 456
Q ss_pred CCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011647 208 SPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~ 282 (480)
+.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||......+....+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 7899999999976533221 123346788999998864 58899999999999999998 999998888887777777
Q ss_pred cCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+...... ..++..+.+++.+||..||++||++.++++
T Consensus 239 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 239 QGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 65543322 467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=324.78 Aligned_cols=256 Identities=29% Similarity=0.496 Sum_probs=213.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|...+.||+|+||+||+|.+..++..||+|.+.............+.+|+.+++.++ |||++++++++.+....++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEE
Confidence 345777889999999999999999999999999987554444445567889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+. ++|.+.+.. ...+++..+..++.||+.||.|||++|++|+||+|+||++. .++.+||+|||++.....
T Consensus 99 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 99 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSP- 173 (313)
T ss_pred EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCcccCC-
Confidence 999996 477777654 45689999999999999999999999999999999999994 566799999999865322
Q ss_pred CccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.....|+..|+|||++. +.++.++||||||+++|+|++|..||...........+..... +....+.++..+
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 249 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNEWTDSF 249 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccccCHHH
Confidence 23457899999999873 3478899999999999999999999988766555555443322 222234577889
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
++|+.+||+.+|.+||++.+++.||||+...
T Consensus 250 ~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 250 RGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9999999999999999999999999998643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=324.60 Aligned_cols=253 Identities=30% Similarity=0.497 Sum_probs=209.7
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--CeEEEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVNLI 146 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~~~lv 146 (480)
|.+.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++++. |||++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678899999999999999999999999999997643 22334467889999999998 99999999999888 899999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+++ +|.+++... ..+++..++.++.||+.||.|||+.|++|+||||+||++ ++++.++|+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence 999965 888888765 579999999999999999999999999999999999999 457789999999998765432
Q ss_pred --ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC---------
Q 011647 226 --VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--------- 292 (480)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 292 (480)
......++..|+|||.+.+ .++.++||||||+++|+|++|..||...........+...........
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 2334467889999997753 478899999999999999999999988776655555433211111000
Q ss_pred -----------------CCC-CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 293 -----------------WPN-ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 293 -----------------~~~-~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+.. +++.+.+++.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 112 28889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=326.60 Aligned_cols=256 Identities=30% Similarity=0.554 Sum_probs=212.6
Q ss_pred ceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCC-hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLIN-RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.|++.+.||.|+||.||+|.+. .+|..||+|++....... ....+.+.+|+.++.++.+||||+.+++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3788999999999999999875 478999999986543222 223467889999999997799999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+|||++ .++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccceeccc
Confidence 99999999999999998888899999999999999999999999999999999999994 567899999999987543
Q ss_pred CC--ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHcCCCcCCCCCCC
Q 011647 224 GD--VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~ 294 (480)
.. ......|+..|+|||.+.. .++.++||||||+++|+|++|..||..... ......+.....++ .+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~ 233 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----PQ 233 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC----Cc
Confidence 22 2234568999999998753 467899999999999999999999964332 33333333333222 23
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHhcCCccccc
Q 011647 295 NISSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRVD 330 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~~ 330 (480)
.+++.+.+++.+||..||++|| ++.++++||||+..
T Consensus 234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 5789999999999999999997 89999999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=323.16 Aligned_cols=257 Identities=28% Similarity=0.456 Sum_probs=207.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--CCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~~~~~ 144 (480)
++|...+.||.|++|.||+|.+..+++.||+|.+.... .......+.+|+++++++. ||||+++++++.+ .+.++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEE
Confidence 36888999999999999999999999999999986532 2234577899999999998 9999999998854 34789
Q ss_pred EEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 145 LIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeecccccc
Confidence 99999999999887643 35589999999999999999999999999999999999994 456799999999875
Q ss_pred cCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHcCCCcC-CCCCC
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-----EQSIFDAILRGHIDF-SSDPW 293 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~-----~~~~~~~~~~~~~~~-~~~~~ 293 (480)
..... .....++..|+|||.+.+ .++.++||||||+++|+|++|..||.... ..+....+....... .....
T Consensus 155 ~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 155 LVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred ccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence 43222 224567889999998764 58889999999999999999999997652 233333333322111 11111
Q ss_pred --CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 294 --PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 294 --~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+++.+.++|.+||..+|.+|||+.|+++||||+..
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 1356789999999999999999999999999999643
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=337.40 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=204.0
Q ss_pred cccccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
+...++|.+++.||+|+||+||+|.+... +..||||++.... .....+.+.+|++++.++..||||+++++++
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 33467899999999999999999987543 3469999986432 2334577899999999996799999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhc-------------------------------------------------------
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAK------------------------------------------------------- 162 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~------------------------------------------------------- 162 (480)
.+.+.+|+|||||++|+|.+++...
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 9999999999999999999887542
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 163 -----------------------------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 163 -----------------------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
..+++..+..++.||+.||.|||+.||+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 237788889999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQ- 275 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~- 275 (480)
+ .++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||......
T Consensus 271 ~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 271 A---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred e---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 4 566799999999986543221 123456788999998754 58999999999999999997 99999775443
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+..+ ...+ ....++.++.+++.+||+.||++|||+.++.+
T Consensus 348 ~~~~~~~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 348 TFYNKIKSG-YRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHhcC-CCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 333333333 2222 22467899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=322.21 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=206.6
Q ss_pred cccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|++.+.||+|+||+||+|.+.. ++..||+|.+.... .......+.+|+.+++.++ ||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 45679999999999999999998753 35679999875432 2233456889999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCC
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
....++||||+++++|.+++.+.. .+++..+..++.|++.||.|||+.|++||||||+||+++ +++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCC
Confidence 999999999999999999886532 357788999999999999999999999999999999994 5677
Q ss_pred eeEeecccceecCCCCcc---ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcC
Q 011647 210 LKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~ 284 (480)
++|+|||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+...
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG 237 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998765432221 12345778999998864 58999999999999999999 78999888877777666554
Q ss_pred CCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..... ....+..+.+++.+||+.||++|||+.+++++
T Consensus 238 ~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 238 GLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43221 23578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=317.70 Aligned_cols=254 Identities=28% Similarity=0.484 Sum_probs=211.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccc--cCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--Ce
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK--LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~ 142 (480)
..|.+.+.||+|+||.||+|.+..++..||+|.+.... .........+.+|+.+++++. ||||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence 46999999999999999999999999999999875322 112344568899999999998 99999999998654 56
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++|+||+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccccc
Confidence 889999999999999998878899999999999999999999999999999999999994 46679999999998653
Q ss_pred CC----CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PG----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. .......|+..|+|||++.+ .++.++|+|||||++|+|++|+.||...........+...... ......++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~ 235 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK--PMLPDGVS 235 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC--CCCCcccC
Confidence 21 12234568999999998865 4788999999999999999999999876655544444332211 12234688
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
..+.++|.+||. +|..||++.+++.|||.
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 999999999999 57999999999999995
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=322.10 Aligned_cols=251 Identities=27% Similarity=0.503 Sum_probs=208.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||||.+.............+.+|+.+++.+. ||||+++++++..++..++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEEE
Confidence 46889999999999999999999999999999886544444445577889999999997 99999999999999999999
Q ss_pred EecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcchhhhccc
Confidence 999999999988763 34689999999999999999999999999999999999994 56679999999987654
Q ss_pred CCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
... ......|+..|+|||++.+ .++.++|+||||+++|+|++|..||.+... ......+... .++..+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSE 235 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--CCCCCCcccccH
Confidence 322 2234578999999998864 478899999999999999999999976543 2333333322 222223346789
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+.+++.+||..||++|||+.++++
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=315.61 Aligned_cols=253 Identities=33% Similarity=0.557 Sum_probs=214.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--CeEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVNL 145 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~~~l 145 (480)
+|.+.+.||+|++|.||+|.+..+++.|++|++..... .....+.+.+|+.+++++. ||||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 47888999999999999999999999999999865432 2345688999999999998 99999999999988 89999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|+||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEeccccc
Confidence 999999999999998888999999999999999999999999999999999999995 46779999999998876544
Q ss_pred c---cccCCCCcccccccccccc-CCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 226 V---FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 226 ~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
. .....++..|+|||.+.+. .+.++||||||+++|+|++|..||.... .......+.... ........++..+
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 233 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSG--EPPEIPEHLSEEA 233 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccC--CCcCCCcccCHHH
Confidence 2 3456788999999988654 8899999999999999999999997765 222222222111 1111223568999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.++|.+||..+|++||++.++++||||
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=333.70 Aligned_cols=263 Identities=31% Similarity=0.490 Sum_probs=218.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-----e
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----S 142 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-----~ 142 (480)
+|.+.+.||.|+||.||+|.+..++..||||.+.... ......+.+.+|+.+++.+. ||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccc
Confidence 5889999999999999999999999999999986432 12344577899999999998 999999999987765 7
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|+||||+. ++|.+.+.+.+.+++..++.++.||+.||.|||+.||+||||||+||+++ .++.++|+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEeec
Confidence 899999996 58989888878899999999999999999999999999999999999994 55789999999998765
Q ss_pred CCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC-----
Q 011647 223 PGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD----- 291 (480)
Q Consensus 223 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~----- 291 (480)
... ......+++.|+|||++.+ .++.++|+||||+++|+|++|.+||.+....+....+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 432 2344578999999998864 47889999999999999999999998877666555544321111100
Q ss_pred ----------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCC
Q 011647 292 ----------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336 (480)
Q Consensus 292 ----------------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~ 336 (480)
..+.++.++.++|.+||+.+|++|||++++++||||+.....+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 301 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE 301 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence 123478899999999999999999999999999999876555443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-41 Score=314.64 Aligned_cols=252 Identities=31% Similarity=0.542 Sum_probs=216.2
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|++|.||++.+..+++.||+|.+..... .....+.+.+|++++.++. |||++++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEE
Confidence 48889999999999999999999999999999876533 2345678999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc-
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV- 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~- 226 (480)
||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCccc
Confidence 9999999999998888899999999999999999999999999999999999995 467899999999987654332
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....|+..|+|||.+.+ .++.++||||+|+++|+|++|..||................. ....+.++..+.+++.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH---PPLPEGISPELKDFLM 232 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC---CCCCCCCCHHHHHHHH
Confidence 234568899999998754 478899999999999999999999987665444444332221 1122467899999999
Q ss_pred HhcccCcCCCCCHHHHhcCCcc
Q 011647 306 KMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 306 ~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+||..+|++|||+.+++.||||
T Consensus 233 ~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=331.62 Aligned_cols=260 Identities=29% Similarity=0.469 Sum_probs=211.1
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
.+.++|.+.+.||+|+||.||+|.+..++..||||++.... ........+.+|+.+++++. ||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLSL 89 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCccc
Confidence 35678999999999999999999999999999999985432 22233456889999999998 999999999987554
Q ss_pred ----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 142 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+++||||+ |++|.+++. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~ 164 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGL 164 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeccc
Confidence 458999999 778877765 45799999999999999999999999999999999999994 466799999999
Q ss_pred ceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc--------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-------- 287 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~-------- 287 (480)
+..... ......+++.|+|||++.+ .++.++|+||||+++|+|++|..||.+.........+......
T Consensus 165 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 165 ARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred cccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 986533 2234567899999998764 4788999999999999999999999876654443333221110
Q ss_pred ---------------CC----CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 288 ---------------FS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 288 ---------------~~----~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+. ...++.+++++.++|.+||..||.+|||+.++++||||+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00 0112467888999999999999999999999999999986544
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=317.47 Aligned_cols=245 Identities=37% Similarity=0.711 Sum_probs=214.6
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||.|+||.||++.+..+++.||+|++.............+.+|+.+++++. ||||+++++.+..+..+++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999999889999999987765544456678999999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-CccccCCCC
Q 011647 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGS 233 (480)
Q Consensus 155 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~~~~~~~gt 233 (480)
|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++...... .......|+
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGT 156 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCCcccCCcCC
Confidence 999998888899999999999999999999999999999999999994 4667999999998876443 233456788
Q ss_pred ccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCc
Q 011647 234 AYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312 (480)
Q Consensus 234 ~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 312 (480)
..|+|||.+.+ ..+.++|+||||+++|++++|..||...........+......++ ..++..+.++|.+||..||
T Consensus 157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p 232 (250)
T cd05123 157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDP 232 (250)
T ss_pred ccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCH
Confidence 99999998865 478899999999999999999999988777666666665443333 2458999999999999999
Q ss_pred CCCCCH---HHHhcCCcc
Q 011647 313 KERLSA---AEVLNHPWM 327 (480)
Q Consensus 313 ~~R~t~---~~~l~h~~~ 327 (480)
++||++ .++++||||
T Consensus 233 ~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 233 TKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred hhCCCcccHHHHHhCCCC
Confidence 999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=330.00 Aligned_cols=263 Identities=30% Similarity=0.489 Sum_probs=210.1
Q ss_pred ceeecceecccCCeEEEEEEEcCC--CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----CC
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDT--KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RH 141 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----~~ 141 (480)
+|.+.+.||+|+||.||++.+..+ +..||+|.+.... ......+.+.+|+.+++++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488899999999999999999888 8999999986422 1223346778899999999779999999986532 24
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++++||+. ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCceec
Confidence 5789999985 68999988888899999999999999999999999999999999999994 5677999999999865
Q ss_pred CCCC-----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC--------
Q 011647 222 KPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-------- 286 (480)
Q Consensus 222 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~-------- 286 (480)
.... ......||+.|+|||++.+ .++.++||||+|+++|+|++|..||........+..+.....
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 4321 1234578999999998754 478999999999999999999999987654433332221100
Q ss_pred ---------------cCC----CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 287 ---------------DFS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 287 ---------------~~~----~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
..+ ...++..+..+.+++.+||+.||++|||+.+++.||||+...++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~ 303 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDD 303 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccc
Confidence 000 1123456889999999999999999999999999999987655443
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=357.10 Aligned_cols=149 Identities=30% Similarity=0.528 Sum_probs=137.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.+..+++.||||++.............+.+|+.++..+. ||||+++++++.....+|+|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999997655555555678899999999988 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
|||+.|++|.+++...+.+++..++.|+.||+.||.|||++|||||||||+|||++ .++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCc
Confidence 99999999999998888899999999999999999999999999999999999994 56789999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=325.92 Aligned_cols=258 Identities=29% Similarity=0.506 Sum_probs=214.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++++. ||||+++++.+...+..++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 468999999999999999999998889999999985332 223467889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|+||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++|+||||+||+++ .++.++|+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceecccccc
Confidence 9999999999988764 4688999999999999999999999999999999999994 56779999999987654332
Q ss_pred -ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......|++.|+|||.+.+ .++.++|+||||+++|++++|..||...........+..... ........++..+.++
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 248 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRDF 248 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCCCCccccCHHHHHH
Confidence 2234568899999998754 578899999999999999999999987665443333222111 1111234578899999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|.+||..+|++||++.+++.|+||+....
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred HHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 99999999999999999999999986654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=305.97 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=206.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
..++|++.+.||+|||+.||+++...++..||+|.+.-. ..++.+..++|++..+++. |||+++++++...+
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDG 94 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccC
Confidence 457899999999999999999999999999999998543 3466788999999999998 99999998875433
Q ss_pred -CeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEe
Q 011647 141 -HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
...||++.|...|+|.+.+.. ...+++..+..|+.+|++||++||+.. ++||||||.|||+. +.+.++|.
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~ 171 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLM 171 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEE
Confidence 349999999999999988764 236999999999999999999999999 99999999999994 46779999
Q ss_pred ecccceecCCCC----------ccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHH
Q 011647 214 DFGLSVFFKPGD----------VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETE--QSI 277 (480)
Q Consensus 214 Dfg~a~~~~~~~----------~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~ 277 (480)
|||.+....-.- .......|..|.|||.+. ...+.++|||||||+||.|+.|..||...-. ..+
T Consensus 172 D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 172 DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 999987643111 111234688899999885 2378899999999999999999999953221 112
Q ss_pred HHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.-++.++.+.+|... .+|+.+.++|..||+.||.+||++.+++.+
T Consensus 252 aLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 252 ALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 223445556565543 489999999999999999999999999864
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=315.80 Aligned_cols=252 Identities=31% Similarity=0.581 Sum_probs=217.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|.+.+.||+|+||.||++.+..++..||+|++..... .......+.+|+++++.++ |||++++++.+..+...++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 48889999999999999999999999999999865432 3345577889999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 148 DLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 148 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||+++++|.+.+... ..+++..+..++.+++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccceeeccc
Confidence 999999999988764 6799999999999999999999999999999999999994 467799999999987644
Q ss_pred CC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.. ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.................... ...++.++.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 232 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELR 232 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHH
Confidence 32 2234578999999998754 478899999999999999999999988777766666655433221 236789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+++.+||..+|++|||+.++|+||||
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=334.40 Aligned_cols=265 Identities=29% Similarity=0.484 Sum_probs=215.5
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe-
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS- 142 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~- 142 (480)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|+.+++++. ||||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPASSL 89 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhccccc
Confidence 45678999999999999999999999999999999886432 22334466788999999997 9999999988766554
Q ss_pred -----EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 143 -----VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 143 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEccccc
Confidence 89999999 6799887765 5799999999999999999999999999999999999994 567799999999
Q ss_pred ceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (480)
+...... .....++..|+|||.+.+ .++.++||||||+++|+|++|+.||.+......+..+.......+
T Consensus 165 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 165 ARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred ccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 9865432 344578899999998754 478899999999999999999999987766555544433211000
Q ss_pred -----------------C----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCc
Q 011647 290 -----------------S----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337 (480)
Q Consensus 290 -----------------~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~ 337 (480)
. ..+..++.++.++|.+||..||++|||+.++++||||+.........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~ 311 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP 311 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence 0 01134688999999999999999999999999999998766554433
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=322.38 Aligned_cols=248 Identities=23% Similarity=0.431 Sum_probs=208.1
Q ss_pred ccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...|.+.+.||+|+||+||++... .++..+|+|.+... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 79 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEG 79 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecC
Confidence 357999999999999999999863 34567999988542 2334567899999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKG-------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
+.+++||||+++++|.+++...+ .+++..+..++.|++.||+|||++|++||||||+||++ +++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccC
Confidence 99999999999999999987543 48999999999999999999999999999999999999 456
Q ss_pred CCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011647 208 SPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~ 282 (480)
+.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...........+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~ 236 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 7799999999986543221 122345778999998864 58899999999999999998 999998888777777777
Q ss_pred cCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+..... ...+++++.+++.+||+.||.+|||+.+++.
T Consensus 237 ~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 237 QGRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred cCCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 6553221 2357899999999999999999999999954
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=324.74 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=204.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc--eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
++|.+.+.||+|+||.||+|..+.++. .+++|.+... ......+.+.+|+.++.++.+||||+++++++...+.++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 468999999999999999999887664 4688877532 233345678899999999966999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC
Q 011647 145 LIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
+||||+++++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++ .++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---ENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CCC
Confidence 9999999999999986532 488899999999999999999999999999999999994 567
Q ss_pred CeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCC
Q 011647 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 286 (480)
.+||+|||++..............+..|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 799999999864322111111223457999998764 58899999999999999997 9999988887777776655422
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
......++.++.+|+.+||..+|.+|||++++++
T Consensus 237 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 237 ---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1122468899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-44 Score=369.76 Aligned_cols=260 Identities=28% Similarity=0.478 Sum_probs=223.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.-+|..+..||.|.||.||.|.+..+|...|+|.+...... ......+.+|+.++..+. |||+|+++++-...+.++
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhcc-CccccccCceeecHHHHH
Confidence 445677888999999999999999999999999998765443 455678899999999998 999999999998899999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|.||||+||+|.+.+...+-.++.....+..|++.|+.|||+.|||||||||+||++ +.++.+|++|||.|+.+...
T Consensus 1311 IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecCc
Confidence 999999999999999888889999999999999999999999999999999999999 45678999999999987654
Q ss_pred C-----ccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHcCCCcCCCCCCC
Q 011647 225 D-----VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 225 ~-----~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~ 294 (480)
. .....+||+.|||||++.+ +.+.++|||||||++.||+||+.||...+ +-+++..+..+..+-.+ .
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P---~ 1464 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP---E 1464 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc---h
Confidence 2 2345789999999999864 36779999999999999999999997644 34455555555443222 2
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.+|++.++||.+||..||.+|+++.|+|+|.|-+...+
T Consensus 1465 ~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1465 RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 48999999999999999999999999999999876543
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=336.49 Aligned_cols=257 Identities=32% Similarity=0.560 Sum_probs=223.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
-|..++.||-|+||.|.+++-.+|...||+|.+.+........+..++.|-.||.... .+-||+||-.|++++++|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEE
Confidence 3778889999999999999999999999999999888888888888999999999987 899999999999999999999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-----
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK----- 222 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~----- 222 (480)
+|++||++..+|.+.+-|+|..++.++..+.+|+++.|..|+|||||||+|||| +.+|+|||.|||++.-+.
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999 678999999999986431
Q ss_pred ----CCCc----------------------------------cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHH
Q 011647 223 ----PGDV----------------------------------FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILL 263 (480)
Q Consensus 223 ----~~~~----------------------------------~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll 263 (480)
.++. ....+||+.|+|||++. .+++..+|.||.|||||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 1100 01357999999999985 56999999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHhcCCcccc
Q 011647 264 SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRV 329 (480)
Q Consensus 264 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~h~~~~~ 329 (480)
.|++||...++.+...++.+-...+......++|+++.++|.+++ .++++|. .++++..||||+-
T Consensus 866 ~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred hCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccc
Confidence 999999988876655555544444444455689999999998866 4678888 5677999999984
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=313.48 Aligned_cols=251 Identities=31% Similarity=0.547 Sum_probs=212.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.|.+.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+.+++++. ||||+++++++......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 37888999999999999999998899999999865432 34578999999999999 999999999999999999999
Q ss_pred ecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 148 DLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 148 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||+++++|.+++... ..+++..+..++.|++.||.+||++|++||||+|+||+++ +++.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccccccc
Confidence 999999999988776 6799999999999999999999999999999999999994 467799999999987655433
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...+............... ......++..+.++|.
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 232 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPG-LRNPEKWSDEFKDFLK 232 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCC-cCcccccCHHHHHHHH
Confidence 345678899999998864 47889999999999999999999998775544444433322111 1111234889999999
Q ss_pred HhcccCcCCCCCHHHHhcCCc
Q 011647 306 KMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 306 ~~L~~dp~~R~t~~~~l~h~~ 326 (480)
+||..||++|||+.++++|||
T Consensus 233 ~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 233 KCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHccCChhhCCCHHHHhcCCC
Confidence 999999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=321.21 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=208.3
Q ss_pred cccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+.+.||+|+||.||+|..+. .+..||+|.+.... .......+.+|+.+++.+. ||||+++++++.+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~ 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFT-CHHVVRLLGVVSK 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 35689999999999999999997653 34589999875432 2233456788999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCC
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
....++||||+.+|+|.+++...+ .++...+..++.|++.||.|||++||+||||||+||+++ .++.
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~ 157 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFT 157 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCc
Confidence 999999999999999999986532 246678899999999999999999999999999999994 5677
Q ss_pred eeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcC
Q 011647 210 LKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~ 284 (480)
++|+|||+++....... .....++..|+|||.+. +.++.++|||||||++|+|++ |..||.+....+....+..+
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 237 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999876533221 11234567899999886 458999999999999999998 78999888877776666544
Q ss_pred CCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc------CCccc
Q 011647 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN------HPWMR 328 (480)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~------h~~~~ 328 (480)
..... ....++.+.+++.+||+.||++|||+.++++ ||||+
T Consensus 238 ~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 238 GYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred CCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 32211 1356789999999999999999999999986 89886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=317.36 Aligned_cols=246 Identities=22% Similarity=0.395 Sum_probs=208.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|.+.+.||+|+||.||+|.++.+++.||+|.+... ......+.+|+.+++++. ||||+++++++..++.+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEE
Confidence 4588999999999999999999999999999998643 223567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccc
Confidence 9999999999988754 358999999999999999999999999999999999999 45677999999999876433
Q ss_pred Ccc--ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 225 DVF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 225 ~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+..... ......++.++
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 234 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---MERPEGCPPKV 234 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCCHHH
Confidence 221 12234567999998764 58889999999999999998 9999988777777666655321 12224688999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.++|.+||..||++|||+.++++
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=330.41 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=200.8
Q ss_pred ceeccc--CCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G--~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
..||+| +||+||+|.+..+|+.||+|++..... .....+.+.+|+.+++.+. ||||+++++++..++..++||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecc
Confidence 456666 999999999999999999999865432 3344578899999999888 999999999999999999999999
Q ss_pred CCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc--
Q 011647 151 AGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-- 226 (480)
Q Consensus 151 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~-- 226 (480)
.+++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||++. .++.++++||+.+........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCccc
Confidence 999999988764 3489999999999999999999999999999999999994 466799999986543221110
Q ss_pred ------cccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC--------
Q 011647 227 ------FKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-------- 289 (480)
Q Consensus 227 ------~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~-------- 289 (480)
.....++..|+|||++.+ .++.++|||||||++|+|++|..||...................+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 011234667999999864 368899999999999999999999987665444333322111000
Q ss_pred -----------------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 290 -----------------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 290 -----------------------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+....+++.+.+||.+||+.||++|||+.++|+||||+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 00112356789999999999999999999999999999743
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=321.08 Aligned_cols=254 Identities=29% Similarity=0.470 Sum_probs=207.3
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEEeCCe----
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHS---- 142 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~~~~---- 142 (480)
|++.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|+.+++++. .||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999998899999999865432 2222345667888877774 49999999999988776
Q ss_pred -EEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 143 -VNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 143 -~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
++++|||+.+ +|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||++.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcce
Confidence 9999999965 8888887643 589999999999999999999999999999999999994 45789999999998
Q ss_pred ecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc-----CC----
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-----FS---- 289 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~-----~~---- 289 (480)
............++..|+|||++.+ .++.++|+|||||++|+|++|.+||.+....+....+...... ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 7654444445568899999998864 4788999999999999999999999888776666555431100 00
Q ss_pred --------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 290 --------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 290 --------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
....+.+++.+.++|.+||+.||.+||++.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00012456788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=323.01 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=210.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..+.|.+.+.||+|+||.||+|.+..+++.||||.+..... ......+.+|+.++.++.+||||+++++++.++...+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 34679999999999999999999999899999999864322 2234556678877777777999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+. ++|.+.+.. .+.+++..+..++.||+.||.|||+ .||+||||+|+||++ +.++.+||+|||++....
T Consensus 91 ~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 91 ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLV 166 (296)
T ss_pred EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhcc
Confidence 9999985 477776655 4579999999999999999999997 599999999999999 456789999999987664
Q ss_pred CCCccccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
.........+++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+....+....... ......+
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 245 (296)
T cd06618 167 DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-LPPNEGF 245 (296)
T ss_pred CCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC-CCCCCCC
Confidence 4333344568889999998853 268899999999999999999999976332 33444444332211 1112247
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+.++.+|+.+||..||++||+++++++||||+....
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 899999999999999999999999999999986543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=330.84 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=200.9
Q ss_pred ccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~- 139 (480)
.++|++.+.||+|+||.||+|.+.. +++.||+|++.... .....+.+.+|+.++.++.+||||+++++++..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 4689999999999999999997543 45789999886432 233456788999999999659999999998754
Q ss_pred CCeEEEEEecCCCCchHHHHHhc---------------------------------------------------------
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK--------------------------------------------------------- 162 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 162 (480)
+..++++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 46788999999999999888542
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc---cccCCCCcc
Q 011647 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAY 235 (480)
Q Consensus 163 ----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~ 235 (480)
..+++..+..++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..+..... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 2578999999999999999999999999999999999994 567799999999987543221 122345678
Q ss_pred cccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcC
Q 011647 236 YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPK 313 (480)
Q Consensus 236 y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 313 (480)
|+|||++. ..++.++|||||||++|+|++ |..||.+....+.+............ ....++++.+++.+||+.+|+
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA--PEYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC--CccCCHHHHHHHHHHccCChh
Confidence 99999875 458999999999999999998 99999875543333333222221111 135788999999999999999
Q ss_pred CCCCHHHHhcC
Q 011647 314 ERLSAAEVLNH 324 (480)
Q Consensus 314 ~R~t~~~~l~h 324 (480)
+||++.++++|
T Consensus 319 ~RPs~~ell~~ 329 (337)
T cd05054 319 DRPTFSELVEI 329 (337)
T ss_pred hCcCHHHHHHH
Confidence 99999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=314.61 Aligned_cols=242 Identities=25% Similarity=0.399 Sum_probs=200.3
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||.||+|.+..+++.||+|.+... ........+.+|+++++++. ||||+++++++......++||||+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccC
Confidence 4699999999999999999999999987532 23344567899999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccc---
Q 011647 153 GELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--- 228 (480)
Q Consensus 153 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~--- 228 (480)
++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||++..........
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccccccCC
Confidence 99999987644 589999999999999999999999999999999999994 56679999999987644321111
Q ss_pred cCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 229 DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 229 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
...++..|+|||.+.+ .++.++||||||+++|+|++ |..||...........+...... .....++..+.+++.+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~ 231 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL---PCPELCPDAVYRLMER 231 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC---CCcccCCHHHHHHHHH
Confidence 1122456999998864 58899999999999999997 99999877766655555443221 1223578999999999
Q ss_pred hcccCcCCCCCHHHHhc
Q 011647 307 MLHADPKERLSAAEVLN 323 (480)
Q Consensus 307 ~L~~dp~~R~t~~~~l~ 323 (480)
||..+|++|||+.++++
T Consensus 232 ~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 232 CWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999974
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-41 Score=315.02 Aligned_cols=245 Identities=25% Similarity=0.466 Sum_probs=205.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.|.+.+.||+|+||.||++..+. +..+|+|.+..... ..+.+.+|+.+++++. ||||+++++++......++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc----cHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEE
Confidence 468899999999999999998865 46799998754321 2357889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+++++|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccCCCc
Confidence 999999999998875 35689999999999999999999999999999999999994 56779999999987653322
Q ss_pred cc--ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 VF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.. ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||......+....+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVY 231 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHH
Confidence 21 12235568999999864 58899999999999999999 99999888887777777665432211 24678899
Q ss_pred HHHHHhcccCcCCCCCHHHHhc
Q 011647 302 DIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+++.+||..+|++||++.++++
T Consensus 232 ~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 232 EVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=320.21 Aligned_cols=249 Identities=23% Similarity=0.394 Sum_probs=206.5
Q ss_pred cceeecceecccCCeEEEEEEEc----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..|++.+.||+|+||+||+|... .++..||+|.+.... .......+.+|+.+++++. ||||+++++++..+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCc
Confidence 46889999999999999999853 356789999986422 3344567889999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 143 VNLIMDLCAGGELFDRIIAK-----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
.++||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--- 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---
Confidence 99999999999999988532 2478889999999999999999999999999999999994
Q ss_pred CCCCeeEeecccceecCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
.++.+||+|||++....... ......++..|+|||++. +.++.++||||||+++|+|++ |..||.+.........
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 56679999999998654322 122344667899999886 458899999999999999998 9999988777666666
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+...... .....+++.+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 6554322 1224678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=328.60 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=203.8
Q ss_pred ccCCcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEE
Q 011647 57 VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA 136 (480)
Q Consensus 57 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~ 136 (480)
+........++.|.-...||+|+||.||+|..... ..||||.+....... ...|.+|+.++.+++ |||+|+++|+
T Consensus 65 fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~-H~Nlv~LlGy 139 (361)
T KOG1187|consen 65 FSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG---EREFLNEVEILSRLR-HPNLVKLLGY 139 (361)
T ss_pred eeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc---hhHHHHHHHHHhcCC-CcCcccEEEE
Confidence 33444555678898889999999999999998764 899999876543211 345999999999999 9999999999
Q ss_pred EEeCC-eEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcC---CeecCCCCcceecccCCCCCCe
Q 011647 137 YEDRH-SVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG---VMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 137 ~~~~~-~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
|.+.+ ..++|+|||++|+|.+.|.... .++|..+.+|+.+++.||+|||+.. ||||||||+|||+ +++...
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~a 216 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNA 216 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCE
Confidence 99888 5999999999999999998655 8999999999999999999999854 9999999999999 678889
Q ss_pred eEeecccceecCC-CCccccC-CCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHH----H
Q 011647 211 KATDFGLSVFFKP-GDVFKDL-VGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFD----A 280 (480)
Q Consensus 211 kl~Dfg~a~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~----~ 280 (480)
||+|||+|+.... ....... .||.+|+|||++. +..+.++||||||++|.||+||+.|..... ...... .
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 9999999976554 3333333 8999999999886 578999999999999999999998886532 111111 1
Q ss_pred HHcCCCcC-CCCCC--CCCC-----HHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 281 ILRGHIDF-SSDPW--PNIS-----SSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 281 ~~~~~~~~-~~~~~--~~~~-----~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+..+.... ..+.. ...+ ..+..+..+|++.+|.+||++.++++
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 22211111 11111 1222 23557788999999999999999743
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=321.94 Aligned_cols=257 Identities=30% Similarity=0.526 Sum_probs=213.8
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|.....||+|+||.||++....++..||||.+... .......+.+|+.+++.+. ||||+++++.+...+..++|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEe
Confidence 44457899999999999999999999999987532 2234567889999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-cc
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VF 227 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-~~ 227 (480)
|+++++|.+++. .+.+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++....... ..
T Consensus 98 ~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~~~ 173 (292)
T cd06657 98 FLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRR 173 (292)
T ss_pred cCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccccc
Confidence 999999988664 45789999999999999999999999999999999999994 56779999999987654322 22
Q ss_pred ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
....|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+.........+...... .......++..+.+++.+
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~ 252 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLDR 252 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCCcccCCHHHHHHHHH
Confidence 34568999999998754 5788999999999999999999999887766555554433221 122234678999999999
Q ss_pred hcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 307 MLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 307 ~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
||..+|.+||++.++++||||.....++
T Consensus 253 ~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 253 LLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred HHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 9999999999999999999998765433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=320.02 Aligned_cols=258 Identities=32% Similarity=0.531 Sum_probs=218.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
+....|.+.+.||+|+||.||+|.+..++..|++|++..... ..+.+.+|+.+++.+. |+||+++++.+......
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCK-HPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEE
Confidence 455679999999999999999999998899999999864322 4567889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++|+||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++....
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhhhc
Confidence 99999999999999998876 899999999999999999999999999999999999994 46679999999987543
Q ss_pred CCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
... ......+++.|+|||++.+ .++.++|+||||+++|+|++|..||...........+...... .......++.++
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 246 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLKNPEKWSPEF 246 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCcchhhCCHHH
Confidence 322 2233468889999998764 4789999999999999999999999877665555444433221 111223478999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.++|.+||+.+|.+|||+.++++|+||+..
T Consensus 247 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 247 KDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 999999999999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=315.78 Aligned_cols=251 Identities=26% Similarity=0.512 Sum_probs=209.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||+|.+..+++.||+|.+...........+.+.+|+++++++. |+||+++++.+...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 47999999999999999999999999999999987544444455678999999999997 99999999999999999999
Q ss_pred EecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|||+++++|.+++.. ...+++..+..++.+++.||.|||+.||+||||+|+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccceeeecc
Confidence 999999999988864 34589999999999999999999999999999999999994 56779999999987654
Q ss_pred CCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
... ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||..... ......+..+.. +..+...++.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSE 235 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCH
Confidence 322 2234568899999998764 488899999999999999999999965432 233333333322 2222236788
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+.++|.+||..+|++|||+.++++
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=343.37 Aligned_cols=249 Identities=27% Similarity=0.492 Sum_probs=216.3
Q ss_pred cccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
.+..-.+.+.||+|+||+||+|+... ....||||.++... +....+.|+||++++..+. |||||+++|+|.+
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQ-HPNIVRLLGVCRE 560 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEcc
Confidence 34556778999999999999998643 34679999986543 3446788999999999999 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG--------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
++.+|+|+|||..|||.++|.... +++..+...|+.||+.|++||-++.+|||||-..|+|| +
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---g 637 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---G 637 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---c
Confidence 999999999999999999996431 27889999999999999999999999999999999999 6
Q ss_pred CCCCeeEeecccceecCCCCccccC---CCCccccccccc-cccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
++..|||+|||+++.+...+.+.-. .-..+|||||.+ -+.++.+|||||+||+|||+++ |..||.+.+.+++++.
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~ 717 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIEC 717 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHH
Confidence 7889999999999987655543322 235689999976 4789999999999999999997 9999999999999999
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHh
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 322 (480)
+..+.. ++. ..+.|.++.+|+..||+.+|.+||++.||-
T Consensus 718 i~~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 718 IRAGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHcCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999887 333 257999999999999999999999999984
|
|
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=314.77 Aligned_cols=242 Identities=25% Similarity=0.350 Sum_probs=201.1
Q ss_pred ceecccCCeEEEEEEE--cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+.||+|+||.||+|.+ ..++..+|+|++.... ......+.+.+|+.+++.+. ||||+++++++. ....++||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~ 77 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELA 77 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecC
Confidence 3689999999999965 4567899999986432 23344577899999999997 999999999875 45678999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc---
Q 011647 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (480)
Q Consensus 151 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~--- 227 (480)
++++|.+++...+.+++..+..++.|++.||.|||++||+||||||.||+++ .++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCCCCeeee
Confidence 9999999998888899999999999999999999999999999999999994 4677999999999865433221
Q ss_pred -ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 228 -KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 228 -~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
....++..|+|||.+.. .++.++|||||||++|||++ |..||...........+..+... + ....+++++.++|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~-~--~~~~~~~~l~~li 231 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM-E--CPQRCPPEMYDLM 231 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC-C--CCCCCCHHHHHHH
Confidence 12234578999998864 57889999999999999998 99999888777777776654321 1 2246899999999
Q ss_pred HHhcccCcCCCCCHHHHhc
Q 011647 305 KKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~ 323 (480)
.+||+.||++||++++|.+
T Consensus 232 ~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 232 KLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHhccCchhCcCHHHHHH
Confidence 9999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=326.17 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=203.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCce----EEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.+|++.+.||+|+||+||+|.+..++.. ||+|.+... ......+.+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-C
Confidence 4699999999999999999998766553 899988532 22334567889999999998 99999999998764 5
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++|+||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccc
Confidence 67999999999999998774 468999999999999999999999999999999999999 45667999999999876
Q ss_pred CCCCcc---ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
...... ....++..|+|||++. ..++.++||||||+++|+|++ |..||.+....+....+... ...+. .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~ 236 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLPQ--PPIC 236 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-CCCCC--CCCC
Confidence 533221 1223466899999876 458999999999999999997 99999887766654444332 22222 2457
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.++.+++.+||..+|.+||++.+++.+
T Consensus 237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 237 TIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=321.84 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=207.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCC----------------ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTK----------------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (480)
..+|++.+.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+++++++. |||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~ 80 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLS-DPN 80 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcC-CCC
Confidence 357999999999999999999876543 568999986442 2345678899999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcc
Q 011647 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (480)
Q Consensus 130 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N 198 (480)
|+++++++..++..++||||+.+++|.+++.... .+++..++.++.|++.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999987765 68999999999999999999999999999999999
Q ss_pred eecccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh--CCCCCCCC
Q 011647 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS--GVPPFWGE 272 (480)
Q Consensus 199 il~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt--g~~pf~~~ 272 (480)
|+++ .++.++|+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...
T Consensus 161 ili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 161 CLVG---KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eeec---CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9994 457899999999886543321 223456778999998764 68999999999999999998 77888777
Q ss_pred ChHHHHHHHHcC----CCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 273 TEQSIFDAILRG----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 273 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+..+... .........+.++.++.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 666665555432 111111122356799999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=324.35 Aligned_cols=257 Identities=29% Similarity=0.517 Sum_probs=208.3
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC---
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--- 141 (480)
..++|.+.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|+.++++++ ||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhh
Confidence 45679999999999999999999999999999999864322 2223356788999999998 999999999887654
Q ss_pred -------eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 142 -------SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 142 -------~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
.+++|+||+++ ++...+... ..+++..+..++.||+.||.|||+.||+|+||||+||++ ++++.+||+
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~ 158 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLA 158 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeC
Confidence 79999999976 777766653 469999999999999999999999999999999999999 456779999
Q ss_pred ecccceecCCCC--ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 214 DFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 214 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|++||........+..+........
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC 238 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999998754332 1223356788999998753 368899999999999999999999987766555544433111000
Q ss_pred --------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 290 --------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 290 --------------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
...+..+|..+.++|.+||..||.+|||+.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 01123578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=315.26 Aligned_cols=243 Identities=25% Similarity=0.432 Sum_probs=209.2
Q ss_pred ceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEec
Q 011647 73 RELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 149 (480)
+.||+|+||.||+|.+... +..||+|++..... ....+.+.+|+.++..+. |+||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 4699999999999999866 88999999865432 224678999999999998 99999999999999999999999
Q ss_pred CCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 150 CAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 150 ~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++ .++.++|+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccccccc
Confidence 9999999999875 7799999999999999999999999999999999999994 567899999999987
Q ss_pred cCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 221 FKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 221 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... ......+++.|+|||.+.. .++.++||||||+++|+|++ |..||...........+..+... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 231 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL---PKPEY 231 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCcc
Confidence 65432 2234567889999998864 58899999999999999999 69999988887777777653221 22246
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+++++.+++.+||..+|++|||+.+++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 78999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=314.23 Aligned_cols=246 Identities=22% Similarity=0.406 Sum_probs=206.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|.+.+.||+|+||+||+|.+.. +..+|+|.+..... ..+.+.+|+.+++++. ||||+++++++......++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEE
Confidence 468999999999999999998765 45699998864322 2366889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+.+++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++ .++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecCCCc
Confidence 9999999999988764 4689999999999999999999999999999999999994 56779999999988654332
Q ss_pred cc--ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 VF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.. ....++..|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKVY 231 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHHH
Confidence 21 12235567999999864 58899999999999999998 99999887777777777665433222 34689999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+++.+||..+|.+||++.+++++
T Consensus 232 ~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 232 AIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHcCCCcccCCCHHHHHHh
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=315.31 Aligned_cols=249 Identities=22% Similarity=0.391 Sum_probs=208.1
Q ss_pred cceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
++|++.+.||+|+||+||+|.++.+ ...||||.+.... .......+.+|+.+++++. ||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCce
Confidence 4689999999999999999998654 4579999886432 3334567889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++||+|+||||+||++ ++++.++|+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence 9999999999999998764 468999999999999999999999999999999999999 456779999999998764
Q ss_pred CC-Cccc--cCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PG-DVFK--DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~-~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. .... ...++..|+|||.+.+ .++.++||||||+++|+|++ |..||...........+...... + ....++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~ 234 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL-P--PPMDCP 234 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-C--CCCCCC
Confidence 21 1111 2234578999998864 58899999999999999998 99999887777777666554221 1 124678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..+.+++.+||+.+|++||++.+++++
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=329.45 Aligned_cols=264 Identities=30% Similarity=0.487 Sum_probs=212.2
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--C
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--H 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~ 141 (480)
.+.++|.+.+.||+|+||.||+|.+..++..||+|.+.... ........+.+|+.+++++.+||||+++++++... .
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 45678999999999999999999999889999999885432 22334466778999999994499999999988643 4
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++||||+. ++|.+++... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSL 157 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhcc
Confidence 6899999996 5898887665 78999999999999999999999999999999999999 56778999999998865
Q ss_pred CCCC------ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC--------
Q 011647 222 KPGD------VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------- 285 (480)
Q Consensus 222 ~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~-------- 285 (480)
.... ......|++.|+|||++.+ .++.++||||||+++|+|++|+.||.+.........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 4322 2234568999999998743 47889999999999999999999998766544333322111
Q ss_pred -------------------CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 286 -------------------IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 286 -------------------~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
........+.++.++.++|.+||+.||++|||+.++++||||+.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 001111234578999999999999999999999999999999765443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=320.85 Aligned_cols=253 Identities=32% Similarity=0.523 Sum_probs=208.5
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|.+.+.||+|++|+||+|....+++.||||.+..... . .......+|+..+.++.+||||+++++++.+++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999999999999999864322 1 1223455789999999879999999999999999999999
Q ss_pred cCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 149 LCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|+ +++|.+.+.... .+++..+..++.|++.+|.|||++|++|+||+|+||++ +.++.++|+|||++........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence 99 789998887764 78999999999999999999999999999999999999 4567799999999987655444
Q ss_pred cccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc-----------------
Q 011647 227 FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID----------------- 287 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~----------------- 287 (480)
.....|+..|+|||++.+ .++.++|+||||+++++|++|.+||......+....+......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 455678999999998743 4788999999999999999999999877654444333211000
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 --FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 --~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++ ....+..+.++.++|.+||+.+|++|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00 00122346889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=322.34 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=206.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCC-------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT-------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
.++|.+++.||+|+||.||+|.+... ...+|+|.+.... .......+.+|+.+++++.+||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 46799999999999999999987432 3469999986532 23345678889999999966999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 202 (480)
..+..++||||+.+++|.+++...+ .+++..+..++.|++.||+|||++|++||||||+||+++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999999999997542 488899999999999999999999999999999999994
Q ss_pred cCCCCCCeeEeecccceecCCCCcc---ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 011647 203 SSAEDSPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSI 277 (480)
Q Consensus 203 ~~~~~~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~ 277 (480)
.++.+||+|||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.
T Consensus 175 ---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 175 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred ---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 5677999999998765432211 12234568999998764 58899999999999999998 8899988777776
Q ss_pred HHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
...+..... ......++.++.+++.+||..+|++|||+.+++++
T Consensus 252 ~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 252 FKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 666655432 12224678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=314.07 Aligned_cols=251 Identities=27% Similarity=0.484 Sum_probs=215.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++++. ||||+++++++......++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 48889999999999999999999999999999865433 2334567788999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 148 DLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 148 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhcc
Confidence 99999999988865 35689999999999999999999999999999999999995 466799999999987654
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||...+.......+......... ..++.++.+
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP---PIYSQDLQN 231 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---hhhCHHHHH
Confidence 4 3334568899999998864 4788999999999999999999999888877666666554432211 367899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++.+||+.+|++|||+.++++||++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-43 Score=307.79 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=213.3
Q ss_pred eecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEec
Q 011647 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 149 (480)
+-...||.|+||+|++..++.+|+..|||.++... ...+.+++..|.....+-.++||||++|+....++..+|.||+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34467999999999999999999999999997543 3455678999999888888899999999999999999999999
Q ss_pred CCCCchHHHH-----HhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 150 CAGGELFDRI-----IAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 150 ~~~~~L~~~l-----~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
| ..+|..+. ..+..++|..+..|....+.||+||-+ ..||||||||+|||+ +..|.|||||||++-.+..
T Consensus 145 M-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 145 M-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred H-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHH
Confidence 9 44664332 235679999999999999999999985 589999999999999 5677799999999987655
Q ss_pred CCccccCCCCcccccccccc---ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHcCCCcCCCCCC--CCCC
Q 011647 224 GDVFKDLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPW--PNIS 297 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 297 (480)
+-..+.-.|...|||||.+. .+|+-+|||||||++|||+.||..||.+-. -.+.+..+..+.++...... -.++
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s 300 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYS 300 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccC
Confidence 44445567999999999885 348999999999999999999999996633 33444455556554433322 2478
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
..+..+|..||.+|-++||...+++++||.+......
T Consensus 301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 301 FSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred HHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 9999999999999999999999999999999775543
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=313.94 Aligned_cols=246 Identities=23% Similarity=0.393 Sum_probs=206.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|++.++||+|+||.||+|.... +..||+|.+.... ...+.+.+|+.+++++. ||||+++++.+...+..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT----MSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc----hhHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEE
Confidence 3679999999999999999999754 5679999875432 23577899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIED 155 (261)
T ss_pred EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCC
Confidence 99999999999988653 468899999999999999999999999999999999999 4567799999999987643
Q ss_pred CCc--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||...........+..... .+....++.+
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR---MPRMENCPDE 232 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHH
Confidence 221 122345678999998864 57889999999999999998 9999988877777766655422 2223468899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.+++.+||..+|++||+++++++
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 233 LYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=320.67 Aligned_cols=257 Identities=26% Similarity=0.457 Sum_probs=213.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|...+.||+|+||.||+|++..++..+|+|.+.............+.+|+.+++.+. |||++++++++......+
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeE
Confidence 3456888899999999999999999999999999986543333344567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+. ++|.+.+.. ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||++.....
T Consensus 92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccceeecC
Confidence 9999996 577776654 45689999999999999999999999999999999999994 467799999999876543
Q ss_pred CCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
. ....|++.|+|||.+. +.++.++|||||||++|+|++|..||...........+...... ......++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (308)
T cd06634 168 A---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--ALQSGHWSEY 242 (308)
T ss_pred c---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCC--CcCcccccHH
Confidence 2 3456889999999873 34788999999999999999999999776655444444433322 1122357889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.++|.+||..+|++||++.++++|||+....
T Consensus 243 ~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred HHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 99999999999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=320.13 Aligned_cols=249 Identities=22% Similarity=0.372 Sum_probs=207.8
Q ss_pred cceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..|.+.+.||+|+||+||+|.+..+ +..||+|++.... .....+.+.+|+.++..+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCC
Confidence 4588899999999999999987543 5789999986432 2233467889999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 142 SVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
..++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++.
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~--- 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF--- 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---
Confidence 999999999999999988532 3478889999999999999999999999999999999994
Q ss_pred CCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
+++.+||+|||+++....... .....+++.|+|||++. +.++.++|||||||++|||++ |..||.+....+....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 566799999999886543221 12345678899999875 568899999999999999998 8899988888888777
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+........ ...++..+.+++.+||+.+|.+||++.+++..
T Consensus 239 i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 239 IRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 776554321 24688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=351.38 Aligned_cols=257 Identities=29% Similarity=0.473 Sum_probs=205.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.....|...+.||+||||.||+++++-+|+.||||.|.... ......++.+|++.|++|. |||||+++..|.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCc
Confidence 34567888999999999999999999999999999997654 4455678999999999999 99999998643100
Q ss_pred --------------------------------------------------------------------------------
Q 011647 141 -------------------------------------------------------------------------------- 140 (480)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (480)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ------------------------------------CeEEEEEecCCCCchHHHHHhcCCC-CHHHHHHHHHHHHHHHHH
Q 011647 141 ------------------------------------HSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHY 183 (480)
Q Consensus 141 ------------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~i~~qi~~~l~~ 183 (480)
..+||-||||+..+|.+++..+... ....+++++++|++||.|
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 1367899999886666666555443 477899999999999999
Q ss_pred HHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC------------------CC-CccccCCCCccccccccccc
Q 011647 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK------------------PG-DVFKDLVGSAYYVAPEVLRR 244 (480)
Q Consensus 184 lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~------------------~~-~~~~~~~gt~~y~aPE~~~~ 244 (480)
+|+.|||||||||.||+++ .+..|||+|||+|.... .+ ...+..+||.-|+|||++.+
T Consensus 713 IH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9999999999999999994 66779999999998721 01 13456789999999999853
Q ss_pred ----cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 011647 245 ----NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319 (480)
Q Consensus 245 ----~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 319 (480)
.|+.|+|+||||+||+||+. ||...-+ ...+..+..+.++.+...+..--+.-..+|++||+.||.+||||.
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~ 866 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT 866 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence 48999999999999999995 6755433 344555555655555333333445667899999999999999999
Q ss_pred HHhcCCcccc
Q 011647 320 EVLNHPWMRV 329 (480)
Q Consensus 320 ~~l~h~~~~~ 329 (480)
|+|++.||-.
T Consensus 867 eLL~s~llpp 876 (1351)
T KOG1035|consen 867 ELLNSELLPP 876 (1351)
T ss_pred HHhhccCCCc
Confidence 9999999985
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=315.71 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=202.2
Q ss_pred eeecceecccCCeEEEEEEEcCCCc--eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC------
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR------ 140 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~------ 140 (480)
|.+++.||+|+||.||+|.+..++. .||+|.+.... ......+.+.+|+.+++.++ ||||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCC
Confidence 3567899999999999999887765 69999886532 23445678899999999997 99999999976422
Q ss_pred CeEEEEEecCCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 141 HSVNLIMDLCAGGELFDRIIA------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
...++||||+.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 246899999999999887742 2348899999999999999999999999999999999999 4567799999
Q ss_pred cccceecCCCCcc---ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 215 FGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 215 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
||++......... ....+++.|+|||.+.+ .++.++||||||+++|+|++ |..||.+.........+..+....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~- 234 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLK- 234 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence 9999876433211 12245678999998864 58899999999999999999 899998877777777666543321
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..+.++..+.++|.+||+.||++|||+.+++++
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 --QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 124678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=331.16 Aligned_cols=251 Identities=24% Similarity=0.429 Sum_probs=212.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCC----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
++-.+.++||+|+||.||+|..+..+ ..||||............+..+.+|++++++++ |||||++||+......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCc
Confidence 44556799999999999999987542 238999987645556778899999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
++||||+|.||+|.++|.+.+ .++..+...++.+.+.||+|||++++|||||-..|+|+ ..+..+||+|||+++..
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCCCeEEeCccccccCC
Confidence 999999999999999999887 49999999999999999999999999999999999999 45566899999998864
Q ss_pred CCCCccccC-CCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 222 KPGDVFKDL-VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 222 ~~~~~~~~~-~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
......... --...|+|||.+.. -++.++|||||||++||+++ |..||.+....+....+.......+.+ ...|.
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~~p~ 390 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--SKTPK 390 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC--CCCHH
Confidence 311111111 23467999999864 59999999999999999998 888999999999998886655443332 36788
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++..++.+|+..+|++|||+.++.+
T Consensus 391 ~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 391 ELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHhccCChhhccCHHHHHH
Confidence 9999999999999999999999875
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=324.38 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=204.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC-----
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR----- 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~----- 140 (480)
.++|.+.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|++++++++ ||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-KDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC-CCCcchhHHHHHHHHHhcC-CCCccchhhheeccccccc
Confidence 4689999999999999999999999999999999864332 1122345678999999998 99999999877433
Q ss_pred ---CeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
..+++||||+.+ +|...+.. ...+++..+..++.||+.||.|||++||+|+||||+||++ +.++.++|+|||
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg 160 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFG 160 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCc
Confidence 357999999965 67676654 4579999999999999999999999999999999999999 456789999999
Q ss_pred cceecCCCCc------------cccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 011647 217 LSVFFKPGDV------------FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282 (480)
Q Consensus 217 ~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~ 282 (480)
++........ .....|++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+.+.......+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9876532211 123457888999998754 47889999999999999999999998877665544433
Q ss_pred cCCCcCCC--------------------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 283 RGHIDFSS--------------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 283 ~~~~~~~~--------------------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
........ ..+..+++++.++|.+||..||.+|||+.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 21100000 0123455788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=320.27 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=208.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.++.++.+||||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 346799999999999999999998643 3689999986432 233456788999999999559999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceeccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 203 (480)
++.+++||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~-- 165 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV-- 165 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE--
Confidence 99999999999999999988642 458899999999999999999999999999999999999
Q ss_pred CCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011647 204 SAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278 (480)
Q Consensus 204 ~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~ 278 (480)
+.++.+||+|||+++....... .....++..|+|||++. ..++.++|||||||++|+|++ |..||.+....+..
T Consensus 166 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 244 (293)
T cd05053 166 -TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 244 (293)
T ss_pred -cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH
Confidence 4567899999999987643321 11223566799999875 458899999999999999997 99999888777777
Q ss_pred HHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..+...... . .....+.++.+|+.+||..||++|||+.+++++
T Consensus 245 ~~~~~~~~~-~--~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 245 KLLKEGYRM-E--KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHcCCcC-C--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 666554321 1 223578999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=319.63 Aligned_cols=252 Identities=27% Similarity=0.412 Sum_probs=205.2
Q ss_pred cccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+.+.||+|+||.||+|.+. .++..||+|.+.... .....+.+.+|+.+++++.+||||+++++++..
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 3467999999999999999999863 345689999886432 233456789999999999559999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+..++||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+|+||||+|||+ +.++.++|+|||+
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~ 187 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGL 187 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCcc
Confidence 999999999999999999987643 38999999999999999999999999999999999999 4567799999999
Q ss_pred ceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 218 SVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 218 a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
+........ .....++..|+|||++.+ .++.++||||+||++|+|++ |..||.................... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~ 265 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA--Q 265 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC--C
Confidence 886543221 122346778999998754 58899999999999999998 9999987665544433333222221 2
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
....++++.+++.+||..+|++|||+.++++
T Consensus 266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2357899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=322.22 Aligned_cols=264 Identities=33% Similarity=0.530 Sum_probs=212.0
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-CCe
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHS 142 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-~~~ 142 (480)
.+.++|.+.+.||.|+||.||+|.+..+++.||+|.+.+.. ......+.+.+|+.+++++. ||||+++++++.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCc
Confidence 45678999999999999999999999999999999886432 22234467889999999998 9999999998865 567
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.++||||+ +++|.+++. ...+++..+..++.||+.||.|||++||+||||+|+||++ +.++.++|+|||.+....
T Consensus 85 ~~lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQD 159 (328)
T ss_pred EEEEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccC
Confidence 89999999 568877665 4568999999999999999999999999999999999999 456779999999987543
Q ss_pred CCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC----------------
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG---------------- 284 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~---------------- 284 (480)
. ......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+...
T Consensus 160 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd07856 160 P--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN 237 (328)
T ss_pred C--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchh
Confidence 2 2234567889999998754 4789999999999999999999999776543322211110
Q ss_pred ----------CCcCC-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCC
Q 011647 285 ----------HIDFS-SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336 (480)
Q Consensus 285 ----------~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~ 336 (480)
....+ ....+.++.++.++|.+||+.+|++|||+++++.||||+....+-..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccc
Confidence 00000 01124578899999999999999999999999999999876555433
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=315.04 Aligned_cols=248 Identities=22% Similarity=0.361 Sum_probs=203.8
Q ss_pred eeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe---
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS--- 142 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~--- 142 (480)
|.+++.||+|+||.||+|....+ +..||+|.+..... .....+.+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCcccc
Confidence 56789999999999999997653 47899999865322 3344577899999999998 9999999998765544
Q ss_pred ---EEEEEecCCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 143 ---VNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 143 ---~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
.++||||+++++|..++... ..+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence 78999999999998887542 358999999999999999999999999999999999999 456779999
Q ss_pred ecccceecCCCCcc---ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcC
Q 011647 214 DFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 214 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|||+++........ ....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+....+..+.+..+....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99999876433211 12235678999998864 58899999999999999999 999998888777777666543221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
....++.++.+++.+||..||++|||+.+++++
T Consensus 236 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 236 ---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 224678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=311.98 Aligned_cols=246 Identities=23% Similarity=0.373 Sum_probs=206.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||.||+|.+.. ++.||+|.+.... ...+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGT----MDPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCc----ccHHHHHHHHHHHHHCC-CCCccceeEEEecCCCee
Confidence 34679999999999999999999764 5789999986532 22466889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|+|||++....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIK 154 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEcc
Confidence 9999999999999987654 689999999999999999999999999999999999994 56779999999998765
Q ss_pred CCCccccCCC---Cccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PGDVFKDLVG---SAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~~~~~~~~g---t~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.... ....| +..|+|||++.+ .++.++||||||+++|+|++ |+.||.+.........+..... .+ ....++
T Consensus 155 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~ 230 (261)
T cd05068 155 EDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-MP--CPPGCP 230 (261)
T ss_pred CCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CC--CCCcCC
Confidence 3221 12222 357999998764 58889999999999999999 9999988887777766654422 11 224678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..+.+++.+||+.+|++||++.++++
T Consensus 231 ~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 231 KELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 99999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=315.85 Aligned_cols=249 Identities=22% Similarity=0.378 Sum_probs=207.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.++|.+.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCC
Confidence 46799999999999999999998654 3789999975432 2233467889999999997 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCe
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
...++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCE
Confidence 9999999999999999988643 236788999999999999999999999999999999999 456779
Q ss_pred eEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCC
Q 011647 211 KATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~ 285 (480)
||+|||+++....... .....++..|+|||.+. +.++.++|||||||++|++++ |..||...+.......+....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence 9999999876543321 12345678899999875 458899999999999999998 999998888777777666432
Q ss_pred CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.. . ....++.++.+++.+||+.+|++|||+.++++
T Consensus 239 ~~-~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 HL-D--LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CC-C--CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 21 1 12346899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=318.12 Aligned_cols=247 Identities=24% Similarity=0.415 Sum_probs=206.1
Q ss_pred cceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+|.+.+.||+|+||.||+|.+.. ++..+++|.+... .....+.+.+|+.+++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCC
Confidence 468899999999999999998643 4566899987532 2233467889999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
..++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||++ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---G 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---c
Confidence 9999999999999999987542 38899999999999999999999999999999999999 4
Q ss_pred CCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
.++.++|+|||++........ .....|+..|+|||++.+ .++.++||||||+++|+|++ |..||......+....
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 567899999999876543221 123456788999998764 57889999999999999998 9999988887777776
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+..+..... ....|..+.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 238 ITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 655443321 2356889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=327.16 Aligned_cols=259 Identities=30% Similarity=0.486 Sum_probs=207.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+..+|.+.+.||+|+||.||+|.+..+++.||||.+.... ........+.+|+.+++++. ||||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSGD 90 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-ccccchhHHHHHHHHHHhcC-CCCccchhheecccccCC
Confidence 3468999999999999999999999999999999986532 12233456889999999997 99999999988654
Q ss_pred --CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 --HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..+++|+||+.. +|...+ ...+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLA 164 (342)
T ss_pred CCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCCC
Confidence 346899999954 676554 34689999999999999999999999999999999999994 5677999999998
Q ss_pred eecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC-----------
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------- 285 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~----------- 285 (480)
..... ......|++.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+....
T Consensus 165 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T cd07879 165 RHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL 242 (342)
T ss_pred cCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 76432 2234568899999998754 47889999999999999999999998876544443332210
Q ss_pred ------------CcCCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 286 ------------IDFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 286 ------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
...+.. .++..++++.+||.+||+.||++||++.+++.||||+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 243 EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred cccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 000111 124578889999999999999999999999999999866543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=311.60 Aligned_cols=246 Identities=25% Similarity=0.453 Sum_probs=204.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.+|++.+.||+|+||.||+|.++. +..+|+|++..... ....+.+|+.+++++. ||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEE
Confidence 358899999999999999998864 66899998864322 2356788999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||++|++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||+++ .++.+||+|||+++......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceeccccc
Confidence 9999999999998763 4689999999999999999999999999999999999994 56779999999987654322
Q ss_pred ccc--cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 VFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
... ...++..|+|||.+. ..++.++||||||+++|+|++ |..||......+....+..... .. .....+.++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 231 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR-LY--RPKLAPTEVY 231 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-CC--CCCCCCHHHH
Confidence 111 112345799999886 458899999999999999998 8999988777777666654422 11 1235789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+++.+||..+|++|||+.++++.
T Consensus 232 ~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 232 TIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=320.19 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=206.5
Q ss_pred cccceeecceecccCCeEEEEEEEcC-------CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
...+|.+++.||+|+||.||+|.+.. ....||+|.+.... .......+.+|+.+++++.+||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 34689999999999999999998642 34579999886432 2344567889999999996699999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
...+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 9999999999999999999998653 348889999999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+ .++.+||+|||+++....... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+....+
T Consensus 168 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 168 T---EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred c---CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 4 567799999999986543221 112234567999998754 58899999999999999999 899998887777
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
....+...... .....++.++.+++.+||..+|++|||+.++++
T Consensus 245 ~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 245 LFKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 77766554321 122467889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=313.82 Aligned_cols=243 Identities=26% Similarity=0.369 Sum_probs=198.0
Q ss_pred ceecccCCeEEEEEEEcCCCc--eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+.||+|+||.||+|.+..++. .+|+|.+... ......+.+.+|+.++.++.+||||+++++++...+.+++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999988775 4688877532 233445678899999999966999999999999999999999999
Q ss_pred CCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 151 AGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 151 ~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
++++|.+++...+ .+++..+..++.|++.||+|||++|++||||||+||++ +.++.+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECC
Confidence 9999999987543 47899999999999999999999999999999999999 4567799999
Q ss_pred cccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
||++..............+..|+|||++.. .++.++||||||+++|+|++ |..||.+.+.......+..... ...
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---~~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR---LEK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC---CCC
Confidence 999864321111111233567999998854 58889999999999999997 9999988777776666644321 112
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...++.++.+++.+||..+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2357889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=312.16 Aligned_cols=245 Identities=23% Similarity=0.408 Sum_probs=203.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||.||+|.+..+ ..||+|++..... ..+.+.+|+.+++++. ||||+++++.+. ....++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVS-EEPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCC-CCCcceEEEEEC-CCCcEE
Confidence 46799999999999999999998765 4699999864322 2357889999999998 999999999875 456899
Q ss_pred EEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++ +++.++|+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIED 154 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeeccc
Confidence 99999999999998753 3589999999999999999999999999999999999994 567799999999986643
Q ss_pred CCcc--ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDVF--KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.... ....++..|+|||++. +.++.++||||||+++|+|++ |..||.+.........+..... .+ ....++..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 231 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MP--CPPECPES 231 (262)
T ss_pred cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-CC--CccccCHH
Confidence 3221 2234667899999875 458999999999999999999 8889988877776666654322 11 12467899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.+++.+||+++|++||++.++++
T Consensus 232 l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 232 LHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHccCCcccCCCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=320.04 Aligned_cols=256 Identities=31% Similarity=0.546 Sum_probs=209.2
Q ss_pred ceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCC-hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLIN-RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.|.+.+.||+|+||.||++.+. .++..||||++.+..... ....+.+.+|+.++.++.+||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3788999999999999999864 457889999986533222 223466889999999997799999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+.+++|.+.+...+.+++..+..++.|++.||.|||+.|++||||||.||+++ .++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECcccccccc
Confidence 99999999999999998878899999999999999999999999999999999999994 567799999999876543
Q ss_pred CCc--cccCCCCcccccccccccc---CCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcCCCcCCCCCCC
Q 011647 224 GDV--FKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~ 294 (480)
... .....|+..|+|||.+.+. .+.++||||||+++|+|++|..||.... .......+....... ..
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~ 233 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF----PK 233 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC----Cc
Confidence 321 1234689999999987542 6789999999999999999999996432 223333333332222 23
Q ss_pred CCCHHHHHHHHHhcccCcCCCCC---HHHHhcCCccccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRVD 330 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t---~~~~l~h~~~~~~ 330 (480)
.++..+.++|.+||+.||++||| +.++|+||||+..
T Consensus 234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 57899999999999999999998 5677999999754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=310.34 Aligned_cols=241 Identities=23% Similarity=0.353 Sum_probs=200.6
Q ss_pred ceecccCCeEEEEEEEcCCC---ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEec
Q 011647 73 RELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 149 (480)
+.||+|+||.||+|.+...+ ..||+|.+...... ...+.+.+|+.+++++. ||||+++++++. ....++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEe
Confidence 47999999999999876544 78999998754432 34567889999999998 999999999875 5568999999
Q ss_pred CCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc--
Q 011647 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-- 227 (480)
Q Consensus 150 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~-- 227 (480)
+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.+||+|||++.........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeecCCcccc
Confidence 99999999998888899999999999999999999999999999999999994 5677999999999866433221
Q ss_pred --ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 228 --KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 228 --~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
....++..|+|||.+.+ .++.++||||||+++|++++ |..||......+....+...... .....++..+.++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l 230 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPEECPQEIYSI 230 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHH
Confidence 11123467999998764 58899999999999999998 99999888777776666554321 2234678999999
Q ss_pred HHHhcccCcCCCCCHHHHhc
Q 011647 304 VKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~ 323 (480)
|.+||..+|++||++.++++
T Consensus 231 i~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 231 MLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=314.22 Aligned_cols=247 Identities=22% Similarity=0.325 Sum_probs=203.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.+|.+.+.||+|+||+||+|.+..++. .||+|.+.... .......+.+|+.+++.+. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVG-SPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC-CC
Confidence 578999999999999999999877665 48999885432 3334567889999999998 9999999999865 45
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++++||+++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+. +++.+||+|||+++..
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCceeec
Confidence 78999999999999998764 5699999999999999999999999999999999999994 4667999999999876
Q ss_pred CCCCcc---ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
...... ....+++.|+|||.+. ..++.++|||||||++|||++ |..||...........+...... + .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~ 236 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL-P--QPPIC 236 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-C--CCccC
Confidence 432221 1223467899999875 458899999999999999998 99999877766665555443322 1 22467
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.++.+++.+||..||++||++.++++
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=314.53 Aligned_cols=245 Identities=29% Similarity=0.479 Sum_probs=200.2
Q ss_pred eecceecccCCeEEEEEEEc----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 70 IFGRELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.+.||.|+||.||+|... ..+..|+||.+... ......+.+.+|++.+++++ ||||+++++++...+..++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccc-ccccccccccccccccccc
Confidence 35689999999999999988 34678999998542 23445788999999999996 9999999999998888999
Q ss_pred EEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|||||++|+|.+++... ..+++..+..|+.||+.||.|||+++++|++|+++||+++ .++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence 99999999999999886 6799999999999999999999999999999999999995 466799999999987632
Q ss_pred CCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 224 GDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 224 ~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
... .....+...|+|||.+.. .++.++||||||+++||+++ |..||...........+..+.... ....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---IPDNCPK 232 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT---SBTTSBH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce---eccchhH
Confidence 221 122346778999999865 48999999999999999999 789998888888777775554322 1246789
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+.++|.+||..||++|||+.++++
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999999999999999999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=326.13 Aligned_cols=261 Identities=28% Similarity=0.447 Sum_probs=208.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|+.++++++ ||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 91 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecccc
Confidence 45688999999999999999999999999999999986432 12233466888999999998 99999999987543
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...+++++++ +++|.+.+.. ..+++..++.++.|++.||.|||+.||+||||||+||+++ .++.+||+|||+
T Consensus 92 ~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGL 166 (345)
T ss_pred cccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEecccc
Confidence 3478888887 7799776654 4699999999999999999999999999999999999994 566799999999
Q ss_pred ceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC---------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------- 286 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~--------- 286 (480)
+..... ......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+.....
T Consensus 167 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 167 ARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred cccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 876432 2334578999999998754 478899999999999999999999976655443333221100
Q ss_pred --------------cCCC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 287 --------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 287 --------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
..+. ..+...++++.++|.+||+.||.+||++.++++||||+....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence 0001 0112457889999999999999999999999999999865443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=313.58 Aligned_cols=248 Identities=24% Similarity=0.392 Sum_probs=209.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|.+.+.||.|+||.||+|.+.. +..+|+|++.... ......+.+|+.+++.++ ||||+++++++......+
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVY 78 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeE
Confidence 34679999999999999999999988 8899999986532 223567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+++++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIK 155 (261)
T ss_pred EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcC
Confidence 999999999999998753 4589999999999999999999999999999999999994 56779999999997654
Q ss_pred CCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 223 PGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 223 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||......+.+..+..... . +....+++.
T Consensus 156 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 232 (261)
T cd05148 156 EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-M--PCPAKCPQE 232 (261)
T ss_pred CccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-C--CCCCCCCHH
Confidence 3221 123345678999998754 58889999999999999998 8999988877777776664321 1 222467899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.+++.+||+.||.+|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 233 IYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=317.71 Aligned_cols=253 Identities=32% Similarity=0.550 Sum_probs=209.5
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|.+.+.||.|++|.||+|.+..+++.+++|.+..... .......+.+|+.+++++. ||||+++++++..+..+++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5678899999999999999998999999999865432 2234567889999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-c
Q 011647 149 LCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (480)
Q Consensus 149 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-~ 226 (480)
|+++ +|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||.+....... .
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecCCCccc
Confidence 9975 88887766 45799999999999999999999999999999999999994 56779999999998765443 2
Q ss_pred cccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc-----------------
Q 011647 227 FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID----------------- 287 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~----------------- 287 (480)
.....++..|+|||.+.+ .++.++|+||||+++|+|++|+.||...+..+....+......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 334568889999998753 4788999999999999999999999877765544443221100
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 288 --FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 288 --~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++ ...++.++.++.++|.+||.+||.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00 01123568899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=303.02 Aligned_cols=263 Identities=28% Similarity=0.485 Sum_probs=214.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE------
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE------ 138 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~------ 138 (480)
..+.|.-..+||+|.||.||+|+.+.+++.||+|++...... ...-....+|+++|..|. |+|++.+++.|.
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKATPT 92 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCc
Confidence 346788889999999999999999999999999876542211 111245678999999998 999999988763
Q ss_pred --eCCeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 139 --DRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 139 --~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
+...+|+||.+|+. +|..++... .+++..++.+++.++..||.|+|+..|+|||+|++|+|| +.++.+||+||
T Consensus 93 ~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADF 168 (376)
T KOG0669|consen 93 NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADF 168 (376)
T ss_pred ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeecc
Confidence 23458999999965 888887655 579999999999999999999999999999999999999 56788999999
Q ss_pred ccceecCCCC-----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC
Q 011647 216 GLSVFFKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 216 g~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|+++.+.... .++..+.|.+|.+||.+-| .|+++.|||..||++.+|.+|.+-+.++++...+..|..-...+
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 9997654222 2345677999999998865 59999999999999999999999999999988777765433333
Q ss_pred CCCCCCCC-------------------------------CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 289 SSDPWPNI-------------------------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 289 ~~~~~~~~-------------------------------~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
....||++ .+++.+|+.++|..||.+|+++.++|+|.||..+..+
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 33333321 3478899999999999999999999999999877654
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=314.41 Aligned_cols=247 Identities=21% Similarity=0.391 Sum_probs=205.5
Q ss_pred cceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+|.+.++||+|+||.||++... .++..+|+|.+... .....+.+.+|+++++.+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCC
Confidence 56888999999999999999753 34668999987532 3344577999999999997 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG---------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 206 (480)
..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+|||++ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---Q 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---C
Confidence 9999999999999999887643 488999999999999999999999999999999999994 5
Q ss_pred CCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011647 207 DSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281 (480)
Q Consensus 207 ~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~ 281 (480)
++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||...........+
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 67899999999876543221 122345678999998764 58899999999999999998 99999887777766666
Q ss_pred HcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..+.... ....+++.+.++|.+||+.||.+||+++++++
T Consensus 238 ~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 5543221 12467899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=317.85 Aligned_cols=252 Identities=24% Similarity=0.399 Sum_probs=208.1
Q ss_pred cccceeecceecccCCeEEEEEEEc-------CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-------DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
...+|.+.+.||+|+||.||+|++. ..+..||+|.+.... .......+.+|+.+++.+.+||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 3567999999999999999999753 234579999886432 2344577899999999995599999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
......++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 9999999999999999999998764 247788899999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+ .++.+||+|||+++....... .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.+..+
T Consensus 171 ~---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 171 T---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred c---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 4 567799999999987643221 122345678999998854 58899999999999999998 889998888877
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
....+....... ....++.++.+++.+||..+|.+|||+.++++.
T Consensus 248 ~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 248 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 777765543221 124678999999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=317.54 Aligned_cols=253 Identities=31% Similarity=0.530 Sum_probs=209.9
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|++.+.||+|++|.||+|....+++.||+|++.... ......+.+.+|+.+++++. ||||+++++++.+...+++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 567789999999999999999999999999987543 22333467788999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-c
Q 011647 149 LCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (480)
Q Consensus 149 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-~ 226 (480)
|+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||++ ++++.++|+|||++....... .
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccc
Confidence 997 5899998876 579999999999999999999999999999999999999 456789999999988754332 2
Q ss_pred cccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC------------------C
Q 011647 227 FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------------------I 286 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~------------------~ 286 (480)
.....++..|+|||.+.+ .++.++||||||+++|++++|.+||........+..+.... .
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 334456788999998753 57889999999999999999999998877655444332210 0
Q ss_pred cCC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 287 DFS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 287 ~~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.++ ...++.++..+.++|.+||..||++||+++++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01234567899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=311.59 Aligned_cols=248 Identities=22% Similarity=0.393 Sum_probs=206.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCC---ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+|++.+.||+|+||.||+|.++.++ ..+|+|.+.... .....+.+.+|+.+++++. ||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcc
Confidence 56899999999999999999986544 379999886432 2334577899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCcccccc
Confidence 9999999999999998764 4689999999999999999999999999999999999994 56779999999998754
Q ss_pred CCCcc----ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ....++..|+|||.+.+ .++.++|+||||+++|++++ |..||......+....+.... ..+ ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~ 234 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RLP--APMDC 234 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cCC--CCCCC
Confidence 32211 11223567999998864 58999999999999999886 999998877776666665542 222 22467
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+.+++.+||+.+|.+||++.++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=313.00 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=201.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCce----EEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..|++.+.||+|+||+||+|.+..++.. +++|.+... ........+..|+.++.++. ||||+++++++. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~-~~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLD-HAYIVRLLGICP-GAS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCC-CCCcceEEEEEC-CCc
Confidence 4688999999999999999999877764 667766422 12233466788888899988 999999999875 456
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++++||+++|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||+++..
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 78999999999999999764 568999999999999999999999999999999999999 45678999999999875
Q ss_pred CCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... .....++..|+|||++. +.++.++||||||+++||+++ |..||.+.......+.+..+..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 236 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ---PQIC 236 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC---CCCC
Confidence 43321 22345677899999885 458999999999999999998 9999988877666555554432221 1245
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.++.+++.+||..||++|||+.++++
T Consensus 237 ~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 237 TIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 788999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=325.37 Aligned_cols=251 Identities=25% Similarity=0.396 Sum_probs=198.9
Q ss_pred ccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~- 139 (480)
.++|++.+.||+|+||+||+|.+. .+++.||||++.... .......+.+|+.++.++.+||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 467999999999999999999853 457889999986432 223456788999999999769999999998754
Q ss_pred CCeEEEEEecCCCCchHHHHHhc---------------------------------------------------------
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK--------------------------------------------------------- 162 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 162 (480)
+..+++|||||++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 45688999999999999988642
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc---ccc
Q 011647 163 ----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKD 229 (480)
Q Consensus 163 ----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~ 229 (480)
..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++........ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCC
Confidence 1367788889999999999999999999999999999994 567899999999876532221 112
Q ss_pred CCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 230 LVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 230 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
..+++.|+|||++. ..++.++||||||+++|+|++ |..||...... .....+..+. ....+ ...++++.+++.+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 317 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAP--DYTTPEMYQTMLD 317 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC-CCCCC--CCCCHHHHHHHHH
Confidence 34567799999875 458899999999999999997 99999765433 2333333322 11111 2467899999999
Q ss_pred hcccCcCCCCCHHHHhcC
Q 011647 307 MLHADPKERLSAAEVLNH 324 (480)
Q Consensus 307 ~L~~dp~~R~t~~~~l~h 324 (480)
||+.||++|||+.++++|
T Consensus 318 cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 318 CWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HccCChhhCcCHHHHHHH
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=321.58 Aligned_cols=253 Identities=25% Similarity=0.406 Sum_probs=207.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCC-------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDT-------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA 136 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~ 136 (480)
....+|.+++.||+|+||.||+|.+... +..||+|.+... ......+.+.+|+.+++++.+||||++++++
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 3446799999999999999999986432 236899987642 2233457789999999999559999999999
Q ss_pred EEeCCeEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCccee
Q 011647 137 YEDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200 (480)
Q Consensus 137 ~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil 200 (480)
+...+.+++||||+++++|.+++.... .++...+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 166 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL 166 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence 999999999999999999999987532 3778889999999999999999999999999999999
Q ss_pred cccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 011647 201 FSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQ 275 (480)
Q Consensus 201 ~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~ 275 (480)
+ +.++.+||+|||+++....... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+....
T Consensus 167 l---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 167 V---TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred E---cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 9 4567799999999986543221 112234567999998854 58899999999999999998 89999888877
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+....+...... ......+.++.+++.+||+.+|++|||+.+++++
T Consensus 244 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 244 ELFKLLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 777766554321 1223578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=315.17 Aligned_cols=247 Identities=23% Similarity=0.375 Sum_probs=203.2
Q ss_pred ceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++.+. ||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCC
Confidence 47888999999999999998753 23568988876432 2334577889999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcc
Q 011647 143 VNLIMDLCAGGELFDRIIAK------------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N 198 (480)
.++||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 99999999999999987642 247889999999999999999999999999999999
Q ss_pred eecccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 011647 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGET 273 (480)
Q Consensus 199 il~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~ 273 (480)
||+. +++.+||+|||++........ .....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+..
T Consensus 158 ill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9994 567799999999876533221 122345678999998754 48899999999999999998 999998888
Q ss_pred hHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.......+.... .. .....++.++.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~-~~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTGY-RM--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCCC-CC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 777766655432 11 122467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=311.56 Aligned_cols=248 Identities=22% Similarity=0.398 Sum_probs=206.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
..|++.+.||+|+||.||+|.++.+++ .||||.+... ........+.+|+.+++++. ||||+++++++..+...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCce
Confidence 458899999999999999999887665 5999998643 23445678999999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++|++|+||||+||++ +.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCccccccc
Confidence 9999999999999988764 568999999999999999999999999999999999999 456779999999987654
Q ss_pred CCCcc---ccCC---CCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 223 PGDVF---KDLV---GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 223 ~~~~~---~~~~---gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
..... .... ++..|+|||++.+ .++.++|||||||++||+++ |..||...........+... .. .+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~--~~~~~ 234 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YR--LPPPM 234 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-Cc--CCCcc
Confidence 32211 1111 2357999998864 58899999999999999886 99999888877776666433 22 22234
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.++..+.+++.+||..+|.+||++.+++.
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 67899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=316.53 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=202.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCC--------------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCee
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT--------------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv 131 (480)
..+|++.+.||+|+||.||+|.+..+ ...||+|.+.... .....+.+.+|++++++++ ||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~ 80 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLK-NPNII 80 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCcC
Confidence 35799999999999999999987543 2358999986432 3344567899999999998 99999
Q ss_pred EEEEEEEeCCeEEEEEecCCCCchHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcce
Q 011647 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (480)
Q Consensus 132 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Ni 199 (480)
++++++...+..++||||+.+++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999886432 368889999999999999999999999999999999
Q ss_pred ecccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh--CCCCCCCCC
Q 011647 200 LFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS--GVPPFWGET 273 (480)
Q Consensus 200 l~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt--g~~pf~~~~ 273 (480)
+++ .++.+||+|||++........ .....++..|+|||++. +.++.++||||||+++|+|++ |..||....
T Consensus 161 ll~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 161 LVG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EEc---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 994 466799999999876543321 12234567899999875 458999999999999999988 678888776
Q ss_pred hHHHHHHHHcC----CCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 274 EQSIFDAILRG----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 274 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.......+... .........+..++.+.+|+.+||..||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 238 DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 66555443221 111111122457899999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=327.66 Aligned_cols=253 Identities=24% Similarity=0.361 Sum_probs=203.8
Q ss_pred cccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+++.||+|+||.||+|.+. .+++.||+|++.... .....+.+.+|+.++.++..||||+++++++..
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 3457889999999999999999964 345689999996432 223345788999999999779999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC--------------------------------------------------------
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG-------------------------------------------------------- 163 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------------------------- 163 (480)
.+..++|||||.+|+|.+++...+
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 999999999999999999886432
Q ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 164 ------------------------------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 164 ------------------------------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
.+++..+..++.||+.||.|||+.||+||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl 272 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence 25667788999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+ +++.+||+|||+++....... .....+++.|+|||++.+ .++.++||||||+++|||++ |..||......+
T Consensus 273 ~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 273 C---EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred e---CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 4 467799999999986532221 123457788999998864 48899999999999999998 899997755544
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
............. ....++.++.+++.+||..+|++||++.++++.
T Consensus 350 ~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 350 QFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4333333222221 224578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=292.13 Aligned_cols=255 Identities=29% Similarity=0.558 Sum_probs=212.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--e
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--S 142 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--~ 142 (480)
..++|.+.+++|+|.|+.||.|....+...++||++++.+ .+.+.||++||..|++||||++++++..+.. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 3478999999999999999999999899999999996543 3789999999999999999999999987654 5
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
..+|+||+.+.+...+. ..++...++.++.+++.||.|||+.||+|||+||.|++|+ .+...++|+|+|+|.++.
T Consensus 110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcC
Confidence 77999999886654433 4588899999999999999999999999999999999997 345679999999999999
Q ss_pred CCCccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHc-------------CCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFW-GETEQSIFDAILR-------------GHI 286 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~-~~~~~~~~~~~~~-------------~~~ 286 (480)
++...+-.+.+..|--||.+. ..|+.+-|+|||||+|..|+..+.||. |.+..+.+.+|.. -.+
T Consensus 185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 998888888999999999886 458999999999999999999888874 4444443333311 001
Q ss_pred c-----------CCCCCCC---------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 287 D-----------FSSDPWP---------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 287 ~-----------~~~~~~~---------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
. ....+|. -+++++.+|+.++|..|..+|+|+.|++.||||..-
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 1 1111221 246999999999999999999999999999999743
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=319.39 Aligned_cols=263 Identities=27% Similarity=0.457 Sum_probs=219.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChh----cHHHHHHHHHHHHHccCCCCeeEEEEEEE-e
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD----DVEDVRREVQIMHHLTGHRNIVELKGAYE-D 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~~hp~iv~~~~~~~-~ 139 (480)
+.++|.++..||+|||+.||+|.+....+.||||+-...+.+..+ ..+...+|..|.+.|. ||.||++|++|. +
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDyfslD 539 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDYFSLD 539 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeeeeeec
Confidence 557899999999999999999999999999999987654433222 2345678999999998 999999999986 5
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+.+|-|+|||+|.+|.-+|+.++.+++.+++.|+.||+.||.||.+.. |||-||||.|||+.+....|.|||.|||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 5678899999999999889999999999999999999999999999875 99999999999999888889999999999
Q ss_pred ceecCCCCc--------cccCCCCcccccccccc-c----cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHH--H
Q 011647 218 SVFFKPGDV--------FKDLVGSAYYVAPEVLR-R----NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDA--I 281 (480)
Q Consensus 218 a~~~~~~~~--------~~~~~gt~~y~aPE~~~-~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~--~ 281 (480)
++.+..... .....||.+|++||.+. + ..+.++||||+|||+|.++.|+.||..+-.+ +++.. |
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 998754321 23468999999999763 2 3788999999999999999999999765432 33222 2
Q ss_pred H-cCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 282 L-RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 282 ~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+ .....||. -|.+++++++||++||+...++|..+.++..||||.-.
T Consensus 700 lkAtEVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 700 LKATEVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred hcceeccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 2 22334444 36899999999999999999999999999999999753
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=312.38 Aligned_cols=252 Identities=30% Similarity=0.526 Sum_probs=208.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
+|.+.+.||+|+||+||++.+..++..+++|++...... .......+.+|+.+++++. ||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 588999999999999999999887777777776543221 2223345778999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 146 IMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
||||+++++|.+++.. ...+++..++.++.|++.||.|||++|++|+||||+||+++ ++.++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 9999999999887753 35699999999999999999999999999999999999994 345999999998875
Q ss_pred CCCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 222 KPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 222 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.... ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+..+.... ....++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 232 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS---LPETYSRQ 232 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC---CcchhcHH
Confidence 4332 2334568899999998754 47889999999999999999999998776666555554432221 12367889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
+.++|.+||..+|++||++.++++||||
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=308.20 Aligned_cols=240 Identities=24% Similarity=0.359 Sum_probs=197.2
Q ss_pred eecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 74 ELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
.||+|+||.||+|.+. ..+..||+|++.... .....+.+.+|+.+++++. ||||+++++++. ....++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 4899999999999875 445679999886432 2334567899999999998 999999999885 457899999999
Q ss_pred CCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc---
Q 011647 152 GGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (480)
Q Consensus 152 ~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~--- 227 (480)
+++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||+++ .++.+||+|||++.........
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCccceec
Confidence 9999998875 45799999999999999999999999999999999999994 5677999999998765433211
Q ss_pred -ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 228 -KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 228 -~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
....+++.|+|||++.. .++.++||||||+++|++++ |..||......+....+..+.... ..+..++++.++|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 231 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD---CPAECPPEMYALM 231 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHH
Confidence 11223568999998764 58889999999999999996 999998888777776666544321 1245789999999
Q ss_pred HHhcccCcCCCCCHHHHhc
Q 011647 305 KKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~ 323 (480)
.+||..+|++||++.++++
T Consensus 232 ~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 232 KDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHcCCChhhCcCHHHHHH
Confidence 9999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=314.15 Aligned_cols=249 Identities=24% Similarity=0.381 Sum_probs=206.7
Q ss_pred ccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++++. ||||+++++++..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-HPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcC-CCchheEEEEEcCC
Confidence 4679999999999999999998753 57889999886432 2334567889999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcc
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK----------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N 198 (480)
...++||||+++++|.+++... ..+++..++.++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 9999999999999999988643 237888899999999999999999999999999999
Q ss_pred eecccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 011647 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGET 273 (480)
Q Consensus 199 il~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~ 273 (480)
|++ +.++.++|+|||++........ .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+..
T Consensus 161 il~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 161 CLV---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred eEe---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999 4567799999999876533221 11223466799999875 458999999999999999997 888998887
Q ss_pred hHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..+....+..+.... ....++.++.+++.+||+.+|.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 238 HEEVIYYVRDGNVLS---CPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 777777766554321 12357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=320.41 Aligned_cols=254 Identities=24% Similarity=0.358 Sum_probs=199.2
Q ss_pred ecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 71 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+++.+| ++|.||+++...+++.||||++.... ......+.+.+|+.+++.++ ||||+++++++.+.+..+++|||+
T Consensus 6 i~~~~~--~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~ 81 (314)
T cd08216 6 IGKCFE--DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLM 81 (314)
T ss_pred hhHhhc--CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEecc
Confidence 344444 44566666777789999999987542 23445678999999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC---
Q 011647 151 AGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--- 225 (480)
Q Consensus 151 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~--- 225 (480)
++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeeccccccc
Confidence 999999988753 4589999999999999999999999999999999999994 46779999999887543221
Q ss_pred -----ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC---------
Q 011647 226 -----VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF--------- 288 (480)
Q Consensus 226 -----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~--------- 288 (480)
......++..|+|||++.. .++.++||||+||++|+|++|..||..............+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 1123457788999999854 47889999999999999999999998765443322211111000
Q ss_pred ---------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 289 ---------------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 289 ---------------------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.......++.++.+|+.+||..||++|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0000112356788999999999999999999999999998554
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=306.86 Aligned_cols=242 Identities=23% Similarity=0.392 Sum_probs=205.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|.+.+.||.|+||.||+|... ++.||+|.+..... ..+.+.+|+.+++++. |+||+++++++.+....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEE
Confidence 56889999999999999999875 68899999864321 4578899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||++ +.++.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccccc
Confidence 99999999999987665 69999999999999999999999999999999999999 45677999999999876322
Q ss_pred CccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. ....++..|+|||++. +.++.++||||||+++|++++ |..||...........+..... ......+++.+.+
T Consensus 156 ~--~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 230 (256)
T cd05039 156 Q--DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR---MEAPEGCPPEVYK 230 (256)
T ss_pred c--ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---CCCccCCCHHHHH
Confidence 2 2334566799999875 458889999999999999997 9999988877766665554322 1122457899999
Q ss_pred HHHHhcccCcCCCCCHHHHhc
Q 011647 303 IVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~ 323 (480)
+|.+||..+|++|||+.++++
T Consensus 231 li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 231 VMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=307.36 Aligned_cols=245 Identities=23% Similarity=0.381 Sum_probs=202.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+...||+|+||.||+|.+..+ ..+|+|.+.... ...+.+.+|+.+++++. |||++++++++. .+..++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLR-HDKLVPLYAVVS-EEPIYI 77 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCC-CCCeeeEEEEEc-CCCcEE
Confidence 35799999999999999999998765 469999876432 22367889999999998 999999999875 456889
Q ss_pred EEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||+.+++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||++ ++++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccC
Confidence 99999999999998764 348899999999999999999999999999999999999 4567799999999986543
Q ss_pred CCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
... .....++..|+|||.+. +.++.++||||||+++|+|++ |..||.+....+....+..... . .....++..
T Consensus 155 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 231 (260)
T cd05069 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-M--PCPQGCPES 231 (260)
T ss_pred CcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCCcccCHH
Confidence 321 12234567899999876 458889999999999999999 9999988887777766655422 1 222467899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.+++.+||.+||++||+++++++
T Consensus 232 ~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 232 LHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.97 Aligned_cols=246 Identities=27% Similarity=0.471 Sum_probs=208.6
Q ss_pred eeecceecccCCeEEEEEEEcCCC----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.+.+.||.|+||.||++.+...+ ..||+|.+.... .....+.+..|+.++..+. ||||+++++++.+.+..+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeE
Confidence 356789999999999999998766 889999986432 2225678999999999996 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++|||+++++|.+++..... +++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++....
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCceecc
Confidence 99999999999999876554 99999999999999999999999999999999999994 56679999999998765
Q ss_pred CCCccc--cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDVFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
...... ...+++.|+|||.+. ..++.++||||||+++|+|++ |.+||...........+........ ...++.
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 231 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPP 231 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCH
Confidence 432222 133678999999885 458899999999999999998 8899988777777777766543222 234789
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+++.+||..||++|||+.++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 232 EIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHHCcCChhhCcCHHHHHh
Confidence 9999999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=307.49 Aligned_cols=245 Identities=22% Similarity=0.393 Sum_probs=202.8
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+..... ..+.+.+|+.++++++ |||++++++++. ....++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCcEE
Confidence 457999999999999999999876 456799999865332 2356899999999998 999999999875 456889
Q ss_pred EEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++ +++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIED 154 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccC
Confidence 99999999999988753 4589999999999999999999999999999999999994 567799999999987543
Q ss_pred CCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
... .....++..|+|||++. ..++.++||||||+++|+|++ |..||.+....+....+..... . +.....+..
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 231 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR-M--PCPQDCPIS 231 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C--CCCCcCCHH
Confidence 321 11234566799999875 458889999999999999999 8999988777777776655321 1 122467899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.+++.+||.++|++|||++++++
T Consensus 232 ~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 232 LHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHH
Confidence 999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=308.16 Aligned_cols=248 Identities=22% Similarity=0.396 Sum_probs=206.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
++|...+.||+|+||.||+|.++.++. .+|+|.+.... .....+.+.+|+.+++++. ||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCc
Confidence 468889999999999999999876654 79999885432 2334567889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+++++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccceecc
Confidence 9999999999999988764 5789999999999999999999999999999999999994 56779999999988654
Q ss_pred CCCcc--c--cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDVF--K--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~~--~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... . ....+..|+|||++. +.++.++|||||||++|+|++ |..||...........+..... . +....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~-~--~~~~~~ 235 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFR-L--PAPMDC 235 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCC-C--CCCCCC
Confidence 32211 1 112345799999876 457899999999999999997 9999988887777777665421 1 122357
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.++.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=310.94 Aligned_cols=250 Identities=22% Similarity=0.432 Sum_probs=209.2
Q ss_pred cceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+|.+.+.||+|+||+||+|+.+. ..+.|++|.+.... .....+.+.+|+.+++++. ||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCC
Confidence 568999999999999999999754 34679999875432 2224577899999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG---------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
..++||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEE
Confidence 9999999999999999998765 689999999999999999999999999999999999994 5667999
Q ss_pred eecccceecCCCC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcC
Q 011647 213 TDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 213 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
+|||++....... ......++..|+|||.+. +.++.++||||||+++|++++ |..||...........+..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9999987543221 223345678899999875 457889999999999999998 888998877777777666555443
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+. ...++..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 PV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 32 24678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=306.49 Aligned_cols=241 Identities=24% Similarity=0.402 Sum_probs=201.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE-EeCCeEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY-EDRHSVNL 145 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~-~~~~~~~l 145 (480)
.+|.+.+.||+|+||.||++... +..||+|.+... ...+.+.+|+.+++++. |+|++++++++ ..++..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEE
Confidence 46899999999999999999775 678999987532 23467889999999998 99999999875 45667999
Q ss_pred EEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceeccc
Confidence 999999999999987654 38899999999999999999999999999999999999 4567899999999886433
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.. ....++..|+|||++.+ .++.++|||||||++|+|++ |+.||...........+..+.. ....+.+++.+.
T Consensus 155 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (256)
T cd05082 155 TQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVVY 229 (256)
T ss_pred cC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHHH
Confidence 22 23345668999998865 48889999999999999997 9999988777766666655422 222356789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhc
Q 011647 302 DIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+++.+||+.+|++|||+.++++
T Consensus 230 ~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 230 DVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=307.00 Aligned_cols=246 Identities=22% Similarity=0.361 Sum_probs=204.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..+.|++.++||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.+++++. ||||+++++++. .+..+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCcE
Confidence 4567999999999999999999875 467899999864332 3467889999999998 999999999874 56789
Q ss_pred EEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+.+++|.+++... ..+++..+..++.|++.||+|||+.|++||||||+||++ +.++.++|+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecC
Confidence 999999999999988653 358999999999999999999999999999999999999 456779999999998765
Q ss_pred CCCc--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... .....++..|+|||++.+ .++.++||||||+++|++++ |+.||.+.+..+....+..... . +.....+.
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 230 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR-M--PRPDNCPE 230 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC-C--CCCCCCCH
Confidence 2221 122345678999998864 57889999999999999999 9999988877777666654322 1 22245788
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+++.+||..+|++|||++++++
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 231 ELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=305.36 Aligned_cols=247 Identities=24% Similarity=0.401 Sum_probs=207.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+.. ++.||||.+.... ...+.+.+|+.+++++. ||||+++++++......+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT----MSPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCc----cCHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceE
Confidence 45789999999999999999999764 5789999986433 23467889999999998 999999999999989999
Q ss_pred EEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIE 154 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceecc
Confidence 999999999999998764 3689999999999999999999999999999999999994 56789999999988764
Q ss_pred CCCc--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... .....++..|+|||.+.+ .++.++||||||+++|++++ |+.||.+.........+...... ......+.
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM---PRPPNCPE 231 (261)
T ss_pred chhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCH
Confidence 3211 112234568999998864 58889999999999999998 99999888877777776654221 11235689
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+++.+||..+|++||++.++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 232 ELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=306.15 Aligned_cols=242 Identities=26% Similarity=0.424 Sum_probs=202.1
Q ss_pred ceecccCCeEEEEEEEcC-CC--ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEec
Q 011647 73 RELGRGQFGVTYLVTHKD-TK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 149 (480)
+.||+|++|+||+|.+.. .+ ..||||.+...... ...+.+.+|+.+++++. ||||+++++.+.. ..+++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999999865 33 36999998764432 45678999999999998 9999999999988 889999999
Q ss_pred CCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc-
Q 011647 150 CAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV- 226 (480)
Q Consensus 150 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~- 226 (480)
+++++|.+.+.... .+++..++.++.|++.||.|||++|++|+||||+||+++ .++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc
Confidence 99999999987754 689999999999999999999999999999999999994 457899999999987643221
Q ss_pred ---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 227 ---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 227 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.....++..|+|||++.+ .++.++|||||||++|+|++ |..||...+..+....+......... ...+|..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLER--PEACPQDIY 231 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCC--CccCCHHHH
Confidence 112456788999998864 58899999999999999998 99999887777766666543222221 235789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhc
Q 011647 302 DIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+++.+||..+|++|||+.++++
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=310.70 Aligned_cols=248 Identities=25% Similarity=0.363 Sum_probs=194.8
Q ss_pred cce-eecceecccCCeEEEEEEE----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--
Q 011647 67 NTY-IFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-- 139 (480)
Q Consensus 67 ~~y-~~~~~lG~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-- 139 (480)
++| .+.+.||+|+||+||++.. ..++..||+|.+.... .......+.+|+.++++++ ||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC
Confidence 455 8999999999999988653 4567899999986432 2234567889999999998 9999999998765
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
...+++||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~ 155 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAK 155 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeeccccc
Confidence 3468999999999999998865 4699999999999999999999999999999999999994 56779999999998
Q ss_pred ecCCCCc----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH--HHH------------HH
Q 011647 220 FFKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ--SIF------------DA 280 (480)
Q Consensus 220 ~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~------------~~ 280 (480)
....... .....++..|+|||++. ..++.++||||||+++|+|++|..||...... +.. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhh
Confidence 7543321 12234567799999886 45889999999999999999999998653321 000 00
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
........ +....++.++.+++.+||+.+|++|||+.++++
T Consensus 236 ~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 236 LLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00001111 112357899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=312.36 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=200.5
Q ss_pred ccceeecceecccCCeEEEEEEEcC----------------CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD----------------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (480)
.++|++.+.||+|+||+||++.+.. ++..||+|.+.... .......+.+|+.+++++. |||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~-~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLK-DPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCC
Confidence 4579999999999999999986542 34569999886432 2334567899999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcc
Q 011647 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (480)
Q Consensus 130 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N 198 (480)
|+++++++...+..++||||+.+++|.+++.... .+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 9999999999999999999999999999887542 36778899999999999999999999999999999
Q ss_pred eecccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh--CCCCCCCC
Q 011647 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS--GVPPFWGE 272 (480)
Q Consensus 199 il~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt--g~~pf~~~ 272 (480)
|+++ .++.++|+|||++........ .....+++.|+|||+.. +.++.++|||||||++|+|++ |..||...
T Consensus 161 ili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 161 CLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9994 567799999999886543221 11233467899999764 568999999999999999998 77899776
Q ss_pred ChHHHHHHHHc----CCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 273 TEQSIFDAILR----GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 273 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...+....... .......+....+++.+.+|+.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 66554443211 1011111122357799999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=303.76 Aligned_cols=246 Identities=26% Similarity=0.489 Sum_probs=205.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|++.+.||+|+||.||+|.+.. +..+|+|.+..... ....+.+|+++++++. ||||+++++++......++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCC----CHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEE
Confidence 368889999999999999998864 67899998864322 2356889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+.+++|.+++... +.++++.+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCc
Confidence 9999999999988764 5689999999999999999999999999999999999994 56679999999987653322
Q ss_pred c--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 V--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
. .....++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+...+.. ...+..+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RLASQSVY 231 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CCCCHHHH
Confidence 1 11223556899999886 458889999999999999998 99999888777777776554332221 24689999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+++.+||+.+|++|||+.+++++
T Consensus 232 ~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 232 ELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHcccChhhCCCHHHHHHh
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=307.67 Aligned_cols=247 Identities=24% Similarity=0.345 Sum_probs=205.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.+|++.+.||+|+||+||+|.++.++. .||+|.+.... .......+.+|+.+++++. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVD-HPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEec-Cc
Confidence 578999999999999999999876654 58999876443 2344567889999999997 9999999999877 78
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++||||+++++|.+++... ..+++..+..++.||+.||+|||++|++||||||+||+++ .++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCcccccc
Confidence 89999999999999998764 4699999999999999999999999999999999999994 5667999999999876
Q ss_pred CCCCccc---cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGDVFK---DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
....... ...++..|+|||.+. +.++.++|+||||+++|++++ |..||.+....+....+..+.. .+. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~ 236 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-LPQ--PPIC 236 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-CCC--CCCC
Confidence 5332211 122356799999875 458899999999999999998 9999998887777766665432 121 2346
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+..+.+++.+||..+|.+||++.++++
T Consensus 237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 237 TIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=301.00 Aligned_cols=241 Identities=26% Similarity=0.399 Sum_probs=199.1
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++++. ||||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCC
Confidence 36899999999999865 57899999876432 2333456889999999997 99999999999999999999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc--cc
Q 011647 153 GELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--KD 229 (480)
Q Consensus 153 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~--~~ 229 (480)
++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++......... ..
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccccCCC
Confidence 9999988653 458999999999999999999999999999999999999 45677999999998764332211 11
Q ss_pred CCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHh
Q 011647 230 LVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307 (480)
Q Consensus 230 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 307 (480)
..++..|+|||++.+ .++.++||||||+++|++++ |..||...........+..... ......++..+.+++.+|
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~ 230 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR---MSCPQKCPDDVYKVMQRC 230 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHH
Confidence 234567999998864 58889999999999999998 9999988777666665554321 122246789999999999
Q ss_pred cccCcCCCCCHHHHhc
Q 011647 308 LHADPKERLSAAEVLN 323 (480)
Q Consensus 308 L~~dp~~R~t~~~~l~ 323 (480)
|..+|++||++.++++
T Consensus 231 l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 231 WDYKPENRPKFSELQK 246 (250)
T ss_pred cccCcccCCCHHHHHH
Confidence 9999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=303.95 Aligned_cols=228 Identities=25% Similarity=0.357 Sum_probs=187.6
Q ss_pred cCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCchHH
Q 011647 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD 157 (480)
Q Consensus 78 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 157 (480)
|.+|.||+++++.+++.||+|.+.... ...+|...+.... ||||+++++++......++||||++|++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 889999999999999999999986542 1233444444445 9999999999999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCcccc
Q 011647 158 RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237 (480)
Q Consensus 158 ~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~ 237 (480)
++.+...+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|+|||.+...... .....++..|+
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhccccc--cccCCcCcccc
Confidence 998888899999999999999999999999999999999999994 5667999999987655332 23345677899
Q ss_pred ccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCC
Q 011647 238 APEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL 316 (480)
Q Consensus 238 aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 316 (480)
|||++.+ .++.++|+||+|+++|+|++|..|+....... ....... ..+.+++.++++|.+||+.||++||
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------NTHTTLN--IPEWVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------ccccccC--CcccCCHHHHHHHHHHccCCHHHhc
Confidence 9998864 58889999999999999999998875432210 0011111 1135789999999999999999999
Q ss_pred CH-----HHHhcCCcc
Q 011647 317 SA-----AEVLNHPWM 327 (480)
Q Consensus 317 t~-----~~~l~h~~~ 327 (480)
++ +++++||||
T Consensus 222 ~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 222 GAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCCccchHHHHcCCCC
Confidence 86 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=337.24 Aligned_cols=343 Identities=20% Similarity=0.287 Sum_probs=216.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCC----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEE----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDT----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA---- 136 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~---- 136 (480)
..++|.+.+.||+|+||+||+|.+..+ +..||||.+..... .+....+ . +.... +.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~-l~~~~-~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-R-VRRAC-PNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-H-HHhhc-hhhHHHHHHhhhcc
Confidence 346899999999999999999999988 89999998753221 1111111 1 11111 2222222111
Q ss_pred --EEeCCeEEEEEecCCCCchHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCC
Q 011647 137 --YEDRHSVNLIMDLCAGGELFDRIIAKGH--------------------YSERAAANLCRQMVTVVHYCHSMGVMHRDL 194 (480)
Q Consensus 137 --~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl 194 (480)
...+..+++||||+.+++|.+++..... .....+..++.||+.||.|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2456779999999999999988865321 123456789999999999999999999999
Q ss_pred CCcceecccCCCCCCeeEeecccceecCCCC--ccccCCCCccccccccccc-----------------------cCCCc
Q 011647 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRR-----------------------NYGAE 249 (480)
Q Consensus 195 kp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------------------~~~~~ 249 (480)
||+|||++. .++.+||+|||+++....+. ......|++.|+|||.+.. .++.+
T Consensus 282 KP~NILl~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 282 KPQNIIFSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred CHHHEEEeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 999999952 35679999999998654322 2345689999999996521 12345
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHcCCCcC-------CCC----------CCCCCCHHHHHHHHHhcccC
Q 011647 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDA-ILRGHIDF-------SSD----------PWPNISSSAKDIVKKMLHAD 311 (480)
Q Consensus 250 ~DiwslG~il~~lltg~~pf~~~~~~~~~~~-~~~~~~~~-------~~~----------~~~~~~~~~~~li~~~L~~d 311 (480)
+|||||||+||||+++..|+.. ....+.. +....... ... .+........+||.+||+.|
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 6999999999999997666432 2111111 11111100 000 00112334568999999999
Q ss_pred cCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCccc
Q 011647 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391 (480)
Q Consensus 312 p~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~ 391 (480)
|++|||+.++|+||||+..............++ ..... .+.-.+-...+......-..+.+|-.+
T Consensus 438 P~kR~ta~e~L~Hpff~~~~~~~~~~~~~~~~~---~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREGLLGLSVMQNLRLQ---LFRAT------------QQDYGEAAAWVVFLMAKSGTEKEGGFT 502 (566)
T ss_pred cccCCCHHHHhCCcCcCCCCccccccccccccc---cchhh------------HHHHHHHHHHHHHHHHhcCCCCCCCcc
Confidence 999999999999999986543321111000000 00000 000001111122233334566778889
Q ss_pred HHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHH
Q 011647 392 FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434 (480)
Q Consensus 392 ~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~ 434 (480)
..++..+...-..+.....-..+....+.+..|..++.+++.-
T Consensus 503 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (566)
T PLN03225 503 EAQLQELREKEPKKKGSAQRNALASALRLQRKGVKTVARTVDE 545 (566)
T ss_pred HHHHHHhhhhcCcchhhhhhhhHHHHHhhhhhhhhhhhhhhhc
Confidence 8888886555422222222223777888888999999988864
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=309.10 Aligned_cols=240 Identities=18% Similarity=0.298 Sum_probs=192.6
Q ss_pred ceecccCCeEEEEEEEcCCCc-------eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 73 RELGRGQFGVTYLVTHKDTKQ-------QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
+.||+|+||+||+|.+...+. .||+|.+... .....+.+.+|+.+++.+. ||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEE
Confidence 469999999999999865543 4888877432 2233467888999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC-----CCCeeEeecccce
Q 011647 146 IMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-----DSPLKATDFGLSV 219 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-----~~~ikl~Dfg~a~ 219 (480)
||||+.+|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.++. ...++++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999987654 5899999999999999999999999999999999999965322 1247999999987
Q ss_pred ecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGV-PPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ....+++.|+|||++.+ .++.++||||||+++|+|++|. .||.......... .......++ ...
T Consensus 157 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~----~~~ 228 (258)
T cd05078 157 TVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQLP----APK 228 (258)
T ss_pred ccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccCC----CCC
Confidence 65432 33568889999999864 4788999999999999999984 6665555444332 223222222 235
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.++.+++.+||+.||++|||++++++.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 6889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=310.74 Aligned_cols=249 Identities=25% Similarity=0.409 Sum_probs=198.5
Q ss_pred cceeecceecccCCeEEEEEEE----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--
Q 011647 67 NTYIFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-- 140 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~-- 140 (480)
..|++.+.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++++. ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCC
Confidence 3578999999999999999984 4568899999986432 2344577999999999998 99999999998765
Q ss_pred CeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
...++||||++|++|.+++.+. ..+++..+..++.||+.||.|||++|++||||||+||+++ .++.++|+|||++.
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~ 157 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTK 157 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCcccc
Confidence 5689999999999999988664 3589999999999999999999999999999999999994 46779999999998
Q ss_pred ecCCCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---------------HHHHH
Q 011647 220 FFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSIFD 279 (480)
Q Consensus 220 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---------------~~~~~ 279 (480)
....... .....|+..|+|||++.+ .++.++||||||+++|+|+++..|+..... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 7643321 123456778999998754 588999999999999999998776532111 11111
Q ss_pred HHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+..+ .. .+....++..+.+|+.+||+.+|++|||+.+++++
T Consensus 238 ~~~~~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 238 VLEEG-KR--LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHcC-cc--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 11111 11 12234688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=305.72 Aligned_cols=248 Identities=27% Similarity=0.393 Sum_probs=204.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+|.+.+.||+|+||.||+|.+... ...||||.+.... .....+.+.+|+.+++++. ||||+++++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFD-HPHIVKLIGVITE-NP 80 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-CC
Confidence 35688999999999999999987644 4569999875432 2344578899999999998 9999999998875 55
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++ ..+.++|+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYL 157 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeec
Confidence 789999999999999997644 589999999999999999999999999999999999994 4667999999999876
Q ss_pred CCCCccc--cCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 222 KPGDVFK--DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 222 ~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
....... ...++..|+|||.+.. .++.++||||||+++|++++ |..||......+....+..+... ...+.++
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~ 234 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPNCP 234 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCC
Confidence 4432211 2234567999998764 58899999999999999886 99999888777766666554322 2235688
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..+.+++.+||..+|++|||+.+++.
T Consensus 235 ~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 235 PTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=307.18 Aligned_cols=249 Identities=21% Similarity=0.293 Sum_probs=205.5
Q ss_pred ccceeecceecccCCeEEEEEEEcC----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-C
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-R 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-~ 140 (480)
.++|.+.+.||+|+||.||+|.+.. ++..|++|.+... ......+.+.+|+.+++++. ||||+++++++.. .
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCC
Confidence 4679999999999999999999876 3578999987532 24445677899999999997 9999999998765 5
Q ss_pred CeEEEEEecCCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK--------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
...++++||+.+++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEE
Confidence 6789999999999999988653 4589999999999999999999999999999999999994 5678999
Q ss_pred eecccceecCCCCcc---ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCc
Q 011647 213 TDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHID 287 (480)
Q Consensus 213 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~ 287 (480)
+|||+++.+...... ....++..|+|||++.+ .++.++||||||+++|++++ |..||......+....+..+. .
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~ 237 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-R 237 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-C
Confidence 999999865433211 22345678999998864 48899999999999999998 999998877766655554432 2
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+. ....+++++.+++.+||..||++|||+.++++
T Consensus 238 ~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 LA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 22 22457899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=301.22 Aligned_cols=241 Identities=27% Similarity=0.400 Sum_probs=200.2
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
+.||.|+||.||+|.+.. ++.||+|.+..... ......+.+|+.+++++. ||||+++++++......++||||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 479999999999999987 89999998865332 234577899999999998 99999999999999999999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc---c
Q 011647 153 GELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF---K 228 (480)
Q Consensus 153 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~---~ 228 (480)
++|.+++... ..+++..+..++.+++.||.|||++|++||||||+||++ +.++.++|+|||++......... .
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCcceeccc
Confidence 9999988653 468999999999999999999999999999999999999 45677999999998765422111 1
Q ss_pred cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 229 DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 229 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
...++..|+|||++. +.++.++|+||||+++|+|++ |..||...........+.... .. .....++.++.+++.+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~ 230 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM--PAPQLCPEEIYRLMLQ 230 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--CCCccCCHHHHHHHHH
Confidence 123356799999876 458899999999999999999 889998877666555554432 11 1224678999999999
Q ss_pred hcccCcCCCCCHHHHhc
Q 011647 307 MLHADPKERLSAAEVLN 323 (480)
Q Consensus 307 ~L~~dp~~R~t~~~~l~ 323 (480)
||..+|.+|||+.++++
T Consensus 231 ~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 231 CWAYDPENRPSFSEIYN 247 (251)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=304.64 Aligned_cols=252 Identities=29% Similarity=0.503 Sum_probs=208.3
Q ss_pred ceeecceecccCCeEEEEEEEcC-CCceEEEEEeccccc-------CChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKL-------INRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
.|.+.+.||+|+||.||+|.+.. .++.+|+|.+..... ........+.+|+.++.+..+||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37889999999999999999987 678999998864321 1223345677889888765459999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEee
Q 011647 140 RHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
++..++||||++|++|.+++.. ...+++..++.++.|++.||.|||+ .|++|+||+|+||+++ .++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEec
Confidence 9999999999999999887743 3469999999999999999999996 7899999999999994 567799999
Q ss_pred cccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
||.+.............|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...........+........ ..
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~ 235 (269)
T cd08528 158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL--PE 235 (269)
T ss_pred ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC--Cc
Confidence 999987655444455678999999998864 488999999999999999999999987776666665555433211 12
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..+++++.++|.+||+.||++||++.++..+
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 3578999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=304.87 Aligned_cols=244 Identities=21% Similarity=0.347 Sum_probs=192.7
Q ss_pred ceecccCCeEEEEEEEcC--CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+.||+|+||+||+|.... ....+|+|.+.... .......+.+|+.+++.+. ||||+++++.+.....+++||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeC
Confidence 469999999999997533 34578888775332 2333466788999999997 999999999999999999999999
Q ss_pred CCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 151 AGGELFDRIIAKG-----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 151 ~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
++++|.+++.... ..++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccch
Confidence 9999999987643 24678889999999999999999999999999999999 456779999999987543221
Q ss_pred c---cccCCCCccccccccccc--------cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHc-CCCcCCCCC
Q 011647 226 V---FKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR-GHIDFSSDP 292 (480)
Q Consensus 226 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~ 292 (480)
. .....+++.|+|||++.. .++.++|||||||++|+|++ |..||......+....+.. .....+.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 1 123346678999998642 36789999999999999999 7889987776665555433 333333322
Q ss_pred -CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 -WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 -~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...++..+.+++..|+ .||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 2357888999999998 59999999999976
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=301.75 Aligned_cols=246 Identities=22% Similarity=0.383 Sum_probs=203.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||.||++.+.. +..+|+|.+.... ...+.+.+|+.+++++. |+||+++++.+.. ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecC-CccEEEEecCCCh----hHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeE
Confidence 45789999999999999999998654 5679999876432 23467889999999998 9999999999877 7789
Q ss_pred EEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||++ +..+.+||+|||.+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIE 153 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeecc
Confidence 999999999999998763 357888999999999999999999999999999999999 456789999999987654
Q ss_pred CCCc--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... .....++..|+|||++.. .++.++|+|||||++|++++ |..||.+.+.......+..... .......+.
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 230 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPENCPE 230 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC---CCCcccCCH
Confidence 3221 112345677999998864 47889999999999999998 9999988877766666654422 122356889
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+++.+||..+|++||++.++++
T Consensus 231 ~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 231 ELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHH
Confidence 9999999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=304.05 Aligned_cols=244 Identities=21% Similarity=0.326 Sum_probs=192.2
Q ss_pred ceecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.++++++ ||||+++++++.+....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 46999999999999864 345679999876443 2223356888999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 151 AGGELFDRIIAKG-----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 151 ~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
++++|.+++.... ..++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcc
Confidence 9999999886532 356778889999999999999999999999999999994 56779999999987543222
Q ss_pred c---cccCCCCccccccccccc--------cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH-cCCCcCCCCC
Q 011647 226 V---FKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL-RGHIDFSSDP 292 (480)
Q Consensus 226 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~-~~~~~~~~~~ 292 (480)
. .....|++.|+|||++.+ .++.++||||||+++|+|++ |..||......+...... ......+.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 1 123457888999998753 24789999999999999996 999998766555443322 2222222222
Q ss_pred C-CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 W-PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
. ...+..+.+++.+|+ .+|++|||+++++.
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1 246788999999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=328.64 Aligned_cols=247 Identities=29% Similarity=0.462 Sum_probs=199.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-----
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH----- 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~----- 141 (480)
..|...+.||+||||.||+++++.+|+.||||.+.... ....+++..+|+++|+++. |||||+++++-++..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCccc
Confidence 34666789999999999999999999999999987644 3445688999999999999 999999999865544
Q ss_pred -eEEEEEecCCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-CCCCeeEeecc
Q 011647 142 -SVNLIMDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFG 216 (480)
Q Consensus 142 -~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg 216 (480)
...+|||||.||||...+.+. ..+++.++..++..+..||.|||++|||||||||.||++.... .....||+|||
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 457999999999999999753 4699999999999999999999999999999999999997644 33446999999
Q ss_pred cceecCCCCccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHcCC-----
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAILRGH----- 285 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~~~~~~----- 285 (480)
.|+....+....+.+||+.|.+||++. +.|+.-+|.|||||++|++.||..||...... ++.-.+....
T Consensus 170 ~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 170 AARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA 249 (732)
T ss_pred ccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence 999999888899999999999999986 56899999999999999999999999653322 1222222111
Q ss_pred ----------CcCCC--CCCCCCC----HHHHHHHHHhcccCcCCCC
Q 011647 286 ----------IDFSS--DPWPNIS----SSAKDIVKKMLHADPKERL 316 (480)
Q Consensus 286 ----------~~~~~--~~~~~~~----~~~~~li~~~L~~dp~~R~ 316 (480)
+.+.. +..-.++ ..+...+..+|..+|++|.
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 11110 0111223 2345678889999999998
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=306.05 Aligned_cols=239 Identities=17% Similarity=0.231 Sum_probs=190.8
Q ss_pred eecccCCeEEEEEEEcCC------------------------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC
Q 011647 74 ELGRGQFGVTYLVTHKDT------------------------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (480)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.+++.+. |||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~-h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVS-HIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCC-CCC
Confidence 699999999999975321 2458889875432 223456788899999988 999
Q ss_pred eeEEEEEEEeCCeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC---
Q 011647 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--- 205 (480)
Q Consensus 130 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--- 205 (480)
|+++++++......++||||+++++|..++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888865 46789999999999999999999999999999999999996421
Q ss_pred -CCCCeeEeecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHH
Q 011647 206 -EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAI 281 (480)
Q Consensus 206 -~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll-tg~~pf~~~~~~~~~~~~ 281 (480)
....+|++|||++...... ....++..|+|||.+.+ .++.++||||||+++|+++ +|..||............
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 234 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY 234 (274)
T ss_pred CccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 2335899999988654322 23467888999998854 4789999999999999984 799999877655443322
Q ss_pred HcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
. .....+ ...++.+.++|.+||+.+|++|||+.++|++
T Consensus 235 ~-~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 235 E-KKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred H-hccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 2 222222 2346789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=300.62 Aligned_cols=240 Identities=25% Similarity=0.424 Sum_probs=201.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||.||++.. +++.||+|.+.... ..+.+.+|+.+++++. ||||+++++++... ..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-CcEEE
Confidence 5699999999999999999864 57889999885421 2367889999999998 99999999998654 47999
Q ss_pred EecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||+.+++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceecccc
Confidence 99999999999987643 489999999999999999999999999999999999994 4667999999998764322
Q ss_pred CccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......+..|+|||.+. +.++.++|+||||+++|+|++ |..||......+....+..+.. ......++..+.+
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 228 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR---MEPPEGCPADVYV 228 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC---CCCCCcCCHHHHH
Confidence 22334467899999876 458899999999999999997 9999988887777666655422 1223568899999
Q ss_pred HHHHhcccCcCCCCCHHHHhc
Q 011647 303 IVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+||..+|++||++.++++
T Consensus 229 li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 229 LMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=303.48 Aligned_cols=264 Identities=28% Similarity=0.528 Sum_probs=201.8
Q ss_pred cccc-cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCC-------CCeeEEE
Q 011647 63 EDVR-NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-------RNIVELK 134 (480)
Q Consensus 63 ~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-------p~iv~~~ 134 (480)
+.+. ++|.+.++||+|-|++||+|.+..+.+.||+|+++.... ..+....||++|++++.+ ..||+|+
T Consensus 73 D~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh----YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 73 DVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH----YTEAALDEIKLLQQVREGDPNDPGKKCVVQLL 148 (590)
T ss_pred ccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH----HHHHHHHHHHHHHHHHhcCCCCCCCceeeeee
Confidence 4455 899999999999999999999999999999999865432 236778999999998732 3599999
Q ss_pred EEEE----eCCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCC--
Q 011647 135 GAYE----DRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSA-- 205 (480)
Q Consensus 135 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~-- 205 (480)
+.|. .+.++|+|+|++ |.+|..+|... +.++...++.|++||+.||.|||+ +||||.||||+|||+...+
T Consensus 149 D~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~ 227 (590)
T KOG1290|consen 149 DHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEID 227 (590)
T ss_pred ccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccc
Confidence 9985 567899999999 88999988764 569999999999999999999995 6999999999999974210
Q ss_pred --------------------------------------------------------------------------------
Q 011647 206 -------------------------------------------------------------------------------- 205 (480)
Q Consensus 206 -------------------------------------------------------------------------------- 205 (480)
T Consensus 228 ~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~ 307 (590)
T KOG1290|consen 228 PAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEP 307 (590)
T ss_pred hhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccccccccccc
Confidence
Q ss_pred -----------------------------C--------------------------------------------------
Q 011647 206 -----------------------------E-------------------------------------------------- 206 (480)
Q Consensus 206 -----------------------------~-------------------------------------------------- 206 (480)
.
T Consensus 308 ~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~ 387 (590)
T KOG1290|consen 308 RINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLP 387 (590)
T ss_pred CCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCC
Confidence 0
Q ss_pred --CCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC------hHHH
Q 011647 207 --DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET------EQSI 277 (480)
Q Consensus 207 --~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~------~~~~ 277 (480)
+..|||+|||-|.... ..++.-+.|..|+|||++-+ +|++.+||||++|++|||+||...|.... +++.
T Consensus 388 ~~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH 465 (590)
T KOG1290|consen 388 ECDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH 465 (590)
T ss_pred ccceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence 0025566666665432 23344567889999998765 69999999999999999999999985432 2333
Q ss_pred HHHHHc------------CCCc--C-----------CCCCCC---------CC----CHHHHHHHHHhcccCcCCCCCHH
Q 011647 278 FDAILR------------GHID--F-----------SSDPWP---------NI----SSSAKDIVKKMLHADPKERLSAA 319 (480)
Q Consensus 278 ~~~~~~------------~~~~--~-----------~~~~~~---------~~----~~~~~~li~~~L~~dp~~R~t~~ 319 (480)
+..|.. +... | ...+|+ .+ ..++.+||.-||+.+|++||||.
T Consensus 466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~ 545 (590)
T KOG1290|consen 466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA 545 (590)
T ss_pred HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence 332211 1100 0 011222 12 35678999999999999999999
Q ss_pred HHhcCCcccccCCC
Q 011647 320 EVLNHPWMRVDGDA 333 (480)
Q Consensus 320 ~~l~h~~~~~~~~~ 333 (480)
++|+|||+.....+
T Consensus 546 ~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 546 QCLKHPWLNPVAGP 559 (590)
T ss_pred HHhcCccccCCCCC
Confidence 99999999855443
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=304.79 Aligned_cols=245 Identities=24% Similarity=0.399 Sum_probs=199.6
Q ss_pred ceecccCCeEEEEEEEcCCC------ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 73 RELGRGQFGVTYLVTHKDTK------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
+.||+|+||.||+|.++... ..+|+|.+.... .......+.+|+.+++.+. ||||+++++++......++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEE
Confidence 36899999999999986543 689999875432 2234567889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeeccc
Q 011647 147 MDLCAGGELFDRIIAK-------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGL 217 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~ 217 (480)
|||+++++|.+++... ..+++..+..++.|++.||.|||+++++|+||||+||+++.++ ....++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999988642 3478899999999999999999999999999999999996533 233799999999
Q ss_pred ceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 218 SVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 218 a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
+........ .....++..|+|||++. +.++.++|||||||++|+|++ |..||......+....+..+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~ 234 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL---QK 234 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc---CC
Confidence 876533221 12234567899999886 458999999999999999998 99999887776666655443211 12
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...+|..+.++|.+||..+|.+||++.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2467899999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=302.34 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=190.4
Q ss_pred ceecccCCeEEEEEEEcCC------------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 73 RELGRGQFGVTYLVTHKDT------------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
+.||+|+||+||+|..... ...||+|.+... .......+.+|+.++..+. ||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVS-HKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 4689999999999985322 235888887543 2233457888999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC----CCCeeEeec
Q 011647 141 HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE----DSPLKATDF 215 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~----~~~ikl~Df 215 (480)
...++||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||+...+. ...++++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999999888765 356999999999999999999999999999999999999964221 123899999
Q ss_pred ccceecCCCCccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
|++...... ....|+..|+|||.+. ..++.++|||||||++|+|+ +|..||......+... ........
T Consensus 157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~~---- 228 (262)
T cd05077 157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCML---- 228 (262)
T ss_pred CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCccC----
Confidence 998754322 3346788999999875 35888999999999999997 5888887655443322 22222221
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
....+.++.+||.+||+.||++||++.+++++
T Consensus 229 ~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 229 VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 12346789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=325.39 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=219.1
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-----
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----- 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~----- 138 (480)
+..+.|.+.+.||.|.+|.||+++++.+++..|+|+..... +.-+.++.|.++|+.+..|||++.++++|.
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 34567999999999999999999999999999999986543 334778899999999999999999999985
Q ss_pred eCCeEEEEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
.++.+++|||||.||+.-|+++. ..++.|+.+..|++.++.||.|||.+.++|||||-.|||++ .++.|||+|||
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFG 168 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFG 168 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeee
Confidence 45689999999999999998865 46799999999999999999999999999999999999995 46669999999
Q ss_pred cceecCCCC-ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 217 LSVFFKPGD-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 217 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
.+....... ...+.+|||.|||||++. ..|+..+|+||||++..||..|.+|+....+...+-.|-+.. +..
T Consensus 169 vSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNP-PPk 247 (953)
T KOG0587|consen 169 VSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-PPK 247 (953)
T ss_pred eeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCC-Ccc
Confidence 998775443 345679999999999984 237788999999999999999999998777655444443322 222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
...+...+.++.++|..||.+|-++||+..++|+|||.+
T Consensus 248 Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~ 286 (953)
T KOG0587|consen 248 LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT 286 (953)
T ss_pred ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence 333567789999999999999999999999999999999
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=300.61 Aligned_cols=242 Identities=24% Similarity=0.375 Sum_probs=193.2
Q ss_pred ceecccCCeEEEEEEEcC---CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-eCCeEEEEEe
Q 011647 73 RELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE-DRHSVNLIMD 148 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e 148 (480)
+.||+|+||.||+|.+.. .+..||+|.+... ......+.+.+|+.+++.++ ||||+++++++. .++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEe
Confidence 468999999999998653 3457999987532 23344577889999999997 999999999765 4566889999
Q ss_pred cCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC--
Q 011647 149 LCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (480)
Q Consensus 149 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-- 225 (480)
|+.+++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+|||++ .++.+||+|||++.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCccccccccCCcce
Confidence 99999999998764 3467888899999999999999999999999999999994 56679999999987643221
Q ss_pred ---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 226 ---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 226 ---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
......++..|+|||.+. ..++.++||||||+++|+|++ |.+||...........+..+.... ....++..+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLL---QPEYCPDPL 231 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC---CCCcCCHHH
Confidence 112334577899999875 458899999999999999999 566777766666665555443211 113468899
Q ss_pred HHHHHHhcccCcCCCCCHHHHhc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+++.+||..+|++||++.++++
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=305.01 Aligned_cols=248 Identities=25% Similarity=0.414 Sum_probs=195.6
Q ss_pred cceeecceecccCCeEEEEEEE----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--C
Q 011647 67 NTYIFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--R 140 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~ 140 (480)
..|++.+.||+|+||+||+|.. ..++..||+|.+... .....+.+.+|+++++++. ||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCC
Confidence 4688999999999999999984 456889999998543 2344567899999999998 9999999997643 3
Q ss_pred CeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
..+++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccc
Confidence 5689999999999999998764 468999999999999999999999999999999999999 456779999999998
Q ss_pred ecCCCCcc----ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH---------------HHH
Q 011647 220 FFKPGDVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQS---------------IFD 279 (480)
Q Consensus 220 ~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---------------~~~ 279 (480)
........ ....++..|+|||++.+ .++.++||||||+++|||++|..|+....... .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 76433211 11223456999998864 58889999999999999999877764332110 001
Q ss_pred HHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+......+ +....++.++.+|+.+||..+|++|||+.++++
T Consensus 237 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 237 ELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111111111 122467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=307.38 Aligned_cols=248 Identities=22% Similarity=0.337 Sum_probs=200.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..|+..+.||+|+||.||+|.+..++. .||+|.+.... .......+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMD-HPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCC-C
Confidence 568889999999999999999877765 47888875432 2233456889999999997 99999999998654 4
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++. .++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEccccccccc
Confidence 679999999999999987654 589999999999999999999999999999999999994 4667999999999875
Q ss_pred CCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+. .++. .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~ 236 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLPQ--PPIC 236 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CCCC--CCCC
Confidence 43221 122345678999998864 58899999999999999997 899998776655554444332 2222 2457
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.++.+++.+||..+|++||++.++++.
T Consensus 237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 237 TIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=301.41 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=190.6
Q ss_pred ceecccCCeEEEEEEEcCCC----------ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 73 RELGRGQFGVTYLVTHKDTK----------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+.||+|+||.||+|.+..++ ..+++|.+..... ....+.+|+.+++++. ||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCC-CcchhheeeEEec-CC
Confidence 46999999999999998776 3577887653321 1577889999999998 9999999999887 77
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC----CCCCeeEeeccc
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA----EDSPLKATDFGL 217 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~----~~~~ikl~Dfg~ 217 (480)
.++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++.++ ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999998766 799999999999999999999999999999999999996433 122699999999
Q ss_pred ceecCCCCccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
+..... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||............... ...+.
T Consensus 155 a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~--- 227 (259)
T cd05037 155 PITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPM--- 227 (259)
T ss_pred cccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCC---
Confidence 886543 223457788999999864 47889999999999999999 58888766543333322211 11111
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+.++|.+||..+|.+|||+.++++
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 228 -PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 12378999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=336.81 Aligned_cols=249 Identities=27% Similarity=0.444 Sum_probs=212.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCc-----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ-----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...-.+.+.||+|+||.||.|....... .||||.+.+ ..+......|.+|..+|+++. |||||++++++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--~~~~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--LSSEQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--cCCHHHHHHHHHHHHHHhcCC-CcceeeEEEeecCC
Confidence 3456778899999999999999765433 488888754 345667789999999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK-------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
+..+|++|||+||+|..+|.+. ..++......++.+|++|+.||+++++|||||...|+|+ +....+||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEc
Confidence 9999999999999999999875 348899999999999999999999999999999999999 456889999
Q ss_pred ecccceecCCCCcccc-C--CCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcC
Q 011647 214 DFGLSVFFKPGDVFKD-L--VGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 214 Dfg~a~~~~~~~~~~~-~--~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|||+|+.+...+.+.. . .-...|||||.+. +.++.++|||||||++||++| |..||......+++.....+. ..
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL 923 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RL 923 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-cc
Confidence 9999996544332221 1 2235799999987 669999999999999999998 899999999988888666554 22
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+.+|..+.+++..||+.+|++||+...+++
T Consensus 924 --~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 --DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --CCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 233578999999999999999999999999998
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=305.95 Aligned_cols=249 Identities=16% Similarity=0.208 Sum_probs=186.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcH--------HHHHHHHHHHHHccCCCCeeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDV--------EDVRREVQIMHHLTGHRNIVEL 133 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~--------~~~~~e~~~l~~l~~hp~iv~~ 133 (480)
..++|.+.+.||+|+||+||+|.+..+ +..+|+|+............ .....+...+..+. |+||+++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~ 88 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID-HLGIPKY 88 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC-CCCCCcE
Confidence 346899999999999999999999877 67788886432221100000 01112233344555 9999999
Q ss_pred EEEEEeCC----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCC
Q 011647 134 KGAYEDRH----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 134 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
++++.... ..+++++++. .++.+.+......++..+..++.|++.||.|||++||+||||||+|||++ .++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~~~~ 164 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---GNNR 164 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCc
Confidence 98765443 3468888874 46767666655678999999999999999999999999999999999994 4667
Q ss_pred eeEeecccceecCCCC--------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHH--
Q 011647 210 LKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QSI-- 277 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~-- 277 (480)
++|+|||+++.+.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 9999999998653221 1123469999999998865 489999999999999999999999987632 221
Q ss_pred ------HHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 278 ------FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...+..+.. ..+..++.+.+++..|+..+|++||+++++++
T Consensus 245 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 222222222 23456889999999999999999999999875
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=300.65 Aligned_cols=247 Identities=23% Similarity=0.390 Sum_probs=199.4
Q ss_pred eeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC----
Q 011647 69 YIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~---- 141 (480)
|.+.+.||+|+||.||+|.+. .+++.||||++.... ......+.+.+|+++++++. ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCc
Confidence 677889999999999999864 357899999986533 23345677889999999998 999999999875432
Q ss_pred --eEEEEEecCCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 142 --SVNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 142 --~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
..+++++|+.+++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++ .++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEEC
Confidence 247889999999998877532 2478999999999999999999999999999999999994 56779999
Q ss_pred ecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcC
Q 011647 214 DFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 214 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|||+++....... .....+++.|++||.+.. .++.++|||||||++|+|++ |.+||.+.........+......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 234 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL- 234 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 9999886543221 122345678999998764 47889999999999999999 89999887776666655543321
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
. ..+..+..+.+++.+||..+|++|||+.+++.
T Consensus 235 ~--~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 235 K--QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred C--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1 12357889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=305.95 Aligned_cols=252 Identities=22% Similarity=0.372 Sum_probs=210.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
.++...++++||+|-||.|.+|.-.. +..||||.++... +......|.+|+++|.+|+ |||||+++++|..++.++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA--TKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecC-ceEEEEeecCccc--chhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchH
Confidence 45677889999999999999998765 6889999997654 3344688999999999997 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|+||++.|+|.+++.++. ....+...+|+.||+.|++||.+.++|||||.+.|+|+ +.+.++||+|||+++.+.
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccc
Confidence 9999999999999998763 33456667899999999999999999999999999999 778999999999999776
Q ss_pred CCCccc---cCCCCccccccccc-cccCCCchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHcCCCcCC----CCC
Q 011647 223 PGDVFK---DLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLS--GVPPFWGETEQSIFDAILRGHIDFS----SDP 292 (480)
Q Consensus 223 ~~~~~~---~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~llt--g~~pf~~~~~~~~~~~~~~~~~~~~----~~~ 292 (480)
.++.+. ..+-..+|||||.+ .++++.++|+|+||+++||+++ ...||...++++..++...-...-. ...
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~ 768 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR 768 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC
Confidence 655433 23446789999965 6889999999999999999764 7889998888888776543211111 112
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+-++..+.+++.+|+..|-++||+.+++..
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 2457889999999999999999999999843
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=296.97 Aligned_cols=244 Identities=18% Similarity=0.307 Sum_probs=191.2
Q ss_pred ceecccCCeEEEEEEEcCC--CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTHKDT--KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+.||+|+||+||+|..... ...+++|.+.... .....+.+.+|+.+++.++ ||||+++++.+......++||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYC 77 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecC
Confidence 3699999999999975433 3456677665332 2234578899999999997 999999999999999999999999
Q ss_pred CCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 151 AGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 151 ~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
++++|.+++... ..+++..+..++.||+.||.|||+.+++||||||+|||+ +.++.++|+|||++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchh
Confidence 999999988753 346777888999999999999999999999999999999 456779999999986432211
Q ss_pred --ccccCCCCccccccccccc--------cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCC-CcCCCCC-
Q 011647 226 --VFKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH-IDFSSDP- 292 (480)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~-~~~~~~~- 292 (480)
......|+..|+|||++.. .++.++||||||+++|+|++ |..||......+....+.... .....+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc
Confidence 1234568889999998742 24678999999999999997 577888777766666554332 2222221
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...+++.+.+++..|+ .+|++||++.++++
T Consensus 235 ~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 235 ELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 2347889999999999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=301.78 Aligned_cols=249 Identities=27% Similarity=0.423 Sum_probs=199.6
Q ss_pred cceeecceecccCCeEEEEEEEcC----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--C
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKD----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--R 140 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~ 140 (480)
..|.+.+.||+|+||.||+|.... ++..||||.+...... ...+.+.+|+++++.+. ||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLD-HENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCC-CCChheEEeeeecCCC
Confidence 457888999999999999998653 4789999998654321 34578999999999997 9999999999877 5
Q ss_pred CeEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++ .++.++|+|||.+.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEccccccc
Confidence 67999999999999999987654 599999999999999999999999999999999999994 46789999999998
Q ss_pred ecCCCCcc----ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHH--------------HHHH
Q 011647 220 FFKPGDVF----KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQS--------------IFDA 280 (480)
Q Consensus 220 ~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--------------~~~~ 280 (480)
........ ....++..|+|||.+. ..++.++||||||+++|+|++|..|+....... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76532211 1224456799999875 458889999999999999999999986543211 1111
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
........+. ....+.++.+++.+||..+|++|||+.++++
T Consensus 238 ~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 2222222221 2356789999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=309.22 Aligned_cols=261 Identities=23% Similarity=0.401 Sum_probs=217.2
Q ss_pred cccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC-----CCCeeEEEE
Q 011647 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-----HRNIVELKG 135 (480)
Q Consensus 61 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----hp~iv~~~~ 135 (480)
.++.+..+|.+....|+|-|++|.+|.+...|..||||+|..... ..+.=.+|+++|++|.+ --++++++.
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 345677899999999999999999999999999999999976432 22445689999999973 337899999
Q ss_pred EEEeCCeEEEEEecCCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
.|...+++|||+|-+ ..+|.+.|.+.|. |....+..+++|+..||..|-.+||+|.||||+|||++ .....+||
T Consensus 502 ~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKL 578 (752)
T KOG0670|consen 502 HFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKL 578 (752)
T ss_pred HhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeee
Confidence 999999999999988 5699999988764 88899999999999999999999999999999999996 45677999
Q ss_pred eecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC
Q 011647 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291 (480)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 291 (480)
||||.|..+..+.. +....+..|.|||++-| .|+...|+||+||+||||+||+..|.|.+...++.........||..
T Consensus 579 CDfGSA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 579 CDFGSASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred ccCccccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence 99999988765443 44556778999998766 69999999999999999999999999999888777654433333321
Q ss_pred CC-------------------------------------------------CCCC-------HHHHHHHHHhcccCcCCC
Q 011647 292 PW-------------------------------------------------PNIS-------SSAKDIVKKMLHADPKER 315 (480)
Q Consensus 292 ~~-------------------------------------------------~~~~-------~~~~~li~~~L~~dp~~R 315 (480)
.. +.++ ..+++|+.+||..||++|
T Consensus 658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 10 0111 357899999999999999
Q ss_pred CCHHHHhcCCcccc
Q 011647 316 LSAAEVLNHPWMRV 329 (480)
Q Consensus 316 ~t~~~~l~h~~~~~ 329 (480)
.|+.++|.||||..
T Consensus 738 it~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 738 ITVNQALKHPFITE 751 (752)
T ss_pred CCHHHHhcCCcccC
Confidence 99999999999973
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=288.96 Aligned_cols=260 Identities=30% Similarity=0.483 Sum_probs=211.2
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+..+|.-.+.+|.|+- .|..|.+.-++++||+|.+... ..+.....+..+|..++..+. |+||++++.+|.-.
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l 90 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTL 90 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccH
Confidence 34467888899999998 8888999999999999988654 555666788999999999998 99999999998533
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...|+|||+|. .+|...+. -.++-+.+..++.|+++|+.|||+.||+||||||+||++ ..+..+||.|||+
T Consensus 91 ~~~~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 91 EEFQEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGL 164 (369)
T ss_pred HHHHhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchh
Confidence 35889999994 58887776 347889999999999999999999999999999999999 5577899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC-----------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------- 285 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~----------- 285 (480)
|+.....-..+..+.|..|.|||++-+ ++...+||||+||++.||++|+..|.|.+..+.+.++....
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred hcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 997665545677889999999998754 58999999999999999999999998776544443332100
Q ss_pred ----------------C----cCCCCCCC-------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 286 ----------------I----DFSSDPWP-------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 286 ----------------~----~~~~~~~~-------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
. .++...|+ .-+..+++++.+||..||++|.+++++|+|||+++...
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~ 318 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYD 318 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeecc
Confidence 0 11111121 12356899999999999999999999999999995543
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=319.58 Aligned_cols=248 Identities=30% Similarity=0.461 Sum_probs=199.0
Q ss_pred eeecceecccCCeE-EEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 69 YIFGRELGRGQFGV-TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 69 y~~~~~lG~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
|.-.+.+|.|+.|+ ||+|... |+.||||.+-.. ......+|+..|+..+.|||||++++.-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44457789998887 8999885 689999987542 33678899999999999999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeecccceec
Q 011647 148 DLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFF 221 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~a~~~ 221 (480)
|+| ..+|.+++...+. ......+.++.|++.||+|||+.+||||||||+||||...+ ....++|+|||+++.+
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 5699999987411 11144578899999999999999999999999999998642 3357899999999987
Q ss_pred CCCCc----cccCCCCcccccccccccc-CCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 222 KPGDV----FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..+.. .....||-+|+|||++... ...++|||||||++|+.++| ..||...-.+ -.+|..+......-. +.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~-~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLE-PL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeec-cC
Confidence 65542 3456799999999999754 56789999999999999986 8899654433 345666655443211 11
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
...++.+||.+||.++|..||+|.++|.||||=
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 112899999999999999999999999999994
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=285.06 Aligned_cols=242 Identities=43% Similarity=0.761 Sum_probs=206.4
Q ss_pred CCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCchHHH
Q 011647 79 QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDR 158 (480)
Q Consensus 79 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 158 (480)
+||.||+|.+..+++.+|+|++........ .+.+.+|++.++++. |+||+++++++......++++||+.+++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999999999999999865433221 578999999999996 99999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccccc
Q 011647 159 IIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238 (480)
Q Consensus 159 l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~a 238 (480)
+.....++...+..++.+++.++.+||+.|++|+||+|.||+++ .++.++|+|||.+.............++..|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 88776799999999999999999999999999999999999995 457799999999988765544556678999999
Q ss_pred ccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCC
Q 011647 239 PEVLR-RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL 316 (480)
Q Consensus 239 PE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 316 (480)
||.+. ..++.++||||||++++++++|..||.. .........+......... ....++.++.+++.+||..+|++||
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP-PEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc-ccccCCHHHHHHHHHHccCCchhcc
Confidence 99886 4578899999999999999999999987 4555555544443333221 2222889999999999999999999
Q ss_pred CHHHHhcCCcc
Q 011647 317 SAAEVLNHPWM 327 (480)
Q Consensus 317 t~~~~l~h~~~ 327 (480)
++.++++||||
T Consensus 234 ~~~~~~~~~~~ 244 (244)
T smart00220 234 TAEEALQHPFF 244 (244)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=307.57 Aligned_cols=259 Identities=22% Similarity=0.296 Sum_probs=187.7
Q ss_pred cccceeecceecccCCeEEEEEEEc----------------CCCceEEEEEecccccCCh-----------hcHHHHHHH
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK----------------DTKQQFACKSISSRKLINR-----------DDVEDVRRE 117 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~----------------~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e 117 (480)
..++|.+.++||+|+||+||+|... ..++.||||.+........ ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4568999999999999999999752 2356799999854321100 011233457
Q ss_pred HHHHHHccCCCC-----eeEEEEEEEe--------CCeEEEEEecCCCCchHHHHHhc----------------------
Q 011647 118 VQIMHHLTGHRN-----IVELKGAYED--------RHSVNLIMDLCAGGELFDRIIAK---------------------- 162 (480)
Q Consensus 118 ~~~l~~l~~hp~-----iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~---------------------- 162 (480)
+.++.++. |.+ +++++++|.. .+..++||||+++++|.+++...
T Consensus 223 ~~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 223 AYMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 77777776 443 3566666542 45689999999999999887532
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcccc--CCCCccccc
Q 011647 163 --GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVA 238 (480)
Q Consensus 163 --~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~--~~gt~~y~a 238 (480)
..+++..++.++.|++.+|.|||+.+|+||||||+|||++ .++.+||+|||++........... ..+|+.|+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 1245677889999999999999999999999999999994 456799999999976543332222 245889999
Q ss_pred ccccccc---------------------C--CCchhHHHHHHHHHHHHhCCC-CCCCCCh-----------HHHHHHHHc
Q 011647 239 PEVLRRN---------------------Y--GAEADIWSAGVILYILLSGVP-PFWGETE-----------QSIFDAILR 283 (480)
Q Consensus 239 PE~~~~~---------------------~--~~~~DiwslG~il~~lltg~~-pf~~~~~-----------~~~~~~~~~ 283 (480)
||++... + ..+.||||+||++|+|++|.. ||..... ...+.....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 9987421 1 124799999999999999876 6643211 111112222
Q ss_pred CCCcCCCCCCCCCCHHHHHHHHHhcccCc---CCCCCHHHHhcCCcccc
Q 011647 284 GHIDFSSDPWPNISSSAKDIVKKMLHADP---KERLSAAEVLNHPWMRV 329 (480)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp---~~R~t~~~~l~h~~~~~ 329 (480)
.... ...+...++...+|+.+||..+| .+|+|++|+|+||||..
T Consensus 459 ~~~~--~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 459 QKYD--FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cCCC--cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 2333 33466789999999999999876 68999999999999964
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=305.90 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=212.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCC---ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
...+.++||+|.||+|++|.++..+ -.||||++....... ....|.+|+.+|.+|. |||+++||++..+ ....
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhcc-CcceeEEeeeecc-chhh
Confidence 4556789999999999999987532 369999997655432 5688999999999999 9999999999876 7788
Q ss_pred EEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|||+++.|+|.+.|.+ ...|.......++.||+.|+.||.++++|||||-..|+|+.+ ...|||+|||+.+.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas---prtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS---PRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---cceeeeecccceeccC
Confidence 99999999999999987 345888999999999999999999999999999999999954 5679999999999887
Q ss_pred CCCccccCC----CCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDVFKDLV----GSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~~~~~~----gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
.++...... -...|+|||.++ +.++.++|||++||++|||+| |..||-+.....+++.|..+ ..++. .+.+
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~-erLpR--Pk~c 340 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG-ERLPR--PKYC 340 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc-ccCCC--CCCC
Confidence 655433222 234699999997 569999999999999999998 88999999999999988743 33333 2568
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
|+++.+++..||..+|.+|||+..|.+.-+...
T Consensus 341 sedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 999999999999999999999999976555543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=285.94 Aligned_cols=255 Identities=26% Similarity=0.452 Sum_probs=206.3
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-----eE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----SV 143 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-----~~ 143 (480)
..-.+.||-|+||+||.+.+..+|+.||+|.+.. -..+-...+++.+|+++|..++ |.|++..+++.+... .+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHH
Confidence 3445799999999999999999999999998753 2223334578899999999998 999999988765443 46
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|+|+|+| ..+|...+.+...++...++-+++||++||+|||+.||.||||||.|+|+ +.+..+||||||+++....
T Consensus 133 YV~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccch
Confidence 7889999 55999999999999999999999999999999999999999999999999 4578899999999997654
Q ss_pred CC--ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHc----------------
Q 011647 224 GD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR---------------- 283 (480)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~---------------- 283 (480)
.+ ..+..+-|.+|.|||++.| .|+.+.||||.|||+.||+..+..|....+.+.++.|..
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 33 2344567899999999875 599999999999999999999999988777665555421
Q ss_pred -------CCCcCCCCC-C------CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 284 -------GHIDFSSDP-W------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 284 -------~~~~~~~~~-~------~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
+....+..+ . ..-..+...++.++|..||++|++.++++.|++...
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 111111100 0 122356788999999999999999999999999864
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=297.80 Aligned_cols=246 Identities=28% Similarity=0.457 Sum_probs=206.8
Q ss_pred cceeecceecccCCeEEEEEEEcCC----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDT----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
....+.+.||.|-||.||+|....- .-.||||.-+.. .+.+..+.|..|.-+|++++ ||||++++|++. +..
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--~t~d~tekflqEa~iMrnfd-HphIikLIGv~~-e~P 464 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--CTPDDTEKFLQEASIMRNFD-HPHIIKLIGVCV-EQP 464 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC--CChhhHHHHHHHHHHHHhCC-Ccchhheeeeee-ccc
Confidence 3445667899999999999987543 234888876432 34555799999999999998 999999999986 456
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+||||+++-|.|..++..+ ..++......+++||+.||.|||+.++|||||-..|||+.+ ...|||+|||+++.+
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---p~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---PQCVKLADFGLSRYL 541 (974)
T ss_pred eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---cceeeecccchhhhc
Confidence 89999999999999999865 46999999999999999999999999999999999999965 455999999999998
Q ss_pred CCCCccccCCCC--cccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 222 KPGDVFKDLVGS--AYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 222 ~~~~~~~~~~gt--~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.....+....|. ..|||||-++ ..++.++|||.|||.+||++. |..||.+....+++-.+.++.... ..+++|
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP---~P~nCP 618 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP---CPPNCP 618 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC---CCCCCC
Confidence 776665554553 4599999887 468999999999999999876 999999988888877777765422 235899
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHh
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVL 322 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l 322 (480)
+.+..|+.+||..+|.+||...++.
T Consensus 619 p~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 619 PALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred hHHHHHHHHHhccCcccCCcHHHHH
Confidence 9999999999999999999877664
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=295.93 Aligned_cols=243 Identities=24% Similarity=0.435 Sum_probs=211.1
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
......+||-|.||.||.|.++.-.-.||||.++.. ...++.|..|..+|+.+. |||+|+++++|..+..+|||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEE
Confidence 344557899999999999999998889999998653 346789999999999998 999999999999999999999
Q ss_pred ecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 148 DLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||..|+|.++|.+..+ ++.-....++.||..|++||..+++|||||-..|+|+ +++..||++|||+++.+.. +
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtg-D 418 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTG-D 418 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcC-C
Confidence 99999999999987554 7777888999999999999999999999999999999 7788899999999998754 4
Q ss_pred ccccCCCC---ccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 226 VFKDLVGS---AYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 226 ~~~~~~gt---~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.++...|. ..|.|||-+.- .++.++|||+|||+|||+.| |-.||.+.+-..++..+.++. .......+|+..
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy---RM~~PeGCPpkV 495 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY---RMDGPEGCPPKV 495 (1157)
T ss_pred ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc---cccCCCCCCHHH
Confidence 45555554 46999998864 58999999999999999987 889999988877777665542 333446899999
Q ss_pred HHHHHHhcccCcCCCCCHHHHh
Q 011647 301 KDIVKKMLHADPKERLSAAEVL 322 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l 322 (480)
.+|++.||+++|.+||+.+++-
T Consensus 496 YeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 496 YELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred HHHHHHHhcCCcccCccHHHHH
Confidence 9999999999999999999984
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=257.55 Aligned_cols=213 Identities=24% Similarity=0.368 Sum_probs=180.0
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+....+..||+|++|.|-+.++..+|...|+|.+... .+.....++.+|+.+..+...+|++|.+++.+..++.++|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t--vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT--VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh--cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34455678999999999999999999999999999643 3455667889999999888889999999999999999999
Q ss_pred EEecCCCCchHHH----HHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 146 IMDLCAGGELFDR----IIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 146 v~e~~~~~~L~~~----l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.||.| ..+|..+ +...+.++|..+-+|+.-++.||+|||++ .+||||+||+|||+ +..+++|+||||++-.
T Consensus 123 cME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 123 CMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGY 198 (282)
T ss_pred eHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEccccccee
Confidence 99999 4577543 34567899999999999999999999975 89999999999999 5688899999999987
Q ss_pred cCCCCccccCCCCccccccccccc-----cCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcC
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRG 284 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~ 284 (480)
+..+-..+--.|...|||||.+.. .|+-++||||||+++.||.+++.||.. .++.+.+.++...
T Consensus 199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 765444444578899999998752 588899999999999999999999965 4566666666553
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=305.92 Aligned_cols=247 Identities=23% Similarity=0.432 Sum_probs=214.1
Q ss_pred ceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
.-.|.+.||.|.||.||+|+.+..|+ .||||.++.. ........|..|+.||-++. ||||++|.++......+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeE
Confidence 34677889999999999999987664 5999998643 35556678999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||.|||++|+|..+|..+ +.|+..++.-+++.|+.|+.||-+.|+|||||-..|||+ +.+..+|++|||+++.+.+
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeeccc
Confidence 999999999999999764 679999999999999999999999999999999999999 4577899999999998754
Q ss_pred CC--ccccCCC--Ccccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 224 GD--VFKDLVG--SAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 224 ~~--~~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
+. ..++.-| ..+|.|||.+. ++++.++||||+|++|||.++ |..||+..+.++.+..|..+.- .++....|
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR---LPpPmDCP 860 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR---LPPPMDCP 860 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC---CCCCCCCc
Confidence 43 2222223 35799999986 679999999999999999876 9999999999999999987643 33345899
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..+..|+..||++|-.+||...+|+.
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99999999999999999999999976
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=299.30 Aligned_cols=260 Identities=27% Similarity=0.484 Sum_probs=223.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
+.+++|.+..++|+|+||.||+|+++.++...|+|+++.. ....+.-+..|+-+++.++ |||||.+++.|.....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCC-CcChHHHHhhhhhhcCc
Confidence 4457899999999999999999999999999999999644 4466778889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+|+||||.||+|.+...-.+.+++.++...++..+.+|+|||+.|=+|||||-.|||++ +.+.+|++|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhhh
Confidence 99999999999999888889999999999999999999999999999999999999995 456699999999876643
Q ss_pred C-CccccCCCCccccccccc----cccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC-CCCCCCCC
Q 011647 224 G-DVFKDLVGSAYYVAPEVL----RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-SDPWPNIS 297 (480)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 297 (480)
. .....+.|||+|||||+. ++.|...+|||++|++..|+-.-.+|.....+...+.......+..+ .......+
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccch
Confidence 3 234678999999999975 36799999999999999999988888766666555544444443332 22223578
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.+-+|++.+|.++|.+|||++.+|.|||....
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 899999999999999999999999999999866
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=279.88 Aligned_cols=256 Identities=27% Similarity=0.463 Sum_probs=203.2
Q ss_pred cccccceeecceecccCCeEEEEEEEcC---CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..+.+.|..+++||+|+|++||++.+.. .++.||+|.+.... ...++.+|+++|..+.++.||+.+.+++..
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 4456779999999999999999999877 78899999886432 236799999999999999999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
++...+||||++..+-.++.. .++...+..+++.++.||.++|.+|||||||||+|+|.+. ..+.-.|+|||+|.
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQ 181 (418)
T ss_pred CCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechhHH
Confidence 999999999999877777664 4678999999999999999999999999999999999974 45567899999987
Q ss_pred ecC-----------------C--CC--------------------------ccccCCCCcccccccccc--ccCCCchhH
Q 011647 220 FFK-----------------P--GD--------------------------VFKDLVGSAYYVAPEVLR--RNYGAEADI 252 (480)
Q Consensus 220 ~~~-----------------~--~~--------------------------~~~~~~gt~~y~aPE~~~--~~~~~~~Di 252 (480)
... . +. ..-...||++|.|||++- +..++++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 210 0 00 001246999999999985 458899999
Q ss_pred HHHHHHHHHHHhCCCCCCCCChH-HHHHHH--------------HcCC-------------------CcC----------
Q 011647 253 WSAGVILYILLSGVPPFWGETEQ-SIFDAI--------------LRGH-------------------IDF---------- 288 (480)
Q Consensus 253 wslG~il~~lltg~~pf~~~~~~-~~~~~~--------------~~~~-------------------~~~---------- 288 (480)
||.|+|+..+++++.||....+. ..+..+ .-+. ...
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 99999999999999999653321 000000 0000 000
Q ss_pred ----CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 289 ----SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 289 ----~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
........+..+.+|+.+||..||.+|+|++++|+||||.
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~ 385 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD 385 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence 0001123456889999999999999999999999999998
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=322.87 Aligned_cols=240 Identities=23% Similarity=0.294 Sum_probs=182.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|...+.||+|+||.||+|.+..++..||||.+..... ....|++.+++++ |||||++++++.+....++|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEE
Confidence 345666789999999999999998999999998854321 1234688899997 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH---SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|||+++|+|.+++. .+++..+..++.|++.||+||| +.+|+||||||+||+++. +...++. ||.......
T Consensus 762 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~---~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 762 HEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG---KDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC---CCceEEE-ecccccccc
Confidence 99999999999885 3899999999999999999999 679999999999999953 4445554 665543221
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH---cC-C------CcCCC
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAIL---RG-H------IDFSS 290 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~---~~-~------~~~~~ 290 (480)
. ....||+.|+|||++.+ .++.++|||||||++|||++|+.||..... ........ .. . .....
T Consensus 835 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 835 D---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred C---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence 1 23468899999998864 589999999999999999999999854221 11111000 00 0 00000
Q ss_pred C--CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 291 D--PWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 291 ~--~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
. .......++.+++.+||+.||++|||+.++++.
T Consensus 912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0 000112356789999999999999999999864
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=282.74 Aligned_cols=201 Identities=31% Similarity=0.523 Sum_probs=177.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhc-----HHHHHHHHHHHHHcc--CCCCeeEEEEEEEe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD-----VEDVRREVQIMHHLT--GHRNIVELKGAYED 139 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~ 139 (480)
..|...+.+|.|+||.|++|.++.+...|+||.+.+.+..-... .-.+--||+||+.+. .|+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45899999999999999999999999999999998765432222 233567999999986 48999999999999
Q ss_pred CCeEEEEEecC-CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 140 RHSVNLIMDLC-AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
++++||+||-- +|.+|++++..+.+++|.++..|++|++.|+++||+.||||||||-+||.+ +.+|-+||+|||.+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsa 717 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSA 717 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccch
Confidence 99999999976 457999999999999999999999999999999999999999999999999 56788999999999
Q ss_pred eecCCCCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWG 271 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~ 271 (480)
..... ..+..++||..|.|||+++|. .+..-|||+||++||.+.....||+.
T Consensus 718 a~~ks-gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AYTKS-GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhcC-CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 87654 456778999999999999874 58889999999999999999999864
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=293.30 Aligned_cols=250 Identities=24% Similarity=0.421 Sum_probs=207.6
Q ss_pred ccceeecceecccCCeEEEEEEEcC-------CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
..+..+.+.||+|+||.|++|.... ....||||.++.... ..+.+.+..|+++|+.+..||||+.+++++.
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 3445677799999999999997542 145799999865443 3567889999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 202 (480)
..+.+++|+||+..|+|.+++...+ .++......++.||+.|++||+++.+|||||-..|||+
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi- 451 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI- 451 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe-
Confidence 9999999999999999999998765 38889999999999999999999999999999999999
Q ss_pred cCCCCCCeeEeecccceecCCCCccc--cCCC--Cccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCC-hH
Q 011647 203 SSAEDSPLKATDFGLSVFFKPGDVFK--DLVG--SAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGET-EQ 275 (480)
Q Consensus 203 ~~~~~~~ikl~Dfg~a~~~~~~~~~~--~~~g--t~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~-~~ 275 (480)
..+..+||+|||+|+......... ...| ...|||||.+.. .++.++||||+|++|||++| |..||.+.. ..
T Consensus 452 --~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 452 --TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred --cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 567789999999999765444332 1222 234999999875 59999999999999999998 889998855 56
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+.+..+.... .....+.++.+++..||+.+|++||+..++.+
T Consensus 530 ~l~~~l~~G~r~~---~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 530 ELLEFLKEGNRME---QPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 6666565554322 12356999999999999999999999999864
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=265.49 Aligned_cols=242 Identities=23% Similarity=0.340 Sum_probs=185.8
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc-CCCCeeEEEEEEEeCC----e
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-GHRNIVELKGAYEDRH----S 142 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~hp~iv~~~~~~~~~~----~ 142 (480)
...+.+.||+|.||.||+|.... +.||||++.. .+.+.+.+|-.|..-.. .|+||+++++.-.... .
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~--~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN--RLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhccC--ceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 35567889999999999999864 8999999853 34577888887776432 4999999999865554 7
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeecCCCCcceecccCCCCCCeeEe
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM---------GVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
++||++|.+.|+|.++|..+ .+++....+++.-|++||+|||+. .|+|||||..|||| ..+.+..|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEee
Confidence 99999999999999999764 799999999999999999999973 49999999999999 568889999
Q ss_pred ecccceecCCCCc---cccCCCCccccccccccccCC-------CchhHHHHHHHHHHHHhCCCCCC-C-----------
Q 011647 214 DFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRNYG-------AEADIWSAGVILYILLSGVPPFW-G----------- 271 (480)
Q Consensus 214 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-------~~~DiwslG~il~~lltg~~pf~-~----------- 271 (480)
|||+|..+.++.. ....+||.+|||||++.+..+ .+.||||+|.+|||+++...-+. +
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 9999998875432 234789999999999976432 25899999999999998643332 1
Q ss_pred -----CChHHHHHHHH--cCCCcCCCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHH
Q 011647 272 -----ETEQSIFDAIL--RGHIDFSSDPWPN-ISSSAKDIVKKMLHADPKERLSAAEV 321 (480)
Q Consensus 272 -----~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~~~ 321 (480)
.+-.++...+. +.++.++...... -..-+++.+..||..||+-|.|+.=+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 11122222222 2233333221111 23557899999999999999998654
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=264.67 Aligned_cols=248 Identities=23% Similarity=0.367 Sum_probs=189.9
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHH--ccCCCCeeEEEEEEEe
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVELKGAYED 139 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~~hp~iv~~~~~~~~ 139 (480)
...+...-.+.+.||+|-||.||+|.++ |..||||++.... -....||.+|.+. |+ |+||+.+++.-..
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLR-HENILgFIaaD~~ 276 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLR-HENILGFIAADNK 276 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhc-cchhhhhhhcccc
Confidence 4567778889999999999999999997 5789999986432 2556677777664 45 9999999987433
Q ss_pred C----CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeecCCCCcceecccCCCC
Q 011647 140 R----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------GVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 140 ~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~ 207 (480)
+ ..+++|++|.+.|||+|+|.+ ..++.+...+++.-++.||+|||.. .|.|||||..|||+ ..+
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn 352 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKN 352 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccC
Confidence 3 358999999999999999987 6899999999999999999999953 49999999999999 567
Q ss_pred CCeeEeecccceecCCCC-----ccccCCCCccccccccccccCC-------CchhHHHHHHHHHHHHhC----------
Q 011647 208 SPLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLRRNYG-------AEADIWSAGVILYILLSG---------- 265 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-------~~~DiwslG~il~~lltg---------- 265 (480)
+++.|+|+|+|....... ..+..+||.+|||||++..... ..+||||||.++||++..
T Consensus 353 ~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 889999999998765432 2355799999999999975432 358999999999999863
Q ss_pred CCCCCCCC-----hHHHHHHHHcCCCcCCC-CCCCCCC--HHHHHHHHHhcccCcCCCCCHHHHh
Q 011647 266 VPPFWGET-----EQSIFDAILRGHIDFSS-DPWPNIS--SSAKDIVKKMLHADPKERLSAAEVL 322 (480)
Q Consensus 266 ~~pf~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~li~~~L~~dp~~R~t~~~~l 322 (480)
.+||.+-. .+++.+-+.-....... ..|...+ ..+..+++.||..+|.-|.|+-.+.
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 57876522 23333333222222222 2233222 3467889999999999999986553
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=278.27 Aligned_cols=245 Identities=25% Similarity=0.388 Sum_probs=203.7
Q ss_pred eeecceecccCCeEEEEEEEcCCC----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
.+..+.||+|+||+||+|.+-..| -+||||++.... .......+.+|+-+|.++. |||++++++++.... +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HH
Confidence 344578999999999999986544 468999886433 3344578999999999998 999999999997655 78
Q ss_pred EEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||++|+++|+|.+++..+ ..+-......|..||++|+.|||++++|||||-..|||+. .-.++||.|||+++...+
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk---sP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK---SPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec---CCCeEEEEecchhhccCc
Confidence 999999999999999764 5688999999999999999999999999999999999995 466799999999998765
Q ss_pred CCc-cccCCC--Ccccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 224 GDV-FKDLVG--SAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 224 ~~~-~~~~~g--t~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
... .....| .+.|||-|.+. ..++.++|||||||++||++| |..|+.+....++-+.+..+.. ++.+ +..+-
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqP--piCti 927 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQP--PICTI 927 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCC--CCccH
Confidence 432 222222 45688888775 569999999999999999998 9999999998888877776654 3333 56788
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.-++.+||..|+..||++.++..
T Consensus 928 DVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 928 DVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHHHhccCcccCccHHHHHH
Confidence 9999999999999999999988754
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=249.26 Aligned_cols=256 Identities=24% Similarity=0.429 Sum_probs=198.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEE-EEEeCCe
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG-AYEDRHS 142 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~-~~~~~~~ 142 (480)
++.+.|.+.+.||+|.||.+.+|+++.++..+++|.+.... .....|.+|...--.|..|.||+.-|+ .|+..+.
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 45678999999999999999999999999999999886532 345778899887777788999998776 4788889
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++++||++-|+|.+-+.. ..+.|.....++.|++.||+|+|++++||||||.+||||-.. +...|||||||+++...
T Consensus 97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeecccccccC
Confidence 9999999999999887755 458899999999999999999999999999999999999753 34589999999987543
Q ss_pred CCCccccCCCCcccccccccc----c--cCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHH--HHHHHHcCCCcCCCCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLR----R--NYGAEADIWSAGVILYILLSGVPPFWGET--EQS--IFDAILRGHIDFSSDP 292 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~----~--~~~~~~DiwslG~il~~lltg~~pf~~~~--~~~--~~~~~~~~~~~~~~~~ 292 (480)
. .....--+..|.+||.+. + ...+.+|+|.||+++|.++||.+||.... +.. -+.+...+...-.+..
T Consensus 175 ~--tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~ 252 (378)
T KOG1345|consen 175 T--TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK 252 (378)
T ss_pred c--eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence 2 122222345699999763 2 25788999999999999999999997432 111 2222233333233334
Q ss_pred CCCCCHHHHHHHHHhcccCcCCC---CCHHHHhcCCcc
Q 011647 293 WPNISSSAKDIVKKMLHADPKER---LSAAEVLNHPWM 327 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R---~t~~~~l~h~~~ 327 (480)
+..+++.+..+.++-|.+++++| .++.+.....|.
T Consensus 253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 56789999999999999999999 344444444443
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=240.75 Aligned_cols=211 Identities=42% Similarity=0.732 Sum_probs=184.6
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCc
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 154 (480)
||+|++|.||++....+++.+++|++....... ..+.+.+|+..++.+. |++|+++++++......++++|++.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999986543211 3477999999999998 9999999999999999999999999899
Q ss_pred hHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-ccccCCC
Q 011647 155 LFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVG 232 (480)
Q Consensus 155 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~~~g 232 (480)
|.+++... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++.. ++.++|+|||.+....... ......+
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEccCCcchhhcccC
Confidence 99988765 578999999999999999999999999999999999999531 5779999999998764432 1334567
Q ss_pred Cccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 233 SAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 233 t~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
...|++||.+.. ..+.++|+|++|++++++ ..+.+++.+|+..
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~~ 200 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhhC
Confidence 889999998865 678899999999999999 5688999999999
Q ss_pred CcCCCCCHHHHhcCC
Q 011647 311 DPKERLSAAEVLNHP 325 (480)
Q Consensus 311 dp~~R~t~~~~l~h~ 325 (480)
+|++||++.++++|+
T Consensus 201 ~p~~R~~~~~l~~~~ 215 (215)
T cd00180 201 DPEKRPSAKEILEHL 215 (215)
T ss_pred CcccCcCHHHHhhCC
Confidence 999999999999885
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=238.81 Aligned_cols=211 Identities=42% Similarity=0.736 Sum_probs=180.4
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|.+.+.||.|++|+||++.+..+++.+|+|.+...... ...+.+.+|++.++++. |+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEe
Confidence 56788999999999999999988999999998754322 24578899999999997 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC--
Q 011647 149 LCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-- 225 (480)
++.+++|.+++..... +++..+..++.+++.+|.+||+.|++|+||+|.||+++ .++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEecCcccc
Confidence 9999999999987766 89999999999999999999999999999999999995 45779999999998775443
Q ss_pred ccccCCCCccccccccc-c-ccCCCchhHHHHHHHHHHHHhCCCCCCC-CC-hHHHHHHHHcCC
Q 011647 226 VFKDLVGSAYYVAPEVL-R-RNYGAEADIWSAGVILYILLSGVPPFWG-ET-EQSIFDAILRGH 285 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~lltg~~pf~~-~~-~~~~~~~~~~~~ 285 (480)
......++..|++||.+ . ..++.++|+|+||+++++|++|+.||.. .. ...+.+.+..+.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 33455788899999987 3 3467799999999999999999999977 33 345666665544
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-32 Score=293.01 Aligned_cols=197 Identities=19% Similarity=0.235 Sum_probs=146.8
Q ss_pred CCeeEEEEEE-------EeCCeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcce
Q 011647 128 RNIVELKGAY-------EDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (480)
Q Consensus 128 p~iv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Ni 199 (480)
+||+++++++ .....+++++|++ +++|.+++.. ...+++..+..+++||+.||.|||++||+||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 5677777766 2334577888987 6699999975 34599999999999999999999999999999999999
Q ss_pred ecccC----------------CCCCCeeEeecccceecCCCC-----------------ccccCCCCccccccccccc-c
Q 011647 200 LFSSS----------------AEDSPLKATDFGLSVFFKPGD-----------------VFKDLVGSAYYVAPEVLRR-N 245 (480)
Q Consensus 200 l~~~~----------------~~~~~ikl~Dfg~a~~~~~~~-----------------~~~~~~gt~~y~aPE~~~~-~ 245 (480)
||+.. +.++.+||+|||+++...... .....+||++|||||++.+ .
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 191 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS 191 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC
Confidence 99531 234568888888886432100 0112468999999998764 5
Q ss_pred CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCC
Q 011647 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (480)
Q Consensus 246 ~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~ 325 (480)
++.++|||||||+||||++|.+|+.... .....+..... +.. .....+...+++.+||+++|.+||++.++|+||
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhhch
Confidence 8999999999999999999988875322 12222222111 111 112245677899999999999999999999999
Q ss_pred ccccc
Q 011647 326 WMRVD 330 (480)
Q Consensus 326 ~~~~~ 330 (480)
||...
T Consensus 267 ~~~~~ 271 (793)
T PLN00181 267 FINEP 271 (793)
T ss_pred hhhhh
Confidence 99754
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=235.95 Aligned_cols=250 Identities=20% Similarity=0.259 Sum_probs=203.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE- 138 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~- 138 (480)
.+.+++....+-+|.||.||.|.+... .+.|-+|.++... +.-++..+..|-..+..+. |||+..+.++..
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie 358 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIE 358 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEee
Confidence 356788888899999999999977543 3456777765432 3445677888999998888 999999999874
Q ss_pred eCCeEEEEEecCCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCe
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAK--------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
+....++++.++.-|+|..++... +.++..+...++.|++.|++|||++||||.||-..|++| ++..++
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqV 435 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQV 435 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeE
Confidence 455678889999889999998721 347778888999999999999999999999999999999 567889
Q ss_pred eEeecccceecCCCCccc---cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCC
Q 011647 211 KATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~ 285 (480)
||+|=.+++..-+.+... ..-....||+||.+. ..|+.++|+||||++||||+| |+.||...++.++...++.+.
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy 515 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY 515 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc
Confidence 999999998776554321 122355799999886 469999999999999999998 999999999998887777664
Q ss_pred CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
. ... .-++|.++..++..||..+|++||+.+|+..
T Consensus 516 R-laQ--P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 R-LAQ--PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred e-ecC--CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 3 222 2378999999999999999999999998853
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=222.44 Aligned_cols=202 Identities=25% Similarity=0.415 Sum_probs=175.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.-.|+++++||+|+||+++.|.+.-++++||||.-... ....+++.|....+.|.+.++|..++-+..++.+-.+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 34699999999999999999999999999999976432 2346788899999999899999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC--CCCCCeeEeecccceecC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS--AEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~--~~~~~ikl~Dfg~a~~~~ 222 (480)
|+|++ |.+|+|+..-. ++|+.+++..++.|++.-++|+|++.+|.|||||+|+||... .+...|.|+|||+|+.+.
T Consensus 102 VidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred hhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 99999 88999988754 569999999999999999999999999999999999999742 245679999999999876
Q ss_pred CCC--------ccccCCCCccccccccc-cccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 011647 223 PGD--------VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGET 273 (480)
Q Consensus 223 ~~~--------~~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 273 (480)
... ...+..||.+||+-... ....+.+.|+-|||.++.+.|.|.+||.+..
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 443 23457899999998854 4458999999999999999999999998754
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=213.67 Aligned_cols=249 Identities=22% Similarity=0.293 Sum_probs=200.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.+.|+++++||+|+||.+|+|....+|..||||+-+.... ...+..|.++...|++...|+.+..++.+..+-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 355789999999999999999999999999999998754322 145778888998998889999999999999999
Q ss_pred EEEEecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.+||+++ |.+|+++.. ..+.++..++.-++-|++.-++|+|.+++|||||||+|+|+.-+.....+.|+|||+|+.+.
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 9999999 889998875 35679999999999999999999999999999999999999877777789999999999875
Q ss_pred CCC--------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcCCCcCCC
Q 011647 223 PGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSS 290 (480)
Q Consensus 223 ~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~~ 290 (480)
+.. ......||.+|.+-...-+ ..+.+.|+-|+|.+|.++..|..||.+... .+-.+.|.......+.
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 432 2234689999999876554 478899999999999999999999988654 3344445544433322
Q ss_pred -CCCCCCCHHHHHHHHHhcccCcCCCCCH
Q 011647 291 -DPWPNISSSAKDIVKKMLHADPKERLSA 318 (480)
Q Consensus 291 -~~~~~~~~~~~~li~~~L~~dp~~R~t~ 318 (480)
.....+|.++.-.+.-|=..--++-|..
T Consensus 246 e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 246 EVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 2235678888888887765555555543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=231.91 Aligned_cols=253 Identities=24% Similarity=0.308 Sum_probs=194.0
Q ss_pred ceeecceecccCCeEEEEEEEcCCC-ceEEEEEecccccCChhcHHHHHHHHHHHHHcc---CCCCeeEEEEEE-EeCCe
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLT---GHRNIVELKGAY-EDRHS 142 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---~hp~iv~~~~~~-~~~~~ 142 (480)
+|.+.+.||+|+||.||+|.+..++ ..+|+|.......... ..+..|+.++..+. +.+++..+++.+ ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999998774 6799998765322111 26778888888887 246899999999 57888
Q ss_pred EEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeecccc
Q 011647 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLS 218 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~a 218 (480)
.+|||+++ |.+|.++.... +.++..++..++.|++.+|++||+.|++||||||+|+++.... ....+.|.|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 88999987544 5799999999999999999999999999999999999997543 2257999999999
Q ss_pred eecC--CCC--------c-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC
Q 011647 219 VFFK--PGD--------V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 219 ~~~~--~~~--------~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~ 286 (480)
+... ... . .....||..|+++.+..+ ..+.+.|+||++.++.+++.|..||.+...............
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8321 111 1 123569999999998765 589999999999999999999999977654322222222111
Q ss_pred cCCCC-CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 287 DFSSD-PWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 287 ~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..... .....+.++..+...+-..+...+|....+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 11111 123345677777777777888888888777654
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=215.09 Aligned_cols=162 Identities=27% Similarity=0.349 Sum_probs=127.2
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCC
Q 011647 153 GELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231 (480)
Q Consensus 153 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~ 231 (480)
|+|.+++... +.+++..++.++.||+.||.|||+.+ ||+|||+ +.++.+|+ ||++...... ...
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~----~~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPE----QSR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccc----cCC
Confidence 6899988864 45999999999999999999999999 9999999 45667888 9999875432 236
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcCCC---CCCCCCCH--HHHHHH
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSS---DPWPNISS--SAKDIV 304 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~li 304 (480)
||+.|||||++.+ .++.++|||||||++|||++|..||..... ......+......... .....++. ++.++|
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 8999999999864 589999999999999999999999976543 2233333322221111 11112333 699999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccc
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.+||..+|.+||++.++++|+|+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999864
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-29 Score=258.77 Aligned_cols=256 Identities=28% Similarity=0.461 Sum_probs=196.8
Q ss_pred eecceecccCCeEEEEEEEcCCCceEEEEEeccc--ccCChhcH-HHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR--KLINRDDV-EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~-~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.....+|.|++|.|+.+........++.|.+... ........ ..+..|+-+-..+. |||++..+..+.+....+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhh
Confidence 4567899999999988888776666676655421 11111111 22566777777787 99998877766665555556
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
||||++ +|+.++...+.++...+..+++|++.||.|+|+.||.||||||+|+++. .++.+||+|||.+.......
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeeccCcc
Confidence 999999 9999999888999999999999999999999999999999999999994 56689999999988764322
Q ss_pred ----ccccCCCCcccccccccccc-C-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHcCC---CcCCCCCCC
Q 011647 226 ----VFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIF--DAILRGH---IDFSSDPWP 294 (480)
Q Consensus 226 ----~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~lltg~~pf~~~~~~~~~--~~~~~~~---~~~~~~~~~ 294 (480)
.....+|+..|+|||++.+. | ....||||.|+++..|.+|+.||......+.. ....... ..-+...+.
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS 555 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence 33567899999999998753 5 45689999999999999999999765433221 1111111 111222344
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.++...+.+|.+||++||.+|.|+++|++.+||+.-
T Consensus 556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 678899999999999999999999999999999853
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-26 Score=220.85 Aligned_cols=257 Identities=37% Similarity=0.581 Sum_probs=209.9
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCC-CeeEEEEEEEeCCeEEEEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR-NIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp-~iv~~~~~~~~~~~~~lv~ 147 (480)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+. |+ +|+++.+.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEEE
Confidence 778899999999999999998 779999987665444335678999999999999 56 8999999998888889999
Q ss_pred ecCCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC-CeeEeecccceecCC
Q 011647 148 DLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFKP 223 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~-~ikl~Dfg~a~~~~~ 223 (480)
+++.++++.+.+.... .++...+..++.|++.++.|+|+.|++|||+||+||++. ... .++++|||.+.....
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcceecCC
Confidence 9999999997776664 799999999999999999999999999999999999995 344 699999999986543
Q ss_pred CC-------ccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHcCCCc-
Q 011647 224 GD-------VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHID- 287 (480)
Q Consensus 224 ~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~~~~~~~- 287 (480)
.. ......||..|+|||.+.+ ..+...|+||+|++++++++|..||..... ......+......
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 32 2356789999999998864 578899999999999999999999877663 4455555444433
Q ss_pred CCCCCCCCC----CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 288 FSSDPWPNI----SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 288 ~~~~~~~~~----~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
......... ...+.+++.+++..+|..|.+..+...++|......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence 222221222 257899999999999999999999999977765433
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=227.44 Aligned_cols=167 Identities=19% Similarity=0.213 Sum_probs=129.9
Q ss_pred ccccccceeecceecccCCeEEEEEEEcC-CCceEEEEEeccccc--CChhcHHHHHHHHHHHHHccCCCCeeE-EEEEE
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVE-LKGAY 137 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~-~~~~~ 137 (480)
...+.+.|.+.+.||+|+||+||+|.++. +++.||||++..... ......+.+.+|+++|+++. |+|++. ++++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc-
Confidence 34455779999999999999999999876 677889998753211 12234567999999999998 999884 5442
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCC-CCcceecccCCCCCCeeEeecc
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL-KPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl-kp~Nil~~~~~~~~~ikl~Dfg 216 (480)
+..|+|||||+|++|.. +. ... ...++.|++.+|.|||++||+|||| ||+|||++ .++.+||+|||
T Consensus 91 ---~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFG 157 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQ 157 (365)
T ss_pred ---CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECc
Confidence 46799999999999963 21 111 1468899999999999999999999 99999994 45679999999
Q ss_pred cceecCCCC---------ccccCCCCcccccccccc
Q 011647 217 LSVFFKPGD---------VFKDLVGSAYYVAPEVLR 243 (480)
Q Consensus 217 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 243 (480)
+|+.+.... ......+++.|+|||.+.
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 999764322 113457889999999985
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-28 Score=241.11 Aligned_cols=240 Identities=28% Similarity=0.512 Sum_probs=206.9
Q ss_pred eecccCCeEEEEEEE---cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 74 ELGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
.+|.|+||.|++++- ...+..||+|+.++......... ....|..++..+..||.+|++...++.+...++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999997653 44578899999877655443333 66678888888888999999999999999999999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccC
Q 011647 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230 (480)
Q Consensus 151 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~ 230 (480)
.||+|...+.....+.+.....+...++-+++++|+.||+|||+|++||++ +.+|++++.|||+++..-.... .
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~---~ 153 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKI---A 153 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhh---c
Confidence 999999999888889999999999999999999999999999999999999 6788899999999987543332 2
Q ss_pred CCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 231 VGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 231 ~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
+||..|||||+++ ....++|.||+|+++++|+||..||.+ +....|.......+. .++..+++++..++..
T Consensus 154 cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFKR 224 (612)
T ss_pred ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHhh
Confidence 8999999999998 677889999999999999999999987 666777776665554 5788999999999999
Q ss_pred CcCCCCC-----HHHHhcCCcccc
Q 011647 311 DPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+|..|.. +.++++|+||..
T Consensus 225 ~p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 225 NPENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred CHHHHhccCcchhHHHhccchhee
Confidence 9999984 478999999974
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-25 Score=231.72 Aligned_cols=221 Identities=34% Similarity=0.616 Sum_probs=175.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|..++.|..|+||-||.++++.+.+++|+|+ .+..+. +++ ++... +.|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li-------lRn---ilt~a-~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI-------LRN---ILTFA-GNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccchh-------hhc---ccccc-CCccee---------------
Confidence 468889999999999999999999999999964 332211 111 22222 245444
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC--
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-- 224 (480)
|+=...++..+.++... +.+++|||+.||+|||+||+|.+|+ .-+++|+.|||+++..-..
T Consensus 136 ------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhcc
Confidence 34445555556666543 7889999999999999999999995 4677999999998753211
Q ss_pred ------C--------ccccCCCCccccccccc-cccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 225 ------D--------VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 225 ------~--------~~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
. .....+|||.|+|||++ +.+|+..+|+|++|+|+|+.+-|..||.+.++++++..+....+.++
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp 278 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 278 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence 0 11346899999999986 56799999999999999999999999999999999999999888888
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHhcCCcccccCC
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRVDGD 332 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~h~~~~~~~~ 332 (480)
.. -..++++++++|.++|..+|..|. .+-++.+|+||+.-..
T Consensus 279 E~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 279 EE-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred cc-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 77 457899999999999999999997 6777889999986533
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=192.97 Aligned_cols=142 Identities=20% Similarity=0.213 Sum_probs=110.9
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhc-----------------------HHHHHHHHHHHHHccCCC
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD-----------------------VEDVRREVQIMHHLTGHR 128 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----------------------~~~~~~e~~~l~~l~~hp 128 (480)
...||+|+||.||+|.+. +|+.||||+++......... .....+|++++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 468999999999999997 89999999997542211110 122345999999997 77
Q ss_pred CeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHcCCeecCCCCcceecccCCCC
Q 011647 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC-HSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 129 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
++......... ..+|||||++|+++.......+.+++..+..++.|++.+|.++ |+.||+||||||+|||++ +
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~ 153 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----D 153 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----C
Confidence 76443332222 2389999999887766555567899999999999999999999 799999999999999995 3
Q ss_pred CCeeEeecccceec
Q 011647 208 SPLKATDFGLSVFF 221 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~ 221 (480)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 56999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=196.00 Aligned_cols=175 Identities=15% Similarity=0.174 Sum_probs=134.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHH------HHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
+.++|++.+.||.|+||.||++.. ++..+|||++...........+. +.+|+..+.++. ||+|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeee
Confidence 568899999999999999999655 36689999997654434333334 689999999998 999999998865
Q ss_pred eC--------CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCe
Q 011647 139 DR--------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 139 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
.. +..++||||++|.+|.+.. .+++ ....+++.+|..||+.|++|||+||+||+++ .++ +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~~g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---KNG-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---CCC-E
Confidence 43 3578999999999997763 2333 3466999999999999999999999999995 344 9
Q ss_pred eEeecccceecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHh
Q 011647 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLS 264 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~llt 264 (480)
+|+|||............. =++...++.++|+||||+++..+..
T Consensus 174 ~liDfg~~~~~~e~~a~d~----------~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKDR----------IDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEECCCcccccchhhHHH----------HHHHhHhcccccccceeEeehHHHH
Confidence 9999998875432211111 0223456789999999998876553
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=200.89 Aligned_cols=234 Identities=25% Similarity=0.394 Sum_probs=153.3
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC---------CCCeeEEEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG---------HRNIVELKGAYE 138 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---------hp~iv~~~~~~~ 138 (480)
....++.||.|+++.||.+.+..+++.+|+|+............+.+++|.-....+.+ |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 46678899999999999999999999999999875554444567778777654444331 222333333221
Q ss_pred ---------eC---C-----eEEEEEecCCCCchHHHHH---hcCCC----CHHHHHHHHHHHHHHHHHHHHcCCeecCC
Q 011647 139 ---------DR---H-----SVNLIMDLCAGGELFDRII---AKGHY----SERAAANLCRQMVTVVHYCHSMGVMHRDL 194 (480)
Q Consensus 139 ---------~~---~-----~~~lv~e~~~~~~L~~~l~---~~~~~----~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl 194 (480)
.. . +.+++|+-+ .++|.+.+. ..... .......+..|++..+++||+.|+||+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 235778877 558877653 22222 22333456689999999999999999999
Q ss_pred CCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccccccccccc---------cCCCchhHHHHHHHHHHHHhC
Q 011647 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR---------NYGAEADIWSAGVILYILLSG 265 (480)
Q Consensus 195 kp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwslG~il~~lltg 265 (480)
+|+|+++ +.+|.++|+||+....... .......+..|.|||.... .++.+.|.|+||+++|.|.+|
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~--~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGT--RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTE--EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCc--eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 9999999 5678899999998876432 2222345678999997632 267789999999999999999
Q ss_pred CCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCC
Q 011647 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315 (480)
Q Consensus 266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 315 (480)
+.||........... .+. ....+|+.++.||..+|+.||++|
T Consensus 247 ~lPf~~~~~~~~~~~------~f~--~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW------DFS--RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG------GGT--TSS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc------cch--hcCCcCHHHHHHHHHHccCCcccC
Confidence 999976544322111 111 123688999999999999999988
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=185.72 Aligned_cols=189 Identities=22% Similarity=0.264 Sum_probs=141.4
Q ss_pred eecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh-hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
.+...|++|+||+||.+.. .+..++.+.+........ -....+.+|+++|++|.+|+++++++++ +..+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3457899999999997766 467788776654332111 1123588999999999878999999986 34699999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCC-CCcceecccCCCCCCeeEeecccceecCCCCcc
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL-KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl-kp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~ 227 (480)
|+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++ .++.++|+|||++.........
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcchH
Confidence 9999988654321 1 2357889999999999999999999 79999994 4567999999999865433211
Q ss_pred ----c----------cCCCCcccccccccc---ccCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 011647 228 ----K----------DLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGETE 274 (480)
Q Consensus 228 ----~----------~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 274 (480)
. -...++.|++|+..+ ..--...+.++.|+-+|.++|+..|+++..+
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 123577888888532 2223567999999999999999999876543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-23 Score=184.74 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=113.1
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccCChh-----------------------cHHHHHHHHHHHHHccCCC
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----------------------DVEDVRREVQIMHHLTGHR 128 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~~hp 128 (480)
.+.||+|+||+||+|.+. +|+.||||++......... ....+.+|...+.++. |+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 578999999999999987 8999999998764211000 0123468899999998 88
Q ss_pred CeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCC
Q 011647 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 129 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
++.....+.... .++||||++|+++.........++...+..++.|++.+|.++|+ .||+||||||+||+++ +
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~----~ 153 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH----D 153 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----C
Confidence 875444433322 48999999988665544455678899999999999999999999 9999999999999995 4
Q ss_pred CCeeEeecccceecC
Q 011647 208 SPLKATDFGLSVFFK 222 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~ 222 (480)
+.++|+|||++....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 679999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=196.20 Aligned_cols=191 Identities=27% Similarity=0.395 Sum_probs=140.7
Q ss_pred cCCCCeeEEEEEEEe---------------------------CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHH
Q 011647 125 TGHRNIVELKGAYED---------------------------RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177 (480)
Q Consensus 125 ~~hp~iv~~~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi 177 (480)
..|||||++..+|.+ +..+|+||..+. .+|..++..+ ..+.....-++.|+
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-HRSYRTGRVILAQL 350 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-CCchHHHHHHHHHH
Confidence 359999999987633 235789998884 5898888654 46667778899999
Q ss_pred HHHHHHHHHcCCeecCCCCcceecccCCC-CCCeeEeecccceecCC-------CCccccCCCCccccccccccccC---
Q 011647 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVFFKP-------GDVFKDLVGSAYYVAPEVLRRNY--- 246 (480)
Q Consensus 178 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~~~ikl~Dfg~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~--- 246 (480)
++|+.|||.+||.|||+|.+|||+.-+++ -..+.|+|||.+-.-.. .......-|...-||||+...-.
T Consensus 351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~ 430 (598)
T KOG4158|consen 351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN 430 (598)
T ss_pred HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence 99999999999999999999999976433 34678999998764221 11122345788899999986422
Q ss_pred ----CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 011647 247 ----GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319 (480)
Q Consensus 247 ----~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 319 (480)
-.++|.|+.|.+.||+++...||++..+...-..-.+ .-..| .....+++.+++++..+|+.||++|++..
T Consensus 431 avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-e~qLP-alp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 431 AVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-ESQLP-ALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred eeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-hhhCC-CCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 2479999999999999999999987443211111101 11111 12246899999999999999999999754
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-23 Score=217.08 Aligned_cols=235 Identities=21% Similarity=0.318 Sum_probs=177.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccc-cCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK-LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.|...+.||++-|=+|.+|++.. | .|+||++-+.. ...-....+-..|++ .... .+||.+.+.-+.+.+...|+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence 57888999999999999999875 4 49999986543 333333444445555 3333 499999988887788888999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC--CC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--PG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~--~~ 224 (480)
-+|... +|+|++....-+..-+.+.|+.|++.||.-+|..||+|||||.+||||+ .-+-+.|+||-.-+... .+
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCC
Confidence 999954 9999998777788888999999999999999999999999999999995 46679999998765421 11
Q ss_pred C--c----cccCCCCccccccccccc-----------c-CCCchhHHHHHHHHHHHHh-CCCCCCC-----------CCh
Q 011647 225 D--V----FKDLVGSAYYVAPEVLRR-----------N-YGAEADIWSAGVILYILLS-GVPPFWG-----------ETE 274 (480)
Q Consensus 225 ~--~----~~~~~gt~~y~aPE~~~~-----------~-~~~~~DiwslG~il~~llt-g~~pf~~-----------~~~ 274 (480)
. . +.+...-.+|+|||.+.. . .+++.||||+||+++||++ |++||.- ...
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDP 255 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCH
Confidence 1 1 122233457999997631 1 4578999999999999987 7888831 111
Q ss_pred HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+..++.|. +..++.+|..|++.||++|.++++.|+-
T Consensus 256 e~~Le~Ie--------------d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 256 EQLLEKIE--------------DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHhCc--------------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 11221111 2368999999999999999999999975
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-22 Score=177.12 Aligned_cols=138 Identities=22% Similarity=0.274 Sum_probs=108.7
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc----CCCCeeEEEEEEEeCC---eEE
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT----GHRNIVELKGAYEDRH---SVN 144 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~----~hp~iv~~~~~~~~~~---~~~ 144 (480)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+. .||||++++++++++. .++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 47899999999995 6666555 6998865322 23467999999999994 3899999999998873 434
Q ss_pred -EEEec--CCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHcCCeecCCCCcceecccCC-CCCCeeEeecccc
Q 011647 145 -LIMDL--CAGGELFDRIIAKGHYSERAAANLCRQMVTVV-HYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLS 218 (480)
Q Consensus 145 -lv~e~--~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg~a 218 (480)
+|+|| +.+++|.+++.+ +.+++. ..++.|++.++ +|||+++|+||||||+|||++..+ .+..++|+||+.+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 78999 557999999966 456666 36688888887 999999999999999999997543 3457999995444
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-22 Score=209.14 Aligned_cols=197 Identities=22% Similarity=0.330 Sum_probs=160.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.|.+.||+|+||+||+|.+.. |+.||+|+-++.....---..+++.-++ +. --+.|..+..++...+..++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~---~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-PQ---MLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-hh---hhcchHHHHHHHccCCccee
Confidence 4578899999999999999999987 9999999876543322111223332222 11 13566677777777788899
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceeccc----CCCCCCeeEeecccceec
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS----SAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~----~~~~~~ikl~Dfg~a~~~ 221 (480)
|+||.+.|+|.+++...+.+++..+..+..||+..+++||..+|||+||||+|+||.. +.+...++|+|||-+..+
T Consensus 772 v~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred eeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999999999998888999999999999999999999999999999999999963 234567999999998754
Q ss_pred ---CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCC
Q 011647 222 ---KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVP 267 (480)
Q Consensus 222 ---~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~ 267 (480)
.++..+...++|-.+-.+|+..| .|++.+|.|.|+.+++-||.|++
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 45556777889999999999876 59999999999999999999864
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-21 Score=189.72 Aligned_cols=244 Identities=24% Similarity=0.383 Sum_probs=162.7
Q ss_pred eeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEE------EEE--
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK------GAY-- 137 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~------~~~-- 137 (480)
+.+.+..+.++++.+...+-... ...++-+..... +........+++-.+.....|++.+..- ..+
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d---~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~ 322 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVD---SLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKR 322 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhcc---chhhhhhhhhhhhheeccccCCcccccCCCCchhhhccc
Confidence 44455556666666655443322 222332322111 1123344555555555555344433221 011
Q ss_pred ---EeCCeEEEEEecCCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 138 ---EDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 138 ---~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
....++||.|++|...+|.+++.... ..+......++.|++.|++| +|.+|||+||.||++. .+..+|
T Consensus 323 ~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~k 396 (516)
T KOG1033|consen 323 NKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLK 396 (516)
T ss_pred cccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhh
Confidence 12346889999999999999997543 36778889999999999999 9999999999999994 455799
Q ss_pred EeecccceecCCCC-------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH
Q 011647 212 ATDFGLSVFFKPGD-------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAIL 282 (480)
Q Consensus 212 l~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~ 282 (480)
|.|||+........ ..+..+||.+||+||++.+ .|+.++||||||++|+||+. +|..... ...+..+.
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r 473 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLTDIR 473 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhh
Confidence 99999988765444 4566789999999999985 59999999999999999997 2322221 12222333
Q ss_pred cCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
.+.++ ...+... ++-..|+.+||.+.|.+||++.+.--|+|.
T Consensus 474 ~g~ip--~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 474 DGIIP--PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred cCCCC--hHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 33332 1112222 345689999999999999988887777775
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-21 Score=172.73 Aligned_cols=238 Identities=18% Similarity=0.239 Sum_probs=183.2
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
..+..+|.+.-.|..|+|++..+ .+++|++..+.. .......|..|.-.|+-+. ||||+.+++.|....++.++..
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~-t~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN--DIVAKILNVREV-TARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCcccccccccCc--chhhhhhhhhhc-chhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 45667889999999999999754 577888765443 2223355777888887777 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeE--eecccceecC
Q 011647 149 LCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFK 222 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl--~Dfg~a~~~~ 222 (480)
||+.|+|+..+..... ++..++.+++.+|++|+.|||+.. |.---|....++| +++.+.+| +|--++...
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarismad~kfsfqe- 343 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISMADTKFSFQE- 343 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheecccceeeeec-
Confidence 9999999999986543 678889999999999999999975 4455688889999 44544444 443333221
Q ss_pred CCCccccCCCCcccccccccccc----CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
....=.|.||+||.+... --.++|+|||.+++|||.|...||..-.+.+.-.++.-...... ..|.++.
T Consensus 344 -----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~--ippgis~ 416 (448)
T KOG0195|consen 344 -----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVH--IPPGISR 416 (448)
T ss_pred -----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccccc--CCCCccH
Confidence 112346789999998653 23578999999999999999999988877665555544333322 2368999
Q ss_pred HHHHHHHHhcccCcCCCCCHHHH
Q 011647 299 SAKDIVKKMLHADPKERLSAAEV 321 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~ 321 (480)
.+..|+.-|+..||.+||....+
T Consensus 417 hm~klm~icmnedpgkrpkfdmi 439 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMI 439 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCccee
Confidence 99999999999999999987665
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=174.35 Aligned_cols=145 Identities=17% Similarity=0.137 Sum_probs=114.5
Q ss_pred ceeecceecccCCeEEEEEE-EcCCCceEEEEEecccccCC-------------------hh--cHHHHHHHHHHHHHcc
Q 011647 68 TYIFGRELGRGQFGVTYLVT-HKDTKQQFACKSISSRKLIN-------------------RD--DVEDVRREVQIMHHLT 125 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~-------------------~~--~~~~~~~e~~~l~~l~ 125 (480)
.|.+.+.||+|+||.||+|. +..+|+.||||++....... .. ....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999 66789999999987532110 00 1134678999999997
Q ss_pred CCC--CeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC-CeecCCCCcceecc
Q 011647 126 GHR--NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG-VMHRDLKPENFLFS 202 (480)
Q Consensus 126 ~hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~ 202 (480)
+. .+++++++ ...++||||+.|.+|.........+....+..++.||+.+|.+||+.| |+||||||+||+++
T Consensus 109 -~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 -EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred -hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 43 34555543 235899999999888766545556777778899999999999999999 99999999999995
Q ss_pred cCCCCCCeeEeecccceec
Q 011647 203 SSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 203 ~~~~~~~ikl~Dfg~a~~~ 221 (480)
++.++|+|||.+...
T Consensus 184 ----~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 ----DGKVVIIDVSQSVEL 198 (237)
T ss_pred ----CCCEEEEEChhhhcc
Confidence 567999999998754
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6e-22 Score=204.55 Aligned_cols=258 Identities=30% Similarity=0.497 Sum_probs=209.6
Q ss_pred ceeecceecccCCeEEEEEEEcC-CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.|.+.+.||+|+|+.|-.+.... ....+|+|.+.... ......+....|..+-..+.+|+|++.+++........+++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 47777889999999999887744 34557777765433 23344566777888888888899999999999999999999
Q ss_pred EecCCCCchHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCCcceecccCCCCC-CeeEeecccceecC
Q 011647 147 MDLCAGGELFDRI-IAKG-HYSERAAANLCRQMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFK 222 (480)
Q Consensus 147 ~e~~~~~~L~~~l-~~~~-~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~-~ikl~Dfg~a~~~~ 222 (480)
++|..|+++++.+ .... ..+...+..++.|+..++.|+| +.++.||||||+|.+++. .+ .++++|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~---s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE---SGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---CCCcccCCCchhhcccc
Confidence 9999999999988 5554 6788889999999999999999 999999999999999954 44 79999999998765
Q ss_pred C-C---CccccCCC-Cccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHcCCCcCCCCCCC
Q 011647 223 P-G---DVFKDLVG-SAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIF-DAILRGHIDFSSDPWP 294 (480)
Q Consensus 223 ~-~---~~~~~~~g-t~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~ 294 (480)
. . ......+| ++.|+|||...+ ..++..|+||.|+++..+++|..||......... .........+...+|.
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWN 256 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccc
Confidence 4 2 23345678 999999998865 4688899999999999999999999765543311 1122222333456788
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.++....+++.++|..+|..|.+.+++..+||+..
T Consensus 257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 257 SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cCChhhhhcccccccCCchhccccccccccccccc
Confidence 89999999999999999999999999999999987
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=162.10 Aligned_cols=137 Identities=25% Similarity=0.348 Sum_probs=112.7
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChh-----cHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
+.||+|++|.||+|.+ .+..+++|........... ....+.+|+.++..+. |++|+....++......++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999987 5677999986543322111 1245788999999998 888877776776778889999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
||++|++|.+.+..... ....++.+++.+|.++|+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 99999999988865422 7789999999999999999999999999999995 56699999999875
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-18 Score=175.99 Aligned_cols=141 Identities=21% Similarity=0.265 Sum_probs=112.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-----ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...|...+.||+|+||+||++.+... .+++|........ .....+++.+|++++..+. |++++....++...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~ 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDP 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeC
Confidence 34567789999999999999987543 3455443221111 1122356889999999998 99998887777777
Q ss_pred CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
...++||||++|++|.+++. ....++.+++.+|.+||+.|++||||||+|||+. ++.++|+|||+++.
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDFGla~~ 476 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDFGLGKY 476 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeCccccc
Confidence 77899999999999988775 3567899999999999999999999999999992 45699999999875
Q ss_pred c
Q 011647 221 F 221 (480)
Q Consensus 221 ~ 221 (480)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.9e-19 Score=158.45 Aligned_cols=134 Identities=21% Similarity=0.280 Sum_probs=105.5
Q ss_pred eecccCCeEEEEEEEcCCCceEEEEEecccccCCh-----hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
.||+|+||+||+|.. ++..+++|.......... ....++.+|++++..+. |+++.....++......++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 489999999999985 467899998654322111 12366789999999998 7765544444455667789999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
|++|++|.+.+..... .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence 9999999887754321 7899999999999999999999999999995 567999999998753
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=9e-19 Score=158.14 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=107.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh-------------------hcHHHHHHHHHHHHHccCCC
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-------------------DDVEDVRREVQIMHHLTGHR 128 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~~hp 128 (480)
.|.+.+.||+|+||.||++... +|+.||||++........ .......+|+.++..+. |+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 93 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EE 93 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-Hc
Confidence 4888899999999999999875 689999998764321000 01123678899999887 66
Q ss_pred --CeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC
Q 011647 129 --NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (480)
Q Consensus 129 --~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 206 (480)
.++..++. ...++||||++|++|..... ......++.+++.++.++|+.||+||||||+||+++ +
T Consensus 94 ~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~ 160 (198)
T cd05144 94 GFPVPKPIDW----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---D 160 (198)
T ss_pred CCCCCceeec----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---C
Confidence 44555442 44589999999998866432 134567899999999999999999999999999994 4
Q ss_pred CCCeeEeecccceecC
Q 011647 207 DSPLKATDFGLSVFFK 222 (480)
Q Consensus 207 ~~~ikl~Dfg~a~~~~ 222 (480)
++.++|+|||.+....
T Consensus 161 ~~~~~liDfg~~~~~~ 176 (198)
T cd05144 161 DEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcEEEEECCccccCC
Confidence 6789999999997544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=172.13 Aligned_cols=198 Identities=24% Similarity=0.354 Sum_probs=155.3
Q ss_pred HHccCCCCeeEEEEEEEeCCeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCC-eecCCCCcce
Q 011647 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV-MHRDLKPENF 199 (480)
Q Consensus 122 ~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dlkp~Ni 199 (480)
+.+. |.|+.++++.+.++...++|.+||..|+|.+.+.. .-.+++.....++++|+.||.|||+.-| .|+.|+..|+
T Consensus 2 ~~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred cccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 4566 99999999999999999999999999999999987 4568899999999999999999998765 9999999999
Q ss_pred ecccCCCCCCeeEeecccceecCCC---CccccCCCCcccccccccccc--------CCCchhHHHHHHHHHHHHhCCCC
Q 011647 200 LFSSSAEDSPLKATDFGLSVFFKPG---DVFKDLVGSAYYVAPEVLRRN--------YGAEADIWSAGVILYILLSGVPP 268 (480)
Q Consensus 200 l~~~~~~~~~ikl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~DiwslG~il~~lltg~~p 268 (480)
++ +....+||+|||+....... .......-...|.|||.+++. .+.+.||||+|++++|+++...|
T Consensus 81 lv---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 81 LV---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ee---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99 56778999999998765321 111111223459999998652 46679999999999999999999
Q ss_pred CCCCC----hHHHHHHHHc-CCCcCCCCCC--CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 269 FWGET----EQSIFDAILR-GHIDFSSDPW--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 269 f~~~~----~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
|.... ..++...+.. +...+.+..+ ..+++++..++..|+..+|++||+++++-.
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 96522 2345555555 2222222111 145668999999999999999999999864
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-18 Score=142.86 Aligned_cols=115 Identities=37% Similarity=0.452 Sum_probs=106.5
Q ss_pred HHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-c
Q 011647 362 VIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-R 440 (480)
Q Consensus 362 ~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~ 440 (480)
....+++.+++++|+++|..||++++|.|++.||..+|+.+|..+++.++..|+..+|. +.|.|+|.+|+.++.... .
T Consensus 9 ~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 9 LTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred hhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc
Confidence 34467999999999999999999999999999999999999999999999999999999 899999999999987644 5
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
....+++..||+.||+|+||+|+.+|++.+...+++-
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~ 124 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGER 124 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhccc
Confidence 6778999999999999999999999999999988763
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-18 Score=151.69 Aligned_cols=142 Identities=16% Similarity=0.199 Sum_probs=100.5
Q ss_pred ecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHH---------------------HHHHHHHHHHHccCC-C
Q 011647 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE---------------------DVRREVQIMHHLTGH-R 128 (480)
Q Consensus 71 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~e~~~l~~l~~h-p 128 (480)
+++.||+|+||+||+|.+. +++.||||++............ ....|...+.++..+ .
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999987 7899999998653221111111 124566677666522 2
Q ss_pred CeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCC
Q 011647 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 129 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
.++++++. ...++||||++|+.+........... ..+..++.+++.++.++|. .||+||||||+||+++ +
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~ 150 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----D 150 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----C
Confidence 34555543 23589999999854422111111111 6678999999999999999 9999999999999995 6
Q ss_pred CCeeEeecccceecC
Q 011647 208 SPLKATDFGLSVFFK 222 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~ 222 (480)
+.++|+|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 679999999997644
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.8e-18 Score=168.61 Aligned_cols=258 Identities=23% Similarity=0.283 Sum_probs=200.3
Q ss_pred cccceeecceecc--cCCeEEEEEEE--cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 65 VRNTYIFGRELGR--GQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~--G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
....+.+...+|. |.+|.||.+.. ..++..+|+|.-+.. .........=.+|+...+++..|+|.++.+..++..
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCcccccC
Confidence 4456778899999 99999999998 888899999974321 111222233456777778888899999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVT----VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~----~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
+..++-+|+| +.+|..+...... ++...++.++.+... ||.++|+.+++|-|+||.||++..+ ....+++||
T Consensus 191 ~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~--~~s~~~~df 267 (524)
T KOG0601|consen 191 GILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSD--WTSCKLTDF 267 (524)
T ss_pred Ccceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccc--cceeecCCc
Confidence 9999999999 5688777766544 899999999999999 9999999999999999999999532 277999999
Q ss_pred ccceecCCCCcc------ccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 216 GLSVFFKPGDVF------KDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 216 g~a~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
|+...+..+... ....|...|++||.+++-++...|+|++|.++.+..++..++...... .+..+.... .+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W~~~r~~~--ip 344 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS-SWSQLRQGY--IP 344 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC-Ccccccccc--Cc
Confidence 999887655421 122577889999999999999999999999999988887665433110 011111111 22
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.......+.++...+..|+..+|..|++++.+++|++...
T Consensus 345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 2223355677788999999999999999999999999873
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-17 Score=150.20 Aligned_cols=138 Identities=18% Similarity=0.257 Sum_probs=104.2
Q ss_pred ceec-ccCCeEEEEEEEcCCCceEEEEEeccccc----------CChhcHHHHHHHHHHHHHccCCCCe--eEEEEEEEe
Q 011647 73 RELG-RGQFGVTYLVTHKDTKQQFACKSISSRKL----------INRDDVEDVRREVQIMHHLTGHRNI--VELKGAYED 139 (480)
Q Consensus 73 ~~lG-~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~~hp~i--v~~~~~~~~ 139 (480)
..|| .||.|+||.+... +..++||.+..... .+.....++.+|+.++.++. |++| ++.+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence 4677 8889999998775 67899998853221 11223467889999999998 7774 677776433
Q ss_pred C-Ce---EEEEEecCCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 140 R-HS---VNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 140 ~-~~---~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
. .. .++|||+++| .+|.+++.. ..+++.. +.+|+.+|.+||++||+||||||+|||++. ++.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~---~~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDP---DGKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcC---CCCEEEEE
Confidence 2 22 3599999997 688877654 4566543 578999999999999999999999999953 45799999
Q ss_pred cccceec
Q 011647 215 FGLSVFF 221 (480)
Q Consensus 215 fg~a~~~ 221 (480)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9998763
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-17 Score=140.72 Aligned_cols=111 Identities=39% Similarity=0.545 Sum_probs=100.5
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc-c---
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV-E--- 442 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~-~--- 442 (480)
++.++...++++|+.||.+++|+|+..||..+++.+|..++..++..++..+|.|++|.|+|+||+.++...... .
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 356778889999999999999999999999999999999999999999999999999999999999998754322 1
Q ss_pred -cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 443 -REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 443 -~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
..++++.+|+.||+|++|+||.+|++.++..+++.
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~ 117 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK 117 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc
Confidence 35699999999999999999999999999988763
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.5e-18 Score=174.17 Aligned_cols=260 Identities=28% Similarity=0.419 Sum_probs=207.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
.+.+.+.+-+|+++.++.+.-..+|...++|+..........+.+..+.+-.++.... +|.+++....+......++|+
T Consensus 805 ~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~-~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 805 GFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPR-SPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred cceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCC-CCceecccCCCCCCCCcchhh
Confidence 3556667888888888888877777667777665544444444555555555544344 677776665556677889999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC----
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP---- 223 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~---- 223 (480)
+|+.+++|...+...+..+.+.++..+..+..++++||+..++|||++|.|+++ ...++.++.|||.......
T Consensus 884 ~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred HHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccccccccCc
Confidence 999999999999988888888999999999999999999999999999999999 5678899999984332100
Q ss_pred -----------------C-----------CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 011647 224 -----------------G-----------DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE 274 (480)
Q Consensus 224 -----------------~-----------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~ 274 (480)
. .......||+.|.+||.+.+ ..+..+|.|++|+++++.++|.+||.....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 0 00123579999999998765 578899999999999999999999999999
Q ss_pred HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHH---HHhcCCcccccCC
Q 011647 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA---EVLNHPWMRVDGD 332 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~---~~l~h~~~~~~~~ 332 (480)
+..++.+.++..+++..+ ...+.++++++.++|..+|.+|..+. ++-.|+||+-...
T Consensus 1041 q~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1041 QQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred hhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCc
Confidence 999999999888776654 35789999999999999999999888 8889999986443
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.2e-17 Score=138.77 Aligned_cols=133 Identities=24% Similarity=0.311 Sum_probs=111.2
Q ss_pred ecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCC-CCeeEEEEEEEeCCeEEEEEec
Q 011647 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDL 149 (480)
Q Consensus 71 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~~~~~~~~~~~~~lv~e~ 149 (480)
+.+.||+|+++.||++.... ..+++|....... ...+.+|+.++..+..+ +++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999854 6799998754321 35788999999999844 6899999998888889999999
Q ss_pred CCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM---GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 150 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+.|+.+... +......++.+++.+|.++|.. +++|+|++|+||+++. .+.++++|||.+..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEEEecccccC
Confidence 998877543 5566778899999999999984 7999999999999953 56799999999864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-15 Score=123.62 Aligned_cols=112 Identities=29% Similarity=0.455 Sum_probs=104.5
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc-ccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM-HMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~-~~~~~~~ 443 (480)
..+++++.+.++..|..||.+++|+|+.+||+.+++.+|..+..+++..++..+|.++.|.|+|++|+..+. .+...++
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt 104 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT 104 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc
Confidence 457788889999999999999999999999999999999999999999999999999999999999999865 3555679
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+++..+|+.+|.|++|.|+..+++.++++|++
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLge 137 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGE 137 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCc
Confidence 999999999999999999999999999999986
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-14 Score=148.06 Aligned_cols=157 Identities=21% Similarity=0.317 Sum_probs=100.2
Q ss_pred cCCcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--------------------------C-h--
Q 011647 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--------------------------N-R-- 108 (480)
Q Consensus 58 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~-~-- 108 (480)
.|.+.+.+-..|.. +.||+|++|+||+|+.+.+|+.||||+.++.... + .
T Consensus 111 lG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~ 189 (537)
T PRK04750 111 LGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREV 189 (537)
T ss_pred hCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHH
Confidence 34445555556776 7899999999999999988999999999754200 0 0
Q ss_pred --hcHHH------HHHHHHHHHHcc---CCCCeeEEEEEE-EeCCeEEEEEecCCCCchHHH--HHhcC----CCCHHHH
Q 011647 109 --DDVED------VRREVQIMHHLT---GHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDR--IIAKG----HYSERAA 170 (480)
Q Consensus 109 --~~~~~------~~~e~~~l~~l~---~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~--l~~~~----~~~~~~~ 170 (480)
+..+. +.+|+..+.++. .+.+.+.+-.++ +..+..++||||+.|+.+.+. +...+ .+.+..+
T Consensus 190 v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v 269 (537)
T PRK04750 190 VAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGV 269 (537)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHH
Confidence 01112 334444444443 122223332322 224567899999999999764 33333 2333444
Q ss_pred HHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-CCCCeeEeecccceecC
Q 011647 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFFK 222 (480)
Q Consensus 171 ~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg~a~~~~ 222 (480)
..++.|+ +..|++|+|+||.||+++.++ ..+.++++|||++..+.
T Consensus 270 ~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 270 EVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 4444444 468999999999999996432 22489999999987654
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-14 Score=115.22 Aligned_cols=109 Identities=28% Similarity=0.419 Sum_probs=98.9
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~ 442 (480)
...|++.++++++++|..+|.|+||.|++++|+..+..+|...++++++.|+... .|.|+|--|+.+... +...+
T Consensus 23 Famf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtd 98 (171)
T KOG0031|consen 23 FAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTD 98 (171)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCC
Confidence 3568899999999999999999999999999999999999999999999999765 789999999999865 44467
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+++.|..||+.||.+++|.|..+.+++++-..++
T Consensus 99 pe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gD 132 (171)
T KOG0031|consen 99 PEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGD 132 (171)
T ss_pred HHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcc
Confidence 8899999999999999999999999999877664
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=122.49 Aligned_cols=143 Identities=14% Similarity=0.148 Sum_probs=104.6
Q ss_pred cceecccCCeEEEEEEEcC------CCceEEEEEeccccc--------C-----------ChhcHHHH----HHHHHHHH
Q 011647 72 GRELGRGQFGVTYLVTHKD------TKQQFACKSISSRKL--------I-----------NRDDVEDV----RREVQIMH 122 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~------~~~~vavK~~~~~~~--------~-----------~~~~~~~~----~~e~~~l~ 122 (480)
...||.|--+.||.|.... .+..+|||+++.... . .......+ ++|+..|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998653 357899999853210 0 01112333 38999999
Q ss_pred HccCC-CCeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHcCCeecCCCCccee
Q 011647 123 HLTGH-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC-HSMGVMHRDLKPENFL 200 (480)
Q Consensus 123 ~l~~h-p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~ivH~Dlkp~Nil 200 (480)
++... -++++++++ ...+|||||+.+..+.....+...+++..+..+..+++.+|..| |+.||||+||++.|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 98732 467777765 45689999997654433222333466667788899999999998 8999999999999999
Q ss_pred cccCCCCCCeeEeecccceecC
Q 011647 201 FSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 201 ~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+. ++.+.|+|||.+....
T Consensus 158 ~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 158 WH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EE----CCcEEEEECCCceeCC
Confidence 94 3569999999988654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.2e-14 Score=140.88 Aligned_cols=143 Identities=18% Similarity=0.217 Sum_probs=95.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCC--------------------------h-hcH----H------HHH
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--------------------------R-DDV----E------DVR 115 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------~-~~~----~------~~~ 115 (480)
+.||+|++|.||+|+.+ +|+.||||+..+..... . ... . .+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 67999999999999976 58999999986531000 0 000 0 134
Q ss_pred HHHHHHHHcc----CCCCeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHHcCC
Q 011647 116 REVQIMHHLT----GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVT-VVHYCHSMGV 189 (480)
Q Consensus 116 ~e~~~l~~l~----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~-~l~~lH~~~i 189 (480)
+|...+.++. +++++.-..-+....+..++||||++|++|.+..... ...+ ...++..++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 4555555543 3444322111222344568999999999998765432 1222 2345556655 4688999999
Q ss_pred eecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 190 vH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|+|+||.||++ ..++.++|+|||++..+.
T Consensus 279 ~H~D~hPgNilv---~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 279 FHADLHPGNIFV---LKDGKIIALDFGIVGRLS 308 (437)
T ss_pred eeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence 999999999999 456779999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-13 Score=117.62 Aligned_cols=110 Identities=34% Similarity=0.530 Sum_probs=97.7
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-ccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~ 443 (480)
.++++++...+++.|..+|.+++|.|+..||..++..++..+..+++..++..+|.+++|.|+|+||+.++... .....
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~ 82 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS 82 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH
Confidence 45778888999999999999999999999999999999988889999999999999999999999999987643 33445
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.+.+..+|+.+|.|++|+|+.+|+..+...+
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNL 113 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH
Confidence 6788999999999999999999998877654
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-13 Score=109.56 Aligned_cols=111 Identities=17% Similarity=0.261 Sum_probs=99.7
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCC--CCcceeHHHHHHHHccc---ccc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNGTIDYIEFITATMHM---NRV 441 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~I~~~eF~~~~~~~---~~~ 441 (480)
++.++..+++++|..||..+||+|+..+...+|+.+|.+|++.++......++.+ +--+|+|++|+.++..+ ...
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q 84 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ 84 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence 4566778999999999999999999999999999999999999999999998876 55789999999987643 345
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
.+.+++.+.++.||++++|+|...|++++.-.+++.
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGek 120 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEK 120 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhh
Confidence 677899999999999999999999999999999874
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-14 Score=142.14 Aligned_cols=253 Identities=21% Similarity=0.210 Sum_probs=186.3
Q ss_pred cccceeecceecccCCeEEEEEEEc-CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...+|..+..||.|.|+.|+.+.-. .++..|++|.+.........+ ..-..|+.+...+.-|.+++.++..|......
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456888899999999999988755 567889999886544333222 23346777777777799999988888777788
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|+-.|||+++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++..++ +..++.|||....+.-
T Consensus 342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAF 419 (524)
T ss_pred cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccccce
Confidence 89999999998877665556688899999999999999999999999999999999996432 7789999999864211
Q ss_pred CCccccCCCCcccc-ccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 224 GDVFKDLVGSAYYV-APEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 224 ~~~~~~~~gt~~y~-aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
......++-+++ .+|++.. .+..+.|++|||..+.+.++|...-... .....+..+..+. .+.....+
T Consensus 420 --~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~---~~~~~i~~~~~p~----~~~~~~~~ 490 (524)
T KOG0601|consen 420 --SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG---VQSLTIRSGDTPN----LPGLKLQL 490 (524)
T ss_pred --ecccccccccccccchhhccccccccccccccccccccccccCcccCccc---ccceeeecccccC----CCchHHhh
Confidence 111223344455 3555543 4778999999999999999985432111 1122233333222 13445778
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
..+...++.+++..|+.+.++..|.-|-.
T Consensus 491 q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 491 QVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred hhhhhhhcCCccccchhhhhhcccchhhh
Confidence 89999999999999999999988876643
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-13 Score=119.41 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=96.1
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCC
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
++.|+.|.++.||++... +..|++|+...... ....+.+|+.+++.+.+...+++++.+.. ...++|||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 367899999999999875 67899998754321 12345789999998873333456666543 34579999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCC-----eecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV-----MHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 152 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-----vH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
|.++.+. ......++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence 9887543 11123467899999999999985 9999999999995 34699999999764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.3e-13 Score=117.09 Aligned_cols=110 Identities=31% Similarity=0.491 Sum_probs=97.9
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-ccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~ 443 (480)
.++++++..++.++|..+|.+++|.|+..||..+++.+|...+..++..++..+|.+++|.|+|+||+.++... .....
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 88 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP 88 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence 46788889999999999999999999999999999999988889999999999999999999999999976542 33456
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
++.++.+|+.+|+|++|+|+.+|+..+...+
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~ 119 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKEL 119 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 6789999999999999999999998877654
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-13 Score=125.91 Aligned_cols=235 Identities=17% Similarity=0.236 Sum_probs=152.4
Q ss_pred EEEEEEEcCCCceEEEEEecccccCCh-hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC-----CeEEEEEecCCCCch
Q 011647 82 VTYLVTHKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-----HSVNLIMDLCAGGEL 155 (480)
Q Consensus 82 ~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~-----~~~~lv~e~~~~~~L 155 (480)
.||++.++..|.+|+=-.+......+. ..-++.+.-...+-++. |.|||+++.++.+. ....++.|||..|+|
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlv-HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~ 159 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLV-HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL 159 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHH-HHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence 466666666665543222211111111 11122233334455666 99999999988544 457899999999999
Q ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeecccceec---CCCC-
Q 011647 156 FDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF---KPGD- 225 (480)
Q Consensus 156 ~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~---~~~~- 225 (480)
..+|++. ..+......+|+.||+.||.|||+.. |+|+++..+-|++. .++.||+.----.... ....
T Consensus 160 ~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~~ap~s~h~s~~~~~~ 236 (458)
T KOG1266|consen 160 KQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGSVAPDSTHPSVNSTRE 236 (458)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecccCccccchhhhhhhH
Confidence 9999753 35888899999999999999999986 99999999999994 5666776421111000 0000
Q ss_pred -ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPF-WGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......|-++|.+||.=. .+.+.++|||++|.-..+|.-+..-- .+......-..+.+..+... ..--+.
T Consensus 237 ~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-------n~lqr~ 309 (458)
T KOG1266|consen 237 AEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-------NGLQRG 309 (458)
T ss_pred hhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-------CccccC
Confidence 111235678899999754 34677899999999999998876532 22222112222222211111 122367
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
++.+||...|..||++.+++.||.+
T Consensus 310 ~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 310 SITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred cCcccccCCCCCCcchhhhhcCcee
Confidence 8999999999999999999999985
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-11 Score=124.50 Aligned_cols=168 Identities=15% Similarity=0.170 Sum_probs=126.3
Q ss_pred EEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCC
Q 011647 85 LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH 164 (480)
Q Consensus 85 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~ 164 (480)
.|..+.++.+|.|..++.... ...+...+.++-|+.++ ||||+++++.++.++..|||+|-+. -|..++.+.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-- 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-- 101 (690)
T ss_pred ccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh--
Confidence 466677888999988865432 44567888899999999 9999999999999999999999984 455556543
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc-cccCCCCccccccccc
Q 011647 165 YSERAAANLCRQMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVL 242 (480)
Q Consensus 165 ~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~ 242 (480)
....+..-++||+.||.+|| +++++|++|..+.|+| +..|..||++|.++........ .....---.|..|+.+
T Consensus 102 -~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 102 -GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI 177 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc
Confidence 37778888999999999997 6789999999999999 5677799999998865432211 0001111124555543
Q ss_pred cccCCCchhHHHHHHHHHHHHhC
Q 011647 243 RRNYGAEADIWSAGVILYILLSG 265 (480)
Q Consensus 243 ~~~~~~~~DiwslG~il~~lltg 265 (480)
... .-..|.|-|||++++++.|
T Consensus 178 ~~s-~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPS-EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Ccc-ccchhhhhHHHHHHHHhCc
Confidence 211 1246999999999999998
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.4e-12 Score=120.97 Aligned_cols=318 Identities=18% Similarity=0.222 Sum_probs=205.9
Q ss_pred CCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE----eCCeEEEEEecCCC-C
Q 011647 79 QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----DRHSVNLIMDLCAG-G 153 (480)
Q Consensus 79 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~----~~~~~~lv~e~~~~-~ 153 (480)
--.+.|++....+|..|++|++........ .....-+++++++. |+|||.+.++|. .+..+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 346789999999999999999954333222 22334577888998 999999999876 45678999999987 6
Q ss_pred chHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 154 ELFDRIIA---------------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 154 ~L~~~l~~---------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
+|.++... +...+++.+|.++.|+..||.++|+.|+.-+-|.|.+||++ .+..|+|+..|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEecccce
Confidence 78776532 23478899999999999999999999999999999999995 3446888888877
Q ss_pred eecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHHcCCCcCCCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPP-FWGETEQSI-FDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~p-f~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 296 (480)
.....+. + |.+. --.+-|.=.||.+++.|.||..- +......+. ++.|. +.+
T Consensus 441 Dvl~~d~------~-------~~le--~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~y 494 (655)
T KOG3741|consen 441 DVLQEDP------T-------EPLE--SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTY 494 (655)
T ss_pred eeecCCC------C-------cchh--HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhh
Confidence 6654432 0 1111 12356999999999999999654 222223222 33332 357
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC---CcccccCCCCCC-cccHHHHHHHHhhhhhhHHHHHHH--HHHhh-----
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH---PWMRVDGDASDK-PLDIAVLTRMKQFRAMNKLKKVAL--KVIAE----- 365 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~----- 365 (480)
+.+++++|.-+...++++ -++.+++.| .||.+....... ..-+..+. +++.+...+ ++.. .++..
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~~~~~ff~vmes~q~~~d~mE~~Ls--~emENGRLf-Rll~Kln~I~dR~e~~ 570 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPMIGSRFFTVMESVQLKTDVMETELS--REMENGRLF-RLLLKLNFIDDRPEYV 570 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH--HHHhcchHH-HHHHHHhhhccCcccc
Confidence 889999999999999987 789999875 556543322211 00011111 112111111 1111 11111
Q ss_pred ---hhhH----HHHhhH-HHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 366 ---NLSE----EEIMGL-KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 366 ---~~~~----~~~~~~-~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
..++ ..+.-+ .-+|...|.|+.-.|+...+..||.+|.... ++.+ ++-.-|+...=-|+|.|...++.
T Consensus 571 ~D~~WSesG~~fmi~LFRDYlFHqvtedg~p~lDlaHvl~CLNKLDAG~-~EkI--~LvSrDE~t~IIvSY~ELK~~le 646 (655)
T KOG3741|consen 571 DDPDWSESGDRFMIKLFRDYLFHQVTEDGKPWLDLAHVLQCLNKLDAGI-QEKI--LLVSRDELTCIIVSYKELKTILE 646 (655)
T ss_pred cCCcchhccceehHHHHHHhhheEeccCCChhhhHHHHHHHhhhccccc-hhhe--eEeccCCCcEEEEEHHHHHHHHH
Confidence 0111 111112 2467888888888888888888888875542 2222 12222555555689998888653
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.6e-12 Score=108.10 Aligned_cols=148 Identities=17% Similarity=0.191 Sum_probs=110.8
Q ss_pred ecceecccCCeEEEEEEEcCCCceEEEEEecccccCC-----hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 71 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
....|-+|+-+.|+++.+. |+.+.||.=....... .-...+..+|+++|.++. --.|.-..-++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 4567889999999999885 5777777533222222 122466789999999987 4465544445566677789
Q ss_pred EEecCCC-CchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 146 IMDLCAG-GELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 146 v~e~~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+|||++| .++.+++.... ....+....+++.|-+.+.-||.++|||+||..+||++.+.+....+.++|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999987 46777776532 2333344789999999999999999999999999999988777777899999998653
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-12 Score=108.06 Aligned_cols=134 Identities=22% Similarity=0.291 Sum_probs=98.9
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChh-----cHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEE
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 147 (480)
..+++|+-+.+|.+.+. |..+++|.=.+.....+. ..++..+|+.++.++. --.|...+=+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 45789999999999764 344666653222222222 2355678999999887 445544444445677778999
Q ss_pred ecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 148 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
||++|..|.+.+... ...+++.+-.-+.-||..||||+||.++||++. ++.+.++|||++..
T Consensus 79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~ 140 (204)
T COG3642 79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEF 140 (204)
T ss_pred EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccc
Confidence 999998888888765 246777888888999999999999999999995 33399999999875
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-12 Score=111.74 Aligned_cols=113 Identities=27% Similarity=0.322 Sum_probs=100.5
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC-HHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
++++..++..|++-|.. ...+|.++.++|+.++.......+ ..-++.+|..+|.|+||+|+|.||+..+.....+..
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 57888888888888876 456999999999999999875433 455677999999999999999999999888888888
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHHhh
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQK 479 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~~~ 479 (480)
++.++.+|++||.|++|+||.+|+..+..++++|+.
T Consensus 99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~ 134 (193)
T KOG0044|consen 99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTG 134 (193)
T ss_pred HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999875
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.9e-12 Score=130.23 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=94.5
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHH---HHHHHHhhcCCCCcceeHHHHHHHHccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESE---VRQLMEAADVDGNGTIDYIEFITATMHMNR 440 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~---~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~ 440 (480)
..++..++++++++|+.+|+|++|.+ +..+++.+| ..+++.+ ++.+|..+|.|++|.|+|+||+.++.....
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 34666677899999999999999997 899999999 5888887 899999999999999999999999887666
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
..+++++..+|+.||+|++|+|+.+|+++++..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 678889999999999999999999999998876
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.6e-10 Score=108.42 Aligned_cols=239 Identities=17% Similarity=0.187 Sum_probs=159.5
Q ss_pred eecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEE------EEe-CCe
Q 011647 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA------YED-RHS 142 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~------~~~-~~~ 142 (480)
..++.||+|+-+.+|-.-...+ .+.|++..... ..-...+..|.+...||-+-.-+.| .-+ ...
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d---~VAKIYh~Ppp------a~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD---QVAKIYHAPPP------AAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchhhc---hhheeecCCCc------hHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 3467899999999996544322 35587764322 1112233445555556654331221 112 233
Q ss_pred EEEEEecCCCCc-hHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 143 VNLIMDLCAGGE-LFDRII------AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 143 ~~lv~e~~~~~~-L~~~l~------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
+-++|..+.|.. +..++. +.....+..+.+.++.++.+...||+.|.+-+|++++|+|+ .+++.|.|+|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV---sd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV---SDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee---ecCceEEEEcc
Confidence 778899888742 222221 12337788999999999999999999999999999999999 56777999986
Q ss_pred ccceecCCCCccccCCCCcccccccccc-----c-cCCCchhHHHHHHHHHHHHhC-CCCCCCCCh-----HHHHHHHHc
Q 011647 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR-----R-NYGAEADIWSAGVILYILLSG-VPPFWGETE-----QSIFDAILR 283 (480)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~~DiwslG~il~~lltg-~~pf~~~~~-----~~~~~~~~~ 283 (480)
..-.....+..+..-+|.+.|.+||.-+ + ..+...|.|.||+++++++.| +.||.+... ...-..|..
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 6554444555566678999999999653 2 346678999999999999886 999976321 111112222
Q ss_pred CCC------------cCCCCCCCCCCHHHHHHHHHhcccC--cCCCCCHHH
Q 011647 284 GHI------------DFSSDPWPNISSSAKDIVKKMLHAD--PKERLSAAE 320 (480)
Q Consensus 284 ~~~------------~~~~~~~~~~~~~~~~li~~~L~~d--p~~R~t~~~ 320 (480)
+.+ .....+|.-++++++.|..+|+... +.-|||++.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 221 1223345678999999999998763 568998764
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.1e-11 Score=110.03 Aligned_cols=143 Identities=25% Similarity=0.393 Sum_probs=104.5
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC-CCCeeEEEEEEEeC---CeEEEEEe
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYEDR---HSVNLIMD 148 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~~~~~~~~~---~~~~lv~e 148 (480)
+.||.|.++.||++.... |+.+++|+....... .....+.+|+++++.+.. +.++++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 578999999999998754 678999987543221 123568899999999873 23467777776553 36789999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS------------------------------------------ 186 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~------------------------------------------ 186 (480)
|++|.++.+.+.. ..++......++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888664432 346666666777777777777763
Q ss_pred --------------cCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 187 --------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 187 --------------~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..++|+|++|.||+++.+ .++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence 246999999999999532 145688999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-11 Score=104.99 Aligned_cols=97 Identities=27% Similarity=0.301 Sum_probs=87.6
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
..+..+|...|+|+.|.|+.+|+..+|.+.+ ..+..+.++.|+.++|.+.+|+|+|+||..++..+. .++.+|
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------~Wr~vF 130 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------QWRNVF 130 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------HHHHHH
Confidence 3567889999999999999999999999764 667899999999999999999999999999987765 799999
Q ss_pred HHhcCCCCCceehhhhHHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.||+|++|.|+..|+++....++
T Consensus 131 ~~~D~D~SG~I~~sEL~~Al~~~G 154 (221)
T KOG0037|consen 131 RTYDRDRSGTIDSSELRQALTQLG 154 (221)
T ss_pred HhcccCCCCcccHHHHHHHHHHcC
Confidence 999999999999999988776653
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.7e-11 Score=103.27 Aligned_cols=90 Identities=33% Similarity=0.467 Sum_probs=83.6
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
+..|+.+|+.+|+|++|.|+..||+.+|..+|+.++.+-++.+++.+|..++|.|.|++|+.++..+. .+.++|
T Consensus 123 i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~------~lt~~F 196 (221)
T KOG0037|consen 123 INQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ------RLTEAF 196 (221)
T ss_pred HHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH------HHHHHH
Confidence 46799999999999999999999999999999999999999999999988899999999999987765 789999
Q ss_pred HHhcCCCCCceehhhh
Q 011647 452 EYFDKDNSTSQWKSWN 467 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~ 467 (480)
+.+|++.+|.|+...-
T Consensus 197 r~~D~~q~G~i~~~y~ 212 (221)
T KOG0037|consen 197 RRRDTAQQGSITISYD 212 (221)
T ss_pred HHhccccceeEEEeHH
Confidence 9999999999988633
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.6e-11 Score=102.69 Aligned_cols=104 Identities=20% Similarity=0.238 Sum_probs=87.0
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc----------
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---------- 439 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~---------- 439 (480)
+.......+|..||.|+||.|+..||..++..+-..-.++.+.+.|+.+|.|++|.|+++|++.++..+.
T Consensus 61 d~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~ 140 (193)
T KOG0044|consen 61 DASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPE 140 (193)
T ss_pred CHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCc
Confidence 3344557899999999999999999999999887777788899999999999999999999999754321
Q ss_pred -ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 440 -RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 440 -~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
...+++.+...|+.+|.|+||.||.+|+.+....
T Consensus 141 ~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 141 DEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred ccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 1234577899999999999999999998765543
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.8e-11 Score=89.97 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=63.3
Q ss_pred HHHHhhHHHhhcccCC-CCCCcccHHHHhhhhcc-cCCCCCH-HHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMDT-DNSGTITFEELKAGLPK-LGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~-~~~g~i~~~e~~~~l~~-~~~~~~~-~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..+..+.++|+.||. +++|+|+..||+.++.. +|...+. .+++.|+...|.|+||.|+|+||+.++...
T Consensus 4 E~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 4 EKAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4456778999999999 99999999999999999 8877887 999999999999999999999999987543
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.9e-10 Score=99.13 Aligned_cols=108 Identities=25% Similarity=0.342 Sum_probs=91.5
Q ss_pred hhhhHHHHhhHHHhhcccCCC-CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcc-eeHHHHHHHHccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-IDYIEFITATMHMNRVE 442 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~-I~~~eF~~~~~~~~~~~ 442 (480)
..++.+++..+...|..+|.+ ++|.|+.+||..+. .+..+ --.+.++..++.+++|. |+|++|++.+.......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~ 100 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALN---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA 100 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcC---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence 348899999999999999999 99999999999988 33333 34566788889888888 99999999988765555
Q ss_pred cH-HHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 443 RE-EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 443 ~~-~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.. +.++-||+.||.|++|+|+.+|+.++.+.+..
T Consensus 101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~ 135 (187)
T KOG0034|consen 101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVG 135 (187)
T ss_pred cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHc
Confidence 54 49999999999999999999999999887754
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-09 Score=101.16 Aligned_cols=135 Identities=20% Similarity=0.153 Sum_probs=94.7
Q ss_pred EEEEEEcCCCceEEEEEecccccC---Ch-----hcHHHHHHHHHHHHHccCCCCe--eEEEEEEEe-----CCeEEEEE
Q 011647 83 TYLVTHKDTKQQFACKSISSRKLI---NR-----DDVEDVRREVQIMHHLTGHRNI--VELKGAYED-----RHSVNLIM 147 (480)
Q Consensus 83 V~~~~~~~~~~~vavK~~~~~~~~---~~-----~~~~~~~~e~~~l~~l~~hp~i--v~~~~~~~~-----~~~~~lv~ 147 (480)
|+++.. .|+.|.||........ .. .-...+.+|...+.+|. .-+| +.++.+++. ....++||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 555544 3567888876332210 00 01124778988888885 3333 344555543 23578999
Q ss_pred ecCCCC-chHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC----CCCCCeeEeeccccee
Q 011647 148 DLCAGG-ELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS----AEDSPLKATDFGLSVF 220 (480)
Q Consensus 148 e~~~~~-~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~----~~~~~ikl~Dfg~a~~ 220 (480)
|++++. +|.+++.. ....+......++.+++..+.-||..||+|+|+++.|||+... +++..+.|+||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999885 78887753 3456677788999999999999999999999999999999641 3456799999998854
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-10 Score=84.62 Aligned_cols=62 Identities=39% Similarity=0.654 Sum_probs=52.6
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHH----HHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES----EVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
+++++|+.+|.|++|+|+.+||..++..++...+.. .++.+|..+|.|++|.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 467899999999999999999999999998766554 45555999999999999999998764
|
... |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.8e-10 Score=97.60 Aligned_cols=100 Identities=25% Similarity=0.325 Sum_probs=88.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCC-----CHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
.++..++..+|.+++|.|+..||..++...+... +..++...|+.+|.|++|.|+..|+..++.......+.+++
T Consensus 44 ~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~ 123 (151)
T KOG0027|consen 44 EELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEEC 123 (151)
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHH
Confidence 4567788899999999999999999998865433 34589999999999999999999999999998888889999
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
...++..|.|+||.|+.+|+..++.
T Consensus 124 ~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 124 KEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 9999999999999999988877764
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.9e-10 Score=98.90 Aligned_cols=130 Identities=17% Similarity=0.170 Sum_probs=82.3
Q ss_pred EEEEEEEcCCCceEEEEEecccccC---------------------Ch--hcHHHHHHHHHHHHHccCC-CCeeEEEEEE
Q 011647 82 VTYLVTHKDTKQQFACKSISSRKLI---------------------NR--DDVEDVRREVQIMHHLTGH-RNIVELKGAY 137 (480)
Q Consensus 82 ~V~~~~~~~~~~~vavK~~~~~~~~---------------------~~--~~~~~~~~e~~~l~~l~~h-p~iv~~~~~~ 137 (480)
.||.|... .|..+|||+....... .. ......++|.+.|.++... -++++++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 38888875 4679999998532110 00 1134578899999999833 2577777653
Q ss_pred EeCCeEEEEEecCC--CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 138 EDRHSVNLIMDLCA--GGELFDRIIAKGHYSERAAANLCRQMVTVVHY-CHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 138 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~-lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
..+|||||++ |..+.. +... .++.+....++.+++..+.. +|+.||+|+||.+.|||+.. +.+.|+|
T Consensus 80 ----~~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~----~~~~iID 149 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD----GKVYIID 149 (188)
T ss_dssp ----TTEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET----TCEEE--
T ss_pred ----CCEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec----ceEEEEe
Confidence 2369999998 655544 3322 12245566778888885555 68999999999999999952 2699999
Q ss_pred cccceecC
Q 011647 215 FGLSVFFK 222 (480)
Q Consensus 215 fg~a~~~~ 222 (480)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99988654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.9e-10 Score=92.91 Aligned_cols=106 Identities=20% Similarity=0.225 Sum_probs=80.9
Q ss_pred HHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc
Q 011647 362 VIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR 440 (480)
Q Consensus 362 ~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~ 440 (480)
.+..+.+.. .+.++|..+|. +.|.|+..+|..+|... ......+++.+.|+.+|.|++|+|+..|+..++.....
T Consensus 48 ~lg~~~s~~---ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge 123 (160)
T COG5126 48 SLGFNPSEA---EINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGE 123 (160)
T ss_pred HcCCCCcHH---HHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcc
Confidence 334444443 35566677777 78888888888888764 45556788888888888888888888888888887777
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
..+.+++...++.+|.|++|.|+.+|+.++.
T Consensus 124 ~~~deev~~ll~~~d~d~dG~i~~~eF~~~~ 154 (160)
T COG5126 124 RLSDEEVEKLLKEYDEDGDGEIDYEEFKKLI 154 (160)
T ss_pred cCCHHHHHHHHHhcCCCCCceEeHHHHHHHH
Confidence 7888888888888888888888888887754
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.2e-10 Score=86.77 Aligned_cols=69 Identities=25% Similarity=0.423 Sum_probs=62.8
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+..+.++|+.|| .+++| .|+..||+.+|+. +|...++.+++.+++.+|.|++|.|+|+||+.++..
T Consensus 4 e~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 4 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 345677899999998 79999 5999999999999 899999999999999999999999999999998754
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=9e-11 Score=118.32 Aligned_cols=151 Identities=19% Similarity=0.300 Sum_probs=108.1
Q ss_pred HHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc-----c-----cCCCCccccccccccc
Q 011647 176 QMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-----K-----DLVGSAYYVAPEVLRR 244 (480)
Q Consensus 176 qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~-----~-----~~~gt~~y~aPE~~~~ 244 (480)
+++.|+.|+|. .++||+.|.|++|.+ +..+..||+-|+++....+...+ . -..-...|.|||++.+
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34489999996 589999999999999 45677999999998876542211 1 1123456999998875
Q ss_pred c-CCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCC-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 011647 245 N-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS-SDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321 (480)
Q Consensus 245 ~-~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~ 321 (480)
. .+.++|+||+|+++|.+.. |..-+........ ........... ......+|+++++-+.++|..++..||++..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch-hhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 4 7889999999999999995 4444443322111 11111111111 01114789999999999999999999999999
Q ss_pred hcCCccccc
Q 011647 322 LNHPWMRVD 330 (480)
Q Consensus 322 l~h~~~~~~ 330 (480)
+..|||.-.
T Consensus 263 ~~~~ff~D~ 271 (700)
T KOG2137|consen 263 LSIPFFSDP 271 (700)
T ss_pred hcccccCCc
Confidence 999999753
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=99.05 Aligned_cols=141 Identities=17% Similarity=0.212 Sum_probs=105.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEeccccc-----------------CC--hhcHHHHHHHHHHHHHccCC-
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-----------------IN--RDDVEDVRREVQIMHHLTGH- 127 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------------~~--~~~~~~~~~e~~~l~~l~~h- 127 (480)
-+.++..||-|--|.||.|.+. .|.++|||.-+.... .+ .-.....++|.++|.+|..+
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 4668899999999999999987 588999997532110 00 01134568999999999743
Q ss_pred CCeeEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC
Q 011647 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 128 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
-.+++.+++ +...+||||++|-.|...- ++.+.+..++..|++-+..+-..||||+|+.+-||++ +++
T Consensus 171 ~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~d 238 (304)
T COG0478 171 VKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TED 238 (304)
T ss_pred CCCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecC
Confidence 367777765 5678999999997664422 2456666777788888777779999999999999999 456
Q ss_pred CCeeEeecccceec
Q 011647 208 SPLKATDFGLSVFF 221 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~ 221 (480)
+.+.++||-.+...
T Consensus 239 g~~~vIDwPQ~v~~ 252 (304)
T COG0478 239 GDIVVIDWPQAVPI 252 (304)
T ss_pred CCEEEEeCcccccC
Confidence 67999999877653
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=94.53 Aligned_cols=100 Identities=22% Similarity=0.294 Sum_probs=87.4
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
.+..+|..+|.+++|.|+..||..++... ........++.+|..+|.+++|.|+.+||..++.......+.+++..+|.
T Consensus 54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~ 133 (158)
T PTZ00183 54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMID 133 (158)
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 46688889999999999999999887653 44556788999999999999999999999999876666678889999999
Q ss_pred HhcCCCCCceehhhhHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+|.|++|.|+.+|+..+...
T Consensus 134 ~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 134 EADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HhCCCCCCcCcHHHHHHHHhc
Confidence 999999999999999887754
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.5e-09 Score=95.21 Aligned_cols=110 Identities=21% Similarity=0.253 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHccCCCC--eeEEEEEEEeC----CeEEEEEecCCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 011647 111 VEDVRREVQIMHHLTGHRN--IVELKGAYEDR----HSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHY 183 (480)
Q Consensus 111 ~~~~~~e~~~l~~l~~hp~--iv~~~~~~~~~----~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~ 183 (480)
..+..+|...+..|. .-+ +++.+++.+.. ...++|+|++++ .+|.+++......+......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence 356788888887776 333 45566665542 245899999988 4788888775557788888999999999999
Q ss_pred HHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 184 lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
||+.||+|+|+++.|||+...+....+.|+||+-+...
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999976555567999999988753
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-09 Score=85.40 Aligned_cols=69 Identities=30% Similarity=0.461 Sum_probs=63.4
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++.+++..++++|..||.+++|.|+.+|++.+++.+| +++++++.++..+|.+++|.|+|+||+.++..
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 5678889999999999999999999999999999975 67889999999999999999999999998653
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.8e-09 Score=100.38 Aligned_cols=105 Identities=25% Similarity=0.390 Sum_probs=90.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
...++...++..+|+.||.+++|.++..++.+.+..+..+ +..+.+..+|..+|.|.||.++|+||.+.+. ..+
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E 81 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKE 81 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhH
Confidence 3456677789999999999999999999999999998765 6778889999999999999999999999874 345
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.++...|+.+|.|+||.|..+|+.+-.++++
T Consensus 82 ~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g 112 (463)
T KOG0036|consen 82 LELYRIFQSIDLEHDGKIDPNEIWRYLKDLG 112 (463)
T ss_pred HHHHHHHhhhccccCCccCHHHHHHHHHHhC
Confidence 5788999999999999999998866666554
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=5e-09 Score=89.68 Aligned_cols=100 Identities=22% Similarity=0.286 Sum_probs=86.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
..+..+|..+|.+++|.|+.++|..++... ........+..+|..+|.+++|.|+.+||..++.......+.+.+..+|
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~ 126 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 356889999999999999999999988764 3344567788899999999999999999999887665567788999999
Q ss_pred HHhcCCCCCceehhhhHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+.+|.|++|.|+.+|+..++.
T Consensus 127 ~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 127 READVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HhcCCCCCCcCcHHHHHHHHh
Confidence 999999999999999987764
|
|
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.8e-09 Score=80.87 Aligned_cols=70 Identities=23% Similarity=0.438 Sum_probs=61.4
Q ss_pred HHHHhhHHHhhcccCC-CC-CCcccHHHHhhhhc---ccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMDT-DN-SGTITFEELKAGLP---KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~-~~-~g~i~~~e~~~~l~---~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
++.+..+-.+|..||. ++ +|+|+.+||+.+++ .+|.++++++++.+++..|.|++|+|+|+||+.++..+
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4455667789999998 67 89999999999997 37999999999999999999999999999999887543
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.6e-09 Score=82.19 Aligned_cols=70 Identities=20% Similarity=0.354 Sum_probs=59.2
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-c----CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-L----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-~----~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+.-+..+.++|+.|| .|++| .|+.+||+.++.. + ....+..+++.++..+|.|++|.|+|+||+.++..+
T Consensus 6 e~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 6 EGAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 344567888999999 78998 5999999999976 3 344577899999999999999999999999987554
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.8e-09 Score=82.52 Aligned_cols=68 Identities=22% Similarity=0.360 Sum_probs=60.3
Q ss_pred HHHhhHHHhhcccCC-CC-CCcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 370 EEIMGLKEMFKSMDT-DN-SGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~-~~-~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.....+.++|..||. |+ +|.|+.+||+.++.. +|..++.++++.++..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 5 HAMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 345678999999997 97 799999999999986 567889999999999999999999999999988754
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.7e-09 Score=81.68 Aligned_cols=68 Identities=22% Similarity=0.436 Sum_probs=59.3
Q ss_pred HHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-cC----CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 371 EIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-LG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 371 ~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
-+..++++|+.|| .+++| .|+..||+.+|+. +| ..++.++++.++..+|.|++|.|+|+||+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3467899999997 99999 5999999999986 44 45688999999999999999999999999987543
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.4e-08 Score=84.89 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=100.7
Q ss_pred ecccCCeEEEEEEEcCCCceEEEEEeccc---ccCChhcHHHHHHHHHHHHHccC-CCCeeEEEEEEEe----CCeEEEE
Q 011647 75 LGRGQFGVTYLVTHKDTKQQFACKSISSR---KLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYED----RHSVNLI 146 (480)
Q Consensus 75 lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~~~~~~~~----~~~~~lv 146 (480)
-|+||.+-|+.....+ +.+-+|.-... ....+.....+.+|+..+.+|.. .-.++++...... .-..+||
T Consensus 26 ~~rgG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence 4678889999877643 35888876421 11113345789999999998862 1124455422111 1236799
Q ss_pred EecCCC-CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 147 MDLCAG-GELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 147 ~e~~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+|-+.| .+|.+++... .+.+......++.+++.++.-||..|+.|+|+.+.||++...+ ...++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccch
Confidence 998865 6887777553 3467777789999999999999999999999999999996422 33599999987764
|
|
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.6e-09 Score=79.88 Aligned_cols=69 Identities=25% Similarity=0.396 Sum_probs=60.9
Q ss_pred HHHHhhHHHhhcccCC--CCCCcccHHHHhhhhcc-cCCC----CCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPK-LGTR----LSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~--~~~g~i~~~e~~~~l~~-~~~~----~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+++++.++++|..||. +++|.|+.+||..+++. +|.. ++.++++.++..+|.+++|.|+|++|+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 5667889999999999 89999999999999986 5543 45899999999999999999999999998753
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-08 Score=82.22 Aligned_cols=101 Identities=21% Similarity=0.319 Sum_probs=85.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcc-cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
.++.++...+|.++.|.|+.++|...+.. ++..-+..++..+|+.+|.|.+|+|++.+|+.+...+..-.+.+++...-
T Consensus 69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMI 148 (172)
T KOG0028|consen 69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMI 148 (172)
T ss_pred HHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHH
Confidence 34566777788899999999999888654 66666889999999999999999999999999988888788888998888
Q ss_pred HHhcCCCCCceehhhhHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.-+|.|++|.|+.+||.++++.
T Consensus 149 eEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 149 EEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHhcccccccccHHHHHHHHhc
Confidence 8999999999999998877653
|
|
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.9e-09 Score=74.77 Aligned_cols=60 Identities=33% Similarity=0.476 Sum_probs=54.8
Q ss_pred HHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+++|..+|.+++|.|+.+|+..++..+|. +.++++.++..+|.+++|.|+|+||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 57899999999999999999999998875 7889999999999999999999999988643
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.7e-08 Score=69.92 Aligned_cols=51 Identities=45% Similarity=0.705 Sum_probs=47.7
Q ss_pred CCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 386 NSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.+|.|+.++|..++..+|.. +++++++.+|..+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999888999 9999999999999999999999999999864
|
... |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=98.74 E-value=3e-08 Score=72.00 Aligned_cols=60 Identities=25% Similarity=0.336 Sum_probs=51.9
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHccccc----cccHHHHHHHHHHhcCCCCCceehhhhHHH
Q 011647 411 VRQLMEAADVDGNGTIDYIEFITATMHMNR----VEREEHLYKAFEYFDKDNSTSQWKSWNMRL 470 (480)
Q Consensus 411 ~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~----~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~ 470 (480)
++.+|..+|.|++|.|+.+||..++..... ....+.+..+|+.+|+|+||.|+.+|+..+
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 678999999999999999999999877653 334566778899999999999999999865
|
... |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.5e-10 Score=110.15 Aligned_cols=244 Identities=17% Similarity=0.168 Sum_probs=168.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC-eeEEEEEEEeCCeE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-IVELKGAYEDRHSV 143 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~-iv~~~~~~~~~~~~ 143 (480)
....|.....+++|+++++++.+...+...+ .+++... ...+-++++|.+++ ||| .+..++-++.+...
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n-~P~~~v~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVN-NPNPVVRYLEDYDGEDYL 309 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHcc-CCCCcccccccCCccccc
Confidence 3344666678999999999998887664444 6665322 44567889999998 999 77777778888889
Q ss_pred EEEEecCCCC-c-hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 144 NLIMDLCAGG-E-LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 144 ~lv~e~~~~~-~-L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+++++++.++ + ........-.+.+-....+.+.-+++++++|+.-=+|+| ||+.. .+..+..||+....+
T Consensus 310 ~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s----~~~~~~~~~~v~~~L 381 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS----EEEVKLLDFAVPPQL 381 (829)
T ss_pred chhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc----ccccccccccCCccc
Confidence 9999999877 2 211111122244455566777888899999998778999 88874 355899999998887
Q ss_pred CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC---CCCCCCC
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS---DPWPNIS 297 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 297 (480)
..........+++.++|||+..+ .+....|+|++|+-..++.-|.+|-.... .....+-.+.-.+.. ..|. +
T Consensus 382 ~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~~g~~p~s~~L~~~~aw~--~ 457 (829)
T KOG0576|consen 382 TRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPMIGNGPNSPMLTDKSAWS--P 457 (829)
T ss_pred CcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCc--cccCCCCCCCCccccchhhhcC--c
Confidence 76655677889999999997764 58888999999987777777776653311 010000000000000 0010 1
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..-+++...|+..-|..|+....++.|.+|...
T Consensus 458 ~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 458 VFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred ccccCCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 111247788999999999999999999888643
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.1e-08 Score=75.92 Aligned_cols=70 Identities=17% Similarity=0.316 Sum_probs=59.4
Q ss_pred HHHHhhHHHhhcc-cCCCCCC-cccHHHHhhhhccc-----CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKS-MDTDNSG-TITFEELKAGLPKL-----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~-~D~~~~g-~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..+..|..+|+. +|.+++| .|+.+||+.++... +....+.+++.++..+|.|+||.|+|+||+.++..+
T Consensus 5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4456778899999 8888986 99999999999875 445567899999999999999999999999987543
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.3e-08 Score=84.55 Aligned_cols=99 Identities=23% Similarity=0.264 Sum_probs=79.4
Q ss_pred HHhhcccCCCCCCc-ccHHHHhhhhcccCCCCCHH-HHHHHHHhhcCCCCcceeHHHHHHHHccccc-------cccHHH
Q 011647 376 KEMFKSMDTDNSGT-ITFEELKAGLPKLGTRLSES-EVRQLMEAADVDGNGTIDYIEFITATMHMNR-------VEREEH 446 (480)
Q Consensus 376 ~~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~~~~~-~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-------~~~~~~ 446 (480)
.++|+.||.+++|. |+.++|...+...-.+-... .++-.|+.+|.|++|.|+.+|+..++..+.. ...++-
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 36788889888888 99999999999876554444 8888999999999999999999998764322 222345
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+...|..+|.|+||.|+.+|+..+...-
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 7889999999999999999998776543
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.5e-07 Score=98.81 Aligned_cols=207 Identities=22% Similarity=0.265 Sum_probs=146.3
Q ss_pred cHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE----EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 011647 110 DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185 (480)
Q Consensus 110 ~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~----lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH 185 (480)
.+.....|+..+.+.. |+|++.++.+........ +..++|...++...+..-+..+....+.+..++++||.|+|
T Consensus 225 ~i~~~E~e~~~l~k~~-~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 225 EIQTTEIELESLSKIA-HDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHHHHHhhc-cccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHH
Confidence 3455566777888887 999999998875444333 44688999999999999999999999999999999999999
Q ss_pred HcCCeecCCCCcceecccCCCCCCeeEe--ecccceecCCCCccccCCCCcccccccccccc---CCCchhHHHHHHHHH
Q 011647 186 SMGVMHRDLKPENFLFSSSAEDSPLKAT--DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILY 260 (480)
Q Consensus 186 ~~~ivH~Dlkp~Nil~~~~~~~~~ikl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~ 260 (480)
+..+.|.-|..+-..-...+..+.+.++ ||+.+.............-+..+.+||..... .+...|+|.+|..+.
T Consensus 304 ~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~ 383 (1351)
T KOG1035|consen 304 SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLL 383 (1351)
T ss_pred HhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHh
Confidence 9866555554442222222445566666 88888776544433333445567788877544 334469999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC-HHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 261 ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS-SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 261 ~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+..|..+-.. ......++ +..+ ....+++.+|+.-++++|+++.+++.|+|.+...
T Consensus 384 ~~~~~~~i~~~---~~~~~~~l-----------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 384 QLSQGEDISEK---SAVPVSLL-----------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPT 441 (1351)
T ss_pred hhhhcCccccc---ccchhhhh-----------ccccchhhhhhhhhhcchhhhhccchhhhhhchhccccc
Confidence 99887554211 11111111 1112 2678899999999999999999999999987543
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.7e-07 Score=80.76 Aligned_cols=141 Identities=19% Similarity=0.217 Sum_probs=87.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcH------HHHHHHHHHHHHcc--CCCCeeEEEEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV------EDVRREVQIMHHLT--GHRNIVELKGAY 137 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~------~~~~~e~~~l~~l~--~hp~iv~~~~~~ 137 (480)
...|.+.+.+-......|.+..- .|..+++|............. ....+++..+.++. +.-..+.++.+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 45677777776666666655443 467899998764332111111 11234444444443 122223322222
Q ss_pred -----EeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 138 -----EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 138 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
......++||||++|..|.+... +++ .+...+.+++.-||+.|++|+|.+|.|++++ ++.+++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~~i~i 175 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NNGIRI 175 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CCcEEE
Confidence 22344568999999988866432 233 2445677889999999999999999999995 334999
Q ss_pred eeccccee
Q 011647 213 TDFGLSVF 220 (480)
Q Consensus 213 ~Dfg~a~~ 220 (480)
+||+..+.
T Consensus 176 ID~~~k~~ 183 (229)
T PF06176_consen 176 IDTQGKRM 183 (229)
T ss_pred EECccccc
Confidence 99987653
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-07 Score=67.69 Aligned_cols=61 Identities=44% Similarity=0.768 Sum_probs=56.2
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
+..+|..+|.+++|.|+.+|+..++..++...+.+.+..++..+|.+++|.|+|++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999999999998764
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.3e-07 Score=76.06 Aligned_cols=65 Identities=20% Similarity=0.270 Sum_probs=55.5
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.......+.-+|..+|.|+||.|+.+||..+. ..+.+..+..+|..+|.|+||.||++||..++.
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 34556778899999999999999999999876 334577888999999999999999999999883
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.4e-06 Score=75.43 Aligned_cols=129 Identities=20% Similarity=0.252 Sum_probs=91.3
Q ss_pred cceeecceecccCC-eEEEEEEEcCCCceEEEEEecccccCCh------------------hcHHHHHHHHHHHHHccC-
Q 011647 67 NTYIFGRELGRGQF-GVTYLVTHKDTKQQFACKSISSRKLINR------------------DDVEDVRREVQIMHHLTG- 126 (480)
Q Consensus 67 ~~y~~~~~lG~G~~-g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------~~~~~~~~e~~~l~~l~~- 126 (480)
..+++++.||.|.- |.||++... |+.||+|+...-..... .....|..|.+...+|..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 57899999999999 999999875 67999999321111000 112457788888887762
Q ss_pred -CCCe--eEEEEEEEeC------------------CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 011647 127 -HRNI--VELKGAYEDR------------------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185 (480)
Q Consensus 127 -hp~i--v~~~~~~~~~------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH 185 (480)
+.++ |+.++|..-. ....||.||.+... .+. .+-+.+|++-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~----~~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQ----IRDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccc----hhHHHHHHHHHHHHH
Confidence 4455 8999987321 12357888776543 122 234567888899999
Q ss_pred HcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 186 ~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..||+-+|+++.|..= -||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~~--------G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYRG--------GKLVDFSSS 206 (207)
T ss_pred HCCeeeccCccccccC--------CEEEecccC
Confidence 9999999999999872 389999964
|
|
| >KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.7e-08 Score=81.16 Aligned_cols=72 Identities=28% Similarity=0.469 Sum_probs=68.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.|+..+++.+...|+.+|.+.||+|+..||+.+|.+||.+.|.-.++.|+..+|.|.||+|+|.||+-++..
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 578888999999999999999999999999999999999999999999999999999999999999987654
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.2e-06 Score=80.36 Aligned_cols=73 Identities=21% Similarity=0.250 Sum_probs=55.2
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCC-CeeEEEEEEEeCCeEEEEEecCC
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR-NIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp-~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
..||+|..+.||+. .+..+++|...... ....+.+|.++++.+.... -+++++.+....+...+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 57899999999983 24568889875321 2355789999999887332 25788888888888899999999
Q ss_pred CCc
Q 011647 152 GGE 154 (480)
Q Consensus 152 ~~~ 154 (480)
|.+
T Consensus 78 G~~ 80 (226)
T TIGR02172 78 GKR 80 (226)
T ss_pred Ccc
Confidence 863
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >PF14658 EF-hand_9: EF-hand domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-07 Score=65.61 Aligned_cols=60 Identities=23% Similarity=0.474 Sum_probs=56.5
Q ss_pred HhhcccCCCCCCcccHHHHhhhhcccCC-CCCHHHHHHHHHhhcCCCC-cceeHHHHHHHHc
Q 011647 377 EMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGN-GTIDYIEFITATM 436 (480)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~-g~I~~~eF~~~~~ 436 (480)
.+|..||.++.|.|...+++..|+.++. .+.+.+++.+.+.+|+++. |.|+|+.|+.++.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 3699999999999999999999999987 9999999999999999988 9999999999875
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.5e-07 Score=79.95 Aligned_cols=139 Identities=17% Similarity=0.162 Sum_probs=94.0
Q ss_pred eecccCCeEEEEEEEcCCCceEEEEEecccccCChh----------------c-----HHHHHHHHHHHHHcc-CCCCee
Q 011647 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD----------------D-----VEDVRREVQIMHHLT-GHRNIV 131 (480)
Q Consensus 74 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----------------~-----~~~~~~e~~~l~~l~-~hp~iv 131 (480)
.|+.|--+.||+|... ++..+|+|++......-.. . ..-.++|+..|+++. .+-.++
T Consensus 55 ~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 5778888899999873 4789999998643221100 0 112356777777775 234556
Q ss_pred EEEEEEEeCCeEEEEEecCCCCch-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCC
Q 011647 132 ELKGAYEDRHSVNLIMDLCAGGEL-FDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 132 ~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
+.+.+. .-.+||||+....+ .-.|.. -.+..+.+..+..++++.+.-|-. .|+||+||..-|||+. ++.
T Consensus 134 ~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~----~~~ 204 (268)
T COG1718 134 EPIAFR----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH----DGE 204 (268)
T ss_pred Cceeec----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE----CCe
Confidence 666653 23689999954311 111211 123334677888899999988766 8999999999999994 566
Q ss_pred eeEeecccceecC
Q 011647 210 LKATDFGLSVFFK 222 (480)
Q Consensus 210 ikl~Dfg~a~~~~ 222 (480)
+.|+|||.|....
T Consensus 205 p~iID~~QaV~~~ 217 (268)
T COG1718 205 PYIIDVSQAVTID 217 (268)
T ss_pred EEEEECccccccC
Confidence 9999999988654
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=8.6e-07 Score=90.07 Aligned_cols=158 Identities=18% Similarity=0.217 Sum_probs=97.4
Q ss_pred cCCcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--------------------Ch-------hc
Q 011647 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--------------------NR-------DD 110 (480)
Q Consensus 58 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------~~-------~~ 110 (480)
.|.+.++.-..|.- ..|+.++-|.||+|+.+. |+.||||+.++.-.. .. ..
T Consensus 117 LG~~iee~F~eF~~-~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~v 194 (517)
T COG0661 117 LGRPIEELFSEFEP-EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEV 194 (517)
T ss_pred hCCCHHHHHHHcCC-CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHH
Confidence 34444443333332 679999999999999986 999999998643210 00 00
Q ss_pred ----HHH------HHHHHHHHHHcc----CCCCeeEEEEEEEeCCeEEEEEecCCCCchHHHH--HhcCCCCHHHHHHHH
Q 011647 111 ----VED------VRREVQIMHHLT----GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLC 174 (480)
Q Consensus 111 ----~~~------~~~e~~~l~~l~----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~i~ 174 (480)
.+. +.+|...+.+++ +.|++.-..=+++-.+.-.++|||++|..+.+.. .. ..++...+....
T Consensus 195 v~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~ 273 (517)
T COG0661 195 VDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELL 273 (517)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHH
Confidence 111 234444444443 3454433322334445668999999998887763 33 445543333222
Q ss_pred HHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 175 ~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
.++. +..+-..|++|.|.+|.||++. .++.+.+.|||+...+.+
T Consensus 274 ~~~f--~~q~~~dgffHaDpHpGNi~v~---~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 274 VRAF--LRQLLRDGFFHADPHPGNILVR---SDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHH--HHHHHhcCccccCCCccceEEe---cCCcEEEEcCcceecCCH
Confidence 2211 2334458999999999999994 567899999999876543
|
|
| >KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.5e-07 Score=97.96 Aligned_cols=112 Identities=20% Similarity=0.349 Sum_probs=94.6
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC--H-----HHHHHHHHhhcCCCCccee
Q 011647 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS--E-----SEVRQLMEAADVDGNGTID 427 (480)
Q Consensus 355 l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~--~-----~~~~~~~~~~d~~~~g~I~ 427 (480)
+++-+...-.+..+++.+.++.-+|++||.+.+|.++.++|+.||+.+|+++. + .+.+.++..+|++.+|.|+
T Consensus 2235 lEQqIqarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vs 2314 (2399)
T KOG0040|consen 2235 LEQQIQARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVS 2314 (2399)
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCccc
Confidence 34444433345678999999999999999999999999999999999998872 3 3789999999999999999
Q ss_pred HHHHHHHHcc--ccccccHHHHHHHHHHhcCCCCCceehhhh
Q 011647 428 YIEFITATMH--MNRVEREEHLYKAFEYFDKDNSTSQWKSWN 467 (480)
Q Consensus 428 ~~eF~~~~~~--~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~ 467 (480)
..+|++++.. ..+..+.++|..||+.+|. +..||+..++
T Consensus 2315 l~dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~ 2355 (2399)
T KOG0040|consen 2315 LQDYMAFMISKETENILSSEEIEDAFRALDA-GKPYVTKEEL 2355 (2399)
T ss_pred HHHHHHHHHhcccccccchHHHHHHHHHhhc-CCccccHHHH
Confidence 9999998765 3445666799999999999 7789999876
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.7e-06 Score=80.62 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=55.4
Q ss_pred eecccCC-eEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 74 ELGRGQF-GVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 74 ~lG~G~~-g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
.|-.|.+ +.||+.... +..+.+|+..... ...+.+|+++++.+..+--+++++++....+..++|||+++|
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 3445555 889998754 3578888864322 245678999998887665577888888777778999999999
Q ss_pred CchHH
Q 011647 153 GELFD 157 (480)
Q Consensus 153 ~~L~~ 157 (480)
.+|..
T Consensus 77 ~~l~~ 81 (244)
T cd05150 77 VPAAA 81 (244)
T ss_pred ccHhH
Confidence 77653
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 480 | ||||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-75 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-75 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-75 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 1e-73 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 8e-73 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-71 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 3e-71 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 8e-65 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 9e-60 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-59 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-59 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 6e-59 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 7e-59 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 7e-59 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 7e-59 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-58 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 2e-57 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 1e-56 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-56 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 8e-56 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-55 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-54 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-54 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 6e-54 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 7e-54 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 9e-54 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 8e-53 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 9e-53 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 9e-53 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-52 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 3e-51 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-50 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 2e-50 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 2e-50 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 2e-50 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 2e-50 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 2e-50 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-50 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 2e-50 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 2e-50 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 2e-50 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 2e-50 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 3e-50 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 3e-50 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 8e-50 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 1e-49 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 2e-49 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-49 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 3e-49 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 7e-48 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 8e-48 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-47 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 6e-47 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 6e-47 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 6e-47 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 7e-47 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 8e-47 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 1e-46 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-46 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-46 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-46 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 2e-46 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 2e-46 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-46 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 8e-46 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 8e-46 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 9e-46 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-45 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 1e-45 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-45 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 3e-44 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 2e-43 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 2e-43 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 5e-43 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 3e-41 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 1e-40 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 1e-40 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 1e-40 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 2e-39 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 5e-39 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 6e-39 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 6e-39 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 7e-39 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 7e-39 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 7e-39 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 7e-39 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 8e-39 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 8e-39 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 8e-39 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 9e-39 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 9e-39 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 9e-39 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 1e-38 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 1e-38 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 2e-38 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 2e-38 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-38 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-38 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-38 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 3e-38 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-38 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-38 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 4e-38 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 4e-38 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 4e-38 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 5e-38 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-38 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 6e-38 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-38 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-38 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 8e-38 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 8e-38 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 8e-38 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 9e-38 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 9e-38 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 1e-37 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-37 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-37 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-37 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 2e-37 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-37 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 3e-37 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-37 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-37 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-37 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 3e-37 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 3e-37 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-37 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-37 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 4e-37 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 4e-37 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 5e-37 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 5e-37 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 5e-37 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 5e-37 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-37 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 6e-37 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 6e-37 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 7e-37 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 9e-37 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 9e-37 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-36 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-36 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 1e-36 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 2e-36 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-36 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 5e-36 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 5e-36 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 7e-36 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 9e-36 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-35 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-35 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-35 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-35 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-35 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 3e-35 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-35 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 7e-35 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 9e-35 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 4e-34 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 5e-34 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 5e-34 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 7e-33 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 1e-32 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 1e-32 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 1e-32 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 1e-32 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 1e-32 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-32 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 1e-32 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 1e-32 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 1e-32 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 1e-32 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-32 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 2e-32 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 2e-32 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 2e-32 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-32 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-32 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-32 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-32 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-32 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-32 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 3e-32 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 3e-32 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 4e-32 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 5e-32 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 5e-32 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 5e-32 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 5e-32 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 6e-32 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 6e-32 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 6e-32 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 7e-32 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 7e-32 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 7e-32 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 7e-32 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 7e-32 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 8e-32 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 8e-32 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 8e-32 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 8e-32 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 8e-32 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 9e-32 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 9e-32 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 9e-32 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 9e-32 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 9e-32 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-31 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-31 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-31 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 1e-31 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 1e-31 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 1e-31 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 1e-31 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 1e-31 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 1e-31 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 1e-31 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-31 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 1e-31 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 1e-31 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-31 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-31 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-31 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-31 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 2e-31 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-31 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 3e-31 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-31 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-31 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 4e-31 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 4e-31 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 4e-31 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 4e-31 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 4e-31 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 8e-31 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 8e-31 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 9e-31 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 1e-30 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-30 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 1e-30 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 1e-30 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 1e-30 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 1e-30 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-30 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-30 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-30 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 2e-30 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-29 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-29 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-29 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-29 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 1e-29 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-29 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 2e-29 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 2e-29 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 2e-29 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 2e-29 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 2e-29 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-29 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-29 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 2e-29 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-29 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 2e-29 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-29 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 2e-29 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-29 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-29 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 2e-29 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 2e-29 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 2e-29 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 3e-29 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 3e-29 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 5e-29 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 6e-29 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 6e-29 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 7e-29 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-29 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 4e-28 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-28 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-28 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 7e-28 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 8e-28 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 8e-28 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 1e-27 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 5e-27 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 5e-27 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 5e-27 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 5e-27 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 5e-27 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 5e-27 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 6e-27 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 6e-27 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 1e-26 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 3e-26 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-26 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 3e-26 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 3e-26 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 4e-26 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 5e-26 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 5e-26 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 5e-26 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 5e-26 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 6e-26 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 7e-26 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-25 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 3e-25 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 4e-25 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 4e-25 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 5e-25 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 7e-25 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 7e-25 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 8e-25 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 8e-25 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 8e-25 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 1e-24 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-24 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-24 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-24 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-24 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 2e-24 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 2e-24 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 2e-24 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 2e-24 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 3e-24 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 3e-24 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 3e-24 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 3e-24 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 3e-24 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 3e-24 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 3e-24 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-24 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 4e-24 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-24 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 5e-24 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-24 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 6e-24 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 6e-24 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 6e-24 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 7e-24 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 7e-24 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-23 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 1e-23 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 1e-23 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 1e-23 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 2e-23 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-23 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-23 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-23 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 5e-23 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 6e-23 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 7e-23 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 9e-23 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 9e-23 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 1e-22 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 1e-22 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 1e-22 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-22 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 3e-22 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 3e-22 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-22 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 7e-22 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 8e-22 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 9e-22 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 9e-22 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-21 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 5e-21 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 5e-21 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 1e-20 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-20 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 3e-20 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 3e-20 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 3e-20 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 3e-20 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 4e-20 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 4e-20 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-20 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 5e-20 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 6e-20 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 6e-20 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-20 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 6e-20 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-20 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-20 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 6e-20 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-20 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 6e-20 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 6e-20 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 6e-20 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 7e-20 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 7e-20 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 8e-20 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 8e-20 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 8e-20 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 8e-20 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 9e-20 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 9e-20 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-19 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-19 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-19 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 1e-19 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-19 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 1e-19 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-19 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 1e-19 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 1e-19 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-19 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-19 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-19 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-19 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-19 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-19 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-19 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 2e-19 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-19 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 2e-19 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 2e-19 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-19 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 3e-19 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 3e-19 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 3e-19 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 4e-19 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-19 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-19 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 5e-19 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 6e-19 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 8e-19 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 8e-19 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 9e-19 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 9e-19 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 9e-19 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 9e-19 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 9e-19 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 9e-19 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 9e-19 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-18 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 1e-18 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 1e-18 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 1e-18 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-18 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 1e-18 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-18 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-18 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 1e-18 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 1e-18 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-18 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-18 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-18 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-18 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-18 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-18 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-18 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 2e-18 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-18 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-18 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-18 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 2e-18 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-18 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-18 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 5e-18 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 5e-18 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 6e-18 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 6e-18 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 7e-18 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 8e-18 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-17 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-17 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 1e-17 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-17 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 2e-17 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-17 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-17 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-17 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-17 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-17 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-17 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 2e-17 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-17 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-17 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-17 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 2e-17 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-17 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 2e-17 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-17 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 3e-17 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 3e-17 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 3e-17 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 3e-17 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 3e-17 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 3e-17 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 3e-17 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 3e-17 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 3e-17 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 3e-17 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-17 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 3e-17 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 3e-17 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 3e-17 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 3e-17 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 3e-17 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-17 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-17 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-17 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 4e-17 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 4e-17 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-17 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-17 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 4e-17 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 4e-17 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 4e-17 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 4e-17 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-17 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-17 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 5e-17 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 5e-17 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 5e-17 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 5e-17 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 5e-17 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 5e-17 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-17 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 5e-17 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 5e-17 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-17 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 5e-17 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 5e-17 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 5e-17 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 6e-17 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 7e-17 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 7e-17 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 7e-17 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 8e-17 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 1e-16 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-16 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-16 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-16 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-16 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 2e-16 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 2e-16 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-16 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 6e-16 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 6e-16 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 6e-16 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 6e-16 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 7e-16 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 7e-16 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 7e-16 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 7e-16 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 7e-16 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 8e-16 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-16 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 8e-16 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 8e-16 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 8e-16 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 9e-16 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 1e-15 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-15 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-15 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 1e-15 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 1e-15 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 1e-15 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 1e-15 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 1e-15 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 1e-15 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 1e-15 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 1e-15 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 1e-15 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 1e-15 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-15 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-15 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-15 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 1e-15 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-15 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-15 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 1e-15 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-15 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 1e-15 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-15 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 2e-15 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 2e-15 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-15 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 2e-15 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 2e-15 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-15 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 2e-15 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-15 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 2e-15 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-15 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-15 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 2e-15 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-15 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 2e-15 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-15 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-15 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-15 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 2e-15 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 2e-15 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-15 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 2e-15 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-15 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-15 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-15 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 2e-15 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-15 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 2e-15 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 2e-15 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 2e-15 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 2e-15 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 2e-15 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 2e-15 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-15 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-15 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-15 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-15 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-15 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-15 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-15 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-15 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-15 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-15 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 3e-15 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-15 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 3e-15 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 3e-15 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 3e-15 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 3e-15 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 3e-15 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-15 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 3e-15 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 3e-15 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 3e-15 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 3e-15 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 3e-15 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 4e-15 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 5e-15 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-15 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 5e-15 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 6e-15 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 6e-15 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 6e-15 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 7e-15 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 8e-15 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 8e-15 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 1e-14 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 1e-14 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 1e-14 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 1e-14 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 1e-14 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-14 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 1e-14 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 1e-14 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 1e-14 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 1e-14 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 1e-14 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-14 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-14 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 2e-14 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-14 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-14 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 2e-14 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-14 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-14 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 2e-14 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 2e-14 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-14 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-14 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-14 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-14 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-14 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-14 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 3e-14 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-14 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-14 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-14 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-14 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-14 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-14 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-14 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 4e-14 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 4e-14 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-14 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 4e-14 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 5e-14 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-14 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-14 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 6e-14 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 6e-14 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 6e-14 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-14 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-14 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 6e-14 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 6e-14 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 6e-14 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 7e-14 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 7e-14 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 8e-14 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-14 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 8e-14 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 9e-14 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-14 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-13 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 1e-13 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 1e-13 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-13 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-13 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-13 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-13 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-13 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-13 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-13 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-13 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 2e-13 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 2e-13 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 2e-13 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 3e-13 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-13 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 3e-13 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 3e-13 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 3e-13 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-13 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 3e-13 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 3e-13 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-13 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-13 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 3e-13 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 3e-13 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 3e-13 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 3e-13 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 3e-13 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 3e-13 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 3e-13 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 4e-13 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 4e-13 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 4e-13 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 4e-13 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 4e-13 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 4e-13 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 4e-13 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 4e-13 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 4e-13 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 4e-13 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 4e-13 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 4e-13 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 4e-13 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 4e-13 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 4e-13 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 4e-13 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 4e-13 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 4e-13 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 4e-13 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 4e-13 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 4e-13 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 5e-13 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-13 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-13 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 5e-13 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-13 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-13 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 5e-13 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 6e-13 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 6e-13 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-13 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-13 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-13 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 7e-13 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 7e-13 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 7e-13 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 8e-13 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 8e-13 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-13 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 8e-13 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 9e-13 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 9e-13 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 9e-13 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-12 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-12 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-12 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 1e-12 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 1e-12 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 1e-12 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 1e-12 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 1e-12 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-12 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 1e-12 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-12 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 1e-12 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 1e-12 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 1e-12 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 1e-12 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 1e-12 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 2e-12 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-12 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 2e-12 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-12 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-12 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-12 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-12 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 2e-12 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-12 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-12 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 2e-12 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 2e-12 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-12 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 2e-12 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 2e-12 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-12 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-12 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-12 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-12 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-12 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-12 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-12 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 3e-12 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-12 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-12 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 3e-12 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-12 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 3e-12 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 3e-12 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 3e-12 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-12 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-12 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 4e-12 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 5e-12 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 5e-12 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 5e-12 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 5e-12 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 5e-12 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 5e-12 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 6e-12 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 6e-12 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 7e-12 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-12 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 7e-12 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 7e-12 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 7e-12 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 8e-12 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 8e-12 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 8e-12 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-11 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 1e-11 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 1e-11 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-11 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-11 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-11 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 1e-11 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-11 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 1e-11 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 2e-11 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-11 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-11 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-11 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-11 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 2e-11 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-11 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 2e-11 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 3e-11 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-11 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 3e-11 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 3e-11 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-11 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 3e-11 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 3e-11 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 3e-11 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 3e-11 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 4e-11 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 4e-11 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 4e-11 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-11 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-11 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 5e-11 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 5e-11 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 6e-11 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 6e-11 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 7e-11 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 8e-11 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 8e-11 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 8e-11 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 1e-10 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 1e-10 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 1e-10 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 1e-10 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 1e-10 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-10 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 1e-10 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-10 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-10 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 2e-10 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 2e-10 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-10 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-10 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-10 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 2e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 2e-10 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 2e-10 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 2e-10 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 2e-10 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 2e-10 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-10 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-10 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-10 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 3e-10 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 3e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-10 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 3e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-10 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 3e-10 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 3e-10 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 3e-10 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 3e-10 | ||
| 3ekj_A | 449 | Calcium-Free Gcamp2 (Calcium Binding Deficient Muta | 3e-10 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 3e-10 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-10 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 4e-10 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 4e-10 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-10 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 4e-10 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-10 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 4e-10 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 5e-10 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 5e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-10 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 6e-10 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 7e-10 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 7e-10 | ||
| 1j7o_A | 76 | Solution Structure Of Calcium-calmodulin N-terminal | 7e-10 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 8e-10 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 9e-10 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 9e-10 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 9e-10 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-09 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-09 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-09 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 1e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-09 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-09 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-09 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-09 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-09 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-09 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-09 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-09 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-09 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-09 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-09 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-09 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-09 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 2e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-09 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-09 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 3e-09 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 3e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 3e-09 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-09 | ||
| 1sw8_A | 79 | Solution Structure Of The N-Terminal Domain Of Huma | 3e-09 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 3e-09 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 3e-09 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-09 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 4e-09 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 5e-09 | ||
| 1f54_A | 77 | Solution Structure Of The Apo N-Terminal Domain Of | 5e-09 | ||
| 2i08_A | 78 | Solvation Effect In Conformational Changes Of Ef-Ha | 5e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 5e-09 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 6e-09 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 6e-09 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-09 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-09 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 6e-09 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 6e-09 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 7e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 7e-09 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 7e-09 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 7e-09 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 8e-09 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 8e-09 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 9e-09 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 9e-09 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 1e-08 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 1e-08 | ||
| 2ro8_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-08 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-08 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 1e-08 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-08 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-08 | ||
| 2ksz_A | 76 | The Solution Structure Of The Magnesium Bound Soybe | 1e-08 |
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77 | Back alignment and structure |
|
| >pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand Proteins: X-Ray Structure Of Ca2+-Saturated Double Mutant Q41l-K75i Of N-Domain Of Calmodulin Length = 78 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean Calmod Isoform 4 N-Domain Length = 76 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 679 bits (1753), Expect = 0.0
Identities = 161/438 (36%), Positives = 231/438 (52%), Gaps = 22/438 (5%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
PG AT G + + Y R LG+G FG L K T Q+ A
Sbjct: 2 PGSMMDHLHATP------GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECA 55
Query: 97 CKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF 156
K IS R++ + D E + REVQ++ L H NI++L +ED+ L+ ++ GGELF
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 157 DRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
D II++ +SE AA + RQ+++ + Y H ++HRDLKPEN L S ++D+ ++ DFG
Sbjct: 115 DEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 174
Query: 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
LS F+ KD +G+AYY+APEVL Y + D+WS GVILYILLSG PPF G E
Sbjct: 175 LSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYD 234
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV---DGDA 333
I + +G F W +S SAKD+++KML P R+SA + L+H W++ + +
Sbjct: 235 ILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 294
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTITF 392
D P + ++QF+ KL + AL + L S++E L +F MD + G +
Sbjct: 295 VDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDR 354
Query: 393 EELKAGLPK-----------LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441
EL G + L E EV Q+++A D D NG I+Y EF+T M +
Sbjct: 355 AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
Query: 442 EREEHLYKAFEYFDKDNS 459
E L +AF FD DNS
Sbjct: 415 LSRERLERAFRMFDSDNS 432
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
L+ F+ D+DNSG I+ EL + + ++ D + +G +D+ EF
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQM 477
Query: 435 TMH 437
+
Sbjct: 478 -LL 479
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 676 bits (1745), Expect = 0.0
Identities = 142/446 (31%), Positives = 223/446 (50%), Gaps = 23/446 (5%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
+ + + G + K + +Y R+LG G +G L K+ +
Sbjct: 5 HHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK 64
Query: 96 ACKSISSRKLIN----------RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145
A K I + E++ E+ ++ L H NI++L +ED+ L
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKKYFYL 123
Query: 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205
+ + GGELF++II + + E AAN+ +Q+++ + Y H ++HRD+KPEN L +
Sbjct: 124 VTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN 183
Query: 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSG 265
+K DFGLS FF +D +G+AYY+APEVL++ Y + D+WS GVI+YILL G
Sbjct: 184 SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
Query: 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PPF G+ +Q I + +G F + W NIS AK+++K ML D +R +A E LN
Sbjct: 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303
Query: 326 WMR---VDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSE-EEIMGLKEMFKS 381
W++ + + SD+ L+ M++F KL + A+ I L+ EE L ++FK
Sbjct: 304 WIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKK 363
Query: 382 MDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFIT 433
+D + G + +EL G L + E EV +++ D D NG I+Y EFI+
Sbjct: 364 LDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFIS 423
Query: 434 ATMHMNRVEREEHLYKAFEYFDKDNS 459
M + EE L +AF FD D S
Sbjct: 424 VCMDKQILFSEERLRRAFNLFDTDKS 449
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-09
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
L+ F DTD SG IT EEL +SE ++ AD + + ID+ EF++
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFGLTS--ISEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 435 TMH 437
MH
Sbjct: 495 -MH 496
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 672 bits (1735), Expect = 0.0
Identities = 153/416 (36%), Positives = 225/416 (54%), Gaps = 21/416 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
Y LG+G FG + T+Q++A K I+ N+D + REV+++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLK 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NI++L ED S ++ +L GGELFD II + +SE AA + +Q+ + +
Sbjct: 77 KL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y H ++HRDLKPEN L S +D +K DFGLS F+ KD +G+AYY+APEVL
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
R Y + D+WSAGVILYILLSG PPF+G+ E I + G F W IS AKD
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMR----VDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
+++KML P R++A + L HPW++ SD P + +T ++QF+A KL +
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQA 315
Query: 359 ALKVIAENLSE-EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL--------------G 403
AL +A L+ +E L E+F+ +DT+N G + +EL G +
Sbjct: 316 ALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNE 375
Query: 404 TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
E ++ LM D+DG+G+I+Y EFI + + + E + +AF+ FDKD S
Sbjct: 376 GSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGS 431
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 5e-11
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
++ FK D D SG I+ +EL + + + E+ ++E D + +G +D+ EF+
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 435 TMH 437
+
Sbjct: 479 -LQ 480
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 670 bits (1730), Expect = 0.0
Identities = 151/436 (34%), Positives = 232/436 (53%), Gaps = 15/436 (3%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
R + ++ G + + Y ++LG G +G L K T + A
Sbjct: 7 HSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERA 66
Query: 97 CKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF 156
K I + + + EV ++ L H NI++L +ED+ + L+M+ GGELF
Sbjct: 67 IKIIRKTSVSTSSN-SKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 157 DRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
D II + ++E AA + +Q+++ V Y H ++HRDLKPEN L S +D+ +K DFG
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG 184
Query: 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
LS F+ K+ +G+AYY+APEVLR+ Y + D+WS GVIL+ILL+G PPF G+T+Q
Sbjct: 185 LSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS-- 334
I + +G F S W N+S AKD++K+ML D + R+SA + L HPW++
Sbjct: 245 ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKES 304
Query: 335 --DKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTIT 391
+ P + M++F+ KL + AL +A L S+EE L ++F+ +D + G +
Sbjct: 305 GIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLD 364
Query: 392 FEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443
+EL G KL ESEV ++ AAD D NG IDY EF+T M +
Sbjct: 365 RQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 424
Query: 444 EEHLYKAFEYFDKDNS 459
++ L AF+ FD+D +
Sbjct: 425 KDKLESAFQKFDQDGN 440
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 615 bits (1589), Expect = 0.0
Identities = 122/404 (30%), Positives = 196/404 (48%), Gaps = 17/404 (4%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
Y ELG+G F V Q++A I+++KL + D + + RE +I
Sbjct: 5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARI 63
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
L H NIV L + + LI DL GGELF+ I+A+ +YSE A++ +Q++
Sbjct: 64 CRLL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAP 239
V +CH MGV+HR+LKPEN L +S + + +K DFGL++ + + G+ Y++P
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 182
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVLR++ YG D+W+ GVILYILL G PPFW E + ++ I G DF S W ++
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
AKD++ KML +P +R++AAE L HPW+ + + +K+F A KLK
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGA 302
Query: 359 ALKVIAEN--LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
L V+ S + +K + ++ ++G + T++ + +
Sbjct: 303 ILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDF----------ESYTKMCDPGMTAFEP 352
Query: 417 AADVDGNGTIDYIEFITATM-HMNRVEREEHLYKAFEYFDKDNS 459
A + +D+ F + N + + D S
Sbjct: 353 EALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDES 396
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 565 bits (1459), Expect = 0.0
Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 6/359 (1%)
Query: 40 PRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKS 99
P +S + + Y ELG+G F V HK T +FA K
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 100 ISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI 159
I+++KL RD + + RE +I L H NIV L + ++ L+ DL GGELF+ I
Sbjct: 62 INTKKLSARD-FQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119
Query: 160 IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+A+ YSE A++ +Q++ + YCHS G++HR+LKPEN L +S A+ + +K DFGL++
Sbjct: 120 VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Query: 220 FFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIF 278
+ + G+ Y++PEVL+++ Y DIW+ GVILYILL G PPFW E + ++
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
Query: 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
I G D+ S W ++ AK ++ ML +PK+R++A + L PW+ +
Sbjct: 240 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 299
Query: 339 DIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
+ +K+F A KLK L + + L + + E ++
Sbjct: 300 RQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNKKEQGPPSTIKESSES 355
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 559 bits (1442), Expect = 0.0
Identities = 111/352 (31%), Positives = 181/352 (51%), Gaps = 12/352 (3%)
Query: 46 ATSATSSSVGRVLGKPMEDV--RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR 103
+ S G +L +DV + Y +G+G F V +++T QQFA K +
Sbjct: 1 GSPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA 60
Query: 104 KLINRD--DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
K + ED++RE I H L H +IVEL Y + ++ + G +L I+
Sbjct: 61 KFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK 119
Query: 162 KGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
+ YSE A++ RQ++ + YCH ++HRD+KP L +S +P+K FG+
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179
Query: 218 SV-FFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQ 275
++ + G V VG+ +++APEV++R YG D+W GVIL+ILLSG PF+G T++
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKE 238
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
+F+ I++G + W +IS SAKD+V++ML DP ER++ E LNHPW++ +
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNS 387
K + ++++F A KLK L ++ + E D +
Sbjct: 299 KIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPT 350
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 534 bits (1377), Expect = 0.0
Identities = 122/340 (35%), Positives = 189/340 (55%), Gaps = 10/340 (2%)
Query: 29 PNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTH 88
L S++ +A+ + G + + + + ELGRG + Y
Sbjct: 15 TENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQ 74
Query: 89 KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148
K T++ +A K + D + VR E+ ++ L+ H NI++LK +E ++L+++
Sbjct: 75 KGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLE 128
Query: 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208
L GGELFDRI+ KG+YSER AA+ +Q++ V Y H G++HRDLKPEN L+++ A D+
Sbjct: 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA 188
Query: 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVP 267
PLK DFGLS + + K + G+ Y APE+LR YG E D+WS G+I YILL G
Sbjct: 189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Query: 268 PFWGET-EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
PF+ E +Q +F IL F S W +S +AKD+V+K++ DPK+RL+ + L HPW
Sbjct: 249 PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
Query: 327 MRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAEN 366
+ G A++ ++++F A KLK V+A +
Sbjct: 309 VT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 530 bits (1368), Expect = 0.0
Identities = 115/329 (34%), Positives = 175/329 (53%), Gaps = 16/329 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQ 119
E+V + Y G ELG GQF V K T Q+A K I R+ + ED+ REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y HS+ + H DLKPEN + + +K DFGL+ G+ FK++ G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q + + +F + + N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
+ AKD ++++L DPK+R++ + L HPW++ L+R M K KK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ-------QALSRKASAVNMEKFKK 298
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDN 386
A + + N S GL ++F++ +
Sbjct: 299 FAARKKSNNGSGG---GLNDIFEAQKIEW 324
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 531 bits (1369), Expect = 0.0
Identities = 106/406 (26%), Positives = 178/406 (43%), Gaps = 23/406 (5%)
Query: 7 LPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR 66
L +SQ Q P P PP P P + K +
Sbjct: 2 LSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIID 61
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + + LG G G + +K T+++FA K + D RREV++ +
Sbjct: 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQ 113
Query: 127 HRNIVELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTV 180
+IV + YE+ R + ++M+ GGELF RI +G ++ER A+ + + +
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ Y HS+ + HRD+KPEN L++S ++ LK TDFG + + + YYVAPE
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 241 VL-RRNYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILRGHIDFSSDPWPN 295
VL Y D+WS GVI+YILL G PPF+ + I G +F + W
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKL 355
+S K +++ +L +P +R++ E +NHPW+ PL + + + + R +
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVK 353
Query: 356 KKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
+++ + + E+I ++ K D N + + L
Sbjct: 354 EEMTSALATMRVDYEQI----KIKKIEDASNPLLLKRRKKARALEA 395
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 512 bits (1321), Expect = 0.0
Identities = 85/317 (26%), Positives = 159/317 (50%), Gaps = 6/317 (1%)
Query: 48 SATSSSVGRVLGKPMEDVRNTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI 106
S + + ME+ N Y + +ELGRG+F V K T Q++A K + R+
Sbjct: 9 SGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR- 67
Query: 107 NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GH 164
+D ++ E+ ++ ++ L YE+ + LI++ AGGE+F + +
Sbjct: 68 GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM 127
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
SE L +Q++ V+Y H ++H DLKP+N L SS +K DFG+S
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187
Query: 225 DVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR 283
++++G+ Y+APE+L + D+W+ G+I Y+LL+ PF GE Q + I +
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR-VDGDASDKPLDIAV 342
++D+S + + ++S A D ++ +L +P++R +A L+H W++ D + P + +
Sbjct: 248 VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSS 307
Query: 343 LTRMKQFRAMNKLKKVA 359
++ + + K +
Sbjct: 308 SSQTQDHSVRSSEDKTS 324
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 510 bits (1315), Expect = 0.0
Identities = 106/343 (30%), Positives = 169/343 (49%), Gaps = 20/343 (5%)
Query: 51 SSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD 110
S+ + L + + Y ++G G + V HK T +FA K I K
Sbjct: 6 VHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK------ 59
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
D E++I+ H NI+ LK Y+D V ++ +L GGEL D+I+ + +SER A
Sbjct: 60 -RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA 118
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED-SPLKATDFGLSVFFKPGD-VFK 228
+ + + V Y H+ GV+HRDLKP N L+ + + ++ DFG + + + +
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 229 DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRG 284
+A +VAPEVL R Y A DIWS GV+LY +L+G PF +T + I I G
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG 238
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLT 344
S W ++S +AKD+V KMLH DP +RL+AA VL HPW+ L+
Sbjct: 239 KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298
Query: 345 RMKQ------FRAMNKLKKVALKVIAENLSEEEIMGLKEMFKS 381
+ + + A+N+ + L+ + + + G+K++ +
Sbjct: 299 HLVKGAMAATYSALNRNQSPVLEPVGRSTLAQR-RGIKKITST 340
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 508 bits (1311), Expect = e-180
Identities = 110/346 (31%), Positives = 170/346 (49%), Gaps = 10/346 (2%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD---DVEDVRREVQ 119
+ V + Y G ELG GQF + K T ++A K I R+ E++ REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H NI+ L YE+R V LI++L +GGELFD + K SE A + +Q++
Sbjct: 68 ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q I DF + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG--DASDKPLDIAVLTRMKQFRAMNKL 355
AKD ++K+L + ++RL+ E L HPW+ A + + L K+ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRW 306
Query: 356 KK-VALKVIAENLSEEEIMGLK-EMFKSMDTDNSGTITFEELKAGL 399
K ++ + +L+ + + + + S T + L
Sbjct: 307 KLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKAL 352
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 505 bits (1302), Expect = e-180
Identities = 108/280 (38%), Positives = 163/280 (58%), Gaps = 4/280 (1%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G D+ Y +GRG +G + K T+ + A K I + +DV+ ++E+
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 57
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+IM L H NI+ L +ED + L+M+LC GGELF+R++ K + E AA + + ++
Sbjct: 58 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ V YCH + V HRDLKPENFLF + + DSPLK DFGL+ FKPG + + VG+ YYV+
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 239 PEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
P+VL YG E D WSAGV++Y+LL G PPF T+ + I G F W N+S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP 236
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
A+ +++++L PK+R+++ + L H W +S + L
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 506 bits (1306), Expect = e-180
Identities = 86/318 (27%), Positives = 158/318 (49%), Gaps = 12/318 (3%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+++ Y+ +LGRG+FG+ + +K+ + K + + D V++E+ I++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILN 56
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVV 181
HRNI+ L ++E + +I + +G ++F+RI +ER + Q+ +
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ HS + H D++PEN ++ + S +K +FG + KPGD F+ L + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ + D+WS G ++Y+LLSG+ PF ET Q I + I+ F + + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
D V ++L + K R++A+E L HPW++ + + V+ +K R + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLK----QKIERVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 361 KVIAENLSEEEIMGLKEM 378
++ ++
Sbjct: 291 NMVVSAARISCGGAIRSQ 308
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 502 bits (1296), Expect = e-179
Identities = 107/324 (33%), Positives = 159/324 (49%), Gaps = 25/324 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
P + + + LG G F + HK + Q FA K IS R + ++E+
Sbjct: 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEIT 57
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+ GH NIV+L + D+ L+M+L GGELF+RI K H+SE A+ + R++V+
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS 117
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLVGSAYYVA 238
V + H +GV+HRDLKPEN LF+ ++ +K DFG + P K + +Y A
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQS-------IFDAILRGHIDFSS 290
PE+L +N Y D+WS GVILY +LSG PF I I +G F
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG 237
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL---------DIA 341
+ W N+S AKD+++ +L DP +RL + + + W++ S PL A
Sbjct: 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAA 297
Query: 342 VLTRMK-QFRAMNKLKKVALKVIA 364
V T +K F A NK K+ +
Sbjct: 298 VHTCVKATFHAFNKYKREGFCLQN 321
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 492 bits (1269), Expect = e-175
Identities = 109/266 (40%), Positives = 153/266 (57%), Gaps = 2/266 (0%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
Y LG+G FG + T+Q++A K I+ N+D + REV+++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLK 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NI++L ED S ++ +L GGELFD II + +SE AA + +Q+ + +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y H ++HRDLKPEN L S +D +K DFGLS F+ KD +G+AYY+APEVL
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
R Y + D+WSAGVILYILLSG PPF+G+ E I + G F W IS AKD
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMR 328
+++KML P R++A + L HPW++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQ 281
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 493 bits (1271), Expect = e-175
Identities = 104/309 (33%), Positives = 162/309 (52%), Gaps = 9/309 (2%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQ 119
+ V + Y G ELG GQF + K T ++A K I R+ E++ REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q I DF + + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR--VDGDASDKPLDIAVLTRMKQFRAMNKL 355
AKD ++K+L + ++RL+ E L HPW+ + A + + L ++ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRW 306
Query: 356 KKVALKVIA 364
K + +++
Sbjct: 307 KL-SFSIVS 314
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 493 bits (1271), Expect = e-174
Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 15/331 (4%)
Query: 9 SSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNT 68
+ + S DP K++ P + + ++
Sbjct: 36 QRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQK 95
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----RDDVEDVRREVQIMHH 123
Y +GRG V H+ T +FA K + + E RRE I+
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ GH +I+ L +YE + L+ DL GELFD + K SE+ ++ R ++ V +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H+ ++HRDLKPEN L ++ ++ +DFG S +PG+ ++L G+ Y+APE+L+
Sbjct: 216 LHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 244 -------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
YG E D+W+ GVIL+ LL+G PPFW + + I+ G FSS W +
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
SS+ KD++ ++L DP+ RL+A + L HP+
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 489 bits (1261), Expect = e-174
Identities = 102/275 (37%), Positives = 157/275 (57%), Gaps = 3/275 (1%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ Y ELG+G F V HK T +FA K I+++KL RD + + RE +I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICR 60
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NIV L + ++ L+ DL GGELF+ I+A+ YSE A++ +Q++ +
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
YCHS G++HR+LKPEN L +S A+ + +K DFGL++ + + G+ Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 243 RRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+++ Y DIW+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
++ ML +PK+R++A + L PW+ +
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 483 bits (1247), Expect = e-172
Identities = 103/283 (36%), Positives = 157/283 (55%), Gaps = 6/283 (2%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD---DVEDVRREVQI 120
V + Y G ELG GQF + K T +++A K I R+L + E++ REV I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
+ + H NI+ L +E++ V LI++L +GGELFD + K +E A +Q++
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
VHY HS + H DLKPEN + + + +K DFG++ + G+ FK++ G+ +VAP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
E++ G EAD+WS GVI YILLSG PF GET+Q I + DF + + N S
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
AKD ++++L DPK R++ A+ L H W++ + + D
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSG 283
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-171
Identities = 106/319 (33%), Positives = 154/319 (48%), Gaps = 18/319 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRRE 117
+ +R+ YI + LG G G L + T ++ A K IS RK D +V E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
++I+ L H I+++K ++ ++++L GGELFD+++ E QM
Sbjct: 66 IEILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 183
Query: 238 APEVL----RRNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDP 292
APEVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F +
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352
W +S A D+VKK+L DPK R + E L HPW++ D+ + + +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ------DEDMKRKFQDLLSEENES 297
Query: 353 NKLKKVALKVIAENLSEEE 371
L +V + E
Sbjct: 298 TALPQVLAQPSTSRKRPRE 316
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 484 bits (1249), Expect = e-171
Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 28/369 (7%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLV 86
K D P V + + V + Y ELG G FGV +
Sbjct: 11 GSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRC 70
Query: 87 THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146
K T + F K I++ + D V+ E+ IM+ L H ++ L A+ED++ + LI
Sbjct: 71 VEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLI 126
Query: 147 MDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205
++ +GGELFDRI A+ + SE N RQ + + H ++H D+KPEN + +
Sbjct: 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK- 185
Query: 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
+ S +K DFGL+ P ++ K +A + APE++ R G D+W+ GV+ Y+LLS
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 245
Query: 265 GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
G+ PF GE + + R +F D + ++S AKD +K +L +P++RL+ + L H
Sbjct: 246 GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 325 PWMRVDGDASDKPLD---------------------IAVLTRMKQFRAMNKLKKVALKVI 363
PW++ D + + R+ F ++ K + ++
Sbjct: 306 PWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIY 365
Query: 364 AENLSEEEI 372
+E
Sbjct: 366 DSYFDRKEA 374
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-170
Identities = 98/280 (35%), Positives = 163/280 (58%), Gaps = 8/280 (2%)
Query: 53 SVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE 112
S GR + + +IF R+LG G FG +LV + + + K+I+ + + +E
Sbjct: 8 SSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPME 65
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----GHYSER 168
+ E++++ L H NI+++ +ED H++ ++M+ C GGEL +RI++ SE
Sbjct: 66 QIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
A L +QM+ + Y HS V+H+DLKPEN LF ++ SP+K DFGL+ FK +
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST 184
Query: 229 DLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288
+ G+A Y+APEV +R+ + DIWSAGV++Y LL+G PF G + + + ++
Sbjct: 185 NAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY 244
Query: 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + P ++ A D++K+ML DP+ R SAA+VL+H W +
Sbjct: 245 AVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-170
Identities = 95/292 (32%), Positives = 144/292 (49%), Gaps = 16/292 (5%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN------RDDVE 112
Y LGRG V HK T +++A K I + ++ E
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN 172
+EV I+ ++GH NI++LK YE L+ DL GELFD + K SE+
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+ R ++ V+ H + ++HRDLKPEN L +D +K TDFG S PG+ +++ G
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 233 SAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
+ Y+APE++ YG E D+WS GVI+Y LL+G PPFW + + I+ G+
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
F S W + S + KD+V + L P++R +A E L HP+ + +
Sbjct: 246 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVRH 297
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 488 bits (1259), Expect = e-169
Identities = 109/410 (26%), Positives = 171/410 (41%), Gaps = 15/410 (3%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVG--RVLGKPMEDV 65
P++ + G G + G + + + + V
Sbjct: 96 PTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHV 155
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ Y ELG G FGV + VT + T FA K + + D E VR+E+Q M L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLR 212
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYC 184
H +V L A+ED + + +I + +GGELF+++ + SE A RQ+ + +
Sbjct: 213 -HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR- 243
H +H DLKPEN +F++ + LK DFGL+ P K G+A + APEV
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ G D+WS GV+ YILLSG+ PF GE + + + + IS KD
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRV-DGDASDKPLDIAVLTRMKQFRAMNKLKKVALKV 362
++K+L ADP R++ + L HPW+ + D + + R + R K K
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSS---RYTKIRDSIKTKY--DAW 445
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
I + K + S F + P+ + +EV
Sbjct: 446 PEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVG 495
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 475 bits (1224), Expect = e-168
Identities = 101/313 (32%), Positives = 151/313 (48%), Gaps = 36/313 (11%)
Query: 64 DVRNTYIFGRE-LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ Y + LG G + T Q++A K I + V REV++++
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLY 65
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
GHRN++EL +E+ L+ + GG + I + H++E A+ + + + + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD 125
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL--------VGSA 234
+ H+ G+ HRDLKPEN L + SP+K DF L K + GSA
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 235 YYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGE---------------T 273
Y+APEV+ Y D+WS GVILYILLSG PPF G
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333
+ +F++I G +F W +IS +AKD++ K+L D K+RLSAA+VL HPW++ G A
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCA 303
Query: 334 SDKPLDIA-VLTR 345
+ L VL R
Sbjct: 304 PENTLPTPMVLQR 316
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 474 bits (1222), Expect = e-167
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 25/339 (7%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRE-LGRGQFGVTYLVTHKDTKQQFACKSISSRKLI 106
S+ + + V + Y ++ LG G G H+ T Q+ A K +
Sbjct: 9 SSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL------ 62
Query: 107 NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH----SVNLIMDLCAGGELFDRIIAK 162
D R+EV +G +IV + YE+ H + +IM+ GGELF RI +
Sbjct: 63 --YDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER 120
Query: 163 GH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220
G ++ER AA + R + T + + HS + HRD+KPEN L++S +D+ LK TDFG +
Sbjct: 121 GDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180
Query: 221 FKPGDVFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ---- 275
+ + YYVAPEVL Y D+WS GVI+YILL G PPF+ T Q
Sbjct: 181 TTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 239
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
+ I G F + W +S AK +++ +L DP ERL+ + +NHPW+
Sbjct: 240 GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 299
Query: 336 KPLDIA-VLTRMKQFRAMNKLKKVALKVIAEN-LSEEEI 372
PL A VL K +++K+ +A + +++
Sbjct: 300 TPLHTARVLQEDKDH--WDEVKEEMTSALATMRVDYDQV 336
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 464 bits (1197), Expect = e-163
Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 25/356 (7%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRN 67
+ + ++ + + L +D P PP P R++ V +
Sbjct: 38 EAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDH----------RIVTAKQGAVNS 87
Query: 68 TYIFGR--ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
Y + LG G+FG + T + A K I +R + D E+V+ E+ +M+ L
Sbjct: 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQL- 143
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYC 184
H N+++L A+E ++ + L+M+ GGELFDRII + + +E +Q+ + +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H M ++H DLKPEN L + + +K DFGL+ +KP + K G+ ++APEV+
Sbjct: 204 HQMYILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ D+WS GVI Y+LLSG+ PF G+ + + IL D + + +IS AK+
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVA 359
+ K+L + R+SA+E L HPW+ SD L + + K+ R + V
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWL------SDHKLHSRLSAQKKKNRGSDAQDFVT 372
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 459 bits (1183), Expect = e-162
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 39/315 (12%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K + + + + LG G G + +K T+++FA K + D RREV+
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 62
Query: 120 IMHHLTGHRNIVELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANL 173
+ + +IV + YE+ R + ++M+ GGELF RI +G ++ER A+ +
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
+ + + Y HS+ + HRD+KPEN L++S ++ LK TDFG
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---------------- 166
Query: 234 AYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILRGHIDFS 289
A E Y D+WS GVI+YILL G PPF+ + I G +F
Sbjct: 167 ----AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 222
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQF 349
+ W +S K +++ +L +P +R++ E +NHPW+ PL + + + +
Sbjct: 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 282
Query: 350 RAMNKLKKVALKVIA 364
R +K+ +A
Sbjct: 283 R-WEDVKEEMTSALA 296
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 441 bits (1135), Expect = e-153
Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 13/288 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRRE 117
+ +R+ YI + LG G G L + T ++ A + IS RK D +V E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
++I+ L H I+++K ++ ++++L GGELFD+++ E QM
Sbjct: 191 IEILKKLN-HPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308
Query: 238 APEVL----RRNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDP 292
APEVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F +
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
W +S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 415
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 436 bits (1124), Expect = e-152
Identities = 98/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-- 105
++ G + +++ Y +G+G +GV + T+ A K ++ K+
Sbjct: 7 HSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ 66
Query: 106 INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH- 164
IN DVE ++ EV++M L H NI L YED + L+M+LC GG L D++
Sbjct: 67 INPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125
Query: 165 ---------------------------------------YSERAAANLCRQMVTVVHYCH 185
E+ +N+ RQ+ + +HY H
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPE 240
+ G+ HRD+KPENFLFS++ + +K DFGLS F + G+ Y+VAPE
Sbjct: 186 NQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244
Query: 241 VLR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
VL +YG + D WSAGV+L++LL G PF G + +L + F + + +S
Sbjct: 245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLS 304
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
A+D++ +L+ + ER A L HPW+ D K
Sbjct: 305 PLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYK 343
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 325 bits (835), Expect = e-107
Identities = 85/437 (19%), Positives = 155/437 (35%), Gaps = 38/437 (8%)
Query: 41 RPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI 100
PS + ++GK ++ LG G G + A K I
Sbjct: 4 SPSLEQDDGDEETSVVIVGK------ISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRI 56
Query: 101 SSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII 160
+ REVQ++ H N++ +DR + ++LC L + +
Sbjct: 57 ------LPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE 109
Query: 161 AKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGL 217
K + L +Q + + + HS+ ++HRDLKP N L S +KA +DFGL
Sbjct: 110 QKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
Query: 218 SVFFKPGD----VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLS-GVPP 268
G + G+ ++APE+L N DI+SAG + Y ++S G P
Sbjct: 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
F ++ + +D P + A+++++KM+ DP++R SA VL HP+
Sbjct: 230 FGKSLQRQANILLGACSLDCLH-PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288
Query: 329 VDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSG 388
V R+++ + K + + + + ++ D
Sbjct: 289 --SLEKQLQFFQDVSDRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQT-DLRKFR 345
Query: 389 TITFEELKAGLPKL--GTRLSESEVRQLMEAADVDGNGTIDYIE--FITATMHMNRVER- 443
T ++ L + ++ E + + Y F H R
Sbjct: 346 TYKGGSVRDLLRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMEL 405
Query: 444 ---EEHLYKAFEYFDKD 457
E + + +
Sbjct: 406 CSHERLFQPYYFHEPPE 422
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 320 bits (822), Expect = e-105
Identities = 75/342 (21%), Positives = 135/342 (39%), Gaps = 48/342 (14%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ ++N + + LG G G + A K + D + E++++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVF-QGSFQGRPVAVKRM------LIDFCDIALMEIKLLT 63
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------AANLCR 175
H N++ + + + ++LC L D + +K E +L R
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AEDSPLKATDFGLSVFFKPGD 225
Q+ + V + HS+ ++HRDLKP+N L S+S AE+ + +DFGL G
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 226 V-----FKDLVGSAYYVAPEVLR--------RNYGAEADIWSAGVILYILLS-GVPPFWG 271
+ G++ + APE+L R DI+S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 272 ETEQSIFDAILRGHIDFS---SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + I+RG ++ + A D++ +M+ DP +R +A +VL HP
Sbjct: 243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300
Query: 329 VDGDASDKPLDIA----VLTRMKQFRAMNKLKKVALKVIAEN 366
+ L ++ + R + K + VI
Sbjct: 301 PKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSG 342
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 288 bits (740), Expect = 1e-94
Identities = 93/309 (30%), Positives = 143/309 (46%), Gaps = 13/309 (4%)
Query: 24 GPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVT 83
GP + K PG P + A + + + VL P R Y+ GR LG+G F
Sbjct: 1 GP-APADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRS--RRRYVRGRFLGKGGFAKC 57
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143
+ ++ DTK+ FA K + L+ E + E+ I L H+++V G +ED V
Sbjct: 58 FEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFV 116
Query: 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203
++++LC L + + +E A RQ+V Y H V+HRDLK N +
Sbjct: 117 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 176
Query: 204 SAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYI 261
E +K DFGL+ + K L G+ Y+APEVL + + E D+WS G I+Y
Sbjct: 177 DLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233
Query: 262 LLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
LL G PPF + + I + ++S I+ A +++KML DP R + E+
Sbjct: 234 LLVGKPPFETSCLKETYLRIKKN--EYSIPKH--INPVAASLIQKMLQTDPTARPTINEL 289
Query: 322 LNHPWMRVD 330
LN +
Sbjct: 290 LNDEFFTSG 298
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 2e-94
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 41/295 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ + LG+G FG + + +A K I + + + + EV ++ L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLN 60
Query: 126 GHRNIVELKGAYEDRHSVN-------------LIMDLCAGGELFDRIIAKGHYSER-AAA 171
H+ +V A+ +R + + M+ C G L+D I ++ +R
Sbjct: 61 -HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------- 222
L RQ++ + Y HS G++HRDLKP N E +K DFGL+
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 223 ------PGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE 274
D +G+A YVA EVL +Y + D++S G+I + ++ P G
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMER 234
Query: 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+I + I+F D N K I++ ++ DP +R A +LN W+ V
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 286 bits (733), Expect = 7e-94
Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 43/299 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
++ LG+G + HK T FA K ++ V+ RE +++ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HK 67
Query: 129 NIVELKGAYEDRHSVN--LIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHY 183
NIV+L E+ + + LIM+ C G L+ + + E + R +V +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 184 CHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
G++HR++KP N + S K TDFG + + + F L G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 243 RR---------NYGAEADIWSAGVILYILLSGVPPFW----GETEQSIFDAILRG----- 284
R YGA D+WS GV Y +G PF + + I+ G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 285 ----------HIDFSSD--PWPNISSSAKDIVK----KMLHADPKERLSAAEVLNHPWM 327
ID+S D ++S + ++ +L AD ++ +
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 5e-92
Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 10/264 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ GR LG+G F + ++ DTK+ FA K + L+ E + E+ I L H+
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQ 75
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++V G +ED V ++++LC L + + +E A RQ+V Y H
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-Y 246
V+HRDLK N + E +K DFGL+ + K L G+ Y+APEVL + +
Sbjct: 136 VIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
E D+WS G I+Y LL G PPF + + I + P +I+ A +++K
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI---P-KHINPVAASLIQK 248
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML DP R + E+LN +
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSG 272
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 7e-92
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 19/283 (6%)
Query: 49 ATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR 108
+ ++ +G + + G LG+G F Y T + A K I + +
Sbjct: 1 SLATCIGEKIED--------FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKA 52
Query: 109 DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SE 167
V+ V+ EV+I L H +I+EL +ED + V L++++C GE+ + + SE
Sbjct: 53 GMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE 111
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A + Q++T + Y HS G++HRDL N L + + +K DFGL+ K
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEK 168
Query: 228 KD-LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
L G+ Y++PE+ R+ +G E+D+WS G + Y LL G PPF +T ++ + ++
Sbjct: 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD 228
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ P +S AKD++ ++L +P +RLS + VL+HP+M
Sbjct: 229 YEM---P-SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 275 bits (705), Expect = 4e-90
Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ GR LG+G+FG YL K K A K + +L +RRE++I HL H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ + + DR + L+++ GEL+ + G + E+ +A ++ +HYCH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
V+HRD+KPEN L E LK DFG SV P + + G+ Y+ PE++ + +
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRTMCGTLDYLPPEMIEGKTHD 190
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+ D+W AGV+ Y L G+PPF + I+ + F P P +S +KD++ K+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF---P-PFLSDGSKDLISKL 246
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
L P +RL V+ HPW++ + P+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPVY 278
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 2e-89
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 32/328 (9%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
Y +++G G + V ++ KQ +A K ++ + + ++ R E+ ++ L
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN-LEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 127 H-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 67 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL 242
G++H DLKP NFL D LK DFG++ +P V VG+ Y+ PE +
Sbjct: 126 QHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 243 ------------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFS 289
+ ++D+WS G ILY + G PF Q S AI+ + +
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI- 240
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA------VL 343
+ +D++K L DPK+R+S E+L HP++++ ++ VL
Sbjct: 241 -EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVL 299
Query: 344 TRMKQFRAMNKLKKVALKVIAENLSEEE 371
++ + N + K A + E
Sbjct: 300 GQLVGLNSPNSILKAAKTLYEHYSGGES 327
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 2e-89
Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ GR LG+G+FG YL K +K A K + +L +RREV+I HL H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ L G + D V LI++ G ++ + + E+ A ++ + YCHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
V+HRD+KPEN L LK DFG SV P DL G+ Y+ PE++ R +
Sbjct: 130 VIHRDIKPENLLLG---SAGELKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+ D+WS GV+ Y L G PPF T Q + I R F P ++ A+D++ ++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P-DFVTEGARDLISRL 241
Query: 308 LHADPKERLSAAEVLNHPWMR 328
L +P +R EVL HPW+
Sbjct: 242 LKHNPSQRPMLREVLEHPWIT 262
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 272 bits (698), Expect = 1e-88
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 26/317 (8%)
Query: 43 SSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS 102
+S + + M Y +++G G + V ++ KQ +A K ++
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN- 61
Query: 103 RKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
+ + ++ R E+ ++ L H I+ L + ++M+ C +L +
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK 120
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
K + + M+ VH H G++H DLKP NFL D LK DFG++
Sbjct: 121 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQM 176
Query: 222 KPGD---VFKDLVGSAYYVAPEVL------------RRNYGAEADIWSAGVILYILLSGV 266
+P V VG+ Y+ PE + + ++D+WS G ILY + G
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 267 PPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PF Q S AI+ + + + +D++K L DPK+R+S E+L HP
Sbjct: 237 TPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294
Query: 326 WMRVDGDASDKPLDIAV 342
++++ ++
Sbjct: 295 YVQIQTHPVNQMAKGTT 311
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 3e-88
Identities = 48/300 (16%), Positives = 82/300 (27%), Gaps = 44/300 (14%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL--- 124
L G V +LV + + FA K + +R ++E + L
Sbjct: 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122
Query: 125 --------------------TGHRNIVELKGAYEDRHSVN--LIMDLCAG------GELF 156
+L +D N L+M + L
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182
Query: 157 DRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
+ +G A L Q++ + S G++H P+N D L D
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLGDVS 239
Query: 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGET 273
K G Y E L + + + W G+ +Y + PF T
Sbjct: 240 ALW--KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297
Query: 274 EQSIFDAIL-----RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
G + + K ++ + L+ D + RL E + P
Sbjct: 298 PGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 3e-88
Identities = 84/384 (21%), Positives = 152/384 (39%), Gaps = 39/384 (10%)
Query: 10 SQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTY 69
+ L + +D P S++++ V G+ Y
Sbjct: 6 HSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRI-------Y 58
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-R 128
+++G G + V ++ KQ +A K ++ + + ++ R E+ ++ L H
Sbjct: 59 SILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN-LEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+ L + ++M+ C +L + K + + M+ VH H G
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--DVFKD-LVGSAYYVAPEVL--- 242
++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE +
Sbjct: 176 IVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 243 ---------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDP 292
+ ++D+WS G ILY + G PF Q S AI+ + + +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI--EF 289
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA------VLTRM 346
+D++K L DPK+R+S E+L HP++++ ++ VL ++
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQL 349
Query: 347 KQFRAMNKLKKVALKVIAENLSEE 370
+ N + K A + E
Sbjct: 350 VGLNSPNSILKAAKTLYEHYSGGE 373
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 4e-88
Identities = 49/349 (14%), Positives = 99/349 (28%), Gaps = 67/349 (19%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR---------NTYIFGRELGRGQFGVT 83
+I S SA S V L + R T + G LG+
Sbjct: 30 RIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAY 89
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL------------------- 124
T ++T + F + + ++ ++ EV + L
Sbjct: 90 LEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149
Query: 125 -----TGHRNIVELKGAYEDRHSVN--LIMDLCA------GGELFDRIIAKGHYSERAAA 171
+ ++ ++ D ++ + G L A
Sbjct: 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 209
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ ++ H G++H L+P + + + + T F V
Sbjct: 210 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLV---RDGARVVSS 263
Query: 232 GSAYYVAPEVLRRN------------YGAEADIWSAGVILYILLSGVPPFWGETEQSIFD 279
S + PE+ R D W+ G+++Y + P + +
Sbjct: 264 VSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE 323
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
I R NI + +++ L ++RL + + P
Sbjct: 324 WIFRS--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 269 bits (689), Expect = 8e-88
Identities = 93/264 (35%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ G LG G FG + H+ T + A K ++ +K+ + D V ++RE+Q + H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HP 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L ++M+ +GGELFD I G E A L +Q+++ V YCH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
V+HRDLKPEN L K DFGLS G+ + GS Y APEV+ R Y
Sbjct: 132 VVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS GVILY LL G PF E ++F I G F + ++ S ++
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEY--LNRSVATLLMH 244
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML DP +R + ++ H W + D
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQD 268
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 8e-88
Identities = 70/322 (21%), Positives = 127/322 (39%), Gaps = 47/322 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
++ LG+G + HK T FA K ++ + V+ RE +++ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN-HK 67
Query: 129 NIVELKGAYEDRHSVN--LIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHY 183
NIV+L E+ + + LIM+ C G L+ + + E + R +V +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 184 CHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
G++HR++KP N + S K TDFG + + + F L G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 243 RRN---------YGAEADIWSAGVILYILLSGVPPFW----GETEQSIFDAILRG----- 284
R YGA D+WS GV Y +G PF + + I+ G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 285 ----------HIDFSSD--PWPNISSSAKDIVK----KMLHADPKERLSAAEVLNHPWMR 328
ID+S D ++S + ++ +L AD ++ +
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307
Query: 329 VDGDASDKPLDIAVLTRMKQFR 350
+ + + L +M +
Sbjct: 308 L----HRMVIHVFSLQQMTAHK 325
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 6e-87
Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 28/314 (8%)
Query: 47 TSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI 106
+ A+ + +G Y + +G+G F L H T ++ A K I + +
Sbjct: 3 SIASCADEQPHIGN--------YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-L 53
Query: 107 NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYS 166
N ++ + REV+IM L H NIV+L E ++ LIM+ +GGE+FD ++A G
Sbjct: 54 NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK 112
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
E+ A + RQ+V+ V YCH ++HRDLK EN L D +K DFG S F G
Sbjct: 113 EKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSNEFTVGGK 169
Query: 227 FKDLVGSAYYVAPEVLR-RNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
G+ Y APE+ + + Y G E D+WS GVILY L+SG PF G+ + + + +LRG
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 229
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD---------GDASD 335
+ + +S+ ++++K+ L +P +R + +++ W+ +
Sbjct: 230 --KYRIPFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPEL 285
Query: 336 KPLDIAVLTRMKQF 349
D + M
Sbjct: 286 DISDQKRIDIMVGM 299
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 266 bits (683), Expect = 7e-87
Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 14/275 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G +G L ++ T++ A K + ++ + D E++++E+ I L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 65
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
N+V+ G + + L ++ C+GGELFDRI E A Q++ V Y H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL-RR 244
+ HRD+KPEN L E LK +DFGL+ F+ + + L G+ YVAPE+L RR
Sbjct: 126 ITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 245 NY-GAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKD 302
+ D+WS G++L +L+G P+ ++ + +PW I S+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLA 240
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
++ K+L +P R++ ++ W K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 2e-86
Identities = 104/360 (28%), Positives = 159/360 (44%), Gaps = 25/360 (6%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN 107
+ G + M D Y F +++G G FGV L+ K TK+ A K I I+
Sbjct: 2 DRAPVTTGPLDMPIMHDSDR-YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID 60
Query: 108 RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSE 167
E+V+RE+ L H NIV K + +IM+ +GGEL++RI G +SE
Sbjct: 61 ----ENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE 115
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A +Q+++ V YCHSM + HRDLK EN L S LK DFG S
Sbjct: 116 DEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQP 174
Query: 228 KDLVGSAYYVAPEVL-RRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIF----DAI 281
K VG+ Y+APEVL R+ Y G AD+WS GV LY++L G PF E + I
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI 234
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD----------G 331
L D IS ++ ++ ADP R+S E+ H W +
Sbjct: 235 LSVKYSIPDDIR--ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNT 292
Query: 332 DASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391
+ + + + + + +++ A++ + + + L + D+++ I
Sbjct: 293 GSQFQEPEQPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDID 352
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 265 bits (680), Expect = 1e-85
Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 13/307 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI LG G FG L TH T+Q+ A K IS + L D V RE+ + L H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK-LLRHP 69
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + ++++ AGGELFD I+ K +E +Q++ + YCH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLKPEN L ++ +K DFGLS G+ K GS Y APEV+ + Y
Sbjct: 129 IVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS G++LY++L G PF E ++F + + + +S A+ ++++
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC--VYVMPDF--LSPGAQSLIRR 241
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTR--MKQFRAMNKLKKVALKVIA 364
M+ ADP +R++ E+ PW V+ +P++ + + + + + I
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIV 301
Query: 365 ENLSEEE 371
E L +E
Sbjct: 302 EALRSDE 308
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 264 bits (678), Expect = 2e-85
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 16/269 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G +G L ++ T++ A K + ++ + D E++++E+ I L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 65
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
N+V+ G + + L ++ C+GGELFDRI E A Q++ V Y H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL-RR 244
+ HRD+KPEN L E LK +DFGL+ F+ + + L G+ YVAPE+L RR
Sbjct: 126 ITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 245 NY-GAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ D+WS G++L +L+G P+ ++ Q D + +PW I S+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK---TYLNPWKKIDSAPL 239
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330
++ K+L +P R++ ++ W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKP 268
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 268 bits (686), Expect = 8e-85
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 19/329 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI G LG G FG + H+ T + A K ++ +K+ + D V +RRE+Q + H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HP 76
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + ++M+ +GGELFD I G E+ + L +Q+++ V YCH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
V+HRDLKPEN L K DFGLS G+ + GS Y APEV+ R Y
Sbjct: 137 VVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 193
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS+GVILY LL G PF + ++F I G F + + ++ S ++K
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQY--LNPSVISLLKH 249
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAEN 366
ML DP +R + ++ H W + D P D + + M A+ ++
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEV------CEKFE 303
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
SEEE++ + + + + + +
Sbjct: 304 CSEEEVL---SCLYNRNHQDPLAVAYHLI 329
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 263 bits (673), Expect = 9e-85
Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 20/300 (6%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PR S A + GK E + + Y G LG G FG Y
Sbjct: 12 SGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 71
Query: 96 ACKSISSRKLINRDDVED---VRREVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCA 151
A K + ++ + ++ + V EV ++ ++ G ++ L +E S LI++
Sbjct: 72 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 131
Query: 152 G-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210
+LFD I +G E A + Q++ V +CH+ GV+HRD+K EN L + + L
Sbjct: 132 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--L 189
Query: 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY-GAEADIWSAGVILYILLSGVPP 268
K DFG K V+ D G+ Y PE +R Y G A +WS G++LY ++ G P
Sbjct: 190 KLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
F + E I+RG + F +SS + +++ L P +R + E+ NHPWM+
Sbjct: 249 FEHDEE------IIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 262 bits (671), Expect = 1e-84
Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 22/306 (7%)
Query: 41 RPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI 100
+P + + GK E Y G LG+G FG + + Q A K I
Sbjct: 5 KPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI 64
Query: 101 SSRKLINRDDVED---VRREVQIM---HHLTGHRNIVELKGAYEDRHSVNLIMDL-CAGG 153
+++ + D EV ++ GH ++ L +E + L+++
Sbjct: 65 PRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQ 124
Query: 154 ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213
+LFD I KG E + Q+V + +CHS GV+HRD+K EN L K
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLI 182
Query: 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY-GAEADIWSAGVILYILLSGVPPFWG 271
DFG + D G+ Y PE + Y A +WS G++LY ++ G PF
Sbjct: 183 DFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
+ E IL + F ++S ++++ L P R S E+L PWM+
Sbjct: 242 DQE------ILEAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291
Query: 332 DASDKP 337
+
Sbjct: 292 EDVPLN 297
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 260 bits (667), Expect = 5e-84
Identities = 77/311 (24%), Positives = 119/311 (38%), Gaps = 17/311 (5%)
Query: 24 GPGHHPNGLKIDPPGPPRPSSSA----TSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQ 79
G L +P + S T S G +P + ++ LG G
Sbjct: 10 GVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGS 69
Query: 80 FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139
+G + V K+ + +A K S D EV + H V L+ A+E+
Sbjct: 70 YGEVFKVRSKEDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE 128
Query: 140 RHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198
+ L +LC G L A G E R + + + HS G++H D+KP N
Sbjct: 129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN 187
Query: 199 FLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVI 258
K DFGL V + G Y+APE+L+ +YG AD++S G+
Sbjct: 188 IFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLT 244
Query: 259 LYILLSGVP-PFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
+ + + P GE Q + L +SS + ++ ML DPK R +
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQGYLPPEF------TAGLSSELRSVLVMMLEPDPKLRAT 298
Query: 318 AAEVLNHPWMR 328
A +L P +R
Sbjct: 299 AEALLALPVLR 309
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 7e-84
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 34/313 (10%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ LG G FG H+DT +Q A K R+ ++ + E E+QIM L H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 72
Query: 129 NIVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVT 179
N+V + + + L M+ C GG+L + + E L + +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ Y H ++HRDLKPEN + + K D G + G++ + VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 240 EVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--------------G 284
E+L + Y D WS G + + ++G PF + + +R G
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG 252
Query: 285 HIDFSSD--PWPNISSSAKDIVKK----MLHADPKERLSAAEVLNHPWMR-VDGDASDKP 337
+ FSS ++S +++ ML ++R + + N + +D S K
Sbjct: 253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312
Query: 338 LDIAVLTRMKQFR 350
L + + +
Sbjct: 313 LSVMNMVSGRVHT 325
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 257 bits (658), Expect = 8e-83
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-------------------- 106
N Y E+G+G +GV L +++ +A K +S +KLI
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 107 ---NRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA 161
R +E V +E+ I+ L H N+V+L +D + ++ +L G + + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPT 130
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
SE A + ++ + Y H ++HRD+KP N L ED +K DFG+S F
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEF 187
Query: 222 KPGDVF-KDLVGSAYYVAPEVL---RRNY-GAEADIWSAGVILYILLSGVPPFWGETEQS 276
K D + VG+ ++APE L R+ + G D+W+ GV LY + G PF E
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ I P+I+ KD++ +ML +P+ R+ E+ HPW+
Sbjct: 248 LHSKIKSQ--ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 5e-82
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 30/309 (9%)
Query: 39 PPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACK 98
P + ++ G K Y LG G FG + K+ ++ K
Sbjct: 4 EEPPKAVELEGLAACEGEYSQK--------YSTMSPLGSGAFGFVWTAVDKEKNKEVVVK 55
Query: 99 SISSRKLINRDDVED-----VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL-CAG 152
I K++ +ED V E+ I+ + H NI+++ +E++ L+M+ +G
Sbjct: 56 FIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSG 114
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
+LF I E A+ + RQ+V+ V Y ++HRD+K EN + AED +K
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKL 171
Query: 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFW 270
DFG + + + G +F G+ Y APEVL N Y G E ++WS GV LY L+ PF
Sbjct: 172 IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+ + +S +V +L P+ R + +++ PW+
Sbjct: 232 E------LEETVEA--AIHPPYL--VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281
Query: 331 GDASDKPLD 339
+ +D +
Sbjct: 282 VNLADYTWE 290
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 1e-81
Identities = 62/325 (19%), Positives = 121/325 (37%), Gaps = 49/325 (15%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS--------------SRKLINRDDVE 112
N Y R L +G+F L + +A K + K+ + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-------- 164
D + E+QI+ + + + +G + V +I + +
Sbjct: 89 DFKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 165 YSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+ + + ++ Y H+ + HRD+KP N L + +K +DFG S +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR---VKLSDFGESEYM-V 203
Query: 224 GDVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFD 279
K G+ ++ PE GA+ DIWS G+ LY++ V PF + + +F+
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263
Query: 280 AILRGHIDF---------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
I +I++ S+ +S+ D +K L +P ER+++ + L H
Sbjct: 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323
Query: 325 PWMRVDGDASDKPLDIAVLTRMKQF 349
W+ + + + K+
Sbjct: 324 EWLADTNIEDLREFSKELYKKRKKL 348
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 247 bits (632), Expect = 8e-79
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 21/299 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-VRREVQIMHHLTGH 127
Y+ G LG G +G V +T + A K + +KL + E V++E+Q++ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 128 RNIVELKG--AYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+N+++L E++ + ++M+ C G E+ D + + + A Q++ + Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEY 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPE 240
HS G++H+D+KP N L + LK + G++ F D + GS + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 241 VLR--RNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
+ + G + DIWSAGV LY + +G+ PF G+ +F+ I +G ++
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGD--CG 237
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMK-QFRAMNKL 355
D++K ML +P +R S ++ H W R ++ P+ I K ++R+M +
Sbjct: 238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMTVV 296
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 2e-78
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 23/281 (8%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
M Y +G G +G + K + K + + + + + EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLL 59
Query: 122 HHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRII----AKGHYSERAAANLCR 175
L H NIV DR + + ++M+ C GG+L I + + E +
Sbjct: 60 RELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 176 QMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KD 229
Q+ + CH V+HRDLKP N +K DFGL+ F K
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG---KQNVKLGDFGLARILNHDTSFAKT 175
Query: 230 LVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288
VG+ YY++PE + +Y ++DIWS G +LY L + +PPF +++ + I G
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-- 233
Query: 289 SSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P S +I+ +ML+ R S E+L +P +
Sbjct: 234 --RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 1e-77
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 18/292 (6%)
Query: 42 PSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS 101
+S + + ME Y+ +++G G FG LV + +Q+ K I+
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMEK----YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEIN 58
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
++ + + E+ RREV ++ ++ H NIV+ + ++E+ S+ ++MD C GG+LF RI A
Sbjct: 59 ISRM-SSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA 116
Query: 162 --KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ E + Q+ + + H ++HRD+K +N + D ++ DFG++
Sbjct: 117 QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---DGTVQLGDFGIAR 173
Query: 220 FFKPGDVF-KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ +G+ YY++PE+ Y ++DIW+ G +LY L + F + +++
Sbjct: 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
Query: 278 FDAILRGHIDFSSDPWP-NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
I+ G P + S + +V ++ +P++R S +L ++
Sbjct: 234 VLKIISGSF----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 2e-77
Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 320 EVLNHPWMRVD-GDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEM 378
+H R + L +L +K F+ N+LKK+AL +IA++L + EI L+ +
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 379 FKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438
F ++D DNSGT++ +E+ GL K+G + ++ Q++ D + +G I Y +F+ AT+
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK 122
Query: 439 NRVEREEHLYKAFEYFDKDNS 459
++E F++FD D +
Sbjct: 123 QTYLKKEVCLIPFKFFDIDGN 143
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 3e-74
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 18/301 (5%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
G P + + + + + +++GRGQF Y
Sbjct: 5 SQGMQGPPVPQFQPQKALRPDMGYNTLAN----FRIEKKIGRGQFSEVYRAACLLDGVPV 60
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
A K + L++ D +E+ ++ L H N+++ ++ + + +N++++L G+L
Sbjct: 61 ALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 156 FDRI----IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211
I K ER Q+ + + + HS VMHRD+KP N ++ +K
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVK 176
Query: 212 ATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPF 269
D GL F LVG+ YY++PE + N Y ++DIWS G +LY + + PF
Sbjct: 177 LGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
Query: 270 WGETE--QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+G+ S+ I + D+ P + S + +V ++ DP++R V +
Sbjct: 237 YGDKMNLYSLCKKIEQC--DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294
Query: 328 R 328
Sbjct: 295 M 295
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 226 bits (578), Expect = 2e-72
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 322 LNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKS 381
++H G + I VL K + + K +K+A+ +IA+ ++ ++ LK F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 382 MDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441
+D D G IT E+LK GL K G +L L++ D DG+G IDY EFI A + ++
Sbjct: 61 LDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQL 119
Query: 442 EREEHLYKAFEYFDKDNS 459
++ +Y AF FD DN
Sbjct: 120 S-KKLIYCAFRVFDVDND 136
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 5e-14
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-----ESEVR 412
+A + + LS++ + F+ D DN G IT EL L + + + V+
Sbjct: 110 IAAALDRKQLSKKL---IYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVK 166
Query: 413 QLMEAADVDGNGTIDYIEFIT 433
+++ D + +G ID+ EF
Sbjct: 167 RMIRDVDKNNDGKIDFHEFSE 187
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 228 bits (583), Expect = 7e-72
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 38/282 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ +G G FG + H+ + + K + E REV+ + L
Sbjct: 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD 62
Query: 126 GHRNIVELKGAYEDR----------------HSVNLIMDLCAGGELFDRIIAK--GHYSE 167
H NIV G ++ + + M+ C G L I + +
Sbjct: 63 -HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A L Q+ V Y HS +++RDLKP N + +K DFGL K
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKR 178
Query: 228 KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286
G+ Y++PE + ++YG E D+++ G+IL LL F + G I
Sbjct: 179 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA--FETSKFFTDLRDGII 236
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
K +++K+L P++R + +E+L +
Sbjct: 237 S------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 1e-68
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 23/301 (7%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PRP + + +P ED + FG+ LG G F L T +++
Sbjct: 4 TAAEPRPGAGSLQHAQPPPQPRKKRP-ED----FKFGKILGEGSFSTVVLARELATSREY 58
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
A K + R +I + V V RE +M L H V+L ++D + + GEL
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGEL 117
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
I G + E ++V+ + Y H G++HRDLKPEN L + D ++ TDF
Sbjct: 118 LKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE---DMHIQITDF 174
Query: 216 GLS---VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG 271
G + VG+A YV+PE+L +D+W+ G I+Y L++G+PPF
Sbjct: 175 GTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL------SAAEVLNHP 325
E IF I++ DF A+D+V+K+L D +RL + HP
Sbjct: 235 GNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290
Query: 326 W 326
+
Sbjct: 291 F 291
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 220 bits (561), Expect = 4e-67
Identities = 48/347 (13%), Positives = 99/347 (28%), Gaps = 64/347 (18%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR---------NTYIFGRELGRGQFGVT 83
+I S SA S V L + R T + G LG+
Sbjct: 35 RIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAY 94
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL------------------- 124
T ++T + F + + ++ ++ EV + L
Sbjct: 95 LEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 154
Query: 125 -----TGHRNIVELKGAYEDRHSVN--LIMDLCAG------GELFDRIIAKGHYSERAAA 171
+ ++ ++ D ++ + L A
Sbjct: 155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 214
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ ++ H G++H L+P + + + + T F V + G +
Sbjct: 215 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLV--RDGASAVSPI 269
Query: 232 GSAY----YVAPEVLRRN------YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281
G + A +L D W+ G+ +Y + P + + I
Sbjct: 270 GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI 329
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
R NI + +++ L ++RL + + P
Sbjct: 330 FRS--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 216 bits (552), Expect = 8e-67
Identities = 61/313 (19%), Positives = 102/313 (32%), Gaps = 34/313 (10%)
Query: 38 GPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFAC 97
G +S + G + Y+F ++LG G F LV +A
Sbjct: 2 GSSHHHHHHSSGRENL--YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYAL 59
Query: 98 KSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR----HSVNLIMDLCAGG 153
K I + D E+ +RE + H NI+ L H L++ G
Sbjct: 60 KRI---LCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFFKRG 115
Query: 154 ELFDRI----IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209
L++ I +E L + + H+ G HRDLKP N L +
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD---EGQ 172
Query: 210 LKATDFGLSVFFKPG----------DVFKDLVGSAYYVAPEVL----RRNYGAEADIWSA 255
D G + + Y APE+ D+WS
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 256 GVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
G +LY ++ G P+ ++ ++ + P SS+ ++ M+ DP +
Sbjct: 233 GCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI--PQSPRHSSALWQLLNSMMTVDPHQ 290
Query: 315 RLSAAEVLNHPWM 327
R +L+
Sbjct: 291 RPHIPLLLSQLEA 303
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 214 bits (546), Expect = 1e-65
Identities = 75/321 (23%), Positives = 120/321 (37%), Gaps = 47/321 (14%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
GP ++ S VG+ + E R L G F Y + +++A
Sbjct: 2 AGPGSLGGASGRDQSDFVGQTV----ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYA 57
Query: 97 CKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN--------LIMD 148
K + S + + +EV M L+GH NIV+ A + L+ +
Sbjct: 58 LKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE 114
Query: 149 LCAGGELFDRII---AKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSS 203
LC G+L + + ++G S + Q V + H ++HRDLK EN L S+
Sbjct: 115 LC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN 173
Query: 204 SAEDSPLKATDFGLSVFFKPGDVFKDL-------------VGSAYYVAPEVL----RRNY 246
+K DFG + + + Y PE++
Sbjct: 174 ---QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G + DIW+ G ILY+L PF E I+ G P + +++
Sbjct: 231 GEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIP--PHDTQYTVFHSLIRA 284
Query: 307 MLHADPKERLSAAEVLNHPWM 327
ML +P+ERLS AEV++
Sbjct: 285 MLQVNPEERLSIAEVVHQLQE 305
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 2e-65
Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 46/300 (15%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+ + D + + LGRG FGV + +K +A K I R E V REV
Sbjct: 1 GRYLTD----FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREV 54
Query: 119 QIMHHLTGHRNIVELKGAYEDRHS------------VNLIMDLCAGGELFDRIIAKGHYS 166
+ + L H IV A+ ++++ + + M LC L D + +
Sbjct: 55 KALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 167 ---ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
++ Q+ V + HS G+MHRDLKP N F+ D +K DFGL
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQ 170
Query: 224 GDVFKDL-------------VGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPF 269
+ + + VG+ Y++PE + +Y + DI+S G+IL+ LL PF
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF 227
Query: 270 WGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ E+ + + +V+ ML P ER A ++ +
Sbjct: 228 STQMERVRTLTDVRNLKF---PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 2e-63
Identities = 62/283 (21%), Positives = 111/283 (39%), Gaps = 34/283 (12%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ ++G G+FG + + +A K S + L D ++ REV L H
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI----IAKGHYSERAAANLCRQMVTVVHYC 184
++V A+ + + + + C GG L D I ++ E +L Q+ + Y
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 185 HSMGVMHRDLKPENFLFSSS----------------AEDSPLKATDFGLSVFFKPGDVFK 228
HSM ++H D+KP N S + + K D G V
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE- 190
Query: 229 DLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286
G + ++A EVL+ N + +ADI++ + + P + I +G +
Sbjct: 191 --EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP---RNGDQWHEIRQGRL 245
Query: 287 DFSSDPWP-NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P +S +++K M+H DP+ R SA ++ H +
Sbjct: 246 ----PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 3e-62
Identities = 78/113 (69%), Positives = 93/113 (82%)
Query: 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL 406
KQF AMNK KK+AL+VIAE+LSEEEI GLKEMF +D D SG ITFEELKAGL ++G L
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
ESE+ LM+AADVD +GTIDY EFI AT+H+N++ERE+HL+ AF YFDKD S
Sbjct: 61 KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGS 113
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-14
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + E+ L F D D SG IT +EL+ + G + + + +LM D D
Sbjct: 92 LNKIEREDH---LFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDN 146
Query: 423 NGTIDYIEFIT 433
+G IDY EF+
Sbjct: 147 DGRIDYNEFVA 157
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 2e-61
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSE-EEIMGLKEMFKSMDTDNSGTITFEE 394
K L MK+F++ KL + A+ + L+ EE L ++F+ +D + G + +E
Sbjct: 2 KHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKE 61
Query: 395 LKAGLPK-----------LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443
L G K L + E+EV ++++ D D NG I+Y EF+T M +
Sbjct: 62 LIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS 121
Query: 444 EEHLYKAFEYFDKDNS 459
E L AF+ FD D S
Sbjct: 122 RERLLAAFQQFDSDGS 137
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-12
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LS E L F+ D+D SG IT EEL + + Q+++ D + +G
Sbjct: 118 LLLSRER---LLAAFQQFDSDGSGKITNEELGRLFGVTE--VDDETWHQVLQECDKNNDG 172
Query: 425 TIDYIEFIT 433
+D+ EF+
Sbjct: 173 EVDFEEFVE 181
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 4e-61
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +G+G FG +V DTK+ +A K ++ +K + R++V +V +E+QIM L H +V
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVN 79
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D + +++DL GG+L + H+ E ++V + Y + ++HR
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHR 139
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN----YGA 248
D+KP+N L E + TDF ++ + G+ Y+APE+ Y
Sbjct: 140 DMKPDNILLD---EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 249 EADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
D WS GV Y LL G P+ + + I + + S ++K
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQEMVSLLK 252
Query: 306 KMLHADPKERL-SAAEVLNHPWMR 328
K+L +P +R ++V N P+M
Sbjct: 253 KLLEPNPDQRFSQLSDVQNFPYMN 276
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 1e-60
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 43 SSSATSATSSSVGRVLGKPMEDVRNTYI-------------FGRELGRGQFGVTYLVTHK 89
+++ + SV L K ED + + LG G FG LV HK
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 90 DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149
++ +A K + +K++ +E E +I+ + +V+L+ +++D ++ ++M+
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEY 122
Query: 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209
AGGE+F + G +SE A Q+V Y HS+ +++RDLKPEN L
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ---QGY 179
Query: 210 LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPP 268
++ TDFG + + L G+ +APE++ Y D W+ GV++Y + +G PP
Sbjct: 180 IQVTDFGFAK--RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL-----SAAEVLN 323
F+ + I++ I+ G + F + SS KD+++ +L D +R ++ N
Sbjct: 238 FFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 324 HPW 326
H W
Sbjct: 294 HKW 296
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 1e-60
Identities = 46/286 (16%), Positives = 95/286 (33%), Gaps = 36/286 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIM 121
LG G F Y T D KQ+F K + + ++ +
Sbjct: 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---EFYIGTQLMERL 121
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-----SERAAANLCRQ 176
++ A+ ++ L+ +L + G L + I + + + +
Sbjct: 122 KPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP--------LKATDFGLSV---FFKPGD 225
M+ ++ H ++H D+KP+NF+ + + L D G S+ F G
Sbjct: 181 MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240
Query: 226 VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILR 283
+F ++ + E+L + + + D + +Y +L G + + R
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR 300
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
D W + ML+ L + ++L +V
Sbjct: 301 RL--PHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 198 bits (506), Expect = 5e-59
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 16/262 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLF 135
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L +++ E+ A ++V + HSMG +HRD+
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 194
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEVLRR-----NYG 247
KP+N L S LK DFG + + + VG+ Y++PEVL+ YG
Sbjct: 195 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 251
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
E D WS GV LY +L G PF+ ++ + I+ + +IS AK+++
Sbjct: 252 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAF 311
Query: 308 LHADPKERL---SAAEVLNHPW 326
L D + RL E+ H +
Sbjct: 312 LT-DREVRLGRNGVEEIKRHLF 332
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 1e-58
Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ R LG G FG +L+ + + +A K + ++ VE E ++ +T H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 66
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+ + G ++D + +IMD GGELF + + A ++ + Y HS
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YG 247
+++RDLKPEN L + +K TDFG + DV L G+ Y+APEV+ Y
Sbjct: 127 IIYRDLKPENILLDK---NGHIKITDFGFAK--YVPDVTYTLCGTPDYIAPEVVSTKPYN 181
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D WS G+++Y +L+G PF+ ++ IL + F P + KD++ ++
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRL 237
Query: 308 LHADPKERL-----SAAEVLNHPW 326
+ D +RL +V NHPW
Sbjct: 238 ITRDLSQRLGNLQNGTEDVKNHPW 261
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 1e-58
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 338 LDIAVLTRMKQFRAMNKLKKVALKVIAENLS--EEEIMGLKEMFKSMDTDNSGTITFEEL 395
+ VL MK + + ++ + + ++A LS I + E+F +DT+++G+++ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
L +G + + ++ ++++A D++ G I Y EF+ +E L AF D
Sbjct: 62 YTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIE-STFLKAAFNKID 118
Query: 456 KDNS 459
KD
Sbjct: 119 KDED 122
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 5e-11
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 13/84 (15%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+A +N+ LK F +D D G I+ ++ + + L +++ +
Sbjct: 96 MAGCYRWKNIESTF---LKAAFNKIDKDEDGYISKSDIVSLVHDKV--LDNNDIDNFFLS 150
Query: 418 ADVDGNGT--------IDYIEFIT 433
G I + EF
Sbjct: 151 VHSIKKGIPREHIINKISFQEFKD 174
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 4e-56
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 20/272 (7%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH--HL 124
N + R +GRG FG Y DT + +A K + +++ + E ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL++
Sbjct: 309 HNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQK 364
Query: 245 N--YGAEADIWSAGVILYILLSGVPPFWGETEQS---IFDAILRGHIDFSSDPWPNISSS 299
Y + AD +S G +L+ LL G PF + I L ++ + S
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPE 420
Query: 300 AKDIVKKMLHADPKERL-----SAAEVLNHPW 326
+ +++ +L D RL A EV P+
Sbjct: 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 7e-56
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG F +V K T Q +A K ++ ++ R +V R E ++ + R I +L
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLH 127
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A++D + + L+M+ GG+L + G A ++V + H +G +HRD
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRD 187
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEVLRR------- 244
+KP+N L ++ DFG + + + VG+ Y++PE+L+
Sbjct: 188 IKPDNILLDR---CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 245 -NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKD 302
+YG E D W+ GV Y + G PF+ ++ + I+ S + A+D
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARD 304
Query: 303 IVKKMLHADPKERL---SAAEVLNHPW 326
++++L P+ RL A + HP+
Sbjct: 305 FIQRLLC-PPETRLGRGGAGDFRTHPF 330
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 187 bits (478), Expect = 2e-55
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 40 PRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKS 99
P+ SS + + LG +++ + F R LG+G FG L K+T +A K
Sbjct: 2 PKESSKEGNGIGVNSSNRLG--IDN----FEFIRVLGKGSFGKVMLARVKETGDLYAVKV 55
Query: 100 ISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI 159
+ ++ DDVE E +I+ H + +L ++ + +M+ GG+L I
Sbjct: 56 LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI 115
Query: 160 IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS- 218
+ E A ++++ + + H G+++RDLK +N L + K DFG+
Sbjct: 116 QKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH---EGHCKLADFGMCK 172
Query: 219 VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
G G+ Y+APE+L+ YG D W+ GV+LY +L G PF E E +
Sbjct: 173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL------SAAEVLNHPWMR 328
F+AIL + + P + A I+K + +P RL +L HP+ +
Sbjct: 233 FEAILNDEVVY---P-TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 2e-55
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG +L K T Q FA K++ ++ DDVE E +++ H + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + ++ +M+ GG+L I + + A +++ + + HS G+++RDL
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K +N L D +K DFG+ G+ Y+APE+L Y D
Sbjct: 145 KLDNILLDK---DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GV+LY +L G PF G+ E+ +F +I + + P + AKD++ K+ +P
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---P-RWLEKEAKDLLVKLFVREP 257
Query: 313 KERL-SAAEVLNHPWMR 328
++RL ++ HP R
Sbjct: 258 EKRLGVRGDIRQHPLFR 274
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 7e-55
Identities = 75/302 (24%), Positives = 139/302 (46%), Gaps = 16/302 (5%)
Query: 34 IDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNT---YIFGRELGRGQFGVTYLVTHKD 90
I P P ++ + + ++ P + + F + +G+G FG L HK
Sbjct: 2 ISQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKA 61
Query: 91 TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150
+ +A K + + ++ + + + + E ++ H +V L +++ + ++D
Sbjct: 62 EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121
Query: 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210
GGELF + + + E A ++ + + Y HS+ +++RDLKPEN L S +
Sbjct: 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGHI 178
Query: 211 KATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPP 268
TDFGL + G+ Y+APEVL + Y D W G +LY +L G+PP
Sbjct: 179 VLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL----SAAEVLNH 324
F+ ++D IL + PNI++SA+ +++ +L D +RL E+ +H
Sbjct: 239 FYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294
Query: 325 PW 326
+
Sbjct: 295 VF 296
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 8e-55
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +V K+ + FA K ++ +++ R + R E ++ + + I L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLH 140
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A++D +++ L+MD GG+L + + E A +MV + H + +HRD
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD 200
Query: 194 LKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD-LVGSAYYVAPEVLRRN------ 245
+KP+N L + ++ DFG + G V VG+ Y++PE+L+
Sbjct: 201 IKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW-PNISSSAKDIV 304
YG E D WS GV +Y +L G PF+ E+ + I+ F ++S +AKD++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
Query: 305 KKMLHADPKERL---SAAEVLNHPW 326
++++ + RL + HP+
Sbjct: 318 RRLIC-SREHRLGQNGIEDFKKHPF 341
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 1e-54
Identities = 75/334 (22%), Positives = 125/334 (37%), Gaps = 30/334 (8%)
Query: 5 NGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMED 64
+ S Q ++ A + L P + + + V + E+
Sbjct: 3 GSVSSGQAHSLASLAKTWSSGSAKLQRL------GPETEDNEGVLLTEKLKPVDYEYREE 56
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-REVQIMHH 123
V +GRG FG + + K T Q A K + +E R E+
Sbjct: 57 VHW-MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV---------RLEVFRVEELVACAG 106
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
L+ IV L GA + VN+ M+L GG L I G E A Q + + Y
Sbjct: 107 LS-SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV------FKDLVGSAYYV 237
H+ ++H D+K +N L SS S DFG ++ +P + + G+ ++
Sbjct: 166 LHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 223
Query: 238 APEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPN 295
APEV+ A+ DIWS+ ++ +L+G P+ I P P+
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL-KIASEPPPIREIP-PS 281
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +++ L +P R SA E+ +
Sbjct: 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 1e-54
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + S G+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K +N + S + +K DFG+ G K G+ Y+APE++ YG D
Sbjct: 148 KLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PF GE E +F +I+ ++ + P ++S A I K ++ P
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---P-KSMSKEAVAICKGLMTKHP 260
Query: 313 KERL-----SAAEVLNHPWMR 328
+RL ++ H + R
Sbjct: 261 GKRLGCGPEGERDIKEHAFFR 281
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 3e-54
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + +I +D+V E +++ + T H + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++ + +M+ GGELF + + ++E A ++V+ + Y HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + D +K TDFGL G K G+ Y+APEVL N YG D
Sbjct: 132 KLENLMLDK---DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDP 244
Query: 313 KERL-----SAAEVLNHPWMR 328
K+RL A EV+ H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL 265
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 9e-54
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
NT+ R LG+G FG + T + +ACK + +++ R E QI+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVN 242
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLCRQMVTVVHYC 184
R +V L AYE + ++ L++ L GG+L I + + + E A ++ +
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H +++RDLKPEN L ++ +D GL+V G K VG+ Y+APEV++
Sbjct: 303 HRERIVYRDLKPENILLDD---HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHIDFSSDPWPNISSS 299
Y D W+ G +LY +++G PF ++ + + ++S S
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFSPQ 415
Query: 300 AKDIVKKMLHADPKERL-----SAAEVLNHPW 326
A+ + ++L DP ERL SA EV HP
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 2e-53
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 331 GDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTI 390
G PL + M KL+ L A I GL F+ +D D S ++
Sbjct: 3 GLVPRGPLGSHMD---AVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSL 54
Query: 391 TFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450
+E + GL KLG L ++E + D +G+GT+D EF+ A RE + A
Sbjct: 55 DADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAA 114
Query: 451 FEYFDKDNS 459
F D+
Sbjct: 115 FAKLDRSGD 123
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 5e-53
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 24/271 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG + LV K T + +A K + + + +D++ V+ E + + H +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +++ GG+L + + E A ++ ++Y H G+++RDL
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K +N L S + +K TD+G+ +PGD G+ Y+APE+LR YG D
Sbjct: 137 KLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 253 WSAGVILYILLSGVPPFW---------GETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
W+ GV+++ +++G PF TE +F IL I ++S A +
Sbjct: 194 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASV 249
Query: 304 VKKMLHADPKERL------SAAEVLNHPWMR 328
+K L+ DPKERL A++ HP+ R
Sbjct: 250 LKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 5e-53
Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 31/326 (9%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRE-------LGRGQ 79
HH + D P + + E + + G + +GRG
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGS 64
Query: 80 FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139
+ LV K T + +A + + + + +D++ V+ E + + H +V L ++
Sbjct: 65 YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 124
Query: 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199
+ +++ GG+L + + E A ++ ++Y H G+++RDLK +N
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184
Query: 200 LFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGV 257
L S + +K TD+G+ +PGD G+ Y+APE+LR YG D W+ GV
Sbjct: 185 LLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 258 ILYILLSGVPPFW---------GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
+++ +++G PF TE +F IL I ++S A ++K L
Sbjct: 242 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFL 297
Query: 309 HADPKERL------SAAEVLNHPWMR 328
+ DPKERL A++ HP+ R
Sbjct: 298 NKDPKERLGCHPQTGFADIQGHPFFR 323
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 6e-53
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G +G+ Y + + A K I + + + E+ + HL H+NIV
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLK-HKNIV 82
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMG 188
+ G++ + + + M+ GG L + +K +E+ +Q++ + Y H
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-- 245
++HRD+K +N L ++ LK +DFG S + G+ Y+APE++ +
Sbjct: 143 IVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 246 -YGAEADIWSAGVILYILLSGVPPFW--GETEQSIFDAILRGHIDFSSDPWP---NISSS 299
YG ADIWS G + + +G PPF+ GE + ++F + ++S+
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF------KVGMFKVHPEIPESMSAE 254
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332
AK + K DP +R A ++L +++V
Sbjct: 255 AKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-52
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F E+GRG F Y +T + A + RKL + + + + E +++ L H NI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNI 87
Query: 131 VELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
V ++E + + L+ +L G L + + + CRQ++ + + H+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 187 MG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HRDLK +N + +K D GL+ K K ++G+ ++APE+
Sbjct: 148 RTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMYEE 204
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSAKDI 303
Y D+++ G+ + + + P+ I+ + G S K+I
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAIPEVKEI 262
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVD 330
++ + + ER S ++LNH + + +
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQEE 289
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 1e-52
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 19/329 (5%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKP-MEDVR 66
+ ++ + KI +A + + + + D
Sbjct: 285 EYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTD-- 342
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ F LG+G FG L K T + +A K + +I DDVE E +++
Sbjct: 343 --FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
+ +L ++ + +M+ GG+L I G + E A ++ + + S
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN 245
G+++RDLK +N + S + +K DFG+ G K G+ Y+APE++
Sbjct: 461 KGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ 517
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W+ GV+LY +L+G PF GE E +F +I+ ++ + ++S A I
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAIC 573
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
K ++ P +RL ++ H + R
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFR 602
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 3e-52
Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 19/265 (7%)
Query: 75 LGRGQFGVTYLVTH---KDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNI 130
LG+G +G + V +T + FA K + ++ N D + E I+ + H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFI 83
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L A++ + LI++ +GGELF ++ +G + E A ++ + + H G++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGA 248
+RDLKPEN + + +K TDFGL G V G+ Y+APE+L R+ +
Sbjct: 144 YRDLKPENIMLNH---QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
D WS G ++Y +L+G PPF GE + D IL+ ++ P P ++ A+D++KK+L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---P-PYLTQEARDLLKKLL 256
Query: 309 HADPKERL-----SAAEVLNHPWMR 328
+ RL A EV HP+ R
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 3e-52
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 23/275 (8%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ ++ R LGRG FG + K T + +ACK ++ ++L R + E +I+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVH 243
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVH 182
R IV L A+E + + L+M + GG++ I + E A Q+V+ +
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEV 241
+ H +++RDLKPEN L D ++ +D GL+V K G+ ++APE+
Sbjct: 304 HLHQRNIIYRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNI 296
L Y D ++ GV LY +++ PF E + + +L + +
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416
Query: 297 SSSAKDIVKKMLHADPKERL-----SAAEVLNHPW 326
S ++KD + +L DP++RL S + HP
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 4e-52
Identities = 88/331 (26%), Positives = 148/331 (44%), Gaps = 22/331 (6%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKP--MEDV 65
+ + + TTA G PS ++ + M +
Sbjct: 91 ETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNE- 149
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ + + LG+G FG LV K T + +A K + ++ +D+V E +++ + +
Sbjct: 150 ---FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 205
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H + LK +++ + +M+ GGELF + + +SE A ++V+ + Y H
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 186 S-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR 243
S V++RDLK EN + D +K TDFGL K G K G+ Y+APEVL
Sbjct: 266 SEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 244 RN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
N YG D W GV++Y ++ G PF+ + + +F+ IL I F + AK
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKS 378
Query: 303 IVKKMLHADPKERL-----SAAEVLNHPWMR 328
++ +L DPK+RL A E++ H +
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 6e-51
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 19/262 (7%)
Query: 75 LGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G FG +LV D +Q +A K + L RD V + E I+ H IV
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDILVE-VNHPFIV 89
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G+++
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 149
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAE 249
RDLKPEN L + +K TDFGLS G+ Y+APEV+ R +
Sbjct: 150 RDLKPENILLDE---EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
AD WS GV+++ +L+G PF G+ + IL+ + P +S A+ +++ +
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM---P-QFLSPEAQSLLRMLFK 262
Query: 310 ADPKERL-----SAAEVLNHPW 326
+P RL E+ H +
Sbjct: 263 RNPANRLGAGPDGVEEIKRHSF 284
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 173 bits (439), Expect = 3e-50
Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 19/173 (10%)
Query: 293 WPNISSSAKDIVKKMLHADPK------ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRM 346
I+ ++ K+ D K R A D A + L +
Sbjct: 43 EAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARG--DAAAEKQRLASLLKDLE 100
Query: 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL 406
N+L+ LSEE+ L+++F S SG +F++LK L K +
Sbjct: 101 DDASGYNRLR-----PSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTI 155
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
E +++L + D G + YI + + L F D +++
Sbjct: 156 PEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA------LVADFRKIDTNSN 202
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 6e-13
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFIT 433
L+ ++ D D SG ++ EE++ L + + DVD + ++ Y EF+
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Query: 434 ATMHMNRVE 442
+ M +
Sbjct: 315 LVLLMFHDD 323
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 1e-07
Identities = 12/115 (10%), Positives = 34/115 (29%), Gaps = 5/115 (4%)
Query: 345 RMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT 404
++ +K + L+ +E+ L E + + + E + +
Sbjct: 27 KLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAERERE-AARGDA 85
Query: 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + L++ + D +G ++ + L + F S
Sbjct: 86 AAEKQRLASLLKDLEDDASGYNRLRPSKP---MLSEEDTNI-LRQLFLSSAVSGS 136
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 4e-50
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 38/325 (11%)
Query: 35 DPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRE-------------LGRGQFG 81
+ G ++ TSA G L ++R + G LG G +G
Sbjct: 9 EEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYG 68
Query: 82 VTYLVTH---KDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIVELKGAY 137
+LV DT + +A K + ++ + E R E Q++ H+ +V L A+
Sbjct: 69 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 128
Query: 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE 197
+ ++LI+D GGELF + + ++E ++V + + H +G+++RD+K E
Sbjct: 129 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLE 188
Query: 198 NFLFSSSAEDSPLKATDFGLS--VFFKPGDVFKDLVGSAYYVAPEVLRRN---YGAEADI 252
N L S + + TDFGLS + D G+ Y+AP+++R + D
Sbjct: 189 NILLDS---NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 245
Query: 253 WSAGVILYILLSGVPPFWGETEQS----IFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
WS GV++Y LL+G PF + E++ I IL+ + +S+ AKD+++++L
Sbjct: 246 WSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLL 301
Query: 309 HADPKERL-----SAAEVLNHPWMR 328
DPK+RL A E+ H + +
Sbjct: 302 MKDPKKRLGCGPRDADEIKEHLFFQ 326
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 2e-49
Identities = 65/96 (67%), Positives = 81/96 (84%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
GTIDY EFI AT+H+N++EREE+L AF YFDKD S
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGS 96
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 1e-18
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + EE L F D D SG IT +E++ G L + + +++ D D
Sbjct: 75 LNKLEREEN---LVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDN 129
Query: 423 NGTIDYIEFIT--------ATMHMNRVEREEHLYKAFEYFDKDNS 459
+G IDY EF + + + +L A D ++
Sbjct: 130 DGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSN 174
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 161 bits (408), Expect = 6e-47
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 6/136 (4%)
Query: 324 HPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMD 383
P + + +P+ + + ++ ++ + + ++ + + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 384 TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443
D SGT+ EL G G RLS ++M D D NG I + EF+ M
Sbjct: 62 RDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM----- 116
Query: 444 EEHLYKAFEYFDKDNS 459
E Y F + S
Sbjct: 117 -ELAYNLFVMNARARS 131
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-46
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 27/322 (8%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLV 86
HH +G+ + S T + R++ D R ++G G G+ L
Sbjct: 6 HHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQ-GDPRLLLDSYVKIGEGSTGIVCLA 64
Query: 87 THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146
K + +Q A K + L + E + EV IM H N+VE+ +Y + ++
Sbjct: 65 REKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVL 120
Query: 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206
M+ GG L D I+++ +E A +C ++ + Y H+ GV+HRD+K ++ L +
Sbjct: 121 MEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR 179
Query: 207 DSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
+K +DFG + LVG+ Y++APEV+ R+ Y E DIWS G+++ ++
Sbjct: 180 ---VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 265 GVPPFWGETEQSIFDAI-------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
G PP++ ++ + L+ S +D +++ML DP+ER +
Sbjct: 237 GEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPV--------LRDFLERMLVRDPQERAT 288
Query: 318 AAEVLNHPWMRVDGDASD-KPL 338
A E+L+HP++ G PL
Sbjct: 289 AQELLDHPFLLQTGLPECLVPL 310
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 2e-46
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 50/305 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+G G G + + + T A K + R+ N+++ + + ++ ++ IV+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHR 192
G + V + M+L + +G ER + +V ++Y GV+HR
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLRRN-- 245
D+KP N L + +K DFG+S G + D G A Y+APE +
Sbjct: 150 DVKPSNILLDERGQ---IKLCDFGIS-----GRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 246 ----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI----------LRGHIDFSSD 291
Y AD+WS G+ L L +G P+ + ++ F+ + L GH+ FS D
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPY--KNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA-----VLTRM 346
+ VK L D ++R ++L H +++ +D+A V+ +
Sbjct: 260 --------FQSFVKDCLTKDHRKRPKYNKLLEHSFIK---RYETLEVDVASWFKDVMAKT 308
Query: 347 KQFRA 351
+ R+
Sbjct: 309 ESPRS 313
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 4e-46
Identities = 75/330 (22%), Positives = 129/330 (39%), Gaps = 23/330 (6%)
Query: 13 QLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFG 72
+ D N P A S V + K +D +
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFK--DDPEKLFSDL 59
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y + A K +S + + +D+ +EV+ + L H N ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+G Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L S +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 179 DVKAGNILLSEPGL---VKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 249 EADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDP---WPNISSSAKDIV 304
+ D+WS G+ L PP + +++ HI + P + S ++ V
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALY------HIAQNESPALQSGHWSEYFRNFV 286
Query: 305 KKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
L P++R ++ +L H ++ + +
Sbjct: 287 DSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 1e-45
Identities = 80/329 (24%), Positives = 129/329 (39%), Gaps = 49/329 (14%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
P + + V GK E Y + +G G FGV + ++ +
Sbjct: 9 PLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVES-DEV 67
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK------GAYEDRHSVNLIMDL 149
A K + D RE+QIM + H N+V+LK G +D +NL+++
Sbjct: 68 AIKKV-------LQDKRFKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119
Query: 150 CAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205
++ + L + Q++ + Y HS+G+ HRD+KP+N L
Sbjct: 120 V-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--P 176
Query: 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILL 263
LK DFG + G+ + S YY APE++ NY DIWS G ++ L+
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
Query: 264 SGVPPFWGETE----QSIFD-----------AILRGHIDFS-----SDPW-----PNISS 298
G P F GE+ I + +++ P+ P
Sbjct: 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPP 296
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWM 327
A D++ ++L P RL+A E L HP+
Sbjct: 297 DAIDLISRLLEYTPSARLTAIEALCHPFF 325
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 1e-45
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 22/284 (7%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + Y ++G+G G Y T Q+ A + + L + E + E+ +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMR 72
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + +
Sbjct: 73 ENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEV 241
+ HS V+HRD+K +N L +K TDFG P + +VG+ Y++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDP----WPN 295
+ R YG + DIWS G++ ++ G PP+ E ++++ I + P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNGTPELQNPEK 241
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPL 338
+S+ +D + + L D ++R SA E+L H ++++ S PL
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 1e-45
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+GRG +G + HK + Q A K I R ++ + + + ++ ++ + IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSM 187
GA + M+L + FD+ E + V +++
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 188 G-VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEV 241
++HRD+KP N L S +K DFG+S G + + G Y+APE
Sbjct: 145 LKIIHRDIKPSNILLDRSGN---IKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPER 196
Query: 242 L-----RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA---ILRGHI-DFSSDP 292
+ R+ Y +D+WS G+ LY L +G P+ S+FD +++G S+
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSE 254
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S S + V L D +R E+L HP++ ++ +++A
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL---MYEERAVEVA 300
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 3e-45
Identities = 71/294 (24%), Positives = 137/294 (46%), Gaps = 14/294 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + ++G+G FG + T++ A K I + D++ED+++E+ ++
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLS 75
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ + G+Y + +IM+ GG D ++ G E A + R+++ +
Sbjct: 76 QCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLD 133
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEV 241
Y HS +HRD+K N L S E +K DFG++ + ++ VG+ +++APEV
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 190
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
++++ Y ++ADIWS G+ L G PP + I + + + S
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPL 247
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
K+ V+ L+ +P R +A E+L H + + +A ++ R K+++A
Sbjct: 248 KEFVEACLNKEPSFRPTAKELLKHKF--ILRNAKKTSYLTELIDRYKRWKAEQS 299
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 1e-44
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHL 124
Y ++G G +GV + ++DT Q A K D V RE++++ L
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF---LESEDDPVIKKIALREIRMLKQL 59
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVH 182
H N+V L + + ++L+ + C DR + E ++ Q + V+
Sbjct: 60 K-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVN 116
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
+CH +HRD+KPEN L + + +K DFG + + P D + D V + +Y +PE+
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSV---IKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI-------------L 282
L YG D+W+ G + LLSGVP + G+++ I +
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 283 RGHIDFSSDPW----------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332
+ PNIS A ++K LH DP ERL+ ++L+HP+ +
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
Query: 333 ASDKP 337
D
Sbjct: 294 IEDLA 298
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-44
Identities = 73/325 (22%), Positives = 141/325 (43%), Gaps = 27/325 (8%)
Query: 44 SSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR 103
S A+ + + S+ + + D + +G G +G Y H T Q A K +
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-- 58
Query: 104 KLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN------LIMDLCAGGELFD 157
+ D+ E++++E+ ++ + HRNI GA+ ++ L+M+ C G + D
Sbjct: 59 --VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
Query: 158 --RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
+ E A +CR+++ + + H V+HRD+K +N L + +AE +K DF
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE---VKLVDF 173
Query: 216 GLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN------YGAEADIWSAGVILYILLSGVPP 268
G+S ++ +G+ Y++APEV+ + Y ++D+WS G+ + G PP
Sbjct: 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 269 FWGETEQSIFDAILRGHI-DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
I R S W S + ++ L + +R + +++ HP++
Sbjct: 234 LCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
Query: 328 RVDGDASD-KPLDIAVLTRMKQFRA 351
R + + + R K+ R
Sbjct: 291 RDQPNERQVRIQLKDHIDRTKKKRG 315
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 1e-44
Identities = 80/353 (22%), Positives = 129/353 (36%), Gaps = 56/353 (15%)
Query: 12 TQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIF 71
T + + P P +K+ ++ + P +Y
Sbjct: 7 TTSFAESCKPVQQPSAF-GSMKVSRDKDGSKVTTVVATPGQG-------PDRPQEVSYTD 58
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
+ +G G FGV Y D+ + A K + D RE+QIM L H NIV
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIV 110
Query: 132 ELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVV 181
L+ G +D +NL++D ++ + + Q+ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
Y HS G+ HRD+KP+N L LK DFG + G+ + S YY APE+
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSIFDAILRG 284
+ +Y + D+WSAG +L LL G P F G++ + +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 287
Query: 285 HIDFS-----SDPW-----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ +F + PW P A + ++L P RL+ E H +
Sbjct: 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-44
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELGRG +GV + H + Q A K I R +N + + + ++ I V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 134 KGAYEDRHSVNLIMDLCAGG--ELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHS-MGV 189
GA V + M+L + + ++I K E + +V + + HS + V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLR- 243
+HRD+KP N L ++ + +K DFG+S G + D+ G Y+APE +
Sbjct: 132 IHRDVKPSNVLINALGQ---VKMCDFGIS-----GYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFD---AILRGHI-DFSSDPWPN 295
+ Y ++DIWS G+ + L P+ ++ + F ++ +D +
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF-- 239
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S+ D + L + KER + E++ HP+ K D+A
Sbjct: 240 -SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT---LHESKGTDVA 281
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 8e-44
Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 24/284 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + ELG G FG Y +K+T A K I + +++ED E++I+
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE---TKSEEELEDYIVEIEILA 71
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVV 181
H IV+L GAY + ++++ C GG + + +E +CRQM+ +
Sbjct: 72 TCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPE 240
++ HS ++HRDLK N L + + ++ DFG+S +D +G+ Y++APE
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 241 VLRRN------YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-- 292
V+ Y +ADIWS G+ L + PP E + +L I S P
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH---ELNPMRVLL--KIAKSDPPTL 242
Query: 293 --WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
S +D +K L +P+ R SAA++L HP++
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNK 286
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 2e-43
Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 28/259 (10%)
Query: 88 HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147
++ + + + L + ++ +++ M + +N V + + + M
Sbjct: 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQLQPSSPKVYLYIQM 140
Query: 148 DLCAGGELFDRIIAKGHYSER---AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
LC L D + + +R ++ Q+ V + HS G+MHRDLKP N F+
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM- 199
Query: 205 AEDSPLKATDFGLSVFFKPGDVFKDL-------------VGSAYYVAPEVLR-RNYGAEA 250
D +K DFGL + + + VG+ Y++PE + NY +
Sbjct: 200 --DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV 257
Query: 251 DIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
DI+S G+IL+ LL F + E+ I + + +V+ ML
Sbjct: 258 DIFSLGLILFELLY---SFSTQMERVRIITDVRNLKF---PLLFTQKYPQEHMMVQDMLS 311
Query: 310 ADPKERLSAAEVLNHPWMR 328
P ER A +++ +
Sbjct: 312 PSPTERPEATDIIENAIFE 330
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 3e-43
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 47/305 (15%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMH 122
Y +G G +G+ +KDT + A K K + DD + V+ RE++++
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK-----KFLESDDDKMVKKIAMREIKLLK 79
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTV 180
L H N+V L + + L+ + + + + Q++
Sbjct: 80 QLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIING 136
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ +CHS ++HRD+KPEN L S S +K DFG + PG+V+ D V + +Y AP
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGV---VKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--GHID------FS 289
E+L YG D+W+ G ++ + G P F G+++ I+ G++ F+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253
Query: 290 SDPW-------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+P P +S D+ KK LH DP +R AE+L+H + ++D
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
Query: 331 GDASD 335
G A
Sbjct: 314 GFAER 318
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 5e-43
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 51/334 (15%)
Query: 26 GHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYL 85
HH L+ GP S SA + +S ++ Y +LG G +G Y
Sbjct: 6 HHHMGTLEAQTQGPGSMSVSAAPSATS---------IDR----YRRITKLGEGTYGEVYK 52
Query: 86 VTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVELKGAYEDRHSV 143
T + A K I +L + ++ REV ++ L HRNI+ELK H +
Sbjct: 53 AIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRL 108
Query: 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203
+LI + +L + S R + Q++ V++CHS +HRDLKP+N L S
Sbjct: 109 HLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSV 167
Query: 204 SAEDSP--LKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVI 258
S LK DFGL+ F P F + + +Y PE+L R+Y DIWS I
Sbjct: 168 SDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACI 227
Query: 259 LYILLSGVPPFWGETEQSIFDAILR--GHID------FSSDPW----------------- 293
+L P F G++E I G D ++ P
Sbjct: 228 WAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL 287
Query: 294 -PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ D++ ML DP +R+SA L HP+
Sbjct: 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 9e-43
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 28/292 (9%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
P R+ Y +G G V K++ A K I+ K + ++++ +E+
Sbjct: 7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEI 64
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--------RIIAKGHYSERAA 170
Q M H NIV ++ + + L+M L +GG + D G E
Sbjct: 65 QAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGDVFKD 229
A + R+++ + Y H G +HRD+K N L ++ DFG+S F GD+ ++
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRN 180
Query: 230 L-----VGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
VG+ ++APEV+ + Y +ADIWS G+ L +G P+ + L
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 240
Query: 283 RG------HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + S + ++ L DP++R +AAE+L H + +
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 1e-42
Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 47/339 (13%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK 92
+ PPR S + + + +LG G +G Y HK+T
Sbjct: 4 TVQLRNPPRRQLKKLDEDSLT---------KQPEEVFDVLEKLGEGSYGSVYKAIHKETG 54
Query: 93 QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
Q A K + D++++ +E+ IM ++V+ G+Y + ++M+ C
Sbjct: 55 QIVAIKQVP-----VESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCGA 108
Query: 153 GELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211
G + D I + +E A + + + + Y H M +HRD+K N L ++ K
Sbjct: 109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH---AK 165
Query: 212 ATDFG----LSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGV 266
DFG L+ + +G+ +++APEV++ Y ADIWS G+ + G
Sbjct: 166 LADFGVAGQLTDTMAKRNTV---IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 267 PPFWGETEQSIFDAI-------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319
PP+ I R +S + D VK+ L P++R +A
Sbjct: 223 PPYADIHPMRAIFMIPTNPPPTFRKPELWSDN--------FTDFVKQCLVKSPEQRATAT 274
Query: 320 EVLNHPWMRVDGDASD-KPLDIAVLTRMKQFRAMNKLKK 357
++L HP++R S + L + + + +
Sbjct: 275 QLLQHPFVRSAKGVSILRDL----INEAMDVKLKRQESQ 309
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 8e-42
Identities = 75/294 (25%), Positives = 122/294 (41%), Gaps = 43/294 (14%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIM 121
Y LG GQF Y K+T Q A K I KL +R + +D RE++++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLL 66
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVT 179
L+ H NI+ L A+ + +++L+ D + + +
Sbjct: 67 QELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQ 123
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVA 238
+ Y H ++HRDLKP N L + LK DFGL+ F P + V + +Y A
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGV---LKLADFGLAKSFGSPNRAYTHQVVTRWYRA 180
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI----------- 281
PE+L R YG D+W+ G IL LL VP G+++ IF+ +
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 282 --LRGHIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
L ++ F S P + D+++ + +P R++A + L +
Sbjct: 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 1e-41
Identities = 77/351 (21%), Positives = 127/351 (36%), Gaps = 59/351 (16%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK 92
+++ R A VG + +D + ELG G GV + V+HK +
Sbjct: 6 ELELDEQQRKRLEAFLTQKQKVGEL---KDDD----FEKISELGAGNGGVVFKVSHKPSG 58
Query: 93 QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
A K I I + RE+Q++H IV GA+ +++ M+ G
Sbjct: 59 LVMARKLI--HLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG-VMHRDLKPENFLFSSSAEDSPLK 211
G L + G E+ + ++ + Y +MHRD+KP N L +S E +K
Sbjct: 116 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IK 172
Query: 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPF- 269
DFG+S + VG+ Y++PE L+ Y ++DIWS G+ L + G P
Sbjct: 173 LCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231
Query: 270 -------------------WGETEQSIFDAILRGHIDFSSDPWPNI-------------- 296
+ S P I
Sbjct: 232 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK 291
Query: 297 ------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S +D V K L +P ER +++ H +++ + + +D A
Sbjct: 292 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK---RSDAEEVDFA 339
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 4e-41
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 352 MNKLKK-VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
M+K + + + L EE+ + E F D +N G + + ELK + LG L + E
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 411 VRQLMEAADVDGNGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
+ L++ D +G + Y +F + + + + + +AF+ FD D++
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHT 110
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 5e-16
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EI K F+ D D++G I+ + L+ +LG L++ E+R ++E D+DG+G I+
Sbjct: 94 PLDEI---KRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEIN 150
Query: 428 YIEFIT 433
EFI
Sbjct: 151 ENEFIA 156
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 3e-04
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L++V K + E L++EE L+ M + D D G I E
Sbjct: 118 LRRV-AKELGETLTDEE---LRAMIEEFDLDGDGEINENE 153
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 7e-41
Identities = 77/305 (25%), Positives = 118/305 (38%), Gaps = 58/305 (19%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIM 121
+ + +LG G + Y +K T A K + + D E+ RE+ +M
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-------KLDSEEGTPSTAIREISLM 57
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQ 176
L H NIV L + + L+ DL + Q
Sbjct: 58 KELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAY 235
++ + +CH ++HRDLKP+N L + + LK DFGL+ F P + F V + +
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI-------- 281
Y AP+VL R Y DIWS G IL +++G P F G ++ IFD +
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 282 --------------------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
LR + + D + +L +P RLSA +
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQV--LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 322 LNHPW 326
L+HPW
Sbjct: 292 LHHPW 296
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-40
Identities = 66/369 (17%), Positives = 128/369 (34%), Gaps = 64/369 (17%)
Query: 63 EDVRNTYIFGRELGRGQ--FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
Y +G+G L +K T + + I+ + + V ++ E+ +
Sbjct: 21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMV 178
H NIV + + + + ++ A G D +E A A + + ++
Sbjct: 80 SKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF--------KPGDVFKDL 230
+ Y H MG +HR +K + L S + + + ++ D K
Sbjct: 139 KALDYIHHMGYVHRSVKASHILISVDGK---VYLSGLRSNLSMISHGQRQRVVHDFPKYS 195
Query: 231 VGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPF------------------ 269
V +++PEVL++N Y A++DI+S G+ L +G PF
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP 255
Query: 270 ------------------WGETEQSIFDAILRGHIDFSSDPWPNI------SSSAKDIVK 305
+ D++ S+ P+ S V+
Sbjct: 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVE 315
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD--IAVLTRMKQFRAMNKLKKVALKVI 363
+ L +P R SA+ +LNH + + + + L + +T + F + +
Sbjct: 316 QCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGL 375
Query: 364 AENLSEEEI 372
NL E E+
Sbjct: 376 VTNLEELEV 384
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-40
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 345 RMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT 404
+ K + + +K L+EE+ ++E F DTD SGTI +ELK + LG
Sbjct: 4 KAKTVVSARRDQKKG----RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF 59
Query: 405 RLSESEVRQLMEAADVDGNGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
+ E+++++ D DG+GTID+ EF+T T M + E + KAF FD DNS
Sbjct: 60 EPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNS 115
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 6e-16
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ E S EEI + F+ D DNSGTIT ++L+ +LG L+E E+++++ AD +
Sbjct: 94 MGERDSREEI---LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRND 150
Query: 423 NGTIDYIEFIT 433
+ ID EFI
Sbjct: 151 DNEIDEDEFIR 161
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 5e-04
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L++V K + ENL+EEE+ +EM D ++ I +E
Sbjct: 123 LRRV-AKELGENLTEEEL---QEMIAEADRNDDNEIDEDE 158
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-40
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+++NL+EE+I KE F D DNSG+I+ EL + LG SE+EV LM DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
N I++ EF+ + + + E+ L +AF+ FDK+
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGD 98
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 69.8 bits (172), Expect = 2e-14
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SE+E+ E FK D + G I+ ELK L +G +L+++EV +++ DG+G I+
Sbjct: 82 SEQEL---LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEIN 137
Query: 428 YIEFIT 433
+F
Sbjct: 138 IKQFAA 143
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 1e-07
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
++ + + SE E + ++ +D D + I F E L +L SE E+ +
Sbjct: 34 ATVMRSLGLSPSEAE---VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90
Query: 416 EAADVDGNGTIDYIEF 431
+ D +G+G I E
Sbjct: 91 KVFDKNGDGLISAAEL 106
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 3e-40
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 42/285 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVE 132
+G G +G + +++T + A K + +L + D+ RE+ ++ L H+NIV
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV---RLDDDDEGVPSSALREICLLKELK-HKNIVR 65
Query: 133 LKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L + L+ + C + FD G + Q++ + +CHS V+
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRNYG 247
HRDLKP+N L + + E LK +FGL+ F P + V + +Y P+VL + Y
Sbjct: 124 HRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETE----QSIFDAI-------------LRGHIDFS 289
D+WSAG I L + G P F G + IF + L + +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 290 SDP--------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P P ++++ +D+++ +L +P +R+SA E L HP+
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 5e-40
Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 63/303 (20%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIM 121
TYI +LG G + Y K T A K I R + E+ REV ++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RLEHEEGAPCTAIREVSLL 54
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLC---------AGGELFDRIIAKGHYSERAAAN 172
L H NIV L S+ L+ + G + + K
Sbjct: 55 KDLK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVK---------L 104
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLV 231
Q++ + YCH V+HRDLKP+N L + E LK DFGL+ P + + V
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEV 161
Query: 232 GSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IF------- 278
+ +Y P++L +Y + D+W G I Y + +G P F G T + IF
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221
Query: 279 DAILRGHIDFS---------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ G + P + S D++ K+L + + R+SA + +
Sbjct: 222 EETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281
Query: 324 HPW 326
HP+
Sbjct: 282 HPF 284
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 6e-40
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 352 MNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESE 410
M+ + K E L+EE+ K F G+I+ +EL + LG + E
Sbjct: 1 MDDIYKA----AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHM----NRVEREEHLYKAFEYFDKDNS 459
++++++ D DG+GT+D+ EF+ + ++ + EE L F FDK+
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNAD 109
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 8e-16
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ SEEE L ++F+ D + G I EELK L G ++E ++ +LM+ D + +G
Sbjct: 90 KGKSEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 425 TIDYIEFIT 433
IDY EF+
Sbjct: 147 RIDYDEFLE 155
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 9e-04
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
LK + L+ E ++E++ ++E+ K D +N G I ++E
Sbjct: 117 LKIM-LQATGETITEDD---IEELMKDGDKNNDGRIDYDE 152
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-39
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 14/143 (9%)
Query: 331 GDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMG----LKEMFKSMDTDN 386
G K + K +K A + I + + E+ E+FK D +
Sbjct: 2 GACGSKGSTSDKGLASDKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNE 61
Query: 387 SGTITFEELKAGLPK-LGTRLSESEVRQLMEAA---------DVDGNGTIDYIEFITATM 436
+G + ++E+ +G + L S VR + + A ++ G+ D++EF+ +
Sbjct: 62 TGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRL 121
Query: 437 HMNRVEREEHLYKAFEYFDKDNS 459
+ + L F+ D +
Sbjct: 122 MLCYIYDFFELTVMFDEIDASGN 144
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 8e-15
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGT 425
E L MF +D + + EE K +PKL + L + D +G G+
Sbjct: 127 YDFFE---LTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGS 183
Query: 426 IDYIEFIT-ATMHMNRVEREEH 446
+ + EF A+ + +
Sbjct: 184 VTFDEFAAWASAVKLDADGDPD 205
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 1e-39
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
K +AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 421 DGNGTIDYIEFITATMH 437
D +GTIDY EFI AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 3e-39
Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTG 126
Y ++G G +GV Y + + FA K I +L D+ RE+ I+ L
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNN-YGETFALKKI---RLEKEDEGIPSTTIREISILKELK- 58
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
H NIV+L + + L+ + +L D +G A + Q++ + YC
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYC 116
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL- 242
H V+HRDLKP+N L + E LK DFGL+ F P + + + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI-------------LRG 284
+ Y DIWS G I +++G P F G +E IF + L
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 285 -HIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+F+ + S D++ KML DP +R++A + L H +
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 4e-39
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EE+ ++E F D D +GTI +ELK + LG + E+++++ D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 428 YIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
+ +F+T T M+ + +E + KAF+ FD D +
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDET 93
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 74.4 bits (184), Expect = 3e-16
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
++E ++EEI + FK D D +G I+F+ LK +LG L++ E++++++ AD DG
Sbjct: 72 MSEKDTKEEI---LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 128
Query: 423 NGTIDYIEFIT 433
+G + EF+
Sbjct: 129 DGEVSEQEFLR 139
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 50.9 bits (123), Expect = 5e-08
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
KVA++ + +EE +K+M +D + +G + F + L K+ + ++ E+ +
Sbjct: 29 KVAMRALGFEPKKEE---IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85
Query: 416 EAADVDGNGTIDYIEF 431
+ D D G I +
Sbjct: 86 KLFDDDETGKISFKNL 101
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 40.1 bits (95), Expect = 2e-04
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
LK+V K + ENL++EE+ +EM D D G ++ +E
Sbjct: 101 LKRV-AKELGENLTDEEL---QEMIDEADRDGDGEVSEQE 136
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 4e-39
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
NGTID+ EF+T M + EE + +AF FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 3e-23
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + SEEE ++E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG
Sbjct: 77 MKDTDSEEE---IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 423 NGTIDYIEFI---TATM-HMNRVEREEHLYKAFEYFDKDNS 459
+G ++Y EF+ TA R+E + K
Sbjct: 134 DGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMAR 174
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE----LKAGLPKLGTRLSESE 410
L+ V + + E L++EE+ EM + D D G + +EE + A G +
Sbjct: 106 LRHV-MTNLGEKLTDEEV---DEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEV 161
Query: 411 VRQLMEAADVDGNGTI 426
+R + A
Sbjct: 162 IRNKIRAIGKMARVFS 177
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 8e-39
Identities = 76/293 (25%), Positives = 118/293 (40%), Gaps = 43/293 (14%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHL 124
Y ++G G +GV Y + A K I +L D+ RE+ ++ L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRI---RLDAEDEGIPSTAIREISLLKEL 76
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVH 182
H NIV L + L+ + ++ D K + Q++ V
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVA 133
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
+CH ++HRDLKP+N L +S LK DFGL+ F P + V + +Y AP+V
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGA---LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI-------------L 282
L + Y DIWS G I +++G P F G T+ IF + L
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 283 RGHIDFSSDPW---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ + P D++ ML DP +R+SA + +NHP+
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-38
Identities = 75/300 (25%), Positives = 115/300 (38%), Gaps = 49/300 (16%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-----REVQIM 121
+ Y E+G G +G Y + A KS+ ++ N REV ++
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVALL 65
Query: 122 HHL--TGHRNIVELK-----GAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAAN 172
L H N+V L + V L+ + D+ G +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKD 124
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
L RQ + + + H+ ++HRDLKPEN L +S +K DFGL+ + +V
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALTPVVV 181
Query: 233 SAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID 287
+ +Y APEVL + Y D+WS G I + P F G +E IFD L G
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD--LIGLPP 239
Query: 288 ------FSSDPW---------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S P P + S ++ +ML +P +R+SA L H +
Sbjct: 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-38
Identities = 67/308 (21%), Positives = 121/308 (39%), Gaps = 61/308 (19%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
++ Y R+LGRG++ + + ++ + K++ + ++RE++I+ +
Sbjct: 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVV---V---KILKPVKKKKIKREIKILEN 86
Query: 124 LTGHRNIVELKGAYEDRHSVNLI--------MDLCAGGELFDRIIAKGHYSERAAANLCR 175
L G NI+ L +D S D ++ ++
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQT--LTDYDIRFYMY 137
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + L+ D+GL+ F+ PG + V S Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILR--------- 283
+ PE+L + Y D+WS G +L ++ P F G I +
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 284 --GHID----------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319
+ S+ +S A D + K+L D + RL+A
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 316 EAMEHPYF 323
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-38
Identities = 81/325 (24%), Positives = 120/325 (36%), Gaps = 55/325 (16%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN 107
S S + + + + R G+G FG L K T A K +
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV------- 56
Query: 108 RDDVEDVRREVQIMHHLT--GHRNIVELK-----GAYEDRHSV--NLIMDLCAGGELFDR 158
D RE+QIM L H NIV+L+ DR + N++M+ L
Sbjct: 57 IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRC 115
Query: 159 IIAKGHYSERAAANLCR----QMVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDSPLKA 212
L + Q++ + H S+ V HRD+KP N L + + D LK
Sbjct: 116 CRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKL 173
Query: 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFW 270
DFG + P + + S YY APE++ ++Y DIWS G I ++ G P F
Sbjct: 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
Query: 271 GETEQSIFDAILR---------------GHIDFS-----SDPW--------PNISSSAKD 302
G+ I+R H D PW + A D
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++ +L P+ER+ E L HP+
Sbjct: 294 LLSALLQYLPEERMKPYEALCHPYF 318
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 3e-38
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
+ +FK +D + G +++EE+KA + K +E ++ + ++ D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 435 TMHMNRV---EREEHLYKAFEYFDKDNS 459
+ + + L ++ D D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGD 89
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 2e-13
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ LK ++K MD D G +T EE+ + K G +V + + AD +G+G I
Sbjct: 73 DKIG---LKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYIT 125
Query: 428 YIEFIT 433
EF+
Sbjct: 126 LEEFLE 131
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 3e-38
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 25/270 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD----VEDVRREVQIMHHLTG 126
+ +++G+G FG+ + K A KS+ + ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCH 185
H NIV+L G + ++M+ G+L+ R++ K H L + + Y
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 186 SMG--VMHRDLKPENFLFSSSAEDSP--LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ ++HRDL+ N S E++P K DFGLS L+G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPET 197
Query: 242 LR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
+ +Y +AD +S +ILY +L+G PF + I + P I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR----PTIPE 253
Query: 299 SA----KDIVKKMLHADPKERLSAAEVLNH 324
+++++ DPK+R + ++
Sbjct: 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-38
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ +L EEI L+E F+ D D G I +L + +G +E E+ +L + +++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 423 NGTIDYIEFITATMHMNRVE-----REEHLYKAFEYFDKDNS 459
G +D+ +F+ E + L AF FD +
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGD 102
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 1e-14
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAADVDG 422
A+ + +E L++ F+ DT+ G I+ EL+ + LG ++ ++ +++ D++G
Sbjct: 82 ADMIGVKE---LRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNG 138
Query: 423 NGTIDYIEFIT 433
+G +D+ EF+
Sbjct: 139 DGRVDFEEFVR 149
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L++ ++ + +I +E+ + +D + G + FEE
Sbjct: 110 LREAMRALLGHQVGHRDI---EEIIRDVDLNGDGRVDFEE 146
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 4e-38
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++++ KE F+ D++ +G IT E L+ L + G R+ + ++ AD GNG I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 429 IEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
EF++ M + E+ L +AF FD + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGT 93
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 69.0 bits (170), Expect = 3e-14
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SE+ + ++ F++ D + +G I L+ L LG RL E + + + + G I
Sbjct: 77 SEDIL---RQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETE-KGQIR 132
Query: 428 YIEFIT 433
Y FI
Sbjct: 133 YDNFIN 138
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 3e-07
Identities = 19/76 (25%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
+ LK + EMF D +G I F E L ++ SE +RQ
Sbjct: 29 QTVLKQFGVRVEPAA---FNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF 85
Query: 416 EAADVDGNGTIDYIEF 431
D +G G I
Sbjct: 86 RTFDPEGTGYIPKAAL 101
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-38
Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 34/306 (11%)
Query: 42 PSSSATSATSSSVGRVLGKPMEDVRNTYI------FGRELGRGQFGVTYLVTHKDTKQQF 95
P + + ++ S R + ++ I G +G+G+FG Y +
Sbjct: 2 PEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH---GEV 58
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
A + I + N D ++ +REV H N+V GA + +I LC G L
Sbjct: 59 AIRLIDIERD-NEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 156 FDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214
+ + AK + +++V + Y H+ G++H+DLK +N + ++ + TD
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITD 172
Query: 215 FGLSVFFKP------GDVFKDLVGSAYYVAPEVLRRN----------YGAEADIWSAGVI 258
FGL D + G ++APE++R+ + +D+++ G I
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI 232
Query: 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSA 318
Y L + PF + ++I + G + + DI+ + +ER +
Sbjct: 233 WYELHAREWPFKTQPAEAIIWQMGTGMK--PNLSQIGMGKEISDILLFCWAFEQEERPTF 290
Query: 319 AEVLNH 324
++++
Sbjct: 291 TKLMDM 296
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 1e-37
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+GRG FGV + + A K ++ + + + E++ + + H NI
Sbjct: 12 VEEVVGRGAFGVVCKAKWRA--KDVAIK-----QIESESERKAFIVELRQLSRVN-HPNI 63
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSM 187
V+L GA + L+M+ GG L++ + +Y+ A + C Q V Y HSM
Sbjct: 64 VKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 188 ---GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HRDLKP N L + + LK DFG + + + GSA ++APEV
Sbjct: 122 QPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG 177
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWG--ETEQSIFDAILRGH---IDFSSDPWPNISS 298
+ Y + D++S G+IL+ +++ PF I A+ G + N+
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI------KNLPK 231
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNH 324
+ ++ + DP +R S E++
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVKI 257
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-37
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 425 TIDYIEFITATMHMNR----VEREEHLYKAFEYFDKDNS 459
TID+ EF+ + + + EE L F FDK+
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNAD 110
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 4e-16
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE L F+ D + G I EEL L G ++E ++ LM+ +D + +G ID
Sbjct: 94 SEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRID 150
Query: 428 YIEFIT 433
+ EF+
Sbjct: 151 FDEFLK 156
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 5e-04
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L ++ L+ E+++EE+ ++++ K D +N G I F+E
Sbjct: 118 LGEI-LRATGEHVTEED---IEDLMKDSDKNNDGRIDFDE 153
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 4e-37
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 364 AENLSEEEIMGLKEMFKSMDT-DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
LS ++ L+ F+ +T + SG ++ +++ L LG + ++S +RQL++ D G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 423 NGTIDYIEFITATM-----HMNRVEREEHLYKAFEYFDKDNS 459
NG ID+ F +N + ++ L +AF +DK+ +
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGN 105
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 2e-15
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
++E L+E F+ D + +G I+ + ++ L +L LS ++ +++ D DG+GT+D
Sbjct: 89 MQQE---LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVD 145
Query: 428 YIEFIT 433
+ EF+
Sbjct: 146 FEEFMG 151
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 4e-04
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
++++ L + E LS E+ L M +D D SGT+ FEE
Sbjct: 113 MREI-LAELDETLSSED---LDAMIDEIDADGSGTVDFEE 148
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-36
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 21/125 (16%)
Query: 356 KKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAG-----LPKLGTRLSESE 410
K A+K+ + + I K MF +D + +G IT +E+ + KL +++
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 411 VRQLMEAADVDGNGT-----IDYIEFIT-----ATMHMNRVEREEH------LYKAFEYF 454
Q+ A G G I + +F+ AT + + R E F+ F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 455 DKDNS 459
DKD S
Sbjct: 123 DKDGS 127
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 1e-16
Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L LK A N +F D D SGTIT +E KA G S+ +
Sbjct: 91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED 150
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMN 439
D+D G +D E H+
Sbjct: 151 CEATFRHCDLDNAGDLDVDEMT--RQHLG 177
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 8e-05
Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 13/121 (10%)
Query: 352 MNKLKKVALKVIAENLSEEEI--MGLKEMFKSMDTDNSGTITFEELKAGLPKLGT----- 404
++K + + + + ++ F+ + I F + G +L T
Sbjct: 43 VSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKK 102
Query: 405 --RLSESEVRQLMEAA----DVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458
R + +R+ +A D DG+GTI E+ +E F + D DN
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDN 162
Query: 459 S 459
+
Sbjct: 163 A 163
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 7e-36
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 64/326 (19%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D+ + Y+ + LG G G+ + D ++ A K I V+ RE++I+
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ---SVKHALREIKIIRR 64
Query: 124 LTGHRNIVELK--------------GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGH 164
L H NIV++ G+ + +SV ++ DL ++ +G
Sbjct: 65 L-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA-------NVLEQGP 116
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
E A Q++ + Y HS V+HRDLKP N ++ ED LK DFGL+ P
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPH 174
Query: 225 DVFKDL----VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE---- 274
K + + +Y +P +L NY D+W+AG I +L+G F G E
Sbjct: 175 YSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM 234
Query: 275 QSIFDAI------------------LRGHIDFSSDPW----PNISSSAKDIVKKMLHADP 312
Q I ++I +R + P P IS A D ++++L P
Sbjct: 235 QLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP 294
Query: 313 KERLSAAEVLNHPWMRVDGDASDKPL 338
+RL+A E L+HP+M + D+P+
Sbjct: 295 MDRLTAEEALSHPYMSIYSFPMDEPI 320
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 7e-36
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
GTID+ EF++ M + EE L +AF+ FD+D +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 97
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 2e-16
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ E SEEE+ E FK D D +G I+ EL+ + LG +L++ EV +++ AD+DG
Sbjct: 76 MKEQDSEEEL---IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 132
Query: 423 NGTIDYIEFIT 433
+G I+Y EF+
Sbjct: 133 DGHINYEEFVR 143
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 50.9 bits (123), Expect = 6e-08
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
++ + +N +E E L++M +D D +GTI F E L K+ + SE E+ +
Sbjct: 33 GTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAF 89
Query: 416 EAADVDGNGTIDYIEF 431
+ D DGNG I E
Sbjct: 90 KVFDRDGNGLISAAEL 105
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 39.0 bits (92), Expect = 8e-04
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L+ V + + E L+++E+ EM + D D G I +EE
Sbjct: 105 LRHV-MTNLGEKLTDDEV---DEMIREADIDGDGHINYEE 140
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-35
Identities = 72/307 (23%), Positives = 123/307 (40%), Gaps = 40/307 (13%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+VR Y + +G G +G T + A K + R + + RE++++ H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H N++ L + +++ D +++ E L QM+
Sbjct: 81 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ Y H+ G++HRDLKP N + D LK DFGL+ V + +Y AP
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNE---DCELKILDFGLARQADSE--MTGYVVTRWYRAP 194
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIF 278
EV+ Y DIWS G I+ +++G F G E Q +
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254
Query: 279 DAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+ ++ + N S A ++++KML D ++R++A E L HP+
Sbjct: 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314
Query: 331 GDASDKP 337
D D+P
Sbjct: 315 HDTEDEP 321
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-35
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 78/310 (25%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G+G FG + H+ T Q+ A K K++ ++ E RE++I+ L H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQLLK-HENV 78
Query: 131 VELKG--------AYEDRHSVNLIMDLC----AGGELFDRIIAKGHYSERAAANLCRQMV 178
V L + S+ L+ D C AG L + ++ + + ++
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNV--LVKFTLSEIKRVMQMLL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY--- 235
++Y H ++HRD+K N L + LK DFGL+ F + K+ + Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAF---SLAKNSQPNRYTNR 188
Query: 236 -----YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRG 284
Y PE+L R+YG D+W AG I+ + + P G TEQ I L G
Sbjct: 189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ--LCG 246
Query: 285 HIDFSSDPWPNISS----------------------------SAKDIVKKMLHADPKERL 316
I + + WPN+ + A D++ K+L DP +R+
Sbjct: 247 SI--TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 317 SAAEVLNHPW 326
+ + LNH +
Sbjct: 305 DSDDALNHDF 314
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 5e-35
Identities = 73/348 (20%), Positives = 125/348 (35%), Gaps = 86/348 (24%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI---SSRKLINRDDVEDVRREVQ 119
E Y G+ LG G FG+ V ++ ++FA K + K RE+
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----------RELD 52
Query: 120 IMHHLTGHRNIVELK--------------------------------------GAYEDRH 141
IM L H NI++L
Sbjct: 53 IMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNK 111
Query: 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVMHRDLKPE 197
+N+IM+ L + + NL Q+ V + HS+G+ HRD+KP+
Sbjct: 112 YLNVIMEYV-PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 198 NFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSA 255
N L +++D+ LK DFG + P + + S +Y APE++ Y D+WS
Sbjct: 171 NLLV--NSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 256 GVILYILLSGVPPFWGETE---------------QSIFDAILRGHIDFSSDPWPNIS--- 297
G + L+ G P F GET + + + +
Sbjct: 229 GCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK 288
Query: 298 -------SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
S A D+++++L +P R++ E + HP+ ++ + +
Sbjct: 289 ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 7e-35
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Query: 336 KPLDIAVL--TRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTD--NSGTIT 391
K L +VL + ++ L L S EI L E+FK + + + G I
Sbjct: 9 KHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLIN 68
Query: 392 FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKA 450
EE + L K + S ++ + D NG + + EF A ++ ++ ++ +
Sbjct: 69 KEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFS 127
Query: 451 FEYFDKDNS 459
F+ +D
Sbjct: 128 FQLYDLKQQ 136
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 1e-07
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL----KAGLPKLGTRLSESEVRQL 414
AL V N ++ + F+ D G I +E+ A L + G L ++ + +
Sbjct: 110 ALSVFHPNAPIDD--KIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDI 167
Query: 415 ----MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
E AD +G ID E+ + V R L K
Sbjct: 168 IDKTFEEADTKHDGKIDKEEWRSL------VLRHPSLLKNM 202
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 8e-35
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 46/310 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+V Y +G G +G T + A K +S R + + RE++++ H
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKH 84
Query: 124 LTGHRNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+ H N++ L + E+ + V L+ L G +L + I+ ++ L Q+
Sbjct: 85 MK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQI 141
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYY 236
+ + Y HS ++HRDLKP N + D LK DFGL+ + V + +Y
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNE---DCELKILDFGLA---RHTADEMTGYVATRWY 195
Query: 237 VAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQ 275
APE++ +Y DIWS G I+ LL+G F G E +
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255
Query: 276 SIFDAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
I R +I + + A D+++KML D +R++AA+ L H +
Sbjct: 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Query: 328 RVDGDASDKP 337
D D+P
Sbjct: 316 AQYHDPDDEP 325
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 9e-35
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 53/293 (18%)
Query: 75 LGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHL--TGHRN 129
+G G +G + K+ + A K + ++ ++ + REV ++ HL H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 130 IVELK-----GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+V L + + L+ DL D++ + ++ Q++
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDL---TTYLDKV-PEPGVPTETIKDMMFQLLR 131
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS V+HRDLKP+N L +SS + +K DFGL+ + +V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID------F 288
EVL + +Y D+WS G I + P F G ++ I D I G
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI--GLPGEEDWPRD 246
Query: 289 SSDPW---------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ P +I KD++ K L +P +R+SA L+HP+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-34
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 49/317 (15%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
V Y + +G G G+ ++ A K +S R N+ + RE+ +M
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKC 80
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H+NI+ L + + S+ D+ EL D ++I ER + L QM+
Sbjct: 81 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-YLLYQMLC 138
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS G++HRDLKP N + S LK DFGL+ + V + YY AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 240 EV-LRRNYGAEADIWSAGVILYILLSGVPPFWGE----------------TEQSI----- 277
EV L Y DIWS G I+ ++ G F G + +
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 278 ----------------FDAILRGHIDFSSDPWPNISSS-AKDIVKKMLHADPKERLSAAE 320
F+ + + + + +S A+D++ KML D +R+S E
Sbjct: 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 315
Query: 321 VLNHPWMRVDGDASDKP 337
L HP++ V D S+
Sbjct: 316 ALQHPYINVWYDPSEAE 332
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-34
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
++ TY+ +G G +G K + ++ A K +S R + + RE+ ++ H
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKH 79
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H N++ L + S+ D +I+ +SE L QM+
Sbjct: 80 MQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM-GLKFSEEKIQYLVYQMLK 137
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ Y HS GV+HRDLKP N + D LK DFGL+ V + +Y AP
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNE---DCELKILDFGLARHADAE--MTGYVVTRWYRAP 192
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIF 278
EV+ +Y DIWS G I+ +L+G F G E Q +
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252
Query: 279 DAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
D + +I + P S A D+++KML D +RL+AA+ L HP+
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312
Query: 331 GDASDKP 337
D ++
Sbjct: 313 RDPEEET 319
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-34
Identities = 76/317 (23%), Positives = 126/317 (39%), Gaps = 49/317 (15%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
V Y + +G G G+ + A K +S R N+ + RE+ +M
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKC 117
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H+NI+ L + + ++ D+ EL D ++I + + L QM+
Sbjct: 118 V-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSYLLYQMLC 175
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS G++HRDLKP N + S D LK DFGL+ + V + YY AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 240 EV-LRRNYGAEADIWSAGVILYILLSGVPPFWGE----------------TEQSI----- 277
EV L Y DIWS G I+ ++ F G + +
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 278 ----------------FDAILRGHIDFSSDPWPNISSS-AKDIVKKMLHADPKERLSAAE 320
F + + + + +S A+D++ KML DP +R+S +
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352
Query: 321 VLNHPWMRVDGDASDKP 337
L HP++ V D ++
Sbjct: 353 ALQHPYINVWYDPAEVE 369
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 3e-34
Identities = 82/320 (25%), Positives = 125/320 (39%), Gaps = 62/320 (19%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REVQI 120
DV Y +G G +G+ K + A K K+ + + RE++I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-----KISPFEHQTYCQRTLREIKI 78
Query: 121 MHHLTGHRNIVELK-----GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAA 170
+ H NI+ + E V ++ DL +++ H S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-------KLLKTQHLSNDHI 130
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
Q++ + Y HS V+HRDLKP N L ++ LK DFGL+ P
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGF 187
Query: 231 ----VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG------------- 271
V + +Y APE++ + Y DIWS G IL +LS P F G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 272 ------ETEQSIFDAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLS 317
E I + R ++ + PW PN S A D++ KML +P +R+
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
Query: 318 AAEVLNHPWMRVDGDASDKP 337
+ L HP++ D SD+P
Sbjct: 308 VEQALAHPYLEQYYDPSDEP 327
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 4e-34
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
++G G FG + A K + + + + V + REV IM L H NI
Sbjct: 41 IKEKIGAGSFGTVHRAEWHG--SDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNI 96
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRII---AKGHYSERAAANLCRQMVTVVHYCHSM 187
V GA +++++ + + G L+ + A+ ER ++ + ++Y H+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 188 G--VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HR+LK N L + +K DFGLS + K G+ ++APEVLR
Sbjct: 157 NPPIVHRNLKSPNLLVD---KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA--- 300
++D++S GVIL+ L + P+ + A+ I +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR------LEIPRNLNPQ 267
Query: 301 -KDIVKKMLHADPKERLSAAEVLNH 324
I++ +P +R S A +++
Sbjct: 268 VAAIIEGCWTNEPWKRPSFATIMDL 292
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 7e-34
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 21/266 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD-VEDVRREVQIMHHLTGHRN 129
+G G FG Y + A K+ + +E+VR+E ++ L H N
Sbjct: 11 LEEIIGIGGFGKVYRAFWIG--DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPN 67
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG- 188
I+ L+G ++ L+M+ GG L +++ N Q+ ++Y H
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 189 --VMHRDLKPENFLFSSSAEDSP-----LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
++HRDLK N L E+ LK TDFGL+ G+ ++APEV
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-REWHRTTKMSAAGAYAWMAPEV 185
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--DFSSDPWPNISS 298
+R + + +D+WS GV+L+ LL+G PF G ++ + + S
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPF-- 243
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNH 324
+++ + DP R S +L+
Sbjct: 244 --AKLMEDCWNPDPHSRPSFTNILDQ 267
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-33
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+D + + F A + + L ++ +K++F +D D SG I +
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 394 ELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
EL + L LS E + LM A D DG+G I EF T
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-08
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ LS ++++ + A + D+ +F M + + + + K F DKD S
Sbjct: 2 MTDLLSAEDIKKAIGAFTAAD--SFDHKKFFQ--MVGLKKKSADDVKKVFHILDKDKS 55
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
I G LG+G FG VTH++T + K + + + +EV++M L H N
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+++ G +N I + GG L I Y + + + + + Y HSM
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS---------------VFFKPGDVFKDLVGS 233
++HRDL N L E+ + DFGL+ + +VG+
Sbjct: 129 IIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 234 AYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPF 269
Y++APE++ R+Y + D++S G++L ++ V
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 3e-33
Identities = 65/319 (20%), Positives = 116/319 (36%), Gaps = 52/319 (16%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVR--- 115
+++ Y R + G +G A K + + R D +
Sbjct: 19 AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77
Query: 116 REVQIMHHLTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFDRIIAKGHY--SER 168
RE+++++H H NI+ L+ H + L+ +L +L ++I S +
Sbjct: 78 REIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTDL-AQVIHDQRIVISPQ 134
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
++ +H H GV+HRDL P N L + ++ + DF L+
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTADANKT 191
Query: 229 DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG--------------- 271
V +Y APE++ + + D+WSAG ++ + + F G
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251
Query: 272 ----ETEQSIFDAILRGHIDFS-----SDPW----PNISSSAKDIVKKMLHADPKERLSA 318
E R ++ S + W P A D++ KML +P+ R+S
Sbjct: 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311
Query: 319 AEVLNHPWMRVDGDASDKP 337
+ L HP+ D D
Sbjct: 312 EQALRHPYFESLFDPLDLT 330
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-33
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
+EI L + FK +D DNSG+++ EE + LP+L V+++++ D DGNG +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQ---QNPLVQRVIDIFDTDGNGEVDF 57
Query: 429 IEFITATMH-MNRVEREEHLYKAFEYFDKDNS 459
EFI + ++E+ L AF +D D
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKD 89
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-11
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQL----MEAADVDG 422
E++ L+ F+ D D G I+ EL L + G L +++++Q+ + AD DG
Sbjct: 73 KEQK---LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 129
Query: 423 NGTIDYIEFITATMHMN 439
+G I + EF ++
Sbjct: 130 DGRISFEEFCAVVGGLD 146
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 6e-04
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 355 LKKVALKVIAENLSEEEIMG-LKEMFKSMDTDNSGTITFEE 394
L +V ++ NL + ++ + + + D D G I+FEE
Sbjct: 97 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEE 137
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-33
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 37/309 (11%)
Query: 24 GPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVT 83
HH + G S S G G Y R +GRG G
Sbjct: 3 SSHHHHH----HSSGLVPRGSHMDGTAESREGTQFGP--------YRLRRLVGRGGMGDV 50
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143
Y ++ A K +S + ++RE + L ++V + E +
Sbjct: 51 YEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQL 109
Query: 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203
+ M L G +L + +G + A + RQ+ + + H+ G HRD+KPEN L S
Sbjct: 110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS- 168
Query: 204 SAEDSPLKATDFGL------SVFFKPGDVFKDLVGSAYYVAPEVLRRNY-GAEADIWSAG 256
D DFG+ + G+ VG+ YY+APE ++ ADI++
Sbjct: 169 --ADDFAYLVDFGIASATTDEKLTQLGNT----VGTLYYMAPERFSESHATYRADIYALT 222
Query: 257 VILYILLSGVPPFWGETEQSIFDAILRGHIDFS----SDPWPNISSSAKDIVKKMLHADP 312
+LY L+G PP+ G+ +++ HI+ + S P I + ++ + + +P
Sbjct: 223 CVLYECLTGSPPYQGDQL-----SVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNP 277
Query: 313 KER-LSAAE 320
++R ++ +
Sbjct: 278 EDRYVTCGD 286
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-33
Identities = 71/328 (21%), Positives = 114/328 (34%), Gaps = 71/328 (21%)
Query: 63 EDVRNTY-IFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVED-VRREV 118
E V + + G ++GRG +G Y KD + +A K I + RE+
Sbjct: 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI------EGTGISMSACREI 69
Query: 119 QIMHHLTGHRNIVELKGAYEDR--HSVNLIMD--------LCAGGELFDRIIAKGHYSER 168
++ L H N++ L+ + V L+ D +
Sbjct: 70 ALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLS-VFFKPGDV 226
+L Q++ +HY H+ V+HRDLKP N L + +K D G + +F P
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 227 FKDLVGSA---YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281
DL +Y APE+L R+Y DIW+ G I LL+ P F E
Sbjct: 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248
Query: 282 LRG----HI-------------DFSSDPW--------------------------PNISS 298
I D P S
Sbjct: 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDS 308
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPW 326
A +++K+L DP +R+++ + + P+
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPY 336
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 6e-33
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y A K ++ ++ + EV ++ H NI
Sbjct: 28 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNI 82
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G + ++ C G L+ + ++ + + ++ RQ + Y H+ +
Sbjct: 83 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLS---VFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED+ +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 142 IHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWP-NISSSA 300
Y ++D+++ G++LY L++G P+ I + + RG + N
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 301 KDIVKKMLHADPKERLSAAEVLNH 324
K ++ + L ER S +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAE 282
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 9e-33
Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 31/268 (11%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +L G + + K + R R D E + + H N+
Sbjct: 14 FLTKLNENHSGELWKGRWQG--NDIVVKVLKVRDWSTRK-SRDFNEECPRLRIFS-HPNV 69
Query: 131 VELKGAYEDRHSVNL--IMDLCAGGELFDRIIAKGHY--SERAAANLCRQMVTVVHYCHS 186
+ + GA + + + I G L++ + ++ + A M + + H+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 187 MG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
+ + L + + ED + + + F+ + + +VAPE L++
Sbjct: 130 LEPLIPRHALNSRSVMID---EDMTARISMADVKFSFQ----SPGRMYAPAWVAPEALQK 182
Query: 245 ----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI----LRGHIDFSSDPWPNI 296
AD+WS V+L+ L++ PF + I + LR I P P I
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI-----P-PGI 236
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324
S ++K ++ DP +R ++
Sbjct: 237 SPHVSKLMKICMNEDPAKRPKFDMIVPI 264
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-32
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 341 AVLTRMKQFRAMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTD--NSGTITFEELK 396
+++ K+ AM +++A + EE+ L E+FK + + + G I EE +
Sbjct: 3 CSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ 62
Query: 397 AGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFD 455
L + R ++ + DV NG I++ EF+ + + E + AF+ +D
Sbjct: 63 LALFRNRNR-RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYD 121
Query: 456 KDNS 459
+
Sbjct: 122 LRQT 125
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 5e-07
Identities = 26/101 (25%), Positives = 35/101 (34%), Gaps = 16/101 (15%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL----KAGLPKLGTRLSESEVRQL 414
+L V + E +K FK D +G I EEL A L + LSE + +
Sbjct: 99 SLGVFHPSAPVHE--KVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVM 156
Query: 415 ----MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
AD +G ID E+ V L K
Sbjct: 157 VDKAFVQADRKNDGKIDIDEWKDF------VSLNPSLIKNM 191
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 6e-32
Identities = 81/327 (24%), Positives = 131/327 (40%), Gaps = 68/327 (20%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REVQI 120
++ + + LG G +GV THK T + A K K+ D RE++I
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK-----KIEPFDKPLFALRTLREIKI 62
Query: 121 MHHLTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAA 171
+ H H NI+ + ++E+ + V +I EL R+I+ S+
Sbjct: 63 LKHFK-HENIITIFNIQRPDSFENFNEVYIIQ------ELMQTDLHRVISTQMLSDDHIQ 115
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDL 230
Q + V H V+HRDLKP N L +S + LK DFGL+ + + +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEP 172
Query: 231 VGSA----------YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGE------ 272
G +Y APEV+ Y D+WS G IL L P F G
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 273 ----------TEQSIFDAI--------LRGHIDFSSDPW----PNISSSAKDIVKKMLHA 310
+ I ++ + + P P ++ D++++ML
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF 292
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
DP +R++A E L HP+++ D +D+P
Sbjct: 293 DPAKRITAKEALEHPYLQTYHDPNDEP 319
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 6e-32
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+D + ++ +A + I+ +S++ LKE+F+ +D D SG I +
Sbjct: 3 TDILSPSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEED 61
Query: 394 ELKAGLPKLGT---RLSESEVRQLMEAADVDGNGTIDYIEFIT 433
ELK L + + L+ SE + + AAD DG+G I EF
Sbjct: 62 ELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 4e-09
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L LS S++ + D + +F + + L + F D D S
Sbjct: 2 LTDILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSK--KSSSQLKEIFRILDNDQS 55
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 5e-31
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 20/277 (7%)
Query: 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED 113
+G+++ Y +LG G YL + A K+I + ++
Sbjct: 5 IGKIIN-------ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR 57
Query: 114 VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
REV L+ H+NIV + E+ L+M+ G L + I + G S A N
Sbjct: 58 FEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LV 231
Q++ + + H M ++HRD+KP+N L + LK DFG++ + + ++
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGIAKALSETSLTQTNHVL 173
Query: 232 GSAYYVAPEVLRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-- 288
G+ Y +PE + DI+S G++LY +L G PPF GET SI AI
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPN 231
Query: 289 -SSDPWPNISSSAKDIVKKMLHADPKER-LSAAEVLN 323
++D +I S +++ + D R + E+ +
Sbjct: 232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 8e-31
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+D + +++ + + + LS+ +K++F+ +D D SG + +
Sbjct: 3 TDILSAEDIAAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 394 ELKAGLPKLGT---RLSESEVRQLMEAADVDGNGTIDYIEFIT 433
ELK L K + L+ESE + LM+AAD DG+G I EF
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQE 104
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-07
Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ LS ++ ++ T + +F T ++++ + + F + D D S
Sbjct: 2 ITDILSAEDIAAALQE--CQDPDTFEPQKFF-QTSGLSKMSASQ-VKDIFRFIDNDQS 55
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-30
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 365 ENLSEEEIMGLKEMFKS-MDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ + L+E +K ++ SGT+ E K + V + A D +G+
Sbjct: 14 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 73
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
TID++E++ A + R E L F+ +DKD +
Sbjct: 74 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRN 109
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-08
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 20/119 (16%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K KV + + + + MF++ DT+ TI F E A L + E +++ +
Sbjct: 46 KRFFKVPDNEEATQYV---EAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK 102
Query: 417 AADVDGNGTIDYIEFITATMHMNRVER-----------------EEHLYKAFEYFDKDN 458
D D NG ID E + + ++++ EE + + F D++
Sbjct: 103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENG 161
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 29/134 (21%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL-----------------P 400
AL ++ E + LK FK D D +G I +EL +
Sbjct: 83 AALNLVLRGTLEHK---LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139
Query: 401 KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNST 460
+ E V ++ D +G+G + EF+ R++ + K + D +
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG------ARRDKWVMKMLQM---DLNP 190
Query: 461 SQWKSWNMRLRSII 474
S W S R ++
Sbjct: 191 SSWISQQRRKSAMF 204
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-30
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEA 417
++ + + +E F M SG T E K L G + + + Q+
Sbjct: 8 SIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNT 65
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
D + +G +D++EFI A + + + E+ L F+ +D D +
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGN 107
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-08
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA------GLPKLGTRLSESEV 411
A+ +I + E++ LK FK D D +G+I EL L T E +
Sbjct: 81 AAVNLIMQEKMEQK---LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFI 137
Query: 412 RQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA-FEYFDKDN 458
+ D++ +G + EFI + +++ L + ++ FD N
Sbjct: 138 NLVFHKIDINNDGELTLEEFING------MAKDQDLLEIVYKSFDFSN 179
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-30
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA 418
A + L +++I +KE F +D D G ++ E++KA +LG + E+ +++
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK-- 61
Query: 419 DVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
+ G +++ F++ + ++ + EE + AF FD+ +
Sbjct: 62 --EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQET 101
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 72.5 bits (179), Expect = 2e-15
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
++ SEE I + F D + + E +K L +G ++ E+R + A V+G
Sbjct: 80 LSGTDSEETI---RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG 136
Query: 423 NGTIDYIEFITATMHMNR 440
G DY++F
Sbjct: 137 -GKFDYVKFTAMIKGSGE 153
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-30
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
Query: 333 ASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITF 392
+ L+ +V ++ ++ + + L +++E+ L FK+ SG +
Sbjct: 27 LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNE 84
Query: 393 EELKAGLPKLGTRLSESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
E K + + + L A D D NG + + +FI + R +E L AF
Sbjct: 85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAF 144
Query: 452 EYFDKDNS 459
+D +
Sbjct: 145 NLYDINKD 152
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 18/93 (19%)
Query: 375 LKEMFKSMDTDNSGTITFEEL------------KAGLPKLGTRLSESEVRQLMEAADVDG 422
L F D + G IT EE+ K P L V + D +
Sbjct: 140 LNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNK 199
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+G + EFI + +++E++ ++ + F+
Sbjct: 200 DGVVTIDEFIES------CQKDENIMRSMQLFE 226
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 7e-30
Identities = 77/352 (21%), Positives = 135/352 (38%), Gaps = 83/352 (23%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+ V Y ++LG+G +G+ + + T + A K I N D + RE+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREI 59
Query: 119 QIMHHLTGHRNIVELKGAY--EDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAAN 172
I+ L+GH NIV L ++ V L+ + + +I
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVF------DYMETDLHAVIRANILEPVHKQY 113
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+ Q++ V+ Y HS G++HRD+KP N L ++ + +K DFGLS F + +
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 233 SA----------------------YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPP 268
+ +Y APE+L Y D+WS G IL +L G P
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 269 FWGE----------------TEQSI--------------------------FDAILRGHI 286
F G + + + D +
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 287 DFSS-DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
+P + + A D++ K+L +P +R+SA + L HP++ + + +++P
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-29
Identities = 60/293 (20%), Positives = 109/293 (37%), Gaps = 42/293 (14%)
Query: 40 PRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKD-TKQQFACK 98
P S + + G ++ Y + G G YL ++ + K
Sbjct: 60 PYCGSPYSFLPQLNPGDIVA-------GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLK 112
Query: 99 SISSRKLINRDDVEDV---RREVQIMHHLTGHRNIVEL--KGAYEDRHSVN---LIMDLC 150
L++ D E E Q + + H +IV++ + DRH ++M+
Sbjct: 113 G-----LVHSGDAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYV 166
Query: 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210
G L A +++ + Y HS+G+++ DLKPEN + + + L
Sbjct: 167 GGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT----EEQL 220
Query: 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFW 270
K D G + F L G+ + APE++R DI++ G L L +P
Sbjct: 221 KLIDLGAV---SRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRN 277
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER-LSAAEVL 322
G + + DP S ++++ + DP++R +A E+
Sbjct: 278 GRYVDGLPE----------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-28
Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 20/119 (16%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE---------V 411
+ E+L + + L + F + D D+ G + +E+ ++ ++ ++ V
Sbjct: 24 QFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAV 83
Query: 412 RQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH-----------LYKAFEYFDKDNS 459
R V+ + +++ A ERE ++ D D
Sbjct: 84 RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGD 142
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 1e-13
Identities = 17/132 (12%), Positives = 47/132 (35%), Gaps = 10/132 (7%)
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR-AMNKLKKVALKV 362
++++++A ++ + + ++ + + L R + + A + +
Sbjct: 65 MRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNG------LLR-EDWVEANRVFAEAERER 117
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + +D D GT+ +ELK + + + E AD D
Sbjct: 118 ERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDK 175
Query: 423 NGTIDYIEFITA 434
+G ++ E +
Sbjct: 176 SGKLERTELVHL 187
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-28
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 349 FRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE 408
+ + L + EE+ L+ +F + D + SG + EE +A +L +
Sbjct: 3 HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60
Query: 409 SEVRQLMEAADVDGNGTIDYIEFIT 433
++ + + D D +G I + EF
Sbjct: 61 ADAEAVFQRLDADRDGAITFQEFAR 85
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 7e-28
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE+ +KE F DT+ +G+I + ELK + LG + + E+ +LM D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 427 DYIEFITATMHMNRVEREE 445
+ +F+ + +++ +
Sbjct: 61 GFDDFL--DIMTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 2e-05
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
KVA++ + ++ + EI E+ D + +G I F++
Sbjct: 30 KVAMRALGFDVKKPEI---LELMNEYDREGNGYIGFDD 64
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 9e-28
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A + ++I + +FK DT+ G I+ EL L LG ++ EVR++M D DG
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAF 451
+G I + EF + + K F
Sbjct: 60 DGFISFDEFT--DFARANRGLVKDVSKIF 86
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-27
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ E EI KE F +D + G I ++L+ +G ++E M +
Sbjct: 15 VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM---IKEA 71
Query: 423 NGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
+G I++ F+T + + E+ + AF+ D D
Sbjct: 72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGK 109
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-18
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ E+ I FK +D D G+I L+ L G R + E++ + A D
Sbjct: 88 LKGADPEDVI---MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDV 144
Query: 423 NGTIDYIEFITATMHMNRVERE 444
G +DY H E E
Sbjct: 145 AGNVDYKNICYVITHGEDAEGE 166
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 4e-04
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
L+++ L + EEI K M+ + D +G + ++ +
Sbjct: 117 LEEL-LTTGGGRFTPEEI---KNMWAAFPPDVAGNVDYKNICY 155
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 115 RREVQIMHHLTGHRNIV------ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER 168
RRE Q L H IV E + ++M+ G L D + +G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPY--IVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF- 227
A + +++ H G++HRD+KP N + S + +K DFG++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSV 173
Query: 228 ---KDLVGSAYYVAPEVLRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI-- 281
++G+A Y++PE R + A +D++S G +LY +L+G PPF G++ S+ A
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--AYQH 231
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER-LSAAEVLN 323
+R S +S+ +V K L +P+ R +AAE+
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-27
Identities = 64/325 (19%), Positives = 115/325 (35%), Gaps = 72/325 (22%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--- 125
YI R+LG G F +L A K + K E E++++ +
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDAD 76
Query: 126 -------GHRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGH--YSERAAAN 172
G +I++L + + ++ ++ G L I H
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ 135
Query: 173 LCRQMVTVVHYCHSM-GVMHRDLKPENFLFS---SSAEDSPLKATDFGLSVFFKPGDVFK 228
+ +Q++ + Y H G++H D+KPEN L S +K D G + + + +
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW--YDEHYT 193
Query: 229 DLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----------- 276
+ + + Y +PEV L +G ADIWS +++ L++G F + S
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 277 --------------------IFDAILRGHIDFSSDPWPNISSSAK-------------DI 303
F++ WP + D
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 304 VKKMLHADPKERLSAAEVLNHPWMR 328
+ ML DP++R A ++NHPW++
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLK 338
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-27
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-VRQLMEAADVDG 422
E LS E + F M SG +T E K S ++ V Q+ E D +
Sbjct: 8 VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+G ID++E++ A + + + ++ L F+ +D D +
Sbjct: 66 DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGN 102
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 9e-11
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K + + S + + ++MF++ D + G I F E A L + + ++R +
Sbjct: 38 KQFFGLKNLSPSANKYV--EQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFK 95
Query: 417 AADVDGNGTIDYIEF---ITATMHMNRVER----EEHLYKAFEYFDKDN 458
DVDGNG ID E I A +NR EE F+ D +
Sbjct: 96 LYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDING 144
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 6e-07
Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE------- 410
AL ++ + +++ L+ FK D D +G I EL + + +E
Sbjct: 76 AALSLVLKGKVDQK---LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEF 132
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMH----MNRVEREEHLYKAFEYFDKDNSTSQWKS 465
+ + D++G+G + EF+ ++ + R L + D
Sbjct: 133 TNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLDLTHIVKLIQNDGKNPHAPE 191
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-27
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 345 RMKQFRAMNKLKKVAL---KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
+ +Q ++++ K L K ++ ++ G KE + D + +G I LK L K
Sbjct: 1 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
LG + E+++L+ T Y +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-27
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
+ L E F+++DTD SG I+ EL A L G S + +L+ D + +G
Sbjct: 20 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 426 IDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
I + EF + + + F D
Sbjct: 80 ITFDEFKDLHHFIL------SMREGFRKRDSSGD 107
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 1e-20
Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I+ ++E F+ D+ G + E++A L G ++SE + LM D G++ + ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ ++ + R + F ++D++ +
Sbjct: 152 VELSIFVCR------VRNVFAFYDRERT 173
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-26
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
+ +FK +D + G +++EE+KA + K +E ++ + ++ D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 3e-09
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L + DV+G+G + Y E ++ E+ L F+ D D +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGN 50
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 4e-07
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
K + +E+ + + +FKS+D D +G I E
Sbjct: 23 KAFVSKKRAIKNEQLL---QLIFKSIDADGNGEIDQNEFAK 60
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-26
Identities = 57/297 (19%), Positives = 106/297 (35%), Gaps = 59/297 (19%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRN 129
+G+G++G + + + + A K SSR D + RE ++ + + H N
Sbjct: 12 LLECVGKGRYGEVWRGSWQG--ENVAVKIFSSR------DEKSWFRETELYNTVMLRHEN 63
Query: 130 IVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
I+ + D S + LI G L+D + + + + + + +
Sbjct: 64 ILGFIAS--DMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAH 120
Query: 184 CHS--------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----- 230
H + HRDLK +N L ++ D GL+V D+
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 231 VGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAIL 282
VG+ Y+APEVL + DIW+ G++L+ + + + F ++
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 283 RGHIDFSSD-----------PWPNISSSA------KDIVKKMLHADPKERLSAAEVL 322
F PN S ++K+ + +P RL+A +
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-26
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDY 428
+ L +F+ +D D SG I+ EL+ L T + VR ++ D + +++
Sbjct: 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 429 IEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
EF ++ F +D+DNS
Sbjct: 64 SEFTGVWKYITD------WQNVFRTYDRDNS 88
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 2e-21
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I + +F++ D DNSG I ELK L G RLS+ L+ D G G I + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
I + + R L F +D D
Sbjct: 133 IQGCIVLQR------LTDIFRRYDTDQD 154
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-26
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 16/108 (14%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--LSESEVRQLMEA-------- 417
S+ + +K F +D D G IT + ++ + + + LM++
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 418 -ADVDGNGTIDYIEFITATMHMNRVEREEHLYK-----AFEYFDKDNS 459
V G ID FI + M + + + + F D +
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNED 108
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 1e-13
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 14/132 (10%)
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDAS-DKPLDIAVLTRMKQFRAMNKLKKVALKV 362
K + + L W + K +D F + V
Sbjct: 35 FAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDET------TFINS-----MKEMV 83
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
L F+++DT+ I+ +E LG L ++ +A D +
Sbjct: 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNN 141
Query: 423 NGTIDYIEFITA 434
+G + EF+ A
Sbjct: 142 DGLLSLEEFVIA 153
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-26
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES------EVRQLMEAADV 420
S E++ D D SG + +EL+ + +L ++ E++ ++
Sbjct: 10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 421 DGNGTIDYIEFIT---------ATMHMNRVEREEHLYKAFEYFDKDNS 459
+G I +E +++ E K + +D D+S
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHS 117
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 91.9 bits (228), Expect = 4e-21
Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
+++++++L A K L + + + K + I L + + + L
Sbjct: 39 QNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGK-IGIVELAHVLP----TEENFLLL 93
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES--------EVR 412
+ S EE M + ++ DTD+SG I EELK L L + +++
Sbjct: 94 FRCQQLKSCEEFM---KTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTD 150
Query: 413 QLMEAADVDGNGTIDYIEFIT--------ATMHMNRVEREEHLYKAFEYFDKDNS 459
+++ D + +G ++ E + KAFE +D+D +
Sbjct: 151 LMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGN 205
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 4e-10
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%)
Query: 350 RAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES 409
R + + LK + +E + F+ D D +G I EL A L L + +
Sbjct: 171 RLLPVQENFLLKFQGIKMCGKE---FNKAFELYDQDGNGYIDENELDALLKDLCEKNKQE 227
Query: 410 EVRQLMEA-----ADVDGNGTIDYIEF 431
+ + G + +
Sbjct: 228 LDINNISTYKKNIMALSDGGKLYRTDL 254
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 5e-07
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 11/116 (9%)
Query: 350 RAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-------- 401
+ L + A K + + E M K D++N G + E+ LP
Sbjct: 127 NFLKDLLEKANKTVDDTKLAEYT---DLMLKLFDSNNDGKLELTEMARLLPVQENFLLKF 183
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKD 457
G ++ E + E D DGNG ID E + ++E + K+
Sbjct: 184 QGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKN 239
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 3e-26
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
E ++ G++ P + + R W+
Sbjct: 4 TKEAVKASD-----GNLLGDPGRIPLSKRESIKWQRPRFTRQALMR-----CCLIKWILS 53
Query: 330 DGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGT 389
+ L L ++ + +++E+ L FK+ +G
Sbjct: 54 SAAPQGSDSSDSELELSTVRHQPEGLDQLQAQ---TKFTKKELQSLYRGFKNEC--PTGL 108
Query: 390 ITFEELKAGLPKLGTRLSESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448
+ + K + + + L A D DGNG I + +F+ + R E L
Sbjct: 109 VDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLK 168
Query: 449 KAFEYFDKDNS 459
AF +D +
Sbjct: 169 WAFNLYDINKD 179
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 4e-07
Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 18/93 (19%)
Query: 375 LKEMFKSMDTDNSGTITFEEL----KAGLPKLGTRLSESE--------VRQLMEAADVDG 422
LK F D + G IT EE+ K+ +G V + + D +
Sbjct: 167 LKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQ 226
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+G + EF+ +++E++ + + F+
Sbjct: 227 DGVVTIDEFLET------CQKDENIMNSMQLFE 253
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 5e-26
Identities = 77/405 (19%), Positives = 132/405 (32%), Gaps = 113/405 (27%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK 92
+ ++ + + + Y +G G +G K K
Sbjct: 19 TVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEK 78
Query: 93 QQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVELK-----GAYEDRHSVNL 145
+ A K I + D ++ R RE+ I++ L H ++V++ E + +
Sbjct: 79 RVVAIKKIL---RVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 146 IMDLCAGGELFD----RIIAKGHY-SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200
++ E+ D ++ Y +E L ++ V Y HS G++HRDLKP N L
Sbjct: 135 VL------EIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL 188
Query: 201 FSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSA------------------------- 234
+ D +K DFGL+ P + L S
Sbjct: 189 VNQ---DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV 245
Query: 235 --YYVAPEVL--RRNYGAEADIWSAGVILYILL--------------------SGVPPFW 270
+Y APE++ + NY D+WS G I LL S P
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSP 305
Query: 271 GETEQSIFDAILRGHID-----F------SSDPWPNISSS-------------------- 299
+ + F RG+ D F S + +
Sbjct: 306 DQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365
Query: 300 -------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
A ++K+ML +P +R++ E L HP+ + A +
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVET 410
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 5e-26
Identities = 70/367 (19%), Positives = 129/367 (35%), Gaps = 107/367 (29%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIM 121
V + YI +GRG +G YL K+T++ A K ++ + D ++ R RE+ I+
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILREITIL 79
Query: 122 HHLTGHRNIVELK--------GAYEDRHSVNLIM--DLCAGGELFDRIIAKGHY-SERAA 170
+ L I+ L +++ + V I DL ++ + +E
Sbjct: 80 NRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLK-------KLFKTPIFLTEEHI 131
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD 229
+ ++ ++ H G++HRDLKP N L + D +K DFGL+ D
Sbjct: 132 KTILYNLLLGENFIHESGIIHRDLKPANCLLNQ---DCSVKVCDFGLARTINSEKDTNIV 188
Query: 230 LVGSA----------------------YYVAPEVL--RRNYGAEADIWSAGVILYILLS- 264
+Y APE++ + NY DIWS G I LL+
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248
Query: 265 ----------------GVPPFWGETEQSIFDAILRGHID-------------------FS 289
G F +++ + + D +
Sbjct: 249 LQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNIN 308
Query: 290 SD---------------PW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
P+IS ++++ ML +P +R++ + L+HP+++
Sbjct: 309 KPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368
Query: 331 GDASDKP 337
+
Sbjct: 369 RKKKLEN 375
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 5e-26
Identities = 41/295 (13%), Positives = 76/295 (25%), Gaps = 43/295 (14%)
Query: 32 LKIDPPGPPRPSSSATSATSSSV--GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHK 89
+ D P SSA V R+ Y G +
Sbjct: 1 IAFDALREPDRESSAPPDDVQLVPGARIAN-------GRYRLLIFHGGVPPLQFWQALDT 53
Query: 90 DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149
+Q A + + ++ D +++ + + + + R ++ +
Sbjct: 54 ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGGLVVAEW 112
Query: 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209
GG L + +A S A + + H GV P S
Sbjct: 113 IRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSID----- 165
Query: 210 LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPF 269
GDV ++ + + DI G LY LL P
Sbjct: 166 --------------GDV---VLAYPATMPDA------NPQDDIRGIGASLYALLVNRWPL 202
Query: 270 WGETEQSIFDAILRGHIDFSSDPW---PNISSSAKDIVKKMLHADPKERLSAAEV 321
+S R +P +I + + + D R ++ +
Sbjct: 203 PEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 9e-26
Identities = 63/341 (18%), Positives = 119/341 (34%), Gaps = 64/341 (18%)
Query: 35 DPPGPPRPSSSATSAT------SSSVGRVLGKPMEDVR---NTYIFGRELGRGQFGVTYL 85
+ P RP S + ++ G G P+ R T + +G+G+FG +
Sbjct: 1 EDPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWR 60
Query: 86 VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRNIVELKGAYEDRHSVN 144
+ ++ A K SSR + RE +I + H NI+ A +
Sbjct: 61 GKWRG--EEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112
Query: 145 ----LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------MGVMHR 192
L+ D G LFD + + + L + + + H + HR
Sbjct: 113 TQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLRRNYG 247
DLK +N L ++ D GL+V D+ VG+ Y+APEVL +
Sbjct: 172 DLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 228
Query: 248 AE-------ADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFSS--------- 290
+ ADI++ G++ + + + + + ++
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288
Query: 291 ------DPWPNISSSA--KDIVKKMLHADPKERLSAAEVLN 323
+ W + + I+++ +A+ RL+A +
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 99.9 bits (250), Expect = 3e-25
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ +I KE F +D + G I E+L L +G ++ + +M + G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56
Query: 427 DYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
++ F+T +N + E+ + AF FD++ S
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAS 90
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 2e-17
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
E+ I + F D + SG I + L+ L +G R ++ EV ++ A +D G +
Sbjct: 74 PEDVI---RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFN 130
Query: 428 YIEFITATMH 437
Y+EF H
Sbjct: 131 YVEFTRILKH 140
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 3e-04
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
L + +N ++E + + M ++ G I F L KL E +R
Sbjct: 30 HDMLASMGKNPTDEYL-------EGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAF 82
Query: 416 EAADVDGNGTIDYIEF 431
D + +G I
Sbjct: 83 ACFDEEASGFIHEDHL 98
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 4e-04
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L+++ L + + ++EE+ EM++ D G + E
Sbjct: 98 LREL-LTTMGDRFTDEEV---DEMYREAPIDKKGNFNYVE 133
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 6e-25
Identities = 67/332 (20%), Positives = 118/332 (35%), Gaps = 74/332 (22%)
Query: 63 EDVRNTYIFGRELGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ ++ Y LG G FG V + H K Q A K I + E R E+ ++
Sbjct: 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG----KYREAARLEINVL 70
Query: 122 HHL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANL 173
+ V + + + + +L G F+ + + ++ ++
Sbjct: 71 KKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE-FLKENNFQPYPLPHVRHM 128
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA----------------EDSPLKATDFGL 217
Q+ + + H + H DLKPEN LF +S +++ ++ DFG
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
+ F + +V + +Y PEV L + D+WS G IL+ G F +
Sbjct: 189 ATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
Query: 277 IFDAILR--GHID------------FSSD--PWPNISSSAK------------------- 301
+ + G I F W SS +
Sbjct: 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 306
Query: 302 -----DIVKKMLHADPKERLSAAEVLNHPWMR 328
D++++ML DP +R++ AE L HP+
Sbjct: 307 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 8e-25
Identities = 68/330 (20%), Positives = 116/330 (35%), Gaps = 73/330 (22%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ V Y + +G+G FG Q A K + + K E++I+
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILE 148
Query: 123 HL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLC 174
HL N++ + + R+ + + +L L++ +I K + S
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYE-LIKKNKFQGFSLPLVRKFA 206
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
++ + H ++H DLKPEN L S +K DFG S ++ V+ + S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQ-GRSGIKVIDFG-SSCYEHQRVYTYIQ-SR 263
Query: 235 YYVAPEV-LRRNYGAEADIWSAGVILYILLS---------------------GVPPFW-- 270
+Y APEV L YG D+WS G IL LL+ G+P
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 271 --GETEQSIFD--AILRGHIDFSSDPWPNISSSAK------------------------- 301
+ ++ R + + + +
Sbjct: 324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 302 ---DIVKKMLHADPKERLSAAEVLNHPWMR 328
D +K+ L DP R++ + L HPW+R
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 9e-25
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 21/122 (17%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQ 413
K+ ++ + I K MF +D +++G I+ +E+ LG +++ +
Sbjct: 2 NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61
Query: 414 LMEAADVDGNGT-----IDYIEFITATMHMNRVEREEH-----------LYKAFEYFDKD 457
A G G D+ +I + E E++ F+ DKD
Sbjct: 62 DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121
Query: 458 NS 459
+
Sbjct: 122 QN 123
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 5e-21
Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 10/159 (6%)
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQF-RAMNK 354
+ A DIV L A P++ + + G D + K
Sbjct: 38 MVYKASDIVINNLGATPEQA-KRHKDAVEAFFGGAGMKYGVETDW------PAYIEGWKK 90
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
L L+ A+N + +F +D D +G IT +E KA G S + +
Sbjct: 91 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEET 150
Query: 415 MEAADVDGNGTIDYIEFITATMH--MNRVEREEHLYKAF 451
D+D +G +D E + E LY
Sbjct: 151 FRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLYGGA 189
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 9e-06
Identities = 16/124 (12%), Positives = 29/124 (23%), Gaps = 19/124 (15%)
Query: 352 MNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGT-----ITFEE--------LKAG 398
+ K + + + + + + +G +
Sbjct: 39 VYKASDIVINNLGATPEQAK---RHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDE 95
Query: 399 LPKLGTRLSESEVRQLMEA---ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
L K D D NG I E+ T ++ E + F D
Sbjct: 96 LEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCD 155
Query: 456 KDNS 459
D S
Sbjct: 156 IDES 159
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 102 bits (254), Expect = 1e-24
Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 21/115 (18%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE----------VRQLM 415
+ + G ++++ D D++G I +EL + +L + + M
Sbjct: 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFM 63
Query: 416 EAADVDGNGTIDYIEF-----------ITATMHMNRVEREEHLYKAFEYFDKDNS 459
A D +G + E + ++ K + +D D+S
Sbjct: 64 SAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSS 118
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 78.6 bits (193), Expect = 1e-16
Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 26/179 (14%)
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
+ ++KK+ D ++ D + L I L M + +
Sbjct: 38 RHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGR-LQIEELANM--ILPQEENFLLIF 94
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES--------EVR 412
+ A + E M ++++ D D+SG I+ ELK L L + +
Sbjct: 95 RREAPLDNSVEFM---KIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTD 151
Query: 413 QLMEAADVDGNGTIDYIEFIT------------ATMHMNRVEREEHLYKAFEYFDKDNS 459
+M+ D + +G +D + ++VER+ K F ++D +
Sbjct: 152 AMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 9e-09
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 11/87 (12%)
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES--- 409
N L + + ++ + + +++F D +G + E+ + + + S
Sbjct: 179 NFLLQFKMDASSQVERKRD---FEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISG 235
Query: 410 -----EVRQLMEAADVDGNGTIDYIEF 431
L+ D++ +G I E
Sbjct: 236 GDLDKFRECLLTHCDMNKDGKIQKSEL 262
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 2e-06
Identities = 16/129 (12%), Positives = 34/129 (26%), Gaps = 23/129 (17%)
Query: 350 RAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLP--------- 400
+ L K I N +E M K D + G + +L L
Sbjct: 128 NFLKDLFLQHKKKIPPNKLDEYT---DAMMKIFDKNKDGRLDLNDLARILALQENFLLQF 184
Query: 401 ---KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA--------TMHMNRVEREEHLYK 449
+ + ++ DV G ++ E ++ + ++
Sbjct: 185 KMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFREC 244
Query: 450 AFEYFDKDN 458
+ D +
Sbjct: 245 LLTHCDMNK 253
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 3e-24
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 353 NKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+KL+ ++ + E + +E EI + F SG ++ EE K S+
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 411 -VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ D +G+GTID+ EFI A +R + E+ L AF +D D +
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGN 113
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 3e-06
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 21/108 (19%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELK------AGLPKLGTRLSESE- 410
+AL V + E++ LK F D D +G I+ E+ + ++ E E
Sbjct: 87 IALSVTSRGKLEQK---LKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 143
Query: 411 -----VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453
++ D + +G + EFI + + + + +
Sbjct: 144 TPEKRTEKIFRQMDTNRDGKLSLEEFIRG------AKSDPSIVRLLQC 185
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 3e-24
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 343 LTRMKQFRAMNKLKKVAL---KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
+ + +Q R + ++ + L K E E++ KE + D +N G I LK +
Sbjct: 17 ILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM 76
Query: 400 PKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
KLG + E+++++ + TI Y +F ++M +R L K F+ +
Sbjct: 77 EKLGVPKTHLEMKKMISEVTGGVSDTISYRDF----VNMMLGKRSAVL-KLVMMFEGKAN 131
Query: 460 TSQWK 464
S K
Sbjct: 132 ESSPK 136
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 4e-24
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 350 RAMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS 407
++ +KL + L+ + ++E+ + F SG + E + +
Sbjct: 3 KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGFF--KDCPSGHLNKSEFQKIYKQFFPFGD 60
Query: 408 ESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
S + D D NG ID+ EFI A +R E + L AF+ +D DN+
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNN 113
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 7e-08
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 21/111 (18%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA------GLPKLGTRLSESE- 410
AL V + ++ L F+ D DN+G I+++E+ + +L E E
Sbjct: 87 CALSVTSRGELNDK---LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDED 143
Query: 411 -----VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
V ++ D + +G + EF +R+ + A +D
Sbjct: 144 TPEKRVNKIFNMMDKNKDGQLTLEEFCEG------SKRDPTIVSALSLYDG 188
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-24
Identities = 69/334 (20%), Positives = 110/334 (32%), Gaps = 74/334 (22%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ N ++ R++G G FG L H D K+ +A K + + K + E I+
Sbjct: 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK----KYTRSAKIEADILK 86
Query: 123 HL----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQ 176
+ + NIV+ G + + LI + G L++ I + + C +
Sbjct: 87 KIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIE 145
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV----- 231
++ ++Y M + H DLKPEN L + L K
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205
Query: 232 -GSA--------------YYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
G A Y APEV L + +D+WS G +L L +G F
Sbjct: 206 FGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
Query: 276 SIFDAILR--GHID---------------FSSDP----WPNISSSAK------------- 301
+ I + D WP +SS
Sbjct: 266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325
Query: 302 --------DIVKKMLHADPKERLSAAEVLNHPWM 327
D + +L DP R S AE+L H ++
Sbjct: 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 6e-24
Identities = 65/332 (19%), Positives = 115/332 (34%), Gaps = 59/332 (17%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYI-FGRELGRGQFGVTYLVTHKDTKQQ 94
PPG S +S S G L ++ I +++G+G++G ++ + ++
Sbjct: 6 PPGESLRDLIEQSQSSGS-GSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRG--EK 62
Query: 95 FACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRNIVELKGAYEDRHSVN----LIMDL 149
A K + + RE +I L H NI+ A LI D
Sbjct: 63 VAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116
Query: 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------MGVMHRDLKPENFLF 201
G L+D + ++ L V+ + + H+ + HRDLK +N L
Sbjct: 117 HENGSLYD-YLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175
Query: 202 SSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLRRNYGAE------- 249
++ D GL+V F D+ VG+ Y+ PEVL +
Sbjct: 176 K---KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIM 232
Query: 250 ADIWSAGVILYILLSGV----------PPFWGET-EQSIFDAI--------LRGHIDFSS 290
AD++S G+IL+ + P+ ++ + LR +
Sbjct: 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP-NR 291
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
++ + +P RL+A V
Sbjct: 292 WSSDECLRQMGKLMTECWAHNPASRLTALRVK 323
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 2e-23
Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 5/138 (3%)
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
K + + ++ +NK K + ++ K + D + +G I L
Sbjct: 11 KAFGLLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSL 70
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
K L KLG + E+++L+ T Y +F + M +R L + ++
Sbjct: 71 KRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDF----LRMMLGKRSAIL-RMILMYE 125
Query: 456 KDNSTSQWKSWNMRLRSI 473
+ N + + ++I
Sbjct: 126 EKNKEHKRPTGPPAKKAI 143
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 3e-23
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 22/128 (17%)
Query: 350 RAMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS 407
RA L+ L+ I + S +I L F S+D +GT++ E+ + L
Sbjct: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE----------------REEHLYKAF 451
+ +++ A +G +++ F+ H +E R L+ AF
Sbjct: 64 D----RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 452 EYFDKDNS 459
+D D
Sbjct: 120 RLYDLDKD 127
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-09
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 343 LTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402
+ + FR + +K E L+ L F+ D D I+ +EL L +
Sbjct: 84 MRTLAHFRPIEDNEKSKDVNGPEPLNSRS-NKLHFAFRLYDLDKDDKISRDELLQVLRMM 142
Query: 403 -GTRLSESEVRQL----MEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447
G +S+ ++ + ++ AD DG+ I + EF+ + +V+ E+ +
Sbjct: 143 VGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV---LEKVDVEQKM 189
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 3e-23
Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 18/116 (15%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVD 421
EE+ + +F + D+ ++ EL L K+ TR R ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477
G + + EF ++ ++ FD D S + S L
Sbjct: 60 TTGKLGFEEFKYLWNNIK------KWQAIYKQFDVDRSGTIGSS---ELPGAFEAA 106
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 9e-21
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
I + ++K D D SGTI EL G L+E + ++ D G +D+
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSMIIRRYSDEGGNMDFD 132
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNS 459
FI+ + + + +++AF+ DKD +
Sbjct: 133 NFISCLVRL------DAMFRAFKSLDKDGT 156
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 4e-23
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 41/277 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ G ++GRG FG + + A KS R+ + D +E +I+ +
Sbjct: 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS 170
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----AANLCRQMVTV 180
H NIV L G + + ++M+L GG+ + +G + M
Sbjct: 171 -HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME-- 227
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
Y S +HRDL N L + E + LK +DFG+S ++ Y
Sbjct: 228 --YLESKCCIHRDLAARNCLVT---EKNVLKISDFGMS---------REEADGVYAASGG 273
Query: 238 ---------APEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHI 286
APE L Y +E+D+WS G++L+ G P+ + Q + + +G
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR 333
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ ++++ +P +R S + +
Sbjct: 334 ---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 4e-23
Identities = 76/329 (23%), Positives = 120/329 (36%), Gaps = 72/329 (21%)
Query: 63 EDVRNTYIFGRELGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + Y LG G FG V + HK + A K + + E R E+Q++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVL 65
Query: 122 HHL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLC 174
HL V++ +E + ++ +L G +D I G + +
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSA----------------EDSPLKATDFGLS 218
Q+ V++ HS + H DLKPEN LF S + +K DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 219 VFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ + LV + +Y APEV L + D+WS G IL G F +
Sbjct: 185 TY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 278 FDAILR--GHID------------FSSD--PWPNISSSAK-------------------- 301
+ R G + F D W SS+ +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 302 ----DIVKKMLHADPKERLSAAEVLNHPW 326
D+++KML DP +R++ E L HP+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPF 331
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 99.6 bits (248), Expect = 6e-23
Identities = 67/375 (17%), Positives = 118/375 (31%), Gaps = 114/375 (30%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K + Y R+LG G F +L K+ A K + S E E++
Sbjct: 30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS----AEHYTETALDEIR 85
Query: 120 IMHHLT-------GHRNIVELKGAYE-----DRHSVNLIMDLCAGGELFDRIIAKGH--Y 165
++ + +V+L ++ H ++ ++ G L II +
Sbjct: 86 LLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC-MVFEV-LGHHLLKWIIKSNYQGL 143
Query: 166 SERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSS-------------------- 204
+ +Q++ + Y H+ ++H D+KPEN L S +
Sbjct: 144 PLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAP 203
Query: 205 --------------------------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
AE +K D G + + F + + + Y +
Sbjct: 204 PPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTEDIQTRQYRS 261
Query: 239 PEV-LRRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHID-------- 287
EV + Y ADIWS + + L +G F E + + + I+
Sbjct: 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 321
Query: 288 -----------FSSD----------PWPNISSSAK-------------DIVKKMLHADPK 313
F+ PW + D + ML P+
Sbjct: 322 LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPE 381
Query: 314 ERLSAAEVLNHPWMR 328
+R +AAE L HPW+
Sbjct: 382 KRATAAECLRHPWLN 396
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-22
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V Y GR +G G FGV + T+ QQ A K R D +R E + L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP-----RRSDAPQLRDEYRTYKLL 62
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD-RIIAKGHYSERAAANLCRQMVTVVH 182
G I + E H+V L++DL G L D + +S + A +QM+ V
Sbjct: 63 AGCTGIPNVYYFGQEGLHNV-LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQ 120
Query: 183 YCHSMGVMHRDLKPENFLF--SSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVG 232
H +++RD+KP+NFL +S + + DFG+ F++ P K+L G
Sbjct: 121 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 180
Query: 233 SAYYVAPEVLRRNYGAEA----DIWSAGVILYILLSGVPPFW 270
+A Y++ + + G E D+ + G + L G P W
Sbjct: 181 TARYMS---INTHLGREQSRRDDLEALGHVFMYFLRGSLP-W 218
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 1e-22
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 356 KKVALKVIAENLSE---EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
A + I L + + + F++ DT + TI+ EE +A + L++ +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFD 63
Query: 413 QLMEAADVDGNGTIDYIEFITA 434
+L V+ G + Y +F++
Sbjct: 64 RLWNEMPVNAKGRLKYPDFLSR 85
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 99.3 bits (247), Expect = 1e-22
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V N + GR++G G FG YL T+ T ++ A K + + + E +I L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN-----VKTKHPQLLYESKIYRIL 59
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAG---GELFDRIIAKGHYSERAAANLCRQMVTV 180
G I ++ E ++V L+MDL G +LF+ S + L QM+
Sbjct: 60 QGGTGIPNVRWFGVEGDYNV-LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINR 115
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVG 232
V + HS +HRD+KP+NFL + + DFGL+ ++ P K+L G
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 233 SAYYVAPEVLRRNYGAEA----DIWSAGVILYILLSGVPPFW 270
+A Y + + + G E D+ S G +L L G P W
Sbjct: 176 TARYAS---VNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-W 213
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 2e-22
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
K +F+ D + G ++ +E + ++ ++ + E DVDGNG ++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 435 TMHM 438
M
Sbjct: 63 IEKM 66
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-05
Identities = 7/38 (18%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
+ + ++E+I + F+ +D D +G + +E
Sbjct: 24 REVALAFSPYFTQEDI---VKFFEEIDVDGNGELNADE 58
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-22
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V N Y GR++G G FG YL T ++ A K + + E +I +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-----VKTKHPQLHIESKIYKMM 61
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD-RIIAKGHYSERAAANLCRQMVTVVH 182
G I ++ E ++V ++M+L G L D +S + L QM++ +
Sbjct: 62 QGGVGIPTIRWCGAEGDYNV-MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIE 119
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVGSA 234
Y HS +HRD+KP+NFL + + + DFGL+ ++ P K+L G+A
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 179
Query: 235 YYVAPEVLRRNYGAEA----DIWSAG-VILYILLSGVP 267
Y + + + G E D+ S G V++Y L +P
Sbjct: 180 RYAS---INTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 3e-22
Identities = 60/296 (20%), Positives = 101/296 (34%), Gaps = 57/296 (19%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
RG+FG + + + A K + EV + + H NI
Sbjct: 28 LLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQD----KQSWQNEYEVYSLPGMK-HENI 80
Query: 131 VELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
++ GA ++ + LI G L D + S ++ M + Y
Sbjct: 81 LQFIGA--EKRGTSVDVDLWLITAFHEKGSLSD-FLKANVVSWNELCHIAETMARGLAYL 137
Query: 185 HSM----------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD---LV 231
H + HRD+K +N L + DFGL++ F+ G D V
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 232 GSAYYVAPEVLRRNYGAE------ADIWSAGVILYILLSGVPPFWGETE--QSIFDAILR 283
G+ Y+APEVL + D+++ G++L+ L S G + F+ +
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254
Query: 284 GHIDFSS---------------DPWPNISSSAK--DIVKKMLHADPKERLSAAEVL 322
H D W + A + +++ D + RLSA V
Sbjct: 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 3e-22
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 23/115 (20%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQLMEA------ 417
+ LK+ F D D +G + + + + G +EV+ L A
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 418 -----ADVDGNGTIDYIEFITATMHMNRVEREEH--------LYKAFEYFDKDNS 459
A V +G++ +FI T ++ + E + DK+
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNAD 116
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 7e-14
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ + +K + D + G I +E A L LG +S++E + D +GNG
Sbjct: 94 ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151
Query: 425 TIDYIEFITA 434
+ E +TA
Sbjct: 152 ELSLDELLTA 161
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 4e-08
Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 18/122 (14%)
Query: 353 NKLKKVALKVIAENLSEEEIMGLKE--------MFKSMDTDNSGTITFEELKAGLPKLGT 404
K + + ++ E+ LK + K + G++T E+ L
Sbjct: 30 EKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIF 89
Query: 405 RLSESE----VRQLMEAA----DVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
E+ + +++ D + +G I+ EF + + +AF D
Sbjct: 90 EQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDT 147
Query: 457 DN 458
+
Sbjct: 148 NG 149
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 4e-22
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + LG G FG ++ + K A K + R+ + +++ E +M
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVM 71
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ + ++ L G +V LI L G L D + K + + N C Q+
Sbjct: 72 ASVD-NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
++Y ++HRDL N L + +K TDFGL+ + Y
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKT---PQHVKITDFGLAKLLGAEE--------KEYHAEG 178
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
A E + R Y ++D+WS GV ++ L++ G P+ G I + +G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 6e-22
Identities = 20/114 (17%), Positives = 33/114 (28%), Gaps = 25/114 (21%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEV---------------R 412
E + F + D D +G I + + + +
Sbjct: 2 YERR---IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQ 58
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREE-------HLYKAFEYFDKDNS 459
L AD DG+ I EF+T + R + + L+ A D D
Sbjct: 59 GLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGD 112
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 6e-14
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ +E L DTD G +T + L G + E RQ A D DG+G
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDG 147
Query: 425 TIDYIEFITA 434
+ E + A
Sbjct: 148 KVGETEIVPA 157
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 9e-22
Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 21/111 (18%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
S+ ++ L F+++D + G ++ +L+ + L +++E+ DG+
Sbjct: 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-IGALA---VNPLGDRIIESFFPDGSQR 77
Query: 426 IDYIEFITATMHMNRVE-----------------REEHLYKAFEYFDKDNS 459
+D+ F+ H VE R L+ AF+ +D D
Sbjct: 78 VDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRD 128
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 3e-12
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 343 LTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402
+ + FR + L F+ D D G I+ E+ L +
Sbjct: 84 VRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143
Query: 403 -GTRLSESEVRQL----MEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447
G +++E ++ + ++ AD DG+G + ++EF + M+ VE++ +
Sbjct: 144 VGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD-VEQKMSI 192
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 1e-21
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 27/220 (12%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + G+++G G FG L + T + A K + K + E + L
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMK----SRAPQLHLEYRFYKQL 61
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD-RIIAKGHYSERAAANLCRQMVTVVH 182
I ++ +++ ++++L G L D + +S + + Q+++ +
Sbjct: 62 GSGDGIPQVYYFGPCGKYNA-MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 119
Query: 183 YCHSMGVMHRDLKPENFLF--SSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVG 232
Y HS +++RD+KPENFL + + DF L+ + P K L G
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG 179
Query: 233 SAYYVAPEVLRRNYGAEA----DIWSAG-VILYILLSGVP 267
+A Y++ + + G E D+ + G + +Y L +P
Sbjct: 180 TARYMS---INTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 4e-21
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 20/238 (8%)
Query: 59 GKPMEDV----RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
G P D R +LG GQ+G Y K A K++ + +VE+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEF 56
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAAN 172
+E +M + H N+V+L G +I + G L D R + S
Sbjct: 57 LKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+ Q+ + + Y +HRDL N L E+ +K DFGLS GD + G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAG 171
Query: 233 SAYYV---APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ + + APE L + ++D+W+ GV+L+ + + G+ P+ G +++ + + +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 8e-21
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 425 TIDYIEFITATMHMNRVEREE 445
TID+ EF+ M R +E+
Sbjct: 72 TIDFEEFLVM---MVRQMKED 89
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 1e-20
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 18/223 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
E + Y +G+G FG + ++ A K I ++K + EV+++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ----AQIEVRLLE 105
Query: 123 HL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCR 175
+ IV LK + R+ + L+ ++ L+D + S +
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 176 QMVTVVHYCHS--MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
QM T + + + + ++H DLKPEN L + + S +K DFG S +++ + S
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNP-KRSAIKIVDFG-SSCQLGQRIYQYIQ-S 221
Query: 234 AYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
+Y +PEV L Y D+WS G IL + +G P F G E
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-20
Identities = 65/302 (21%), Positives = 114/302 (37%), Gaps = 42/302 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R R LG G FG Y + + + Q A K++ ++ + D D E I
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALI 86
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
+ H+NIV G ++M+L AGG+L + + ++ ++ V
Sbjct: 87 ISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 181 V-------HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Y +HRD+ N L + K DFG++ +D+ +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRA 196
Query: 234 AYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
+YY PE + ++ D WS GV+L+ + S G P+ ++ Q + +
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH-PWMRVDGDASDKPL 338
+ G DP N I+ + P++R + A +L + D D + L
Sbjct: 257 FVTSGGR---MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 313
Query: 339 DI 340
I
Sbjct: 314 PI 315
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 1e-20
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 425 TIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
TID+ EF+T M + EE + +AF FDKD +
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 399
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 76.1 bits (187), Expect = 5e-15
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG
Sbjct: 378 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 434
Query: 423 NGTIDYIEFIT 433
+G ++Y EF+
Sbjct: 435 DGQVNYEEFVQ 445
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 7e-07
Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 7/93 (7%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
G + D+ T E+K L R+ + D +G I
Sbjct: 241 FKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGI-------DFKEDGNI 293
Query: 427 DYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ T E+ +AF FDKD
Sbjct: 294 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGD 326
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
++ + +N +E E L++M +D D +GTI F E L K+ SE E+R+
Sbjct: 335 GTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 391
Query: 416 EAADVDGNGTIDYIEF 431
D DGNG I E
Sbjct: 392 RVFDKDGNGYISAAEL 407
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 1e-20
Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
EE++ + + G I+ + KLG S + +++ E +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKE----LYGDNL 64
Query: 427 DYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
Y +++ ++ ++ + E L K F +FD + +
Sbjct: 65 TYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCT 98
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 7e-15
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ EE++ +MF D + +G +T ++K L G L++ E + A + N ID
Sbjct: 82 NVEELI---KMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDN--ID 136
Query: 428 YIEFITATMH 437
Y F +
Sbjct: 137 YKLFCEDILQ 146
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 3e-04
Identities = 8/83 (9%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
+ + S + K + +T+E+ L+ + + + E+ ++
Sbjct: 38 SYNARKLGLAPSSIDE-------KKIKELYGDNLTYEQYLEYLSICVHDKDNVEELIKMF 90
Query: 416 EAADVDGNGTIDYIEFITATMHM 438
D + G + +
Sbjct: 91 AHFDNNCTGYLTKSQMKNILTTW 113
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-20
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
++ + LKE FK D D +G I+ EL+ + LG +L++ EV Q+++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 426 IDYIEFI---TATMHMNRVEREEHLYKAF 451
++Y EF+ L + F
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWSRLRRKF 90
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
+ + + E L++EE+ ++M K D D G + +EE + + + +L
Sbjct: 32 RHVMINLGEKLTDEEV---EQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRLRR 88
Query: 417 A 417
Sbjct: 89 K 89
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 33/238 (13%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + LG G FG ++ + K A K + R+ + +++ E +M
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVM 71
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ + ++ L G +V LI L G L D + K + + N C Q+
Sbjct: 72 ASVD-NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
++Y ++HRDL N L +K TDFGL+ + Y
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEE--------KEYHAEG 178
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
A E + R Y ++D+WS GV ++ L++ G P+ G I + +G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 2e-20
Identities = 73/316 (23%), Positives = 113/316 (35%), Gaps = 40/316 (12%)
Query: 21 PDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDV----RNTYIFGRELG 76
+ P N + S + A P R GR +G
Sbjct: 340 LPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIG 399
Query: 77 RGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
GQFG + ++ ++ A K+ + + E +E M H +IV+L
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTC--KNCTSDSVREKFLQEALTMRQFD-HPHIVKL 456
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G + V +IM+LC GEL + K + Q+ T + Y S +HR
Sbjct: 457 IGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-----------APEV 241
D+ N L S + +K DFGLS + + S YY APE
Sbjct: 516 DIAARNVLVS---SNDCVKLGDFGLS---------RYMEDSTYYKASKGKLPIKWMAPES 563
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ R + + +D+W GV ++ +L GV PF G + I G PN +
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER---LPMPPNCPPT 620
Query: 300 AKDIVKKMLHADPKER 315
++ K DP R
Sbjct: 621 LYSLMTKCWAYDPSRR 636
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 2e-20
Identities = 13/113 (11%), Positives = 30/113 (26%), Gaps = 16/113 (14%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES---------EVRQ 413
I E+ + +K + +D G I+ E+ + ++ S E +
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 414 LMEAADVDGNGTIDYIEFITATMHM-------NRVEREEHLYKAFEYFDKDNS 459
+ + + I E + ++ D D
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKD 116
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 2e-16
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++ M+ +DTD G ++ E KA L +G L++ + D + NG I
Sbjct: 98 AMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157
Query: 429 IEFITATMHMNRVEREEHLYKAF 451
EF+ E L AF
Sbjct: 158 DEFLVTVNDFLFGLEETALANAF 180
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-08
Identities = 13/116 (11%), Positives = 34/116 (29%), Gaps = 12/116 (10%)
Query: 355 LKKVALKVI-----AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL-------PKL 402
+ +A+++ + +EE + + I+ EE
Sbjct: 36 YELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGE 95
Query: 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458
++ + + + D D +G + EF + ++ F D +
Sbjct: 96 EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNK 151
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 2e-20
Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 33/237 (13%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
R + R LG G FG Y HK K A K+ +K D+ E E IM
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMK 68
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
+L H +IV+L G E +IM+L GEL + K Q+ +
Sbjct: 69 NLD-HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S+ +HRD+ N L + +K DFGLS + + YY
Sbjct: 127 AYLESINCVHRDIAVRNILVA---SPECVKLGDFGLS---------RYIEDEDYYKASVT 174
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+PE + R + +D+W V ++ +LS G PF+ + + + +G
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 3e-20
Identities = 53/307 (17%), Positives = 101/307 (32%), Gaps = 68/307 (22%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRN 129
+GRG++G Y + + + A K S + ++ E I L H N
Sbjct: 17 LLELIGRGRYGAVYKGSLDE--RPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDN 68
Query: 130 IVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
I ++R + + L+M+ G L ++ ++ L + + Y
Sbjct: 69 IARFIVG-DERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLAY 126
Query: 184 CHSM---------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----- 229
H+ + HRDL N L D +DFGLS+ + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVK---NDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 230 ----LVGSAYYVAPEVLR--------RNYGAEADIWSAGVILYILLSGV----------- 266
VG+ Y+APEVL + + D+++ G+I + +
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243
Query: 267 --PPFWGETEQSIFDAILRGHIDFS------SDPWPNISSSAKDIVKKML---HADPKER 315
F E ++ + + W S + + + + + D + R
Sbjct: 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303
Query: 316 LSAAEVL 322
L+A
Sbjct: 304 LTAQXAE 310
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 35/250 (14%)
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDD 110
G + + LG G FG ++ + K K I R
Sbjct: 1 GAMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQS 58
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERA 169
+ V + + L H +IV L G S+ L+ G L D + +G +
Sbjct: 59 FQAVTDHMLAIGSLD-HAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQL 116
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
N Q+ ++Y G++HR+L N L S ++ DFG++
Sbjct: 117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVA---------DL 164
Query: 230 LVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ 275
L + A E + Y ++D+WS GV ++ L++ G P+ G
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
Query: 276 SIFDAILRGH 285
+ D + +G
Sbjct: 225 EVPDLLEKGE 234
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 3e-20
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 29/235 (12%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+LG G FGV A K + L + ++D REV MH
Sbjct: 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
L HRN++ L G + ++ +L G L DR+ +GH+ + Q+ +
Sbjct: 77 SLD-HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S +HRDL N L ++ +K DFGL D Y +
Sbjct: 135 GYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALPQND-------DHYVMQEHR 184
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283
APE L+ R + +D W GV L+ + + G P+ G I I +
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-20
Identities = 40/239 (16%), Positives = 74/239 (30%), Gaps = 29/239 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS----SRKLINRDDVEDVRREVQIM 121
IF LG+G F + ++ +R+ E +M
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
L+ H+++V G L+ + G L + K + + +Q+
Sbjct: 67 SKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA 125
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPL-----KATDFGLSVFFKPGDVFKDLVGSAY 235
+H+ ++H ++ +N L + K +D G+S ++
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---------ITVLPKDI 176
Query: 236 Y------VAPEVL--RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
V PE + +N D WS G L+ + S G P Q H
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 3e-20
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R +LG GQ+G Y K A K++ + +VE+ +E +M +
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK 274
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H N+V+L G +I + G L D R + S + Q+ + + Y
Sbjct: 275 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APE 240
+HR+L N L E+ +K DFGLS GD + G+ + + APE
Sbjct: 334 LEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 389
Query: 241 VLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
L + ++D+W+ GV+L+ + + G+ P+ G +++ + + + +
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR---MERPEGCPE 446
Query: 299 SAKDIVKKMLHADPKER 315
++++ +P +R
Sbjct: 447 KVYELMRACWQWNPSDR 463
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 3e-20
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYI 429
L F S+ G I +EL+ L + G + R ++ D D +GT+ +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477
EF +N + F FD D S + L+ + M
Sbjct: 63 EFKELWAVLN------GWRQHFISFDSDRSGTVDPQ---ELQKALTTM 101
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-14
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+ G ++ F S D+D SGT+ +EL+ L +G RL+ V + +G I + ++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA--KRYSTSGKITFDDY 128
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
I + + L +F D
Sbjct: 129 IACCVKLRA------LTDSFRRRDSAQQ 150
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 5e-20
Identities = 65/305 (21%), Positives = 112/305 (36%), Gaps = 48/305 (15%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R R LG G FG Y + + + Q A K++ ++ + D D E I
Sbjct: 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALI 127
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
+ H+NIV G ++++L AGG+L + + ++ ++ V
Sbjct: 128 ISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 181 V-------HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Y +HRD+ N L + K DFG++ +D+ +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRA 237
Query: 234 AYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
YY PE + ++ D WS GV+L+ + S G P+ ++ Q + +
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH-PWMRVDGDASD 335
+ G DP N I M P++R + A +L + D D +
Sbjct: 298 FVTSGGR---MDPPKNCPGPVYRI---MTQCWQHQPEDRPNFAIILERIEYCTQDPDVIN 351
Query: 336 KPLDI 340
L I
Sbjct: 352 TALPI 356
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 7e-20
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
R GR +G GQFG + ++ ++ A K+ + + E +E M
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMR 71
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
H +IV+L G + V +IM+LC GEL + K + Q+ T +
Sbjct: 72 QFD-HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S +HRD+ N L S + +K DFGLS + + S YY
Sbjct: 130 AYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLS---------RYMEDSTYYKASKG 177
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+W GV ++ +L GV PF G + I G
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 7e-20
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++ ++ +FK DT+ G I+ EL L LG+ ++ EV+++M D DG+G ID+
Sbjct: 2 ADD---MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDF 57
Query: 429 IEFITATMHMNRVEREEHLYKAF 451
EFI + + + K F
Sbjct: 58 NEFI--SFCNANPGLMKDVAKVF 78
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 37.2 bits (87), Expect = 9e-04
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
AL+ + ++E ++ M +DTD G I F E
Sbjct: 26 TDALRTLGSTSADE----VQRMMAEIDTDGDGFIDFNE 59
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 1e-19
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 333 ASDKPLDIAVLTRMKQFRAMNKLKKVA-LKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391
A D + + +A ++ +K++FK++D D SG I
Sbjct: 3 AKDLLKADDIKKALDAVKAEGSFNHKKFFALVGLKAMSAN--DVKKVFKAIDADASGFIE 60
Query: 392 FEELK---AGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
EELK G L+++E + ++AAD DG+G I EF T
Sbjct: 61 EEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFET 105
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-15
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L ++++ ++A V G+ ++ +F A + + + + + K F+ D D S
Sbjct: 6 LLKADDIKKALDA--VKAEGSFNHKKFF-ALVGLKAMSAND-VKKVFKAIDADAS 56
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 1e-19
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNG 424
+++++ KE F+ D G I + + + LG + +EV +++ D +
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 425 TIDYIEFI---TATMHMNRVEREEHLYKAFEYFDKDNS 459
+D+ F+ A E + F FDK+ +
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGN 101
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 6e-15
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ E+ E F+ D + +G + EL+ L LG +++E EV ++ D NG I+
Sbjct: 85 TYEDY---LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCIN 140
Query: 428 YIEFITATMHM 438
Y F+ + +
Sbjct: 141 YEAFLKHILSV 151
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTD--NSGTITFEE---LKAGLPKLGTRLSESEV 411
++ + +N + E + ++ + +D S + FE + + K + + +
Sbjct: 33 GDVMRALGQNPTNAE---VLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 89
Query: 412 RQLMEAADVDGNGTIDYIEF 431
+ D +GNG + E
Sbjct: 90 LEGFRVFDKEGNGKVMGAEL 109
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-19
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 40/238 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R +ELG GQFGV L K + A K I ++ +E Q M L+
Sbjct: 7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKE----GSMSEDEFFQEAQTMMKLS 61
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----AANLCRQMVTV 180
H +V+ G + + ++ + + G L + + + G E + ++C M
Sbjct: 62 -HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA-- 118
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ S +HRDL N L D +K +DFG++ + ++ Y
Sbjct: 119 --FLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMT---------RYVLDDQYVSSVG 164
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APEV Y +++D+W+ G++++ + S G P+ T + + +GH
Sbjct: 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-19
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 30/232 (12%)
Query: 70 IFGRELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+ +ELG G FG K + A K + + + +++ E +M L +
Sbjct: 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-N 77
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
IV + G E S L+M++ G L + H ++ L Q+ + Y
Sbjct: 78 PYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---------- 237
+HRDL N L K +DFGLS + + YY
Sbjct: 137 NFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADE--------NYYKAQTHGKWPVK 185
Query: 238 --APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + + +++D+WS GV+++ S G P+ G + + +G
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 4e-19
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ F +E+G GQFG+ +L + K + A K+I ED E ++M L+
Sbjct: 7 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS 61
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL---CRQMVTVVH 182
H +V+L G ++ + L+ + G L D + + AA L C + +
Sbjct: 62 -HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMA 118
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV----- 237
Y V+HRDL N L E+ +K +DFG++ + ++ Y
Sbjct: 119 YLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMT---------RFVLDDQYTSSTGTK 166
Query: 238 ------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+PEV Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 5e-19
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 28/230 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHH 123
+ +G+G+FG L ++ K A K I ++D + E +M
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI-------KNDATAQAFLAEASVMTQ 70
Query: 124 LTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTV 180
L H N+V+L G E++ + ++ + A G L D R + +
Sbjct: 71 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +HRDL N L S ED+ K +DFGL+ + V
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT-----KEASSTQDTGKLPVKWT 181
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE LR + + ++D+WS G++L+ + S G P+ + + + +G+
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 231
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 6e-19
Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 51/261 (19%)
Query: 61 PMEDVRNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
P + R+LG G FG Y +T +Q A KS+ + + + D+++
Sbjct: 15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKK 72
Query: 117 EVQIMHHLTGHRNIVELKGA--YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANL 173
E++I+ +L H NIV+ KG + + + LIM+ G L + + K + +
Sbjct: 73 EIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VG 232
Q+ + Y S +HRDL N L + +K DFGL+ K +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLT---------KAIETD 179
Query: 233 SAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS--------------- 264
YY APE L + +D+WS GV L+ LL+
Sbjct: 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 239
Query: 265 GVPPFWGETEQSIFDAILRGH 285
P T + + + G
Sbjct: 240 IGPTHGQMTVTRLVNTLKEGK 260
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 6e-19
Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 47/244 (19%)
Query: 59 GKPMED-VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
GK ++D N ++ G+++G G FG+ YL + ++ A + + + + E
Sbjct: 28 GKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVK----VEYQENGPLFSE 83
Query: 118 VQIMHHLTGHRNIVELKGAY-------------------EDRHSVNLIMDLCAGGELFDR 158
++ + I + + ++M+ G +L
Sbjct: 84 LKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRF-MVMERL-GIDLQKI 141
Query: 159 IIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
G + + L +M+ V+ Y H +H D+K N L D + D+GLS
Sbjct: 142 SGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ-VYLADYGLS 200
Query: 219 VFFKPG--------DVFKDLVGSAYYVA------PEVLRRNYGAEADIWSAG-VILYILL 263
+ P + K G+ + + + RR +D+ G +L L
Sbjct: 201 YRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRR-----SDVEILGYCMLRWLC 255
Query: 264 SGVP 267
+P
Sbjct: 256 GKLP 259
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 6e-19
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 32/234 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
F +ELG GQFGV + A K I ++ E ++M +L+
Sbjct: 23 PKDLTFLKELGTGQFGVVKYGKWRGQY-DVAIKMIKE----GSMSEDEFIEEAKVMMNLS 77
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYC 184
H +V+L G + + +I + A G L + + + + + +C+ + + Y
Sbjct: 78 -HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------- 237
S +HRDL N L + + +K +DFGLS + ++ Y
Sbjct: 137 ESKQFLHRDLAARNCLVN---DQGVVKVSDFGLS---------RYVLDDEYTSSVGSKFP 184
Query: 238 ----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
PEVL + +++DIW+ GV+++ + S G P+ T + I +G
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 7e-19
Identities = 56/288 (19%), Positives = 110/288 (38%), Gaps = 47/288 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R RELG+G FG+ Y V + + + A K++ + + + + E +
Sbjct: 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASV 81
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
M ++V L G +IM+L G+L + + + +
Sbjct: 82 MKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 181 VHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ + +HRDL N + + ED +K DFG++ +D+
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT---------RDI 188
Query: 231 VGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
+ YY +PE L+ + +D+WS GV+L+ I P+ G + +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ ++ G + D N ++++ +PK R S E+++
Sbjct: 249 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 8e-19
Identities = 59/243 (24%), Positives = 89/243 (36%), Gaps = 38/243 (15%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ +LG+G FG Y +T A K + + D D +RE+QI+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQIL 78
Query: 122 HHLTGHRNIVELKG--AYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMV 178
L IV+ +G R S+ L+M+ G L D + + Q+
Sbjct: 79 KAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV 237
+ Y S +HRDL N L ++ +K DFGL+ K L + YYV
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLA---------KLLPLDKDYYV 185
Query: 238 ------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283
APE L + ++D+WS GV+LY L + E R
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER 245
Query: 284 GHI 286
Sbjct: 246 DVP 248
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-18
Identities = 62/298 (20%), Positives = 100/298 (33%), Gaps = 60/298 (20%)
Query: 25 PGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGV-- 82
HH + + ++ P + F ++LG+G FG
Sbjct: 6 HHHHHDYDIPTTENLYFQGAMGSAFEDR-------DPTQFEERHLKFLQQLGKGNFGSVE 58
Query: 83 --TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA--YE 138
Y +T + A K + + + + D RE++I+ L H NIV+ KG
Sbjct: 59 MCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 114
Query: 139 DRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE 197
R ++ LIM+ G L D + K Q+ + Y + +HRDL
Sbjct: 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATR 174
Query: 198 NFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV------------APEVLR- 243
N L ++ +K DFGL+ K L YY APE L
Sbjct: 175 NILVE---NENRVKIGDFGLT---------KVLPQDKEYYKVKEPGESPIFWYAPESLTE 222
Query: 244 RNYGAEADIWSAGVILYILLS----------------GVPPFWGETEQSIFDAILRGH 285
+ +D+WS GV+LY L + G + + +
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 280
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 1e-18
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 36/234 (15%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHH 123
+ +G+G+FG L ++ K A K I ++D + E +M
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI-------KNDATAQAFLAEASVMTQ 242
Query: 124 LTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTV 180
L H N+V+L G E++ + ++ + A G L D R + +
Sbjct: 243 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +HRDL N L S ED+ K +DFGL+ K+ +
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---------KEASSTQDTGKLP 349
Query: 238 ----APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE LR + ++D+WS G++L+ + S G P+ + + + +G+
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 403
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 1e-18
Identities = 57/257 (22%), Positives = 92/257 (35%), Gaps = 53/257 (20%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
F ++LG+G FG Y +T + A K + + + + D RE++I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEIL 65
Query: 122 HHLTGHRNIVELKGA--YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMV 178
L H NIV+ KG R ++ LIM+ G L D + K Q+
Sbjct: 66 KSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV 237
+ Y + +HRDL N L ++ +K DFGL+ K L ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLT---------KVLPQDKEFFK 172
Query: 238 ------------APEVLR-RNYGAEADIWSAGVILYILLS----------------GVPP 268
APE L + +D+WS GV+LY L + G
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 269 FWGETEQSIFDAILRGH 285
+ + +
Sbjct: 233 QGQMIVFHLIELLKNNG 249
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 2e-18
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNG 424
S+ KE F D IT ++ LG + +E+ +++ +
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 425 TIDYIEFI---TATMHMNRVEREEHLYKAFEYFDKDNS 459
I + EF+ A + E + FDK+ +
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGN 99
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 4e-15
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ E+ + E + D + +GT+ EL+ L LG +++E EV +LM+ + D NG I+
Sbjct: 83 TFEDFV---EGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCIN 138
Query: 428 YIEFITATMHM 438
Y F+ M +
Sbjct: 139 YEAFVKHIMSV 149
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
F +GRG FG Y L+ + K A KS+ ++ + +V E IM
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMK 81
Query: 123 HLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ H N++ L G S +++ G+L + I + + + Q+
Sbjct: 82 DFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y S +HRDL N + E +K DFGL+ +D+ YY
Sbjct: 141 MKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLA---------RDMYDKEYYSVHN 188
Query: 238 -----------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
A E L+ + + ++D+WS GV+L+ L++ G PP+ I +L+G
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
Query: 285 H 285
Sbjct: 249 R 249
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 2e-18
Identities = 74/292 (25%), Positives = 113/292 (38%), Gaps = 36/292 (12%)
Query: 15 HSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR----NTYI 70
D G+ P +I P PRP TS S + + N I
Sbjct: 280 PQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLI 339
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
ELG G FG ++ K+Q A K + ++ + D E++ RE QIMH L +
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD-NP 396
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSM 187
IV L G + ++ L+M++ GG L ++ + A L Q+ + Y
Sbjct: 397 YIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---------- 237
+HR+L N L K +DFGLS D +YY
Sbjct: 456 NFVHRNLAARNVLLV---NRHYAKISDFGLSKALGADD--------SYYTARSAGKWPLK 504
Query: 238 --APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS GV ++ LS G P+ + I +G
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 2e-18
Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 25/123 (20%)
Query: 362 VIAENLSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLGT---------------R 405
+ A LS+ + + +F + D ++ G I +++ + + K+
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKA--------FEYFDK 456
+ L + AD + + + E++ + VE+ E L + F+ D
Sbjct: 61 TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120
Query: 457 DNS 459
Sbjct: 121 SGD 123
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 3e-13
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 3/87 (3%)
Query: 348 QFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS 407
++ M + V E+L E + MF DT I E G +
Sbjct: 85 EWLKMWA-ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IP 141
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITA 434
+S+ + G + F
Sbjct: 142 KSDCDAAFDTLSDGGKTMVTREIFARL 168
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-18
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++ ++ KE F+ +D D G I+ +++A LG +E E+ ++ + G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPI 106
Query: 427 DYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDN 458
++ F+T + + E+ + AF FD+ +
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGD 139
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 1e-15
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
IA E+ I F D + G E LK L G + S+ EV Q + A +DG
Sbjct: 119 IAGTDEEDVI---VNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDG 174
Query: 423 NGTIDYIEFITATMHMNRVEREE 445
NG ID +F + + +EE
Sbjct: 175 NGLIDIKKFAQ---ILTKGAKEE 194
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
LK+ L E S++E+ + D +G I ++
Sbjct: 147 LKRS-LTTWGEKFSQDEV---DQALSEAPIDGNGLIDIKKF 183
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 4e-18
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 367 LSEEEIMGLKEMFKSMD--TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LS++EI LK++F+ D G + +L LG +V + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGG-THKMGEK 61
Query: 425 TIDYIEFITATMHMNRVER--EEHLYKAFEYFDKDNS 459
++ + EF+ A + E+ +AF+ FD++
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQ 98
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 2e-15
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
+ E + + M E FK+ D + G I+ EL+ L LG RLS+ +V ++++ D+
Sbjct: 75 LMDCEQGTFADYM---EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDL 131
Query: 421 --DGNGTIDYIEFI 432
D G + Y +F+
Sbjct: 132 QEDLEGNVKYEDFV 145
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 77.5 bits (192), Expect = 4e-18
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ + L+ F++ D D G IT +EL+ + LG L + E+ ++ ADVD +G ++
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 428 YIEFIT 433
Y EF
Sbjct: 61 YEEFAR 66
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
+ A+ + + L +EE L M + D D G + +EE
Sbjct: 29 RRAMAGLGQPLPQEE---LDAMIREADVDQDGRVNYEE 63
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 5e-18
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 34/235 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R T LG GQFG ++ + + A KS+ + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYYNGH-TKVAVKSLKQ----GSMSPDAFLAEANLMKQLQ 66
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H+ +V L + + +I + G L D + + + ++ Q+ + +
Sbjct: 67 -HQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------ 237
+HRDL+ N L S + K DFGL+ + + + Y
Sbjct: 125 IEERNYIHRDLRAANILVS---DTLSCKIADFGLA---------RLIEDNEYTAREGAKF 172
Query: 238 -----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + + ++D+WS G++L +++ G P+ G T + + RG+
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 5e-18
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L +++V + A + + EF + + + + KAF D+D S
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKS 55
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 9e-16
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEA 417
KV + S ++ +K+ F +D D SG I +ELK L L+++E + +
Sbjct: 32 KVGLASKSLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLAD 88
Query: 418 ADVDGNGTIDYIEFIT 433
D DG+G I EF
Sbjct: 89 GDKDGDGMIGVDEFAA 104
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 82.0 bits (202), Expect = 5e-18
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 3/127 (2%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+P + ++ ++ + + N ++ E+ L FK+ SG + E
Sbjct: 15 QRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEE 72
Query: 394 ELKAGLPKLGTRLSESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452
K + S L A D G++ + +F+TA + R E L F
Sbjct: 73 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 132
Query: 453 YFDKDNS 459
+D +
Sbjct: 133 LYDINKD 139
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 1e-06
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 21/111 (18%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL----KAGLPKLGT----RLSES 409
AL ++ E+ L+ F D + G I EE+ KA +G L E
Sbjct: 113 TALSILLRGTVHEK---LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 169
Query: 410 EVRQL----MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
RQ + D + +G + EF+ + + ++++ ++ + F
Sbjct: 170 TPRQHVDVFFQKMDKNKDGIVTLDEFLES------CQEDDNIMRSLQLFQN 214
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 9e-18
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ +E+ + F+++D + +GTI EL+ L LG L+ SEV +LM+
Sbjct: 64 YRKPIKTPTEQSKEM---LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKE 120
Query: 418 ADVDGNGTIDYIEFITATMH 437
V G+G I+Y F+ +
Sbjct: 121 VSVSGDGAINYESFVDMLVT 140
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 5e-17
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
++E F+ D DN G ++ EEL + L LG + +E+ + + D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLA 58
Query: 430 EFIT--ATMHMNRVEREEHLYKAFEYFDKDNS 459
F T E+ + + AF DK+ +
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGN 90
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 9e-18
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 32/230 (13%)
Query: 73 RELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
ELG G FG + + + A K + ++ + D E++ RE QIMH L + I
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD-NPYI 72
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
V L G + ++ L+M++ GG L ++ + A L Q+ + Y
Sbjct: 73 VRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------------ 237
+HRDL N L K +DFGLS D +YY
Sbjct: 132 VHRDLAARNVLLV---NRHYAKISDFGLSKALGADD--------SYYTARSAGKWPLKWY 180
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS GV ++ LS G P+ + I +G
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 230
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 9e-18
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGT 425
+ +++ + FK D + G I F+E K + K+G L+++EV + M+ AD DGNG
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 426 IDYIEFITATMHMNRVERE 444
ID EF+ +E
Sbjct: 62 IDIPEFMDLIKKSKNALKE 80
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-17
Identities = 53/249 (21%), Positives = 93/249 (37%), Gaps = 43/249 (17%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ GR LG+G+FG L + + A K + + +I D+E+ RE M
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA-DIIASSDIEEFLREAACMK 80
Query: 123 HLTGHRNIVELKGA------YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL--- 173
H ++ +L G +I+ G+L ++A L
Sbjct: 81 EFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 174 ---CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ + Y S +HRDL N + + ED + DFGLS + +
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLS---------RKI 187
Query: 231 VGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276
YY A E L Y +D+W+ GV ++ +++ G P+ G
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 277 IFDAILRGH 285
I++ ++ G+
Sbjct: 248 IYNYLIGGN 256
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 45/269 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + +LG+G FG ++ T T + A K++ E +E Q+M L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP----GTMSPEAFLQEAQVMKKLR 237
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERA-----AANLCRQMVT 179
H +V+L + + ++ + + G L D + G Y AA + M
Sbjct: 238 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA- 294
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-- 237
Y M +HRDL+ N L E+ K DFGL+ + + + Y
Sbjct: 295 ---YVERMNYVHRDLRAANILVG---ENLVCKVADFGLA---------RLIEDNEYTARQ 339
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286
APE + ++D+WS G++L L + G P+ G + + D + RG+
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKER 315
P S D++ + +P+ER
Sbjct: 400 ---MPCPPECPESLHDLMCQCWRKEPEER 425
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 34/235 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + ++LG GQFG ++ T+ + A K++ VE E +M L
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATYNKHT-KVAVKTMKP----GSMSVEAFLAEANVMKTLQ 241
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H +V+L + + +I + A G L D + + Q+ + +
Sbjct: 242 -HDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------ 237
+HRDL+ N L S K DFGL+ + + + Y
Sbjct: 300 IEQRNYIHRDLRAANILVS---ASLVCKIADFGLA---------RVIEDNEYTAREGAKF 347
Query: 238 -----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + ++ ++D+WS G++L +++ G P+ G + + A+ RG+
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
RN I G+ LG G+FG L T + A K++ ++ ++E+ E M
Sbjct: 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMK 91
Query: 123 HLTGHRNIVELKGAYEDRHSVN-----LIMDLCAGGELFDRIIAKGHYSERAAANL---- 173
+ H N++ L G + S +I+ G+L ++ + L
Sbjct: 92 DFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 174 --CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
+ + Y + +HRDL N + +D + DFGLS K +
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTVCVADFGLS---------KKIY 198
Query: 232 GSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSI 277
YY A E L R Y +++D+W+ GV ++ + + G+ P+ G +
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258
Query: 278 FDAILRGH 285
+D +L GH
Sbjct: 259 YDYLLHGH 266
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 2e-17
Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 36/299 (12%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRN 67
S + + T + G ++ V V +
Sbjct: 30 GSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSL 89
Query: 68 TYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
F +GRG FG Y L+ + K A KS+ ++ + +V E IM
Sbjct: 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDF 147
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVH 182
+ H N++ L G S +++ G+L + I + + + Q+ +
Sbjct: 148 S-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 206
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV----- 237
+ S +HRDL N + E +K DFGL+ +D+ +
Sbjct: 207 FLASKKFVHRDLAARNCMLD---EKFTVKVADFGLA---------RDMYDKEFDSVHNKT 254
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
A E L+ + + ++D+WS GV+L+ L++ G PP+ I +L+G
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 3e-17
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + SEEE ++E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG
Sbjct: 22 MKDTDSEEE---IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 78
Query: 423 NGTIDYIEFIT 433
+G ++Y EF+
Sbjct: 79 DGQVNYEEFVQ 89
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 4e-04
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ E + M + EE + +AF DKD +
Sbjct: 7 HHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGN 43
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 38.0 bits (89), Expect = 7e-04
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L+ V + + E L++EE + EM + D D G + +EE
Sbjct: 51 LRHV-MTNLGEKLTDEE---VDEMIREADIDGDGQVNYEE 86
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-17
Identities = 51/238 (21%), Positives = 92/238 (38%), Gaps = 31/238 (13%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + +G G+FG + + A K++ + D E IM
Sbjct: 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIM 100
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ H NI+ L+G + +I + G L + G +S + R +
Sbjct: 101 GQFS-HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +M +HRDL N L + + K +DFGLS + A Y
Sbjct: 160 MKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLEDDP-------EATYTTSG 209
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS G++++ +++ G P+W + + AI G
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF 267
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-17
Identities = 59/255 (23%), Positives = 94/255 (36%), Gaps = 51/255 (20%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ R+LG G FG Y T+ T + A K++ + ++E+ I+
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDIL 87
Query: 122 HHLTGHRNIVELKGA--YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
L H +I++ KG S+ L+M+ G L D + + +Q+
Sbjct: 88 RTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICE 145
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV- 237
+ Y H+ +HRDL N L D +K DFGL+ K + G YY
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLA---------KAVPEGHEYYRV 193
Query: 238 -----------APEVLR-RNYGAEADIWSAGVILYILLS---------------GVPPFW 270
APE L+ + +D+WS GV LY LL+
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 253
Query: 271 GETEQSIFDAILRGH 285
T + + + RG
Sbjct: 254 QMTVLRLTELLERGE 268
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-17
Identities = 49/239 (20%), Positives = 87/239 (36%), Gaps = 34/239 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ + +G G G L A K++ + D E IM
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMG 105
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
H NI+ L+G ++ + G L + G ++ + R + +
Sbjct: 106 QFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y +G +HRDL N L + K +DFGLS + L
Sbjct: 165 RYLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLS---------RVLEDDPDAAYTTT 212
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS GV+++ +L+ G P+W T + + ++ G+
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 4e-17
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
R R +G+G FGV Y + + Q A KS+ ++ VE RE +M
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMR 77
Query: 123 HLTGHRNIVELKGAYEDRHSVNL-IMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTV 180
L H N++ L G + ++ G+L I + + + + Q+
Sbjct: 78 GLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG 136
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +HRDL N + E +K DFGL+ +D++ YY
Sbjct: 137 MEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLA---------RDILDREYYSVQQ 184
Query: 238 -----------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
A E L+ + ++D+WS GV+L+ LL+ G PP+ + + +G
Sbjct: 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244
Query: 285 H 285
Sbjct: 245 R 245
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 5e-17
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 42/239 (17%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + +LG+G FG ++ T T + A K++ E +E Q+M L
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP----GTMSPEAFLQEAQVMKKLR 320
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERA-----AANLCRQMVT 179
H +V+L + + ++ + + G L D + G Y AA + M
Sbjct: 321 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA- 377
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-- 237
Y M +HRDL+ N L E+ K DFGL+ + + + Y
Sbjct: 378 ---YVERMNYVHRDLRAANILVG---ENLVCKVADFGLA---------RLIEDNEYTARQ 422
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + ++D+WS G++L L + G P+ G + + D + RG+
Sbjct: 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 481
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 6e-17
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 48/254 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + +D + A K + + + D+ E + E++I
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEALMSELKI 102
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANL- 173
M HL H NIV L GA V +I + C G+L + R++ A +
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 174 -------CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
Q+ + + S +HRD+ N L + K DFGL+
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIGDFGLA-------- 211
Query: 227 FKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWG- 271
+D++ + Y+ APE + Y ++D+WS G++L+ I G+ P+ G
Sbjct: 212 -RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
Query: 272 ETEQSIFDAILRGH 285
+ + G+
Sbjct: 271 LVNSKFYKLVKDGY 284
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 7e-17
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 31/243 (12%)
Query: 66 RNTYIFGRELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
N F +G G FG + + A K + ++ ++DD D E++++
Sbjct: 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 81
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---RIIAKGHYSERAAANLCRQMVTV 180
L H NI+ L GA E R + L ++ G L D + A AN ++
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 181 ---VHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
+H+ +HRDL N L E+ K DFGLS + +V+
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLS---RGQEVY 195
Query: 228 KDLVGSAYYV---APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAIL 282
V A E L Y +D+WS GV+L+ I+ G P+ G T +++ +
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 283 RGH 285
+G+
Sbjct: 256 QGY 258
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 7e-17
Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 12/90 (13%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYI 429
+ F ++ G + EEL+ L + G + S R ++ D D G + +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNS 459
F + + F D+D S
Sbjct: 61 AFKELWAAL------NAWKENFMTVDQDGS 84
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 9e-16
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+ KE F ++D D SGT+ EL+ + +G RLS + +++ NG I + ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDY 126
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + + L F D
Sbjct: 127 VACCVKL------RALTDFFRKRDHLQQ 148
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 9e-17
Identities = 63/333 (18%), Positives = 118/333 (35%), Gaps = 54/333 (16%)
Query: 26 GHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYL 85
G +G + P + S + R + ELG G FG +L
Sbjct: 1 GAMGSGSSLSPT-EGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFL 59
Query: 86 -----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140
+ + K A K++ K + +D +RE +++ L H++IV G +
Sbjct: 60 AECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEG 115
Query: 141 HSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVH-------------YCH 185
+ ++ + G+L F R ++ + + Y
Sbjct: 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA 175
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-------- 237
+ +HRDL N L + +K DFG+S +D+ + YY
Sbjct: 176 GLHFVHRDLATRNCLVG---QGLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLP 223
Query: 238 ----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
PE + R + E+D+WS GV+L+ + + G P++ + D I +G +
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE---LE 280
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
I++ +P++R S +V
Sbjct: 281 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 1e-16
Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 15/114 (13%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGN 423
+ L F + G I +EL+ L + G + R ++ D D +
Sbjct: 29 GQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMS 87
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477
GT+ + EF +N + F FD D S + L+ + M
Sbjct: 88 GTMGFNEFKELWAVLN------GWRQHFISFDTDRSGTVDPQ---ELQKALTTM 132
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 6e-15
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+ G ++ F S DTD SGT+ +EL+ L +G RLS V + + NG I + ++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDY 159
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
I + + L +F D
Sbjct: 160 IACCVKL------RALTDSFRRRDTAQQ 181
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 59/258 (22%), Positives = 95/258 (36%), Gaps = 52/258 (20%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + D A K + + + + E + E+++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL-----------FDRIIAKGHYSERA 169
+ +L H NIV L GA +I + C G+L + +
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 170 AANLCRQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
A +++ + + S +HRDL N L + K DFGL+
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA---- 192
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPP 268
+D+ + YV APE + Y E+D+WS G+ L+ L S G P
Sbjct: 193 -----RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
Query: 269 FWG-ETEQSIFDAILRGH 285
+ G + + I G
Sbjct: 248 YPGMPVDSKFYKMIKEGF 265
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-16
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
E+ + F+ D +++G ++ +L+ L LG +L+++EV +L++ +VD N
Sbjct: 77 TTKAKTED---FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSN 133
Query: 424 GTIDYIEFI 432
G IDY +FI
Sbjct: 134 GEIDYKKFI 142
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 4e-16
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Query: 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA-ADVDGNGTIDYI 429
K++F D G I + L L +G + V+ ++ A + + ++
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 430 EFITATMHMNRVER-------EEHLYKAFEYFDKDNS 459
+ + +N E E KAF+ FDK+++
Sbjct: 62 QITGL-IEVNEKELDATTKAKTEDFVKAFQVFDKEST 97
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 7e-04
Identities = 10/40 (25%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L+ + L + E L++ E+ E+ K ++ D++G I +++
Sbjct: 105 LRYM-LTGLGEKLTDAEV---DELLKGVEVDSNGEIDYKK 140
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTY-------LVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
R+ G+ LG G FG A K + + D+ D+ E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEM 91
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 179 TVVH----------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Y S +HRDL N L + E++ +K DFGL+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA---- 204
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPP 268
+D+ YY APE L R Y ++D+WS GV+++ I G P
Sbjct: 205 -----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 269 FWGETEQSIFDAILRGH 285
+ G + +F + GH
Sbjct: 260 YPGIPVEELFKLLKEGH 276
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 2e-16
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L ++ + + GT DY F + + + + FE DKD S
Sbjct: 6 LKADDINKAIS--AFKDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQS 55
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 6e-15
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELK---AGLPKLGTRLSESEVRQLMEAADVDGNG 424
++ + +KE+F+ +D D SG I EELK G G L+++E + L+ A D D +G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 425 TIDYIEFIT 433
I EF
Sbjct: 96 KIGADEFAK 104
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 3e-16
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 50/255 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
+ F ELG +FG Y + Q A K++ + E+ R E +
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAML 65
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----- 175
L H N+V L G +++I C+ G+L + ++ + +S+ + + R
Sbjct: 66 RARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 176 -QMVTVVHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
+ VH S V+H+DL N L + +K +D GL
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY---DKLNVKISDLGLF------ 175
Query: 225 DVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFW 270
+++ + YY APE + + ++DIWS GV+L+ + S G+ P+
Sbjct: 176 ---REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
Query: 271 GETEQSIFDAILRGH 285
G + Q + + I
Sbjct: 233 GYSNQDVVEMIRNRQ 247
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 3e-16
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTY-------LVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
R+ G+ LG G FG A K + + D+ D+ E+
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEM 137
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 179 TVVH----------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Y S +HRDL N L + E++ +K DFGL+
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA---- 250
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPP 268
+D+ YY APE L R Y ++D+WS GV+++ I G P
Sbjct: 251 -----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 269 FWGETEQSIFDAILRGH 285
+ G + +F + GH
Sbjct: 306 YPGIPVEELFKLLKEGH 322
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 4e-16
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++EE+ F+S+ D S I+ K K ++LS E+ + E +D D +G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 427 DYIEFITATMHM 438
EF A H+
Sbjct: 74 TLPEFCAA-FHL 84
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 5e-16
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 30/237 (12%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ +G G+FG L + A K++ + D E IM
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMG 101
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
H NI+ L+G V ++ + G L + ++ + R + + +
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y MG +HRDL N L + + K +DFGL + A Y
Sbjct: 161 KYLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLGRVLEDDP-------EAAYTTRGG 210
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+PE + R + + +D+WS G++L+ ++S G P+W + Q + A+ G+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 6e-16
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF-------ACKSISSRKLINRDDVEDVRREV 118
R+ + G+ LG G FG L + A K + + D+ D+ E+
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEM 125
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
++M + H+NI+ L GA + +I++ + G L + + A+ + N
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 179 TVVH----------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLA---- 238
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPP 268
+D+ YY APE L R Y ++D+WS GV+L+ I G P
Sbjct: 239 -----RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
Query: 269 FWGETEQSIFDAILRGH 285
+ G + +F + GH
Sbjct: 294 YPGVPVEELFKLLKEGH 310
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 7e-16
Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 44/274 (16%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLV 86
HH + S TS + G VL + R G+ Y
Sbjct: 5 HHHSSGVDLGTENLYFQSMTTSLEALPTGTVLTDK---SGRQWKLKSFQTRDNQGILYEA 61
Query: 87 THKDT--------KQQFACK--SISSRKLINRDDVEDVRREVQI----MHHLTGHRNIVE 132
T KQ+F+ K + R ++ + + +Q+ + T I
Sbjct: 62 APTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121
Query: 133 LK--GAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
G ++D++ L++ G L + K SER+ + +++ + + H
Sbjct: 122 CMGFGVHQDKYRF-LVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE 179
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--------DVFKDLVGSAYYVA-- 238
+H ++ EN + + +G + + P G +++
Sbjct: 180 YVHGNVTAENIFVDPEDQSQ-VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD 238
Query: 239 ----PEVLRRNYGAEADIWSAG-VILYILLSGVP 267
RR +D+ S G +L L +P
Sbjct: 239 LHKGCGPSRR-----SDLQSLGYCMLKWLYGFLP 267
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 8e-16
Identities = 59/257 (22%), Positives = 100/257 (38%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ G+ LGRG FG + T + A K + ++ + + E++I
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKI 83
Query: 121 MHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD--------RIIAKGHYSERAAA 171
+ H+ H N+V L GA + + +I++ C G L + K +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 172 NLC-RQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
L ++ + S +HRDL N L S E + +K DFGL+
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----- 195
Query: 224 GDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPF 269
+D+ YV APE + R Y ++D+WS GV+L+ I G P+
Sbjct: 196 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 270 WG-ETEQSIFDAILRGH 285
G + ++ + G
Sbjct: 252 PGVKIDEEFCRRLKEGT 268
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 9e-16
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 360 LKVIAENLSEEEIMG-LKEMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEA 417
L V+AE + EE + L + F + IT E L+ LG +S+ + + ++
Sbjct: 26 LPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVRE 85
Query: 418 ADVDGNGTIDYIEFITATMHMNR---VEREEHLYKAFEYFDKDNSTS 461
D+DG+G ++ EF + ++ + E L KA +++ S
Sbjct: 86 GDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCNHNLS 132
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 3e-12
Identities = 7/53 (13%), Positives = 13/53 (24%), Gaps = 1/53 (1%)
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
E + ++ Y + + M+ E L K F
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPER 54
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-05
Identities = 8/58 (13%), Positives = 14/58 (24%), Gaps = 1/58 (1%)
Query: 375 LKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
K M + +E+ L K+ SE+ + I
Sbjct: 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESL 62
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-05
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
L++ + + E +S+E+ + M + D D G + E + +L + E L
Sbjct: 62 LRRNSGILGIEGMSKED---AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWL 118
Query: 415 MEAADVD 421
+A +
Sbjct: 119 EKALTQE 125
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 51/256 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + RELG G FG +L ++ K A K++ K +D +RE ++
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAEL 70
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---------RIIAKGHYSERAAA 171
+ +L H +IV+ G D + ++ + G+L I+ G +
Sbjct: 71 LTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 172 NLCRQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
QM+ + Y S +HRDL N L + +K DFG+S
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMS------ 180
Query: 225 DVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFW 270
+D+ + YY PE + R + E+D+WS GVIL+ + + G P++
Sbjct: 181 ---RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
Query: 271 GETEQSIFDAILRGHI 286
+ + + I +G +
Sbjct: 238 QLSNTEVIECITQGRV 253
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-15
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L++++V ++A + + +Y F + + + KAF D+D S
Sbjct: 3 FSGILADADVAAALKA--CEAADSFNYKAFFAKVGLTA--KSADDIKKAFFVIDQDKS 56
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-15
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELK---AGLPKLGTRLSESEVRQLMEAADVDGNG 424
S ++ +K+ F +D D SG I +ELK L+++E + ++A D DG+G
Sbjct: 40 SADD---IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDG 96
Query: 425 TIDYIEFIT 433
I E+
Sbjct: 97 AIGVDEWAA 105
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 2e-15
Identities = 62/309 (20%), Positives = 118/309 (38%), Gaps = 75/309 (24%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + G+ LG G+FG + + A K + ++ + ++ D+ E +
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL-----------FDRIIAKGHYSERA 169
+ + H ++++L GA + LI++ G L + + G + +
Sbjct: 80 LKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 170 AANLCRQMVTV---VHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
+ + +T+ + + M ++HRDL N L + E +K +DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA---EGRKMKISDFG 195
Query: 217 LSVFFKPGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-IL 262
LS +D+ YV A E L Y ++D+WS GV+L+ I+
Sbjct: 196 LS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 263 LSGVPPFWGETEQSIFDAILRGHI----DFSSDPWPNISSSAKDIVKKML---HADPKER 315
G P+ G + +F+ + GH D S+ + ML +P +R
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRL----------MLQCWKQEPDKR 296
Query: 316 LSAAEVLNH 324
A++
Sbjct: 297 PVFADISKD 305
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-15
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT---RLSESEVRQLMEAADVDGNG 424
+ ++ +K++F +D D SG I EEL+ L + L+ +E + + A D DG+G
Sbjct: 40 TPDQ---IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 96
Query: 425 TIDYIEFIT 433
I EF +
Sbjct: 97 KIGVEEFQS 105
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 5e-14
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ LS ++ + + + +Y F + + + + + K F D+D S
Sbjct: 3 ITDILSAKDIESALSS--CQAADSFNYKSFFSTVGLSS--KTPDQIKKVFGILDQDKS 56
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 2e-15
Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 50/271 (18%)
Query: 35 DPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQ 94
+ S+ A +VG ++ + G +G+G FG YL ++ +
Sbjct: 6 AAQAGRQSSAKRHLAEQFAVGEIITD---MAAAAWKVGLPIGQGGFGCIYLA-DMNSSES 61
Query: 95 FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK-------------------G 135
+ K + D + E++ I +
Sbjct: 62 VGSDAPCVVK-VEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120
Query: 136 AYEDRHSVNLIMDLCAGG----ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ +IMD G ++++ +S + L +++ ++ Y H +H
Sbjct: 121 KNGKSYRF-MIMDRF--GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEHEYVH 175
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--------KDLVGSAYYVAPEVLR 243
D+K N L + D + D+GL+ + P V + G+ + + +
Sbjct: 176 GDIKASNLLLNYKNPDQ-VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTS---ID 231
Query: 244 RNYGAEA----DIWSAGVILYILLSGVPPFW 270
+ G D+ G + L+G P W
Sbjct: 232 AHNGVAPSRRGDLEILGYCMIQWLTGHLP-W 261
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 3e-15
Identities = 61/263 (23%), Positives = 100/263 (38%), Gaps = 57/263 (21%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R FG+ LG G FG ++ Q A K + ++ + + E + E+++
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMSELKM 101
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL---------------FDRIIAKGHY 165
M L H NIV L GA + LI + C G+L + K
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 166 SERAAANLC-RQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
E L ++ + + +HRDL N L + +K DFGL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGL 218
Query: 218 SVFFKPGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS 264
+ +D++ + YV APE L Y ++D+WS G++L+ + S
Sbjct: 219 A---------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
Query: 265 -GVPPFWG-ETEQSIFDAILRGH 285
GV P+ G + + + I G
Sbjct: 270 LGVNPYPGIPVDANFYKLIQNGF 292
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 3e-15
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+S E E+F D D G ++ E++ K T L + + + D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKL 61
Query: 427 DYIEFITATMHM 438
+F A H+
Sbjct: 62 SKDQFALA-FHL 72
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 4e-15
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
+ K+ F D +G I + L G + +E+ ++ + +D
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDME 57
Query: 430 EFI---TATMHMNRVEREEHLYKAFEYFDKDNS 459
+F+ + E K F+ FDKD +
Sbjct: 58 QFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDAT 90
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
EE + + F+ D D +G I EL+ L LG +LS E+ +L++ V +G ++
Sbjct: 74 DPEEFV---KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVN 129
Query: 428 YIEFI 432
Y +F+
Sbjct: 130 YHDFV 134
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-14
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS------ESEVRQLMEAADV 420
++ + L+ FK +D + G +T EL+ + L + + +L++ AD
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 421 DGNGTIDYIEFIT 433
+ +G I EF+
Sbjct: 61 NSDGKISKEEFLN 73
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 1e-14
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KL K L + + EI + F SG + E+ + S +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L D D NG I + EFIT +R EE L AFE +D ++
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHD 113
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-08
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 21/111 (18%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL------------PKLGTR 405
L + EE+ L F+ D ++ G ITF+E+ +
Sbjct: 87 TVLSTTSRGTLEEK---LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
E V+++ + D + +G I EF + + + A +D
Sbjct: 144 TPEMRVKKIFKLMDKNEDGYITLDEFREG------SKVDPSIIGALNLYDG 188
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 1e-05
Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K S E+ +F D DN+G I FEE L E ++ E
Sbjct: 49 VKIYKQFFPFGSPEDFA--NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFE 106
Query: 417 AADVDGNGTIDYIEF---ITATMHMNRVER---------EEHLYKAFEYFDKDN 458
D++ +G I + E + + M E + K F+ DK+
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNE 160
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 71.9 bits (176), Expect = 1e-14
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 353 NKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
L K L+ + SEEE+ + F +G IT ++ ++ K
Sbjct: 14 GALSKEILEELQLNTKFSEEELCSWYQSFL--KDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 411 -VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + + D + +GT+D+ E++ A + + L AF +D D +
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGN 121
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 47.3 bits (112), Expect = 2e-06
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 14/95 (14%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF---ITA 434
+F+S D++ GT+ F+E L + ++ DVDGNGTI E + A
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135
Query: 435 TMHMNRVER-----------EEHLYKAFEYFDKDN 458
M E E+ K ++YF K++
Sbjct: 136 IFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKND 170
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 5e-04
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 20/93 (21%)
Query: 375 LKEMFKSMDTDNSGTITFEEL--------KAGLPKLGTRLSESE------VRQLMEAADV 420
L+ F D D +GTI+ E+ K P+ L + E ++ +
Sbjct: 109 LEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGK 168
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453
+ + + EFI + + + ++
Sbjct: 169 NDDDKLTEKEFIEG------TLANKEILRLIQF 195
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 1e-14
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 58/264 (21%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN + R++G G FG + + + A K + ++ + D D +RE +
Sbjct: 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAAL 103
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL-----------FDRIIAKGHYSERA 169
M + NIV+L G + L+ + A G+L + +
Sbjct: 104 MAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 170 AANLCRQMVTVVH-------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
++ ++ Y +HRDL N L E+ +K DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFG 219
Query: 217 LSVFFKPGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILL 263
LS +++ + YY PE + Y E+D+W+ GV+L+ +
Sbjct: 220 LS---------RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 264 S-GVPPFWGETEQSIFDAILRGHI 286
S G+ P++G + + + G+I
Sbjct: 271 SYGLQPYYGMAHEEVIYYVRDGNI 294
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 1e-14
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+++E+ FK++ D +G I K K ++L E+ + E +D D +G +
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGAL 60
Query: 427 DYIEFITATMHM 438
EF A H+
Sbjct: 61 TLDEFCAA-FHL 71
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 2e-14
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 356 KKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-VR 412
+ L+ + N ++ E+ L FK + SG + E K + S
Sbjct: 2 RPEGLEQLEAQTNFTKRELQVLYRGFK--NEXPSGVVNEETFKQIYAQFFPHGDASTYAH 59
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L A D G++ + +F+TA + R E L F +D +
Sbjct: 60 YLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKD 106
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 6e-07
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 12/93 (12%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF---ITA 434
+F + DT +G++ FE+ L L ++R D++ +G I+ E + A
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 435 TMHMNRVER---------EEHLYKAFEYFDKDN 458
M +H+ F+ DK+
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNK 153
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 4e-06
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 18/93 (19%)
Query: 375 LKEMFKSMDTDNSGTITFEEL----KAGLPKLGTRLSESE--------VRQLMEAADVDG 422
L+ F D + G I EE+ KA +G V + D +
Sbjct: 94 LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNK 153
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+G + EF+ + + ++++ ++ + F
Sbjct: 154 DGIVTLDEFLES------XQEDDNIMRSLQLFQ 180
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 3e-14
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KLK ++ + +E+E+ + F SG + + + ++
Sbjct: 7 KLKPEVVEELTRKTYFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKF 64
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ D + +G I++ EFI A +R +E L AF+ +D DN
Sbjct: 65 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDND 113
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 4e-07
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 21/109 (19%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA------GLPKLGTRLSESE-- 410
AL V + +E+ L+ FK D DN G IT E+ + L E E
Sbjct: 88 ALSVTSRGTLDEK---LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT 144
Query: 411 ----VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
V ++ D + +G + EF + + + +A +D
Sbjct: 145 PEKRVDRIFAMMDKNADGKLTLQEFQEG------SKADPSIVQALSLYD 187
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 3e-06
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 12/93 (12%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF---ITA 434
+F D + G I F E L + ++R + D+D +G I E + A
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 435 TMHMNRVER---------EEHLYKAFEYFDKDN 458
M E+ + + F DK+
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNA 160
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 8e-14
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ + + +++F S D SG +T + + L + + L ++++ + +D+D +G +
Sbjct: 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGKL 65
Query: 427 DYIEFITATMHM 438
EFI A MH+
Sbjct: 66 TAEEFILA-MHL 76
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-13
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGNGT 425
S EEI G E+F + + I+ EELK + LG L S + +++E D +G+G
Sbjct: 3 SPEEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 426 IDYIEFIT 433
+ + EF+
Sbjct: 62 VSFEEFLV 69
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 4e-13
Identities = 15/118 (12%), Positives = 37/118 (31%), Gaps = 25/118 (21%)
Query: 367 LSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLGT---------------RLSESE 410
L++ + +K F D ++ G+I + + + + E E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVER---------EEHLYKAFEYFDKDNS 459
R L AD++ + + + E++ + + + F+ D
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGD 119
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 1e-12
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+L + +FK MD G + EE + L ++V + G
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154
Query: 425 TIDYIEFITA 434
T D +
Sbjct: 155 TFDLNRYKEL 164
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 1e-11
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++ EE + F S+ SG IT ++ + + + L + + Q+ AD++ +G +
Sbjct: 27 ITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGRM 83
Query: 427 DYIEFITATMHM 438
D +EF A M +
Sbjct: 84 DQVEFSIA-MKL 94
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 2e-11
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 12/92 (13%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGL----PKLGTRLSESEVRQLMEAADVDGNGTID 427
++ + +F+ + + G + +L + G +S E+ L+ D G +
Sbjct: 75 LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVS 132
Query: 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + M R E + K F KD
Sbjct: 133 FPSLVCFLM------RLEAMAKTFRNLSKDGK 158
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 6e-08
Identities = 16/114 (14%), Positives = 29/114 (25%), Gaps = 15/114 (13%)
Query: 373 MGLKEMFKSMDT---DNSGTITFEELKAGLPKLGTR------LSESEVRQLMEAADVDGN 423
MG + I +L+ L + S E R L+ ++ N
Sbjct: 1 MGSSHHHHHHSSGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVN 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477
G +D EF + H F+ + + +
Sbjct: 61 GRLDQEEFARLWKRLV------HYQHVFQKVQTSPGVLLSSDLWKAIENTDFLR 108
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-10
Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
++ ++ ++ ++ N+G + + A L K + L + + ++ + AD DG
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDG 58
Query: 423 NGTIDYIEFITATMHM 438
G + EF A + +
Sbjct: 59 KGVLSKQEFFVA-LRL 73
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 1e-09
Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 366 NLSEEEIMG--LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
++ + + + + + D + + F+ELK L +L ++ + R++ D
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNST 460
+++ E T + + R E + +AFE T
Sbjct: 62 DSLEDEEIETFYKMLTQ--RAE-IDRAFEEAAGSAET 95
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 2e-09
Identities = 71/461 (15%), Positives = 148/461 (32%), Gaps = 141/461 (30%)
Query: 88 HKDT---KQQFACKSISS--RKLINRD----DVEDVRREVQIMHHLTGHRNIVELKGAYE 138
H D + Q+ K I S + DV+D+ + + L+ E+
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI-----LSKE----EIDHIIM 56
Query: 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE- 197
+ +V+ + LF +++K + ++ V V L+
Sbjct: 57 SKDAVSGTL------RLFWTLLSKQ-------EEMVQKFVEEV------------LRINY 91
Query: 198 NFLFSSSAEDS--PLKATD---------FGLSVFFKPGDV-----FKDLVGSAYYVAPE- 240
FL S + P T + + F +V + L + + P
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 241 --VLRRNYG---------AEADIWSAGVILYILLSGVPPFW---GE--TEQSIFDAI--L 282
++ G A D+ + + + + FW + +++ + + L
Sbjct: 152 NVLI---DGVLGSGKTWVA-LDVCLSYKVQCKMDFKI--FWLNLKNCNSPETVLEMLQKL 205
Query: 283 RGHIDFSSDPWPNISS-------SAKDIVKKMLHADPKER--LSAAEVLNHPWMRVDGDA 333
ID + + SS S + ++++L + P E L VL + +A
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL----VLLNVQ-----NA 256
Query: 334 SD-KPLDIA----VLTRMKQ---FRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTD 385
+++ + TR KQ F + ++L + L+ +E+ L +
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY-----IEFITATMHM-- 438
+ E+ P+ LS ++ + DG T D + +T +
Sbjct: 317 DLP----REVLTTNPRR---LS------IIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 439 NRVEREE--HLYKAFEYFDKD-NSTSQWKSWNMRLRSIIWE 476
N +E E ++ F + + L S+IW
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTI-------LLSLIWF 397
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 1e-06
Identities = 73/520 (14%), Positives = 142/520 (27%), Gaps = 139/520 (26%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGP-PRPSSSATSATSSSVGRVLGKPMEDVR 66
PS T+++ D N ++ R +P +R
Sbjct: 105 PSMMTRMYIEQRDRLY------NDNQVFAKYNVSRL-----------------QPYLKLR 141
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDD-------VEDVRR 116
EL + ++ K A S K+ + D +++
Sbjct: 142 QAL---LELRPAK----NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA------- 169
++ L ++ HS N+ + + + R++ Y E
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCLLVLLNV 253
Query: 170 -------AANL-CRQMVT-----------VVHYCHSMGVMHRD--LKPENF-LFSS---- 203
A NL C+ ++T H H E L
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 204 SAEDSPLKATD---FGLSVF---FKPG------------DVFKDLVGSAY-YVAPEVLRR 244
+D P + LS+ + G D ++ S+ + P R+
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 245 NYGAEADIWSAGV-ILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPN------- 295
+ + ++ I ILLS W + +S ++ +S + P
Sbjct: 374 MFDRLS-VFPPSAHIPTILLS---LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429
Query: 296 ---ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD------IAV-LTR 345
+ K + LH + + + D LD I L
Sbjct: 430 SIYLELKVKLENEYALHRSIVDHYNIPKTF-DSD-----DLIPPYLDQYFYSHIGHHLKN 483
Query: 346 MKQFRAMNKLKKVAL-------KVIAENLSEEEIMGLK------EMFKSMDTDNSGTIT- 391
++ M + V L K+ ++ + + + +K DN
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER 543
Query: 392 -FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIE 430
+ LPK+ L S+ L+ A + + I + E
Sbjct: 544 LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI-FEE 582
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 2e-09
Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 22/189 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ G+ LGRG FG + T + A K + ++ + + E++I
Sbjct: 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKI 78
Query: 121 MHHLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+ H+ H N+V L GA + + +I++ C G L + +K + +
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN----EFVPYKTKGAR 134
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSS--------AEDSPLKATDFGLSVFFKPGDVF--KD 229
+G + DLK +SS E+ L + + D +
Sbjct: 135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEH 194
Query: 230 LVGSAYYVA 238
L+ ++ VA
Sbjct: 195 LICYSFQVA 203
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 3e-06
Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 35/227 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E + TYL + ++ + K R +D V + +++
Sbjct: 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFR--QGKDYVGAIPVDLKRRLDSITSSQSSAS 164
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G E++ ++ + + K + Q+ + + S +HRD
Sbjct: 165 SGFVEEKSLSDVEEEEA------PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 218
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------------APEV 241
L N L S E + +K DFGL+ +D+ YV APE
Sbjct: 219 LAARNILLS---EKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 242 LRRN-YGAEADIWSAGVILY-ILLSGVPPFWG-ETEQSIFDAILRGH 285
+ Y ++D+WS GV+L+ I G P+ G + ++ + G
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 313
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 5e-09
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 393 EELKAGLPKLGTRLSESEVR-QLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446
E L+ + K +S E++ + D DGN +D +E TA H+++ E E
Sbjct: 51 EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ 105
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 1e-07
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 14/90 (15%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL--------PKLGTRLSE 408
+ + +S +E+ FK D D + + EL + + +SE
Sbjct: 54 EGVINKPEAEMSPQEL--QLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSE 111
Query: 409 SEVRQL----MEAADVDGNGTIDYIEFITA 434
E+ + + D + +G IDY EF +
Sbjct: 112 DELINIIDGVLRDDDKNNDGYIDYAEFAKS 141
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 4e-08
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ E+ +F S+ +G ++ +++K L ++L + ++ E +D+D +G +
Sbjct: 9 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGML 65
Query: 427 DYIEFITATMHMNRVEREEH 446
D EF M + E+
Sbjct: 66 DRDEFAV-AMFLVYCALEKE 84
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 6e-08
Identities = 16/103 (15%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 366 NLSEEEIMGLKEMFK--------SMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
L+++EI+ F S+++ + FE++ + LP+L + + ++
Sbjct: 13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICRVFST 71
Query: 418 ADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
+ ++ + +F+ ++ + + + AF FD D+
Sbjct: 72 S--PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 112
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL-----GTRLSESEVRQL----MEAADVDGNGT 425
F+ D D+ GT+ E+L + L TRLS SE++QL +E +D+D +GT
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 426 IDYIEFITATMHMNRVEREEHLYKAF 451
I+ EF + R +F
Sbjct: 160 INLSEFQHV------ISRSPDFASSF 179
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 6e-08
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 350 RAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES 409
R +N+++ L A+ +S+E++ + F D +G + E+ +A L +G + E+
Sbjct: 702 RTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEA 761
Query: 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNR-VEREEHLYKAF 451
E ++M D + G + + FI + + + +F
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASF 804
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 1e-07
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I +F+ D D SG+++ E++ + G +L ++ Q++ A D ID+ F
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP-CQLHQVIVARFADDELIIDFDNF 664
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + + E L+K F+ D +N+
Sbjct: 665 VRCLVRL------EILFKIFKQLDPENT 686
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 2e-07
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I + ++K +TD SGTI EL G L+ + ++ D G +D+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDETGNMDFDNF 861
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
I+ + + + +++AF DK+ +
Sbjct: 862 ISCLVRL------DAMFRAFRSLDKNGT 883
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 52.6 bits (125), Expect = 1e-07
Identities = 39/283 (13%), Positives = 78/283 (27%), Gaps = 65/283 (22%)
Query: 60 KPMEDVRNTYIFG--RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVE 112
P T ++G G FG + T A K I+ + E
Sbjct: 11 VPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFE 68
Query: 113 DVRREVQIMHHLTG--------HRNIVELKGAY--------------------------- 137
++ E+ I L+ + L +
Sbjct: 69 EILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDR 128
Query: 138 ---EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH-SMGVMHRD 193
+ ++++ GG +++ K S A ++ Q+ + S+ HRD
Sbjct: 129 PDFFKDDQLFIVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRD 187
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIW 253
L N L ++ L T G S + +V +Y
Sbjct: 188 LHWGNVLLKKTS-LKKLHYTLNGKSSTIPSCGL-------------QVSIIDYTLSRLER 233
Query: 254 SAGVILYILLSGVPPFWGETEQS--IFDAILRGHIDFSSDPWP 294
V+ + F G+ + I+ + + + + + P
Sbjct: 234 DGIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHP 276
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 2e-07
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I +++++ +D D SGT+ E++ L + G +L ++ Q++ A D ID+ F
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDNF 662
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + + E L+K F+ D +N+
Sbjct: 663 VRCLVRL------EILFKIFKQLDPENT 684
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL-----GTRLSESEVRQL----MEAADVDGNGT 425
F+ D D+ GT+ E+L + L TRLS SE++QL +E +D+D +GT
Sbjct: 131 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 190
Query: 426 IDYIEFITA 434
I+ EF
Sbjct: 191 INLSEFQHV 199
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 19/117 (16%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFK--------SMDTDNSGTITFEELKAGLPKLG 403
+L K L + L+++EI+ F S+++ + FE++ + LP+L
Sbjct: 30 RLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELK 88
Query: 404 TRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNS 459
+ + ++ + ++ + +F+ + + + AF FD D+
Sbjct: 89 ANPFKERICRVFSTS--PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 143
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPGD---VFKDLVGSAYY 236
HY H+ ++HRD+K N L D TDFG+S D + + G+ Y
Sbjct: 153 HYLHTRAIIHRDVKSINILL-----DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGY 207
Query: 237 VAPEVLRRNYGAE-ADIWSAGVILYILLSGVPP 268
+ PE + E +D++S GV+L+ +L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-06
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-LGTRLSESE-VRQLMEAADVDGNG 424
++ LK +F+ + + ++ EELK + + L + L + D +G+G
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 425 TIDYIEFIT 433
+ + EF
Sbjct: 63 EVSFEEFQV 71
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 4e-06
Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGT 425
E+ + + +++ S+ N + ++LK L + + + D++ +G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 426 IDYIEFIT 433
+++ EF+
Sbjct: 66 VNFQEFLI 73
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 7e-06
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPGDVFKD------LVGSA 234
+ H +HRD+K N L D A +DFGL+ + + F +VG+
Sbjct: 148 FLHENHHIHRDIKSANILL-----DEAFTAKISDFGLA---RASEKFAQTVMTSRIVGTT 199
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPF 269
Y+APE LR ++DI+S GV+L +++G+P
Sbjct: 200 AYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 234
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 1e-05
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F S + + ELK L + LG R E+ ++LM D +
Sbjct: 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 77
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 78 RDNEVDFQEYCV 89
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-05
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F S + + ELK L + LG R E+ ++LM D +
Sbjct: 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 65
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 66 RDNEVDFQEYCV 77
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 3e-05
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F S + + ELK L + LG R E+ ++LM D +
Sbjct: 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSN 68
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 69 RDNEVDFQEYCV 80
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 4e-05
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
++ E+F ++ +G IT K + K ++L + + ++ + ADVD +G +D
Sbjct: 46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK--SKLPNTVLGKIWKLADVDKDGLLD 102
Query: 428 YIEFITATMHM 438
EF H+
Sbjct: 103 DEEFAL-ANHL 112
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 6e-05
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 369 EEEIMGLKEMFK---SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADV 420
E+ ++ L E F S + I+ + L K L + +L++ D
Sbjct: 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA 66
Query: 421 DGNGTIDYIEFIT 433
+ +G I + E+ T
Sbjct: 67 NHDGRISFDEYWT 79
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 8e-05
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGN 423
E + + F D G +T E+L+ + K L + V ++M+ D +
Sbjct: 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 424 GTIDYIEFIT 433
G + + F +
Sbjct: 64 GKVGFQSFFS 73
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGL-----PKLGTRLSESEVRQLMEAADVD 421
EE + G+ +F S+ + T++ ELK L + ++ + ++ + D +
Sbjct: 8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 67
Query: 422 GNGTIDYIEFIT 433
+ +D+ EFI+
Sbjct: 68 QDEQVDFQEFIS 79
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 2e-04
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ ++ L ++F S + + ELK + L + V ++ME D +
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSN 64
Query: 422 GNGTIDYIEFIT 433
G+G D+ EF+
Sbjct: 65 GDGECDFQEFMA 76
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 2e-04
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK--LGTRLSESEVRQLMEAADVDGNG 424
E+ + + F S + T++ +ELK + K + ES + LM++ D + +
Sbjct: 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQ 65
Query: 425 TIDYIEFIT 433
ID+ E+
Sbjct: 66 EIDFKEYSV 74
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 2e-04
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK---LGTRLSESEVRQLMEAADVDGN 423
++ I L +F S + T++ +ELK + K +G++L ++E+ +LME D + +
Sbjct: 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 65
Query: 424 GTIDYIEFIT 433
+++ E++T
Sbjct: 66 QEVNFQEYVT 75
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + L +F S + ++ +ELK L L + V ++M+ D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN 64
Query: 422 GNGTIDYIEFIT 433
G+G +D+ EF+
Sbjct: 65 GDGEVDFQEFVV 76
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 3e-04
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E I L +F+ + N+ I+ E + + + ++M+ D+D
Sbjct: 9 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLD 68
Query: 422 GNGTIDYIEFIT 433
+G +D+ EF+
Sbjct: 69 SDGQLDFQEFLN 80
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + + ++F S ++ T+T ELK + K L + + V +L++ D +
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN 64
Query: 422 GNGTIDYIEFIT 433
G+ +D+ EFI
Sbjct: 65 GDAQVDFSEFIV 76
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 3e-04
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 376 KEMFKSMD---TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF- 431
+MF S+ +T +ELK +L + ++ +R + D + +G + E
Sbjct: 62 VQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVK 121
Query: 432 --ITATMHMNRVER-----EEHLYKAFEYFDKDNS 459
I + N++ + +E+ E D N
Sbjct: 122 EIIALSASANKLSKIKERADEYTALIMEELDPTNL 156
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 54/224 (24%), Positives = 82/224 (36%), Gaps = 55/224 (24%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LGRG FG Y D A K + + + + EV+++ HRN++ L+
Sbjct: 38 LGRGGFGKVYKGRLAD-GTLVAVKRLKEERTQGGEL--QFQTEVEMISMAV-HRNLLRLR 93
Query: 135 G----------AYE-------DRHSVNLIMDLCAGGELFD---RI-IAKGHYSERAAANL 173
G Y + + D R IA G +A L
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASC----LRERPESQPPLDWPKRQRIALG-----SARGL 144
Query: 174 CRQMVTVVHYCH---SMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPGD--V 226
Y H ++HRD+K N L D +A DFGL+ D V
Sbjct: 145 A--------YLHDHCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHV 191
Query: 227 FKDLVGSAYYVAPEVLRRNYGAE-ADIWSAGVILYILLSGVPPF 269
+ G+ ++APE L +E D++ GV+L L++G F
Sbjct: 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 38.3 bits (89), Expect = 5e-04
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + L +F S + ++ ELK L L ++ V ++M D +
Sbjct: 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSN 65
Query: 422 GNGTIDYIEFIT 433
+ +D+ EF+
Sbjct: 66 KDNEVDFNEFVV 77
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 38.4 bits (89), Expect = 6e-04
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 16/77 (20%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE----------------VRQLMEAA 418
K F D ++ G + +EL+A K ++ + + +M+
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 81
Query: 419 DVDGNGTIDYIEFITAT 435
D + + + EF+ +T
Sbjct: 82 DTNQDRLVTLEEFLAST 98
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 38.3 bits (89), Expect = 6e-04
Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F+ + + + ELK L K T E + + M D +
Sbjct: 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 65
Query: 422 GNGTIDYIEFIT 433
+ +D++E++
Sbjct: 66 KDCEVDFVEYVR 77
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 480 | |||
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.96 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.93 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.86 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.82 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.81 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.77 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.73 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.71 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.71 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.7 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.7 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.7 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.7 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.68 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.66 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.64 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.64 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.64 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.63 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.62 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.62 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.62 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.62 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.61 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.61 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.6 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.6 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.59 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.59 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.59 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.57 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.56 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.55 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.55 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.55 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.53 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.53 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.53 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.53 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.53 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.52 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.52 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.52 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.52 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.52 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.52 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.52 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.51 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.51 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.5 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.49 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.49 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.49 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.48 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.48 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.48 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.47 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.47 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.47 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.47 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.46 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.46 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.45 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.44 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.44 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.44 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.44 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.44 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.44 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.44 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.43 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.43 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.43 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.43 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.42 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.42 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.42 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.42 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.42 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.41 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.4 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.4 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.4 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.4 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.39 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.39 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.39 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.38 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.38 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.38 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.38 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.37 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.37 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.36 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.35 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.35 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.34 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.34 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.34 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.34 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.33 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.32 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.32 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.32 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.31 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.31 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.3 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.29 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.29 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.29 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.28 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.28 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.27 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.27 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.27 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.26 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.26 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.26 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.26 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.26 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.25 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.25 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.25 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.25 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.24 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.23 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.23 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.23 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.22 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.22 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.21 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.21 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.21 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.2 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.2 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.2 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.2 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.2 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.2 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.2 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.19 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.19 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.19 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.18 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.18 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.18 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.18 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.17 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.17 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.17 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.17 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.16 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.16 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.16 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.16 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.15 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.15 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.14 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.14 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.14 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.14 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.13 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.13 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.13 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 99.13 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.13 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.12 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.12 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.12 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.12 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.12 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.12 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.12 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.11 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.11 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.11 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.11 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.1 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.09 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.09 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.09 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.09 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.09 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.09 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.08 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 99.08 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.08 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.08 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.08 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.08 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.08 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.07 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.07 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.06 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.05 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.05 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.05 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.04 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.04 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.04 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.03 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.03 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.03 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.03 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.02 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.01 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.01 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.01 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.01 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.01 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 99.0 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.0 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 98.99 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 98.99 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 98.99 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 98.99 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 98.99 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 98.99 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 98.99 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 98.99 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 98.98 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 98.97 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 98.97 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 98.96 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 98.96 | |
| 1k8u_A | 90 | S100A6, calcyclin, CACY; calcium regulatory protei | 98.95 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 98.95 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 98.94 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 98.94 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 98.94 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 98.92 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 98.92 | |
| 1psr_A | 100 | Psoriasin, S100A7; EF-hand protein, MAD phasing, p | 98.92 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 98.91 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 98.9 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 98.9 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 98.89 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 98.89 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.86 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 98.84 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 98.84 | |
| 1qls_A | 99 | S100C protein, calgizzarin; metal-binding protein/ | 98.84 | |
| 3fia_A | 121 | Intersectin-1; EH 1 domain, NESG, structural genom | 98.84 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 98.83 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 98.81 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.81 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 98.81 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 98.79 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.79 |
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-74 Score=588.59 Aligned_cols=410 Identities=38% Similarity=0.635 Sum_probs=367.6
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|++.+.||+|+||+||+|.++.+++.||||++...........+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 100 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGY 100 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSE
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCE
Confidence 456678999999999999999999999999999999997665544556788999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++|||||.|++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus 101 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999999999998999999999999999999999999999999999999999766677889999999998877
Q ss_pred CCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
........+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+....+....+..+...++.+.|..+|+++++
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260 (484)
T ss_dssp CCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHH
T ss_pred cccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHH
Confidence 66666677899999999999888999999999999999999999999999999999999999888887778889999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCCC---CCCcccHHHHHHHHhhhhhhHHHHHHHHHHhhhh-hHHHHhhHHHh
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDA---SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEM 378 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 378 (480)
||.+||+.||.+|||+.++|+||||+..... ...+.....+.++++|....++.+..+.++...+ ++++.+.++++
T Consensus 261 li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~~ 340 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAI 340 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 9999999999999999999999999865432 2334456678889999999999999999998765 88999999999
Q ss_pred hcccCCCCCCcccHHHH----hhhhcccCCCCC-------HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 379 FKSMDTDNSGTITFEEL----KAGLPKLGTRLS-------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 379 F~~~D~~~~g~i~~~e~----~~~l~~~~~~~~-------~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
|..+|.|+||.|+.+|| ..+++.+|..++ ..+++.+|..+|.|++|.|+|+||+.++........++.+
T Consensus 341 F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~ 420 (484)
T 3nyv_A 341 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERL 420 (484)
T ss_dssp HHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHH
Confidence 99999999999999999 556666788777 8899999999999999999999999987766556677889
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
..+|+.||+|+||+|+.+|++.+...
T Consensus 421 ~~~F~~~D~d~dG~I~~~El~~~l~~ 446 (484)
T 3nyv_A 421 ERAFRMFDSDNSGKISSTELATIFGV 446 (484)
T ss_dssp HHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 99999999999999999999888753
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-73 Score=588.95 Aligned_cols=410 Identities=34% Similarity=0.596 Sum_probs=364.1
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh----------hcHHHHHHHHHHHHHccCCCCee
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR----------DDVEDVRREVQIMHHLTGHRNIV 131 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~hp~iv 131 (480)
...+.++|.+++.||+|+||+||+|.++.+++.||||++........ ...+.+.+|+.+++++. ||||+
T Consensus 31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv 109 (504)
T 3q5i_A 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNII 109 (504)
T ss_dssp CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-CTTBC
T ss_pred CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-CCCCC
Confidence 34567889999999999999999999999999999999976543211 34577899999999998 99999
Q ss_pred EEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 132 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
++++++.+...+++|||||+|++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++..+....+|
T Consensus 110 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred eEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999999999999999888999999999999999999999999999999999999997655555799
Q ss_pred EeecccceecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC
Q 011647 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291 (480)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 291 (480)
|+|||++............+||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+..+...++..
T Consensus 190 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 269 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN 269 (504)
T ss_dssp ECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHH
T ss_pred EEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence 99999999877666666778999999999998889999999999999999999999999999999999999988877766
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC---CcccHHHHHHHHhhhhhhHHHHHHHHHHhhhh-
Q 011647 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD---KPLDIAVLTRMKQFRAMNKLKKVALKVIAENL- 367 (480)
Q Consensus 292 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~- 367 (480)
.|+.+|+++.+||.+||+.||.+|||+.++|+||||+....... .......+.++++|...+++.+..+.++..++
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~ 349 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLT 349 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHTS
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 77889999999999999999999999999999999987654332 12234567788999999999999999998776
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc--------CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL--------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN 439 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~--------~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 439 (480)
++++..+++++|+.||.|+||.|+.+||..++..+ |...+..+++.+|..+|.|++|.|+|+||+.++....
T Consensus 350 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 429 (504)
T 3q5i_A 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQ 429 (504)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH
T ss_pred cHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhh
Confidence 89999999999999999999999999999999887 5677889999999999999999999999999987766
Q ss_pred ccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 440 RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 440 ~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
....++.+..+|+.||+|++|+|+.+|++.+..
T Consensus 430 ~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~ 462 (504)
T 3q5i_A 430 ILFSEERLRRAFNLFDTDKSGKITKEELANLFG 462 (504)
T ss_dssp HHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTT
T ss_pred cccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 667788999999999999999999999988753
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-73 Score=586.61 Aligned_cols=410 Identities=37% Similarity=0.641 Sum_probs=358.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++..... .......+.+|+.+++++. ||||+++++++.+...+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 96 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSF 96 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH-BCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCEE
Confidence 456789999999999999999999999999999999865432 2234578899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++|||||.|++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++.....
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999999999999999888999999999999999999999999999999999999998766778899999999987766
Q ss_pred CCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
.......+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+....+....+..+...++.+.|..+|+++.+|
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp C----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred CCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence 65566778999999999999889999999999999999999999999999999999999988888877788899999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCCCCCC----cccHHHHHHHHhhhhhhHHHHHHHHHHhhhh-hHHHHhhHHHh
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDK----PLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEM 378 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 378 (480)
|.+||+.||.+|||+.++|+||||+........ +.....+.++++|....++++..+.++..++ +.+++.+++++
T Consensus 257 i~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~ 336 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEI 336 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 999999999999999999999999876544322 2224467788999999999999999998776 88999999999
Q ss_pred hcccCCCCCCcccHHHHhhhhc----ccCCCCC----------HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 379 FKSMDTDNSGTITFEELKAGLP----KLGTRLS----------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 379 F~~~D~~~~g~i~~~e~~~~l~----~~~~~~~----------~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
|..||.|+||.|+.+||..++. .+|..++ ..+++.+|..+|.|++|.|+|+||+.++........+
T Consensus 337 F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~ 416 (486)
T 3mwu_A 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSR 416 (486)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCH
T ss_pred HHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchH
Confidence 9999999999999999965554 4566655 8899999999999999999999999988776666778
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.||+|+||+|+.+|++.+...++
T Consensus 417 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g 447 (486)
T 3mwu_A 417 ERMERAFKMFDKDGSGKISTKELFKLFSQAD 447 (486)
T ss_dssp HHHHHHHHHHCSSCSSSBCSSCC--------
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 8999999999999999999999999888765
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-73 Score=588.30 Aligned_cols=410 Identities=36% Similarity=0.614 Sum_probs=361.8
Q ss_pred cccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 61 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
....+.++|.+++.||+|+||+||+|+++.++..||||++...... ......+.+|+.+++.+. ||||+++++++.+.
T Consensus 31 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~ 108 (494)
T 3lij_A 31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLD-HPNIMKLYDFFEDK 108 (494)
T ss_dssp CBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCC-CTTBCCEEEEEECS
T ss_pred CCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeC
Confidence 3345667899999999999999999999999999999999765432 233577899999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..+|+|||||.||+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++..
T Consensus 109 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 109 RNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999999999999888999999999999999999999999999999999999998766677899999999998
Q ss_pred cCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
..........+||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+..+...++.+.|+.+|+++
T Consensus 189 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 268 (494)
T 3lij_A 189 FENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268 (494)
T ss_dssp CBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHH
T ss_pred CCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHH
Confidence 77665666778999999999998889999999999999999999999999999999999999998888888888999999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccCC----CCCCcccHHHHHHHHhhhhhhHHHHHHHHHHhhhh-hHHHHhhH
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGD----ASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGL 375 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 375 (480)
.+||.+||+.||.+|||+.++|+||||+.... ....+.....++++++|....++.+..+.++...+ +++++.++
T Consensus 269 ~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~l 348 (494)
T 3lij_A 269 KDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKEL 348 (494)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHHH
Confidence 99999999999999999999999999975311 11222334567889999999999999999998776 89999999
Q ss_pred HHhhcccCCCCCCcccHHHHhhhhcccCC--------CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 376 KEMFKSMDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
+++|+.||.|+||.|+.+||..++..++. ..+..+++.+|..+|.|++|.|+|+||+.++........++.+
T Consensus 349 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~ 428 (494)
T 3lij_A 349 TDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKL 428 (494)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHH
T ss_pred HHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHH
Confidence 99999999999999999999999998854 4557899999999999999999999999998776666778899
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..+|+.||+|+||+|+.+|++++..
T Consensus 429 ~~~F~~~D~d~~G~Is~~El~~~l~ 453 (494)
T 3lij_A 429 ESAFQKFDQDGNGKISVDELASVFG 453 (494)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHC-
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 9999999999999999999988754
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-66 Score=494.24 Aligned_cols=255 Identities=33% Similarity=0.605 Sum_probs=233.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+++|++++ |||||+++++|++++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999998765545556788999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC--
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-- 224 (480)
||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 45778999999999987533
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
....+.+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+.+..+++..+..+.+.++. .+|+++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~----~~s~~~~d 263 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE----KFFPKARD 263 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----TCCHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc----ccCHHHHH
Confidence 23456799999999999975 5899999999999999999999999999999999999988776653 68999999
Q ss_pred HHHHhcccCcCCCCCHHH------HhcCCcccc
Q 011647 303 IVKKMLHADPKERLSAAE------VLNHPWMRV 329 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~------~l~h~~~~~ 329 (480)
||.+||++||++|||++| +++||||+.
T Consensus 264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~ 296 (311)
T 4aw0_A 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296 (311)
T ss_dssp HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence 999999999999999988 589999974
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-65 Score=495.10 Aligned_cols=259 Identities=29% Similarity=0.515 Sum_probs=230.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|++.++||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.+|++++ |||||+++++|.+++.+|
T Consensus 72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ 147 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 147 (346)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 45679999999999999999999999999999999975443 23466889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||||+||+|.+++.. +.+++..++.|+.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 148 ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 148 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCCC
Confidence 99999999999998865 579999999999999999999999999999999999999 45778999999999976543
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......+||+.|||||++.+ .|+.++|||||||++|||++|.+||.+.+..+.+..+..... .....+..+|+++++
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~d 302 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKG 302 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHHH
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHHH
Confidence 34567899999999999875 599999999999999999999999999998888888776533 233345679999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
||.+||++||++|||++|+|+||||+....
T Consensus 303 li~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 303 FLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 999999999999999999999999987543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-65 Score=480.45 Aligned_cols=255 Identities=35% Similarity=0.642 Sum_probs=215.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.++++++ |||||++++++.+++.+|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999998766555566788999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|||| +|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCc
Confidence 9999 67999999999999999999999999999999999999999999999999 4567899999999988766666
Q ss_pred cccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
..+.+||+.|||||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+..+...++ ..+|+++++||
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 243 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLI 243 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 6678999999999999754 46899999999999999999999999999999999988776654 36899999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCccccc
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+||++||++|||++|+|+||||+.+
T Consensus 244 ~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHccCChhHCcCHHHHHcCcccccC
Confidence 99999999999999999999999864
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-64 Score=486.06 Aligned_cols=256 Identities=25% Similarity=0.539 Sum_probs=223.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|++|+ |||||++++++++++.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEE
Confidence 689999999999999999999999999999999976543 4455788999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+||+|.+++...+ .+++..++.|+.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecCC
Confidence 99999999999997543 57999999999999999999999999999999999999 45678999999999876533
Q ss_pred C-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. .....+||+.|||||++.+ .|+.++|||||||++|||++|+.||.+.+..+.+..+..+..+. .+..+|+++++
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~s~~~~~ 255 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP---VSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CCTTSCHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC---CCccCCHHHHH
Confidence 2 2345689999999999975 59999999999999999999999999999999999888876532 23578999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
||.+||++||++|||++|+|+||||+..
T Consensus 256 li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 9999999999999999999999999753
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-63 Score=494.09 Aligned_cols=259 Identities=29% Similarity=0.515 Sum_probs=230.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|++.+.||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.+|++++ |||||+++++|.+++.+|
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ 224 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 224 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCC-CCCCCceEEEEEECCEEE
Confidence 45679999999999999999999999999999999975432 33467889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||||+||+|.+++.. +.+++..++.|+.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+...
T Consensus 225 iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp EEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECCCC
Confidence 99999999999998754 579999999999999999999999999999999999999 45678999999999976543
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+..... .....+..+|+++++
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~d 379 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKG 379 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHHHH
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHHHH
Confidence 34567899999999999875 599999999999999999999999999999888888876543 233445689999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
||.+||..||++|||++|+|+||||+....
T Consensus 380 li~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 380 FLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 999999999999999999999999987543
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-63 Score=470.43 Aligned_cols=254 Identities=22% Similarity=0.430 Sum_probs=220.2
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----CCeEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RHSVN 144 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----~~~~~ 144 (480)
|++.++||+|+||+||+|.++.+++.||+|++..... .....+.+.+|+.++++++ |||||+++++|.+ +..+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETTEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCCCcEEE
Confidence 4788899999999999999999999999999976543 4455688999999999998 9999999999865 35689
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
||||||+||+|.+++.+.+.+++..+..|+.||+.||.|||++| ||||||||+|||++ +.++.+||+|||+|+...
T Consensus 106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCCEeCC
Confidence 99999999999999999999999999999999999999999999 99999999999995 235789999999998643
Q ss_pred CCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.....+.+||+.|||||++.+.|+.++|||||||++|||+||+.||.+... ..+...+..+..+ ......++++++
T Consensus 184 -~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~ 260 (290)
T 3fpq_A 184 -ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVK 260 (290)
T ss_dssp -TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHH
T ss_pred -CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--CCCCccCCHHHH
Confidence 344567899999999999998899999999999999999999999977554 4455555544322 122346789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
+||.+||++||++|||++|+|+||||+.
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHccCChhHCcCHHHHhcCccccC
Confidence 9999999999999999999999999984
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-63 Score=473.98 Aligned_cols=254 Identities=30% Similarity=0.533 Sum_probs=220.6
Q ss_pred cceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
++|++++.||+|+||+||+|++. .+++.||||++.+.... ......+.+|+.+|++++ |||||++++++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-VRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-EEECC------CCCCCCC-CTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-hHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEE
Confidence 57999999999999999999984 46889999999765432 223356889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|||||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC---
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999 5577899999999986543
Q ss_pred -CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 -GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 -~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+.+....++ ..+|++++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 254 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHH
Confidence 334456789999999999865 589999999999999999999999999999999999988776554 36899999
Q ss_pred HHHHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+||.+||++||++||| ++|+++||||+.
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 9999999999999998 589999999974
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-62 Score=468.61 Aligned_cols=255 Identities=26% Similarity=0.363 Sum_probs=222.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|.+.++||+|+||+||+|+++.+|+.||||++..... ..+|+.++++++ |||||++++++.+++.+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~-HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLS-SPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCC-CCCCCcEEEEEEECCEEEE
Confidence 3568999999999999999999999999999999975432 246999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC-CeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~-~ikl~Dfg~a~~~~~~ 224 (480)
|||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++ .++ .+||+|||+|+.....
T Consensus 128 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS---SDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC---TTSCCEEECCCTTCEEC---
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe---CCCCEEEEeeCCCCeEccCC
Confidence 999999999999999999999999999999999999999999999999999999995 343 6999999999976543
Q ss_pred Cc------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 DV------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~~------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. ....+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..++...+.....++. ..++.+|
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s 283 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCA 283 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSC
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCC
Confidence 21 233589999999999875 599999999999999999999999998887777777777655432 2346799
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHH-------------hcCCcccccCCC
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEV-------------LNHPWMRVDGDA 333 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~-------------l~h~~~~~~~~~ 333 (480)
+++.+||.+||++||.+|||+.|+ |+|||+.....+
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P 332 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP 332 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence 999999999999999999999997 579999866544
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-61 Score=477.44 Aligned_cols=264 Identities=28% Similarity=0.435 Sum_probs=225.3
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~---- 139 (480)
.+.++|.+++.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+++|++++ |||||++++++..
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 128 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPY 128 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCT
T ss_pred CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcC-CCCcceEeeeeeccccc
Confidence 34578999999999999999999999999999999997543 23445677889999999998 9999999998753
Q ss_pred --CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+.+|||||||. |+|.+++.+.+.+++..++.+++||+.||.|||++|||||||||+|||+ +.++.+||+|||+
T Consensus 129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGl 204 (398)
T 4b99_A 129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGM 204 (398)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeecce
Confidence 467999999995 6899999988999999999999999999999999999999999999999 4577899999999
Q ss_pred ceecCCC-----CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC
Q 011647 218 SVFFKPG-----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (480)
Q Consensus 218 a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (480)
|+.+... ....+.+||+.|||||++.+ .++.++||||+||++|||++|++||.+.+..+.+..|......++.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9875332 23456799999999998764 4799999999999999999999999999988888777543222111
Q ss_pred C---------------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 291 D---------------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 291 ~---------------------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
. .++.+++++.+||.+||..||++|||++|+|+||||+....+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p 354 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 354 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCG
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCC
Confidence 0 124678999999999999999999999999999999875543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-58 Score=476.50 Aligned_cols=266 Identities=35% Similarity=0.622 Sum_probs=242.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+++.||+|+||+||+|.++.+|+.||+|++... .....+.+.+|+.+|+.++ |||||+++++|.+++.+
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~ 229 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEM 229 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTC-CTTBCCEEEEEECSSEE
T ss_pred cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 3457899999999999999999999999999999998653 2344577899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|||||||+||+|.+++.. .+.+++..++.+++||+.||.|||++||+||||||+|||++.+ ..+.+||+|||+|+.+.
T Consensus 230 ~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECC
T ss_pred EEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEcc
Confidence 999999999999999864 4679999999999999999999999999999999999999642 34789999999999987
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
........+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......++...++.+|++++
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 388 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHH
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 7777777899999999999875 489999999999999999999999999999999999999888888878889999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
+||.+||+.||.+|||+.|+|+||||+....+.
T Consensus 389 dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~ 421 (573)
T 3uto_A 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421 (573)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred HHHHHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence 999999999999999999999999998765543
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-58 Score=449.60 Aligned_cols=256 Identities=25% Similarity=0.464 Sum_probs=210.8
Q ss_pred ccccceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.+.++|++.+.||+|+||+||+|+++ .+++.||||.+.+. ....++.+|+++|+.+.+|||||++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 46688999999999999999999875 45789999988643 23467889999999997799999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++|+|||||+||+|.+++ +.+++..++.+++||+.||+|||++|||||||||+|||++. +.+.+||+|||+|+.
T Consensus 93 ~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~--~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR--RLKKYALVDFGLAQG 167 (361)
T ss_dssp TEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEE
T ss_pred CEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC--CCCeEEECcCCCCcc
Confidence 9999999999999999988 46999999999999999999999999999999999999963 346799999999986
Q ss_pred cCCCC-----------------------------ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCC
Q 011647 221 FKPGD-----------------------------VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPF 269 (480)
Q Consensus 221 ~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf 269 (480)
..... .....+||+.|||||++.+ .++.++||||+||++|+|++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 54321 1234589999999998864 4899999999999999999999999
Q ss_pred CCCC-hHHHHHHHHcC--------------------------------------CC------------cCCCCCCCCCCH
Q 011647 270 WGET-EQSIFDAILRG--------------------------------------HI------------DFSSDPWPNISS 298 (480)
Q Consensus 270 ~~~~-~~~~~~~~~~~--------------------------------------~~------------~~~~~~~~~~~~ 298 (480)
.... +.+.+..+... .. ......|..+|+
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 6544 33333333210 00 011123567899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
++.+||.+||+.||++|||++|+|+||||+.
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 9999999999999999999999999999973
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-58 Score=440.28 Aligned_cols=252 Identities=28% Similarity=0.440 Sum_probs=199.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-----
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH----- 141 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~----- 141 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+.+|++++ |||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCccccc
Confidence 46999999999999999999999999999999986432 3344578999999999998 999999999987544
Q ss_pred -------eEEEEEecCCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 142 -------SVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 142 -------~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
.+|||||||+||+|.+++...+. .++..++.|+.||+.||+|||++|||||||||+|||+ +.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCcEE
Confidence 47999999999999999987665 4456788999999999999999999999999999999 4567899
Q ss_pred EeecccceecCCCCc-------------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-H
Q 011647 212 ATDFGLSVFFKPGDV-------------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-S 276 (480)
Q Consensus 212 l~Dfg~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~ 276 (480)
|+|||+|+....... ....+||+.|||||++.+ .|+.++|||||||++|||++ ||.+..+. .
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 999999987643321 234589999999999875 59999999999999999996 78653322 2
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+..+..... + +.++..++.+.+||.+||++||++|||+.|+|+||||+..
T Consensus 236 ~~~~~~~~~~--p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 236 TLTDVRNLKF--P-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHTTCC--C-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHhcCCC--C-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 2233333222 1 1123456778999999999999999999999999999854
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-57 Score=469.52 Aligned_cols=255 Identities=27% Similarity=0.446 Sum_probs=220.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHH---HHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE---VQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e---~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.++|.+++.||+|+||+||+|+++.+|+.||||++.+...........+.+| +.+++.+. |||||+++++|++.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-CCCEeEEEEEEEECCE
Confidence 4679999999999999999999999999999999976544333333444444 55555566 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||| +.++++||+|||+|+...
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999 567889999999999875
Q ss_pred CCCccccCCCCcccccccccc-c-cCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. ...+.+||+.|||||++. + .|+.++|||||||++|||++|.+||.+.. ...+...+......++ ..+|
T Consensus 344 ~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~~~S 418 (689)
T 3v5w_A 344 KK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFS 418 (689)
T ss_dssp SC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----TTSC
T ss_pred CC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----ccCC
Confidence 43 345679999999999985 3 58999999999999999999999997643 3445556666555443 4689
Q ss_pred HHHHHHHHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+++++||.+||++||.+|++ ++|+++||||+.
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence 99999999999999999998 799999999974
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-57 Score=432.34 Aligned_cols=255 Identities=22% Similarity=0.410 Sum_probs=208.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..+.+.++++||+|+||+||+|++.. .||||+++... .+....+.+.+|+.++++++ |||||++++++. ++.++
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~-~~~~~ 107 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMT-KDNLA 107 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecC-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEE-CCeEE
Confidence 34678899999999999999998753 59999986433 34556788999999999998 999999999875 46789
Q ss_pred EEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||||+||+|.+++... +.+++..+..|+.||+.||.|||++|||||||||+|||+ ++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCceeccc
Confidence 999999999999999764 579999999999999999999999999999999999999 4567899999999987543
Q ss_pred C---CccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC--CCCCC
Q 011647 224 G---DVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS--SDPWP 294 (480)
Q Consensus 224 ~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~ 294 (480)
. ......+||+.|||||++.+ .++.++|||||||+||||+||+.||.+.+....+..+.......+ ...++
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~ 264 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK 264 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccc
Confidence 2 23345689999999999853 488899999999999999999999988765544444433322222 23346
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHh------cCCccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVL------NHPWMR 328 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l------~h~~~~ 328 (480)
.+|+++.+||.+||+.||++|||+.+++ +|++-+
T Consensus 265 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 7899999999999999999999999875 566544
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-57 Score=433.34 Aligned_cols=251 Identities=22% Similarity=0.424 Sum_probs=215.4
Q ss_pred ccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
+++|.+.+.||+|+||+||+|++. .++..||||++... .....+.+.+|+++|++++ |||||++++++.++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEG 87 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeC
Confidence 467999999999999999999875 35788999998643 3445678999999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK-------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
+.++||||||++|+|.+++... ..+++..+..|+.||+.||.|||+++||||||||+|||+ +.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCC
Confidence 9999999999999999999764 369999999999999999999999999999999999999 456
Q ss_pred CCeeEeecccceecCCCCcc---ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011647 208 SPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~ 282 (480)
+.+||+|||+|+........ ....||+.|||||++. +.++.++|||||||++|||+| |+.||.+.+..++...+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 78999999999875433321 2346899999999986 469999999999999999998 899999999999888888
Q ss_pred cCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.+.... ..+.+|+++.+|+.+||+.||++|||+.+++ +|++
T Consensus 245 ~~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~ 285 (299)
T 4asz_A 245 QGRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQ 285 (299)
T ss_dssp HTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHH
T ss_pred cCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHH
Confidence 765422 2246899999999999999999999999994 4554
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-56 Score=433.52 Aligned_cols=249 Identities=22% Similarity=0.396 Sum_probs=209.2
Q ss_pred ccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
..+|.+.++||+|+||+||+|+++ .+++.||||++... +....+.+.+|+++|++++ |||||++++++.+.
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~ 115 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQ-HQHIVRFFGVCTEG 115 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEEC
Confidence 357889999999999999999875 35789999999643 3455678999999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK---------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
+.+|||||||++|+|.+++... +++++..+..|+.||+.||.|||+++||||||||+|||+ +
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl---~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---G 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---E
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE---C
Confidence 9999999999999999998753 358999999999999999999999999999999999999 4
Q ss_pred CCCCeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
.++.+||+|||+|+...... .....+||+.|||||++.+ .++.++|||||||+||||+| |+.||.+.+..+.+..
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 272 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 57789999999998764332 2234679999999999865 59999999999999999999 8999999998888888
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+..+... .....+|+++.+|+.+||+.||++|||+.|++++
T Consensus 273 i~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 273 ITQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp HHHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred HHcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 8776422 1224689999999999999999999999999763
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=429.30 Aligned_cols=250 Identities=22% Similarity=0.378 Sum_probs=215.6
Q ss_pred ccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...+++.++||+|+||+||+|... .+++.||||++.... .....+.+.+|+.++++++ |||||++++++.++
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~ 101 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKD 101 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCC-CTTBCCEEEEECSS
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCC-CCCCCCcceEEEEC
Confidence 356889999999999999999864 357889999986432 3345678999999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~ 204 (480)
+.++||||||++|+|.++|... ..+++..+..|+.||+.||.|||+++||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl--- 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV--- 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---
Confidence 9999999999999999999653 358999999999999999999999999999999999999
Q ss_pred CCCCCeeEeecccceecCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 011647 205 AEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279 (480)
Q Consensus 205 ~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~ 279 (480)
++++.+||+|||+|+...... .....+||+.|||||++. +.++.++|||||||+||||+| |..||.+.+..++..
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~ 258 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 456789999999998764332 234568999999999886 569999999999999999998 899999999998888
Q ss_pred HHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+..+.... ..+.+|+++.+|+.+||+.||++|||+.+|+++
T Consensus 259 ~i~~~~~~~---~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 259 MIRNRQVLP---CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 887765322 235789999999999999999999999999874
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-56 Score=437.53 Aligned_cols=300 Identities=36% Similarity=0.694 Sum_probs=265.0
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|.+.+.||+|+||+||+|.++.+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~ 102 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESF 102 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCE
Confidence 3456789999999999999999999999999999999976443 4455678999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.|+|||||.|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++....
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999999999888889999999999999999999999999999999999999876666789999999998876
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++...|..+++++.
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 262 (362)
T 2bdw_A 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262 (362)
T ss_dssp TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHH
T ss_pred CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 6555566789999999999875 589999999999999999999999999999999999999888888877888999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHh
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 364 (480)
+||.+||..||++|||+.++|+||||+..............+..+++|....+++..++..+.
T Consensus 263 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 325 (362)
T 2bdw_A 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMI 325 (362)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997533222223345567788889888888877765553
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-56 Score=449.60 Aligned_cols=323 Identities=36% Similarity=0.655 Sum_probs=273.4
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|.+.+.||+|+||+||+|.+..+|+.||+|++..... .....+.+.+|+.+++++. ||||+++++++.+++.
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLK-HPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCC-BTTBCCEEEEEECSSE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CcCCCeEEEEEEECCE
Confidence 3456789999999999999999999999999999999976543 3344577899999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.|+|||||.||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++....++.+||+|||++....
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999866567889999999998765
Q ss_pred CCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+..+...++.+.|+.+++++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 244 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 432 3355789999999999875 58999999999999999999999999999999999999999988888889999999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHh--hhh--hHHHHhhHH
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA--ENL--SEEEIMGLK 376 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~--~~~~~~~~~ 376 (480)
.+||.+||+.||.+|||+.++|+||||+..............+..+++|...++++..+...+. .++ ..+++....
T Consensus 245 ~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~~~~~~~~~~~e~~~~~ 324 (444)
T 3soa_A 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVT 324 (444)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEECCCCSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHH
Confidence 9999999999999999999999999997543222233345678889999999999988877663 333 233344444
Q ss_pred HhhcccCCCCC
Q 011647 377 EMFKSMDTDNS 387 (480)
Q Consensus 377 ~~F~~~D~~~~ 387 (480)
+.|.....++|
T Consensus 325 ~~~l~~i~~gD 335 (444)
T 3soa_A 325 EQLIEAISNGD 335 (444)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHhhhhcCC
Confidence 44443333333
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=428.77 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=211.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|++++.||+|+||+||+|.+..+ ++.||||.+.... .....+.+.+|+++|.++.+|||||+++++|.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 3467899999999999999999998654 3679999986532 33456779999999999986799999999986
Q ss_pred e-CCeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 139 D-RHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 139 ~-~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
+ ++.++||||||++|+|.++|... ..+++..+..++.||+.||.|||+++||||||||+|||+
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl 218 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 218 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence 5 45789999999999999999753 348999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCCh-H
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETE-Q 275 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~-~ 275 (480)
+.++.+||+|||+|+....... ....+||+.|||||++. +.|+.++|||||||+||||+| |..||.+... .
T Consensus 219 ---~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~ 295 (353)
T 4ase_A 219 ---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295 (353)
T ss_dssp ---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred ---CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH
Confidence 4567899999999987654332 23457999999999886 459999999999999999998 9999988654 4
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+...+..+.. .+ ..+.+++++.++|.+||+.||++|||+.++++|
T Consensus 296 ~~~~~i~~g~~-~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 296 EFCRRLKEGTR-MR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHHHTCC-CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCC-CC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 44455544432 22 224689999999999999999999999999987
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-54 Score=420.93 Aligned_cols=295 Identities=39% Similarity=0.692 Sum_probs=238.1
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
...+.++|.+.+.||+|+||+||+|.+..+++.||||++.... ..+.+.+|+.+++++. ||||+++++++.+.+
T Consensus 48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 121 (349)
T 2w4o_A 48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPT 121 (349)
T ss_dssp CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCC-CTTBCCEEEEEECSS
T ss_pred cccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCC-CCCCcceeeeEecCC
Confidence 4556788999999999999999999999999999999986532 2356889999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++...
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 99999999999999999988888999999999999999999999999999999999999976556788999999999876
Q ss_pred CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
..........||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+......++.+.++.++.+
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 281 (349)
T 2w4o_A 202 EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN 281 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHH
T ss_pred CcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHH
Confidence 55544556789999999999875 5899999999999999999999999776544 466777777776666667889999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHh
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 364 (480)
+.+||.+||..||++|||+.++|+||||+....... .......++++|....++++.....+.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFV--HMDTAQKKLQEFNARRKLKAAVKAVVA 344 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCS--CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCcccCCCccchh--hhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986543322 234566778888888888877765554
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-54 Score=430.03 Aligned_cols=262 Identities=33% Similarity=0.647 Sum_probs=219.2
Q ss_pred ccccceeec-ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe---
Q 011647 64 DVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (480)
Q Consensus 64 ~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--- 139 (480)
.+.+.|.+. +.||+|+||+||+|.++.+++.||||++... ..+.+|+.++.++.+||||+++++++..
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~ 129 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA 129 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence 345667776 7899999999999999999999999998532 4677899988777679999999999875
Q ss_pred -CCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 140 -RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 140 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...+|+|||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||
T Consensus 130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 667999999999999999998754 59999999999999999999999999999999999999765557889999999
Q ss_pred cceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHcCCCcCCCC
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAILRGHIDFSSD 291 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~~~~~~~~~~~~ 291 (480)
+++...........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... .....+..+...++..
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence 9997765555567789999999999864 5899999999999999999999999775532 2455667777777777
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 292 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
.|..+++++.+||.+||+.||++|||+.++|+||||......
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~ 331 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCC
Confidence 778899999999999999999999999999999999865443
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-54 Score=424.00 Aligned_cols=266 Identities=38% Similarity=0.642 Sum_probs=239.5
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---hcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..+.+.|.+++.||+|+||+||+|.++.+|+.||+|++.+...... ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEe
Confidence 4566789999999999999999999999999999999976543221 24578999999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC-CCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~~~ikl~Dfg~a 218 (480)
...+++||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999999988889999999999999999999999999999999999999964321 237999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...++.++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 246 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence 98776656667789999999999875 58999999999999999999999999999999999999888877766677899
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
+++++||.+||..||.+|||+.++|+||||+.
T Consensus 247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 278 (361)
T 2yab_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (361)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence 99999999999999999999999999999974
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-53 Score=415.32 Aligned_cols=258 Identities=35% Similarity=0.636 Sum_probs=234.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||+||+|.+..+|+.||||++..... +....+.+.+|+.+++.++ ||||+++++++...+.+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEE
Confidence 34679999999999999999999999999999999976433 4455678999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSS
T ss_pred EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCC
Confidence 999999999999999988999999999999999999999999999999999999999 45678999999999887766
Q ss_pred CccccCCCCcccccccccccc-C-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.+.......+..+....+. .+++++.+
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~ 243 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCEN 243 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHH
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHH
Confidence 666778999999999998654 3 57899999999999999999999999999998888887765543 57999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
||.+||..||.+|||++++|+||||+...
T Consensus 244 li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 99999999999999999999999998643
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-54 Score=420.21 Aligned_cols=257 Identities=28% Similarity=0.538 Sum_probs=227.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..++..+.+||||+++++++.+.+.+|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 36799999999999999999999999999999999765444445667889999999998679999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~ 224 (480)
|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCC
Confidence 99999999999999998999999999999999999999999999999999999999 556789999999998643 22
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++. .+++++.+|
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~l 254 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGI 254 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHH
Confidence 33456789999999999865 5899999999999999999999999999999999999888776553 589999999
Q ss_pred HHHhcccCcCCCCCH------HHHhcCCcccc
Q 011647 304 VKKMLHADPKERLSA------AEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~t~------~~~l~h~~~~~ 329 (480)
|.+||+.||.+||++ +++++||||+.
T Consensus 255 i~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp HHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred HHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence 999999999999999 89999999974
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-54 Score=422.23 Aligned_cols=299 Identities=34% Similarity=0.643 Sum_probs=242.0
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+.++|.+.+.||+|+||+||+|.++.+++.||||++...... .....+.+.+|+.+++.+. ||||+++++++.+.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 3557899999999999999999999999999999998653321 1224578999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 142 SVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+|+|||||+|++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++....+||+|||+
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999998877543 3589999999999999999999999999999999999997666667799999999
Q ss_pred ceecCCCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 218 SVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 218 a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
+........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+. .......+..+...++...++.
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCcccccc
Confidence 987654332 345689999999999865 5899999999999999999999999875 4556667777666655555678
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHh
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 364 (480)
+++++.+||.+||..||++|||+.++|+||||+..............++++++|....+++......+.
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 327 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVS 327 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC----------
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999997532211122224456777888777777766665554
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-53 Score=417.84 Aligned_cols=259 Identities=36% Similarity=0.559 Sum_probs=209.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|++..+++.||||++..... ..+.+.+|+.++++++ ||||+++++++.+.+.++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLR-HPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEE
Confidence 34689999999999999999999999999999999865432 2266889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. +..+.+||+|||+++.....
T Consensus 93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~-~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS-SSSCCEEECCCCCC------
T ss_pred EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCceEEEeecCcccccccc
Confidence 99999999999999988889999999999999999999999999999999999999953 22345999999999865444
Q ss_pred CccccCCCCccccccccccc-cCCC-chhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGA-EADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
......+||+.|+|||++.+ .+.. ++|||||||++|+|++|+.||.+... ......+......++. ...+++
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~ 249 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD--DIRISP 249 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT--TSCCCH
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC--cCCCCH
Confidence 44456689999999998864 3544 48999999999999999999987543 3444455554443332 346899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
++.+||.+||..||++|||+.++++||||....
T Consensus 250 ~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 250 ECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred HHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 999999999999999999999999999997543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-54 Score=416.17 Aligned_cols=262 Identities=31% Similarity=0.629 Sum_probs=237.1
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||+|++... ....+.+.+|+.+++.+. ||||+++++++.+.+.+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 76 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIAR-HRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCEE
Confidence 3567899999999999999999999999999999998643 234567899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++|||||+|++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.. .++.+||+|||++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECC
Confidence 99999999999999997654 69999999999999999999999999999999999999642 26789999999999887
Q ss_pred CCCccccCCCCcccccccccccc-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.........||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+......++...++.+|+++.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHH
Confidence 66666677899999999998764 78999999999999999999999999999999999998888777666778999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+||.+||..||.+|||+.++|+||||+...
T Consensus 236 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 236 DFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 999999999999999999999999998643
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-53 Score=411.85 Aligned_cols=255 Identities=32% Similarity=0.591 Sum_probs=230.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+++++. ||||+++++++.+.+.+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCEEEEE
Confidence 57999999999999999999999999999999997654434455678899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CCC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~~ 225 (480)
|||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 456789999999998643 333
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++. .+++++.+||
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li 236 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHH
Confidence 4456789999999999865 5899999999999999999999999999888888888877665543 6899999999
Q ss_pred HHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
.+||+.||.+|| ++.++++||||+.
T Consensus 237 ~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 999999999999 9999999999974
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-53 Score=409.47 Aligned_cols=267 Identities=39% Similarity=0.678 Sum_probs=237.0
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---hcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..+.++|.+.+.||+|+||+||+|.+..+++.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 4466789999999999999999999999999999999976543221 24678999999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-CCCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg~a 218 (480)
...+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999999998888899999999999999999999999999999999999996433 2337999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...++.++
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence 98765555566789999999999864 58999999999999999999999999999888888888777666655556889
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 246 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999999999999999999999999999999743
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-52 Score=416.32 Aligned_cols=257 Identities=28% Similarity=0.553 Sum_probs=224.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|..++.++.+||||+++++++.+.+.+|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 36799999999999999999999999999999999876555555567788999999988669999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec-CCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~-~~~ 224 (480)
|||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.. ...
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCC
Confidence 99999999999999988999999999999999999999999999999999999999 55778999999999863 334
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHcCCCcCCCCCCC
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE---------TEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||... ........+......++.
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---- 283 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 283 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT----
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC----
Confidence 45567789999999999875 5899999999999999999999999643 233455666666655543
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCH------HHHhcCCcccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSA------AEVLNHPWMRV 329 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~------~~~l~h~~~~~ 329 (480)
.+++++.+||.+||+.||.+||++ +++++||||+.
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 689999999999999999999985 89999999974
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-52 Score=399.35 Aligned_cols=268 Identities=40% Similarity=0.799 Sum_probs=243.0
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..++..||+|.+..... ...+.+.+|+.+++++. ||||+++++++.+.+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLD-HPNIIRLYETFEDNTDI 81 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCeE
Confidence 456789999999999999999999999999999999865432 34578999999999997 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++..++.++.+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999999999999999888999999999999999999999999999999999999997666778899999999988776
Q ss_pred CCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
........||+.|+|||++.+.++.++||||||+++|+|++|..||......+....+..+...++...+..+++.+.++
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (277)
T 3f3z_A 162 GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESL 241 (277)
T ss_dssp TSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHH
T ss_pred ccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHH
Confidence 66666778999999999998889999999999999999999999999999988888888887776665566789999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
|.+||+.||.+|||+.++|+||||+.....+.
T Consensus 242 i~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~ 273 (277)
T 3f3z_A 242 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273 (277)
T ss_dssp HHHHTCSSTTTSCCHHHHTTSHHHHHHHCCSG
T ss_pred HHHHccCChhhCcCHHHHhcCHHHhccccccc
Confidence 99999999999999999999999986544443
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-52 Score=395.97 Aligned_cols=267 Identities=38% Similarity=0.749 Sum_probs=243.5
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.+.+..
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCEE
Confidence 456789999999999999999999999999999999875443 4455678899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+.+++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||+++.++....+||+|||++.....
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999999999999999888999999999999999999999999999999999999998766667799999999988766
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+..+...++...+..+++++.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence 655566789999999999865 4899999999999999999999999999999999999888888887777889999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
||.+||+.||++|||+.++|+||||+....
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred HHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 999999999999999999999999986544
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-52 Score=410.31 Aligned_cols=257 Identities=28% Similarity=0.506 Sum_probs=229.8
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..++..+.+||||+++++++.+.+.+|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 46799999999999999999999999999999999765433344567788999999988559999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-C
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-G 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~ 224 (480)
||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.... .
T Consensus 96 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCC
Confidence 99999999999999988899999999999999999999999999999999999999 4567899999999986432 2
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++ ..+++++.+|
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 248 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDL 248 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHHH
Confidence 33456789999999999865 589999999999999999999999999999888888887765544 3589999999
Q ss_pred HHHhcccCcCCCCCHH-HHhcCCcccc
Q 011647 304 VKKMLHADPKERLSAA-EVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~-~~l~h~~~~~ 329 (480)
|.+||..||++||++. ++++||||+.
T Consensus 249 i~~lL~~dp~~R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 249 LVKLFVREPEKRLGVRGDIRQHPLFRE 275 (345)
T ss_dssp HHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred HHHHhcCCHhHcCCChHHHHcCccccC
Confidence 9999999999999998 9999999974
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-52 Score=405.63 Aligned_cols=257 Identities=28% Similarity=0.550 Sum_probs=226.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++.++.+||||+++++++.+.+.+|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 36799999999999999999999999999999999876665666678899999999998569999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~ 224 (480)
||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCC
Confidence 99999999999999988899999999999999999999999999999999999999 456789999999998632 33
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCC---------CChHHHHHHHHcCCCcCCCCCCC
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWG---------ETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~---------~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .........+......++ .
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~ 240 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----R 240 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----T
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----C
Confidence 34556789999999999865 589999999999999999999999975 233445566666655544 3
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCH------HHHhcCCcccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSA------AEVLNHPWMRV 329 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~------~~~l~h~~~~~ 329 (480)
.+++++.+||.+||+.||.+||++ .++++||||+.
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 689999999999999999999995 89999999974
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-52 Score=402.69 Aligned_cols=254 Identities=29% Similarity=0.595 Sum_probs=229.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|+++.+|+.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCEEEE
Confidence 367999999999999999999999999999999997654333445678899999999997 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 84 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS--
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCC--
Confidence 99999999999999998899999999999999999999999999999999999999 4577899999999987543
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++ +.+++++.++|
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 234 (318)
T 1fot_A 159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLL 234 (318)
T ss_dssp CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence 2345689999999999865 589999999999999999999999999998888888888766554 36899999999
Q ss_pred HHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
.+||..||.+|| +++++++||||+.
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred HHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 999999999999 9999999999974
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-52 Score=409.81 Aligned_cols=257 Identities=27% Similarity=0.514 Sum_probs=230.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..++..+.+||||+++++++.+.+.+|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 46799999999999999999999999999999999765443445567889999999988669999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~ 224 (480)
||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCC
Confidence 99999999999999988899999999999999999999999999999999999999 456789999999998643 23
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++ ..+++++.+|
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 251 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAI 251 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 34456789999999999864 589999999999999999999999999999999999888776654 3689999999
Q ss_pred HHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 304 VKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
|.+||+.||.+||+ ++++++||||+.
T Consensus 252 i~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 252 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp HHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 99999999999994 699999999974
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-52 Score=411.82 Aligned_cols=256 Identities=28% Similarity=0.569 Sum_probs=218.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHH-HHccCCCCeeEEEEEEEeCCeEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM-HHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
.++|.+++.||+|+||+||+|+++.+++.||||++.+...........+.+|..++ +.+. ||||+++++++.+.+.+|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC-CTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCEEE
Confidence 46799999999999999999999999999999999876655555556677787764 4555 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-C
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-P 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~ 223 (480)
+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... .
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccC
Confidence 999999999999999988899999999999999999999999999999999999999 457789999999998643 3
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++ +.+++++++
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ 268 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARH 268 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHHHH
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHHHH
Confidence 334456789999999999865 589999999999999999999999999999888888888765543 468999999
Q ss_pred HHHHhcccCcCCCCCH----HHHhcCCcccc
Q 011647 303 IVKKMLHADPKERLSA----AEVLNHPWMRV 329 (480)
Q Consensus 303 li~~~L~~dp~~R~t~----~~~l~h~~~~~ 329 (480)
||.+||+.||.+||++ .++++||||+.
T Consensus 269 li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp HHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred HHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 9999999999999987 69999999974
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=409.75 Aligned_cols=261 Identities=38% Similarity=0.665 Sum_probs=230.2
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|.+.+.||+|+||+||+|.++.+++.||||++.+... ...+|++++.++.+||||+++++++.+++.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 90 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKY 90 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence 3466789999999999999999999999999999999975432 235688888888669999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-CCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg~a~~~ 221 (480)
+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ..+.+||+|||++...
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999999999988999999999999999999999999999999999999985432 2346999999999876
Q ss_pred CCC-CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPG-DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ ....++...+..+...++...|+.+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 250 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence 543 33455689999999999875 488999999999999999999999986 4567788888888888877778899
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
++++.+||.+||..||++|||+.++|+||||...
T Consensus 251 s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999999999999999999999999999654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=393.83 Aligned_cols=262 Identities=36% Similarity=0.689 Sum_probs=225.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..++..||+|++.... .....+.+.+|+++++++. ||||+++++++.+....
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 95 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNM 95 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCC-CchHHhHHHheecCCeE
Confidence 35578999999999999999999999999999999987543 2334678999999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 144 NLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
++||||+++++|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+||++...+.++.+||+|||++.
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999999998854 3679999999999999999999999999999999999999765667889999999998
Q ss_pred ecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
............||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+......+... ...++++
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 254 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQ 254 (285)
T ss_dssp C----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCCHH
T ss_pred ecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCCHH
Confidence 766555556678999999999998889999999999999999999999999988887777766655444332 2357899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
+.+||.+||+.||++|||+.|+|+||||+.
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 999999999999999999999999999984
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=410.30 Aligned_cols=264 Identities=35% Similarity=0.631 Sum_probs=236.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.++.+++.||+|++.... ......+.+|+.+++++. ||||+++++++.+...+
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~ 123 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEM 123 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCEE
Confidence 35578999999999999999999999999999999986432 234467899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++|||||.|++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++. +..+.+||+|||++....
T Consensus 124 ~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEecccceecC
Confidence 99999999999999887654 6999999999999999999999999999999999999964 234679999999999876
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++...+..+++++.
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 282 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHH
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence 6555566789999999999865 488999999999999999999999999998888888888887777777788999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+||.+||+.||++|||+.++|+||||+....
T Consensus 283 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 283 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999999999999999999999999986543
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-51 Score=409.32 Aligned_cols=257 Identities=28% Similarity=0.536 Sum_probs=228.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.+++.+. |||||++++++.+.+.+|
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 91 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMF 91 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEE
Confidence 3478999999999999999999999999999999997655444556788999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCC
Confidence 999999999999999988899999999999999999999999999999999999999 56778999999999987766
Q ss_pred CccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 DVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
......+||+.|+|||++.. .++.++|||||||++|+|++|..||.... .......+......++ ..++
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s 244 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWS 244 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSC
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCC
Confidence 66677899999999999852 47899999999999999999999997533 4455555555554443 3689
Q ss_pred HHHHHHHHHhcccCcCCCCC-HHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERLS-AAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t-~~~~l~h~~~~~ 329 (480)
+++.+||.+||+.||.+||+ ++++++||||+.
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence 99999999999999999998 999999999974
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=393.94 Aligned_cols=260 Identities=28% Similarity=0.487 Sum_probs=224.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...++|.+.+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+.+++++. ||||+++++++..++.+
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 92 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 92 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCC-CCCCCeEeEEEEECCEE
Confidence 355789999999999999999999999999999999865432 33577899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||++|++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 93 WVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceecCC
Confidence 9999999999999988754 69999999999999999999999999999999999999 4567799999999987654
Q ss_pred CC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+....... ......+++.+.
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIFR 247 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHHHH
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHHHH
Confidence 33 3345689999999998864 58999999999999999999999999888766665554433221 112346899999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+||.+||+.||++|||+.++|+||||+....
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 9999999999999999999999999997644
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-52 Score=406.07 Aligned_cols=255 Identities=29% Similarity=0.591 Sum_probs=230.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEE
Confidence 3478999999999999999999999999999999997654444455678999999999997 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccCC
Confidence 999999999999999988899999999999999999999999999999999999999 45678999999999876432
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++ ..+++++.+|
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 268 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDL 268 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHH
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence 345689999999998864 589999999999999999999999999999889888888776554 3689999999
Q ss_pred HHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 304 VKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
|.+||+.||.+||+ ++++++||||+.
T Consensus 269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred HHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 99999999999998 999999999974
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-53 Score=411.14 Aligned_cols=257 Identities=34% Similarity=0.619 Sum_probs=222.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..+++.||||++.............+.+|+.+++.++ ||||+++++++.+.+.++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEE
Confidence 3467999999999999999999999999999999987543333334467899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+ +|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTS
T ss_pred EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCC
Confidence 999999 78999999988999999999999999999999999999999999999999 45678999999999887666
Q ss_pred CccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......+||+.|+|||++.+. .+.++|||||||++|+|++|..||.+.........+......+ ...+|+++.+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~ 237 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDFLSPGAQS 237 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC----CTTSCHHHHH
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC----cccCCHHHHH
Confidence 666677899999999998754 3789999999999999999999998765544333332222222 2458999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
||.+||..||.+|||++|+++||||+..
T Consensus 238 li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 9999999999999999999999999864
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-52 Score=416.92 Aligned_cols=261 Identities=30% Similarity=0.503 Sum_probs=228.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 145 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLY 145 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEE
Confidence 3468999999999999999999999999999999997543323333456889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 146 lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 146 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccC
Confidence 99999999999998865 579999999999999999999999999999999999999 56778999999999876544
Q ss_pred Cc--cccCCCCcccccccccccc-----CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 DV--FKDLVGSAYYVAPEVLRRN-----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+.......+......+..+.+..+|
T Consensus 222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 301 (410)
T 3v8s_A 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 301 (410)
T ss_dssp SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCC
T ss_pred CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCccccc
Confidence 32 2367899999999988532 6789999999999999999999999999988888887765444444456799
Q ss_pred HHHHHHHHHhcccCcCC--CCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~~ 330 (480)
+++++||.+||+.+|.+ |++++++++||||+..
T Consensus 302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 99999999999999988 9999999999999854
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=400.53 Aligned_cols=267 Identities=36% Similarity=0.668 Sum_probs=213.5
Q ss_pred cceeec---ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFG---RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~---~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+|.+. +.||+|+||+||+|.++.+++.||||++... ....+.+|+.+++.+.+||||+++++++.+....
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 456664 7899999999999999999999999998643 3467889999999998899999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++..+....+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp EEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999999999999999999999999999999999999999999999999999999997655555899999999987543
Q ss_pred C-CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHcCCCcCCCCCCC
Q 011647 224 G-DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-------EQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~ 294 (480)
. ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ..+....+..+...++...+.
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence 3 23345678999999999865 58999999999999999999999997643 356677777777766666666
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~ 339 (480)
.+++++.+||.+||+.||.+|||+.++++||||+.....+..++.
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~~~ 286 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLM 286 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSCCS
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCCCC
Confidence 799999999999999999999999999999999977665555543
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=408.71 Aligned_cols=258 Identities=34% Similarity=0.618 Sum_probs=225.3
Q ss_pred cceee--cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 67 NTYIF--GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 67 ~~y~~--~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..|.+ .+.||+|+||+||+|.+..+|+.||+|++.... ....+.+.+|+.+++++. ||||+++++++.+.+.++
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 162 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIV 162 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEE
Confidence 44555 678999999999999999999999999986542 244578999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+.. +.++.+||+|||++.....
T Consensus 163 lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp EEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCEECCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCceecCC
Confidence 999999999999988754 46999999999999999999999999999999999999953 2356799999999998776
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+......++...++.+++++.+
T Consensus 242 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 321 (373)
T 2x4f_A 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKE 321 (373)
T ss_dssp TCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHH
T ss_pred ccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHH
Confidence 665566789999999998864 5889999999999999999999999999998888888888777776667789999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
||.+||+.||.+|||+.++|+||||+.
T Consensus 322 li~~~L~~dp~~Rps~~e~l~hp~~~~ 348 (373)
T 2x4f_A 322 FISKLLIKEKSWRISASEALKHPWLSD 348 (373)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred HHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence 999999999999999999999999974
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-51 Score=399.83 Aligned_cols=275 Identities=30% Similarity=0.545 Sum_probs=238.5
Q ss_pred ccCCcccccccceeec-ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEE
Q 011647 57 VLGKPMEDVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (480)
Q Consensus 57 ~~~~~~~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~ 135 (480)
......+.+.++|.+. +.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.++.++.+||||+++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3445567788889998 899999999999999999999999999876432 33456789999999999987899999999
Q ss_pred EEEeCCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 136 AYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
++.+.+.+++||||+.+++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEe
Confidence 999999999999999999999988543 679999999999999999999999999999999999999754446789999
Q ss_pred ecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......++...
T Consensus 177 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 256 (327)
T 3lm5_A 177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256 (327)
T ss_dssp CGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred eCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchh
Confidence 9999998765555566789999999999864 589999999999999999999999999998888888888877777777
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+..+++.+.+||.+||+.||++|||++++|+||||+....
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296 (327)
T ss_dssp TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence 7889999999999999999999999999999999986533
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-52 Score=398.27 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=190.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC----
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~---- 141 (480)
..+|.+.+.||+|+||+||+|++ +|+.||||++.... ......++|+..+.+++ |||||++++++.+++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCC-CCCCCcEEEEEEecCCCce
Confidence 35689999999999999999988 47899999986432 11122345666667787 999999999997654
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeecCCCCcceecccCCCCCCeeEe
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------GVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
.+|||||||++|+|.+++.. ..++++.+..++.|++.||.|||++ +||||||||+|||+ +.++++||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEE
Confidence 58999999999999999865 4699999999999999999999987 99999999999999 567789999
Q ss_pred ecccceecCCCCc-----cccCCCCcccccccccccc-------CCCchhHHHHHHHHHHHHhCCCCCCCC---------
Q 011647 214 DFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSGVPPFWGE--------- 272 (480)
Q Consensus 214 Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~~lltg~~pf~~~--------- 272 (480)
|||+|+....... ....+||+.|||||++.+. ++.++|||||||+||||+||.+||...
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 9999987654332 2345899999999998642 567899999999999999997765321
Q ss_pred ------ChHHHHHHHHcCCCcCCCCC-C--CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 273 ------TEQSIFDAILRGHIDFSSDP-W--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 273 ------~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
........+.........+. + ...+..+.+|+.+||+.||++|||+.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 12233333333332211111 0 112357889999999999999999999975
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-52 Score=416.05 Aligned_cols=261 Identities=26% Similarity=0.498 Sum_probs=226.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..+. ||||+++++++.+.+.+|
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCEEE
Confidence 4578999999999999999999999999999999997543322333345889999999997 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+|||||+||+|.+++.. .+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++....
T Consensus 151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhccc
Confidence 99999999999999987 5789999999999999999999999999999999999999 5677899999999987654
Q ss_pred CCc--cccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC-CCC
Q 011647 224 GDV--FKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD-PWP 294 (480)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~ 294 (480)
... ....+||+.|+|||++. +.++.++|||||||++|||++|..||.+.+..+....+......+..+ .+.
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 307 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT 307 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence 332 23468999999999885 348999999999999999999999999999888888886543222222 235
Q ss_pred CCCHHHHHHHHHhcccCcCC--CCCHHHHhcCCcccc
Q 011647 295 NISSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~--R~t~~~~l~h~~~~~ 329 (480)
.+++++++||.+||..+|++ |++++++++||||+.
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~ 344 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence 68999999999999998888 999999999999974
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-51 Score=396.96 Aligned_cols=266 Identities=38% Similarity=0.648 Sum_probs=234.8
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---hcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..+.++|.+.+.||+|+||.||+|.+..+++.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYEN 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEec
Confidence 3456789999999999999999999999999999999976443221 23678999999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC-CCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~~~ikl~Dfg~a 218 (480)
.+.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999999998888999999999999999999999999999999999999964321 127999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+......++...+..++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccC
Confidence 98766555566789999999999864 58999999999999999999999999999888888888776655544446789
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
+.+.+||.+||..||++|||+.++|+||||+.
T Consensus 247 ~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~ 278 (321)
T 2a2a_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (321)
T ss_dssp HHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence 99999999999999999999999999999974
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=417.44 Aligned_cols=257 Identities=31% Similarity=0.580 Sum_probs=219.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..+++.||||++.............+.+|+.+++++. ||||+++++++.+.+.++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~ 224 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLC 224 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEE
Confidence 3467999999999999999999999999999999997654444555677889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecC-
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK- 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~- 222 (480)
+||||++|++|.+++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+++...
T Consensus 225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCTTCC
T ss_pred EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCceeccC
Confidence 999999999999999988899999999999999999999998 999999999999999 456789999999998643
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++. .+++++.
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~ 377 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAK 377 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHH
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHH
Confidence 2334456789999999999864 5899999999999999999999999999998888888877665543 6899999
Q ss_pred HHHHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+||.+||+.||.+|| +++++++||||+.
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 999999999999999 9999999999974
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-51 Score=417.28 Aligned_cols=258 Identities=35% Similarity=0.622 Sum_probs=232.3
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+++.||+|+||+||+|.+..+|+.||||++...........+.+.+|+.+++.+. ||||+++++++...+.++
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 4578999999999999999999999999999999997654333345678999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhcccc
Confidence 999999999999999888899999999999999999999999999999999999999 45677999999999987666
Q ss_pred CccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......+||+.|+|||++.+. .+.++|||||||++|+|++|..||.+.........+..+....+ ..+++++.+
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 245 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVIS 245 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHHH
Confidence 666677899999999998764 47899999999999999999999999888888888887765433 358899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
||.+||+.||.+|||+.++++||||+..
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 9999999999999999999999999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-51 Score=394.87 Aligned_cols=264 Identities=36% Similarity=0.629 Sum_probs=221.4
Q ss_pred cccceeec-ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 65 VRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 65 ~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
+.++|.+. +.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+.++.++.+||||+++++++.+.+.+
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 45679985 78999999999999999999999999986542 234578899999999976699999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++....+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999999999888999999999999999999999999999999999999997655555699999999876532
Q ss_pred CC--------ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCC---------------h
Q 011647 224 GD--------VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGET---------------E 274 (480)
Q Consensus 224 ~~--------~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~---------------~ 274 (480)
.. .....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.. .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 11 122456999999999885 347899999999999999999999997754 2
Q ss_pred HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
......+..+...++...+..+++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 345666777666665544567899999999999999999999999999999998543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-51 Score=404.90 Aligned_cols=262 Identities=35% Similarity=0.696 Sum_probs=233.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-C----hhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-N----RDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~----~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||++...... . ....+.+.+|+.+++++.+||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 3457899999999999999999999999999999998654311 1 1124668899999999955999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..+..++||||++|++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFS 247 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCcc
Confidence 999999999999999999999988899999999999999999999999999999999999999 45678999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 291 (480)
.............||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...++.+
T Consensus 248 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 327 (365)
T 2y7j_A 248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327 (365)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHH
T ss_pred cccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence 98776666667789999999998752 37889999999999999999999999988888888888877766655
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 292 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.+..+++.+.+||.+||+.||++|||+.++|+||||+
T Consensus 328 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 5678899999999999999999999999999999997
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-51 Score=410.00 Aligned_cols=261 Identities=26% Similarity=0.481 Sum_probs=224.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+.++..+. ||||+++++++.+.+.+|
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~ 137 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLHFAFQDENYLY 137 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCEEE
Confidence 4578999999999999999999999999999999997543333334456889999999997 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||++||+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||+ +.++++||+|||+++....
T Consensus 138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccC
Confidence 9999999999999998754 79999999999999999999999999999999999999 5577899999999987654
Q ss_pred CCc--cccCCCCcccccccccc--------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC-C
Q 011647 224 GDV--FKDLVGSAYYVAPEVLR--------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD-P 292 (480)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~ 292 (480)
... ....+||+.|+|||++. +.++.++|||||||++|||++|+.||.+.+..+....+......+..+ .
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 294 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV 294 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence 432 23468999999999885 348899999999999999999999999999888888876543222221 1
Q ss_pred CCCCCHHHHHHHHHhcccCcCCC---CCHHHHhcCCccccc
Q 011647 293 WPNISSSAKDIVKKMLHADPKER---LSAAEVLNHPWMRVD 330 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R---~t~~~~l~h~~~~~~ 330 (480)
...+|+++++||.+||. +|.+| ++++++++||||+.-
T Consensus 295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 24689999999999999 99998 599999999999753
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=387.14 Aligned_cols=258 Identities=26% Similarity=0.492 Sum_probs=215.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++.+.||+|+||+||+|.+..+++.||||++..... .......+.+|+.+++++. ||||+++++++.+++.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEE
Confidence 479999999999999999999999999999999975442 3344577889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+.+ +|.+.+.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSCC
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCcc
Confidence 999976 55555544 6789999999999999999999999999999999999999 45677999999999876432
Q ss_pred CccccCCCCccccccccccc-c-CCCchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHcCCCcCCC-----------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-N-YGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILRGHIDFSS----------- 290 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~lltg~~p-f~~~~~~~~~~~~~~~~~~~~~----------- 290 (480)
.......||+.|+|||++.+ . ++.++|||||||++|+|++|..| |.+.........+.........
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 23445689999999998864 3 79999999999999999988777 4555555555555432111111
Q ss_pred --------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 291 --------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 291 --------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
...+.+++++++||.+||+.||++|||++|+|+||||+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 1123578999999999999999999999999999999853
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=390.43 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=216.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--ChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEEe
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLT--GHRNIVELKGAYED 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~ 139 (480)
...++|++.+.||+|+||+||+|++..+++.||||++...... .......+.+|+.+++++. .||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467899999999999999999999999999999998643321 1112345677887777665 49999999999987
Q ss_pred CC-----eEEEEEecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 140 RH-----SVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 140 ~~-----~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
.. .+++||||+. ++|.+++..... +++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEE
Confidence 65 5899999996 599999987654 9999999999999999999999999999999999999 45678999
Q ss_pred eecccceecCCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC
Q 011647 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291 (480)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 291 (480)
+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+.......+..
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 9999998776555566778999999999885 458999999999999999999999999988887777665432211111
Q ss_pred C-----------------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 292 P-----------------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 292 ~-----------------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
. .+.+++++.+||.+||+.||++|||+.++|+||||+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence 1 24678999999999999999999999999999999864
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=388.42 Aligned_cols=264 Identities=41% Similarity=0.745 Sum_probs=234.1
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||+|++..... ...+.+.+|+.+++++. ||||+++++++.+.+.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIK-HENIVTLEDIYESTTHY 81 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCC-CCCeeehhhhcccCCEE
Confidence 456789999999999999999999999999999999875432 23367889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+.++.+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999999999998888999999999999999999999999999999999999996556678899999999976443
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+...++...++.+++++.+
T Consensus 162 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 240 (304)
T 2jam_A 162 G-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240 (304)
T ss_dssp B-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHH
T ss_pred C-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHH
Confidence 2 2344579999999999865 4889999999999999999999999999988888888888877777667789999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+|.+||..||++|||+.++|+||||+....
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 241 FICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 999999999999999999999999986543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=393.59 Aligned_cols=257 Identities=32% Similarity=0.574 Sum_probs=216.1
Q ss_pred cccceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccC-ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
..++|.+.+.||+|+||+||+|++. .+++.||+|++.+.... .......+.+|+.+++++. ||||+++++++...
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 93 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTG 93 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcC
Confidence 3468999999999999999999985 67899999999765332 2234466889999999998 99999999999999
Q ss_pred CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+.+|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCSCC--
T ss_pred CEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCCcccc
Confidence 9999999999999999999988899999999999999999999999999999999999999 4567899999999876
Q ss_pred cCC-CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 221 FKP-GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 221 ~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ +.+++
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~ 246 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQ 246 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTSCH
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCH
Confidence 432 223345689999999998864 589999999999999999999999999988888888887765544 36899
Q ss_pred HHHHHHHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 299 SAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
++.+||.+||..||.+|| ++.++++||||+.
T Consensus 247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 999999999999999999 8999999999974
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-51 Score=388.42 Aligned_cols=266 Identities=41% Similarity=0.736 Sum_probs=239.9
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|++.+.||+|+||+||+|.+..+++.||||++..... .....+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCe
Confidence 3456789999999999999999999999999999999865433 3345678999999999997 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.++||||+++++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+||+++..+.+..+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999999999888899999999999999999999999999999999999999776666789999999998765
Q ss_pred CCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.........||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+..+...++.+.+..+++++.+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (287)
T ss_dssp CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHH
T ss_pred CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHH
Confidence 55444555789999999999888999999999999999999999999999988888888888777666666789999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+|.+||..||++|||+.++|+||||+..
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 9999999999999999999999999864
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=393.90 Aligned_cols=263 Identities=32% Similarity=0.524 Sum_probs=233.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
...+|.+++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+.++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 4578999999999999999999999999999999997765555566788999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceecccC
Confidence 999999999999999888899999999999999999999999999999999999999 45677999999999876432
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+......++ ..+++.+.+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 270 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS 270 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHHH
Confidence 33445679999999999865 488899999999999999999999998888777777776655443 367899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
||.+||+.||++|||+.++|+||||+....+..
T Consensus 271 li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~ 303 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 303 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSC
T ss_pred HHHHHccCChhHCcCHHHHhcCccccCCCcccc
Confidence 999999999999999999999999987655443
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=390.68 Aligned_cols=261 Identities=27% Similarity=0.446 Sum_probs=214.7
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+.+.++|++.+.||+|+||+||+|.+.. ++.||+|++..... .......+.+|+.+++++. ||||+++++++.++..
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~ 93 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAE-DEGIPSTAIREISLLKELH-HPNIVSLIDVIHSERC 93 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC-------CHHHHHHHHHHHHHHCC-CTTBCCEEEEECCSSC
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccc-cchhhHHHHHHHHHHHHcC-CCCEeeeeeEEccCCE
Confidence 4566889999999999999999999964 89999999865432 3334577889999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+++||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF 169 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEET
T ss_pred EEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCcCceec
Confidence 9999999975 888877764 459999999999999999999999999999999999999 45677999999999876
Q ss_pred CCC-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC-------
Q 011647 222 KPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD------- 291 (480)
Q Consensus 222 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~------- 291 (480)
... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+..........
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp TSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred CCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence 432 33445689999999998854 48999999999999999999999998877666555543311111100
Q ss_pred -------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 292 -------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 292 -------------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+.+++++.+||.+||+.||++|||+.|+|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 307 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence 123578899999999999999999999999999999853
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-51 Score=396.32 Aligned_cols=263 Identities=30% Similarity=0.480 Sum_probs=213.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..+++.||||++..... .....+.+.+|+.+++++. ||||+++++++.+++.++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCC-CTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcC-CCCcceEEEEEecCCEEE
Confidence 34689999999999999999999999999999999865432 2333466789999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+.+ +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++ ..+.+||+|||++....
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 99999975 9999999988999999999999999999999999999999999999996432 34569999999998754
Q ss_pred CC-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCC-----
Q 011647 223 PG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----- 294 (480)
Q Consensus 223 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (480)
.. .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+...........++
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 32 23345678999999999864 47999999999999999999999999988877766665422111111111
Q ss_pred ---------------------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 295 ---------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 295 ---------------------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+++++.+||.+||+.||++|||+.|+|+||||+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 167899999999999999999999999999999854
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-51 Score=414.26 Aligned_cols=263 Identities=25% Similarity=0.419 Sum_probs=200.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~---- 139 (480)
.+.++|.+++.||+|+||+||+|.++.+++.||||++... .......+.+.+|+.+|+++. ||||+++++++..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 127 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVE 127 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCC-CCCCCceEEEEecCCcc
Confidence 3457899999999999999999999999999999998643 334455678999999999998 9999999999843
Q ss_pred -CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 140 -RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 140 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
...+|+||||+ +++|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||++
T Consensus 128 ~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla 203 (458)
T 3rp9_A 128 KFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLA 203 (458)
T ss_dssp TCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccc
Confidence 35799999998 57999999888889999999999999999999999999999999999999 45678999999999
Q ss_pred eecCCCC----------------------------ccccCCCCccccccccc-c-ccCCCchhHHHHHHHHHHHHh----
Q 011647 219 VFFKPGD----------------------------VFKDLVGSAYYVAPEVL-R-RNYGAEADIWSAGVILYILLS---- 264 (480)
Q Consensus 219 ~~~~~~~----------------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~llt---- 264 (480)
+...... .....+||+.|+|||++ . ..++.++|||||||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 8754211 23456889999999976 3 458999999999999999998
Q ss_pred -------CCCCCCCCCh--------------------HHHHHHHHc-----------------------CCCc----CCC
Q 011647 265 -------GVPPFWGETE--------------------QSIFDAILR-----------------------GHID----FSS 290 (480)
Q Consensus 265 -------g~~pf~~~~~--------------------~~~~~~~~~-----------------------~~~~----~~~ 290 (480)
|.++|.+... ...+..+.. .... ...
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 6777765431 111111111 0000 001
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
..++.+++++.+||.+||..||++|||++|+|+||||+....
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 124567999999999999999999999999999999986533
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-51 Score=405.66 Aligned_cols=265 Identities=31% Similarity=0.513 Sum_probs=212.3
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
...+.++|.+.+.||+|+||+||+|.+..+++.||||++... .........+.+|+.+++++.+||||+++++++...+
T Consensus 4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~ 82 (388)
T 3oz6_A 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82 (388)
T ss_dssp CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence 345667899999999999999999999999999999998643 3344556788899999999988999999999997544
Q ss_pred --eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 142 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
.+|+|||||. ++|.+++.. +.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSR 157 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred CCEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCcccc
Confidence 7899999996 589888765 579999999999999999999999999999999999999 456789999999998
Q ss_pred ecCC----------------------CCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 011647 220 FFKP----------------------GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (480)
Q Consensus 220 ~~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 275 (480)
.... .......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 6532 112344689999999998864 5899999999999999999999999998887
Q ss_pred HHHHHHHcCCCcCC-------------------------------------------CCCCCCCCHHHHHHHHHhcccCc
Q 011647 276 SIFDAILRGHIDFS-------------------------------------------SDPWPNISSSAKDIVKKMLHADP 312 (480)
Q Consensus 276 ~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~li~~~L~~dp 312 (480)
..+..+........ ..+...+++++.+||.+||+.||
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 77666542111000 00123678999999999999999
Q ss_pred CCCCCHHHHhcCCcccccCC
Q 011647 313 KERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 313 ~~R~t~~~~l~h~~~~~~~~ 332 (480)
++|||++|+|+||||+....
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~~ 337 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFHN 337 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTCC
T ss_pred ccCCCHHHHhCCHHHHHhcC
Confidence 99999999999999976543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=388.43 Aligned_cols=256 Identities=31% Similarity=0.608 Sum_probs=216.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC-----------------------hhcHHHHHHHHHHHH
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----------------------RDDVEDVRREVQIMH 122 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~ 122 (480)
.++|.+.+.||+|+||+||+|.+..+++.||||++....... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999999999999999997543221 112466889999999
Q ss_pred HccCCCCeeEEEEEEEe--CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCccee
Q 011647 123 HLTGHRNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200 (480)
Q Consensus 123 ~l~~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil 200 (480)
++. ||||+++++++.+ ...+++||||+++++|.+++ ..+.+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 92 ~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 92 KLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL 169 (298)
T ss_dssp TCC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred hCC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 998 9999999999986 67899999999999997754 4467999999999999999999999999999999999999
Q ss_pred cccCCCCCCeeEeecccceecCCCC-ccccCCCCcccccccccccc----CCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 011647 201 FSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (480)
Q Consensus 201 ~~~~~~~~~ikl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~~lltg~~pf~~~~~~ 275 (480)
+ +.++.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||......
T Consensus 170 ~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 170 V---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp E---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred E---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 9 456789999999998765432 33456899999999998653 367899999999999999999999988887
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.....+......++. .+.+++++.+||.+||+.||++|||+.++|+||||+
T Consensus 247 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 247 CLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 777777766554443 357899999999999999999999999999999996
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=384.75 Aligned_cols=265 Identities=36% Similarity=0.660 Sum_probs=235.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--C----hhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--N----RDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~----~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
.+.++|.+.+.||+|+||.||+|.++.+++.||||++...... . ....+.+.+|+.+++++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3457899999999999999999999999999999998654311 1 123466889999999997799999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...+..++||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEecccc
Confidence 9999999999999999999999988899999999999999999999999999999999999999 4567799999999
Q ss_pred ceecCCCCccccCCCCcccccccccc-------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (480)
+.............||+.|+|||++. ..++.++||||||+++|+|++|..||...........+..+...++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 98876666666678999999999874 24788999999999999999999999998888888888888777776
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+.++.++..+.++|.+||+.||++|||+.++|+||||+...
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 66678999999999999999999999999999999998543
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=393.83 Aligned_cols=260 Identities=29% Similarity=0.568 Sum_probs=218.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.++|++.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|+.+++.+. ||||+++++++.+++..+
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 81 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 81 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 45789999999999999999999999999999999865432 223366889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceeccC
Confidence 999999999999999888889999999999999999999999999999999999999 45677999999999865422
Q ss_pred C---ccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCH
Q 011647 225 D---VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
. ......||+.|+|||++.+. ++.++|||||||++|+|++|..||...... ........... ...++..+++
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKIDS 236 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--TSTTGGGSCH
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--cCCccccCCH
Confidence 2 23456899999999998653 477899999999999999999999876553 22222222222 2233567899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
++.+||.+||..||++|||+.|+++||||+....
T Consensus 237 ~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~ 270 (323)
T 3tki_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (323)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence 9999999999999999999999999999986543
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-50 Score=428.83 Aligned_cols=257 Identities=27% Similarity=0.515 Sum_probs=232.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..++..+.+||+|+++++++.+.+.+||
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 46799999999999999999999999999999999765443444567888999999988779999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC-CC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~-~~ 224 (480)
||||++||+|.+++...+.+++..++.|+.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++... ..
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCC
Confidence 99999999999999998999999999999999999999999999999999999999 556789999999998643 33
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+..+++..+......++. .+++++.+|
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~l 572 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAI 572 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT----TSCHHHHHH
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHHHH
Confidence 44556789999999999864 5899999999999999999999999999999999999988776653 689999999
Q ss_pred HHHhcccCcCCCCCH-----HHHhcCCcccc
Q 011647 304 VKKMLHADPKERLSA-----AEVLNHPWMRV 329 (480)
Q Consensus 304 i~~~L~~dp~~R~t~-----~~~l~h~~~~~ 329 (480)
|.+||+.||.+||++ +++++||||+.
T Consensus 573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp HHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred HHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence 999999999999997 99999999974
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-51 Score=418.82 Aligned_cols=257 Identities=30% Similarity=0.530 Sum_probs=226.3
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+++++. ||||+++++++.+.+.+|
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCEEE
Confidence 3567999999999999999999999999999999997654434445677899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||++||+|.+++...+. +++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceecc
Confidence 99999999999999987544 9999999999999999999999999999999999999 456789999999999876
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ...+...+......++ ..++
T Consensus 338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s 413 (576)
T 2acx_A 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFS 413 (576)
T ss_dssp TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSC
T ss_pred cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCC
Confidence 6666666799999999999875 58999999999999999999999998753 3445555555444333 4689
Q ss_pred HHHHHHHHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+++.+||.+||+.||.+|| +++++++||||+.
T Consensus 414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 9999999999999999999 8999999999985
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-50 Score=384.78 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=212.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.+ .+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcC-CCCEeeeeeEEccCCeEEEE
Confidence 4799999999999999999999 5789999999865432 2233467889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+.+ +|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCccc
Confidence 999975 898888764 679999999999999999999999999999999999999 45678999999999865432
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------------ 290 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~------------ 290 (480)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 23345578999999999864 4899999999999999999999999988877666655431110000
Q ss_pred -------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 291 -------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 291 -------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.....+++++.+||.+||+.||++|||++++|+||||+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 012357899999999999999999999999999999984
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-50 Score=389.34 Aligned_cols=260 Identities=26% Similarity=0.442 Sum_probs=206.6
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++.+.||+|+||+||+|.++.+++.||+|++.... .....+.+.+|+.+++++. ||||+++++++.+++.+++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCeEEEE
Confidence 57999999999999999999999999999999986543 2233467889999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 147 MDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
|||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCcccee
Confidence 99997 5999888654 359999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCC-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC-------
Q 011647 221 FKPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------- 290 (480)
Q Consensus 221 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~------- 290 (480)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.......+.
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 6432 23445689999999999864 4899999999999999999999999998887777666432111000
Q ss_pred -----------------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 291 -----------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 291 -----------------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
.....++.++.+||.+||+.||++|||+.++|+||||+.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 0112578899999999999999999999999999999876543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-50 Score=383.01 Aligned_cols=259 Identities=33% Similarity=0.614 Sum_probs=225.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..++..||+|++.............+.+|+.+++++. ||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEE
Confidence 3468999999999999999999999999999999986544333344577899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC---
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcc
Confidence 999999999999999988899999999999999999999999999999999999999 45677999999998654332
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+......++ ..+++++.+|
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 237 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL 237 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHH
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHHHH
Confidence 2345689999999999865 478899999999999999999999999988888888777655543 3578999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
|.+||+.||.+|||+.++|+||||+....
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred HHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 99999999999999999999999986543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-51 Score=409.87 Aligned_cols=264 Identities=38% Similarity=0.681 Sum_probs=218.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC-----hhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----RDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++.+..... ......+.+|+.+++++. ||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC-CTTBCCCCEEEE
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC-CCCEeeEEEEEe
Confidence 35678999999999999999999999999999999997654321 122235789999999998 999999999985
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
.+.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++..+.+..+||+|||++
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred -cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 4568999999999999999988889999999999999999999999999999999999999987666778999999999
Q ss_pred eecCCCCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~ 293 (480)
+...........+||+.|+|||++. ..++.++|||||||++|+|++|..||..... ......+..+...+....+
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~ 369 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhh
Confidence 8876555556678999999999874 3477899999999999999999999976543 3444556666655555455
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
..+++.+.+||.+||+.||++|||++++|+||||+.
T Consensus 370 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 678999999999999999999999999999999973
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-50 Score=383.64 Aligned_cols=265 Identities=38% Similarity=0.693 Sum_probs=229.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
+.++|.+.+.||+|+||+||+|.+..+++.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKT 81 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCC
Confidence 34679999999999999999999999999999999876543221 23678999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-CCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg~a~~ 220 (480)
..++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++ ....+||+|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999998888999999999999999999999999999999999999996432 233799999999988
Q ss_pred cCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
...........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......++...++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHH
Confidence 765555556789999999999864 5899999999999999999999999999888888888776665554445678999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.++|.+||..||++|||+.++|+||||+..
T Consensus 242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 9999999999999999999999999999854
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-50 Score=387.90 Aligned_cols=258 Identities=25% Similarity=0.358 Sum_probs=212.3
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
...+.++|.+.+.||+|+||+||+|.+..+++.||||++..... ..........|+..+.++..||||+++++++.+++
T Consensus 52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34456789999999999999999999999999999998765332 33344556667777777756999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.+++||||+ +++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTCEE
T ss_pred EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceeeee
Confidence 999999999 66888887764 469999999999999999999999999999999999999 4567799999999988
Q ss_pred cCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
...........||+.|+|||++.+.++.++|||||||++|+|++|..|+.+... ...+..... +......+++++
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~l 281 (311)
T 3p1a_A 207 LGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYL--PPEFTAGLSSEL 281 (311)
T ss_dssp CC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCC--CHHHHTTSCHHH
T ss_pred cccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCC--CcccccCCCHHH
Confidence 765555556679999999999988899999999999999999999777655322 233333222 111234689999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.++|.+||+.||++|||+.++|+||||+.
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 282 RSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 99999999999999999999999999975
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-50 Score=398.55 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=216.7
Q ss_pred ccceeecceeccc--CCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 66 RNTYIFGRELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 66 ~~~y~~~~~lG~G--~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.++|++++.||+| +||+||+|+++.+++.||||++..... .....+.+.+|+.+++++. ||||+++++++.+.+.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEE
Confidence 4689999999999 999999999999999999999976433 4455678899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 144 NLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
++|||||++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEEC
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceee
Confidence 9999999999999999875 679999999999999999999999999999999999999 45678999999998654
Q ss_pred CCC--------CccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc---
Q 011647 222 KPG--------DVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--- 287 (480)
Q Consensus 222 ~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~--- 287 (480)
... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 221 11223479999999999865 4899999999999999999999999876654444333222111
Q ss_pred ---------------------------------------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 288 ---------------------------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 288 ---------------------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
........+++++.+||.+||+.||++|||+.++|+||||+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~ 338 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence 00112345789999999999999999999999999999998
Q ss_pred ccCC
Q 011647 329 VDGD 332 (480)
Q Consensus 329 ~~~~ 332 (480)
....
T Consensus 339 ~~~~ 342 (389)
T 3gni_B 339 QIKR 342 (389)
T ss_dssp GC--
T ss_pred HHhh
Confidence 6544
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-50 Score=395.20 Aligned_cols=261 Identities=28% Similarity=0.440 Sum_probs=214.9
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH- 141 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~- 141 (480)
..+.++|.+.+.||+|+||+||+|.+..+|+.||||++... .......+.+.+|+.++++++ ||||+++++++....
T Consensus 21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~ 98 (367)
T 1cm8_A 21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDET 98 (367)
T ss_dssp ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSST-TSSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSS
T ss_pred eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecCCc
Confidence 34567899999999999999999999999999999998643 234445678899999999998 999999999997653
Q ss_pred -----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 142 -----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 142 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
.+|+||||+ +++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg 173 (367)
T 1cm8_A 99 LDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFG 173 (367)
T ss_dssp TTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred cccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCEEEEeee
Confidence 469999999 8899888865 679999999999999999999999999999999999999 456789999999
Q ss_pred cceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc-------
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------- 287 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~------- 287 (480)
+++.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+......
T Consensus 174 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 174 LARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp TCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9987543 3455689999999998864 5899999999999999999999999988877666655431111
Q ss_pred ----------------CCC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 288 ----------------FSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 288 ----------------~~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
... ..++.+++++.+||.+||..||.+|||++++|+||||+....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 111 123567999999999999999999999999999999986544
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=397.38 Aligned_cols=269 Identities=35% Similarity=0.659 Sum_probs=228.5
Q ss_pred cccccccceeecceecccCCeEEEEEEEcCCCceEEEEEeccccc--CChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 61 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
....+.++|.+.+.||+|+||+||+|.+..+++.||+|++..... ......+.+.+|+.++++++ ||||+++++++.
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~ 98 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYE 98 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC-CTTBCCEEEEEE
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC-CCCcceeehhhc
Confidence 345567889999999999999999999999999999999875432 13445678999999999998 999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHh----------------------------------------cCCCCHHHHHHHHHHHH
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIA----------------------------------------KGHYSERAAANLCRQMV 178 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~ 178 (480)
+.+..++|||||+|++|.+++.. ...+++..++.++.||+
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999988741 11246788899999999
Q ss_pred HHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-----ccccCCCCcccccccccc---ccCCCch
Q 011647 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLR---RNYGAEA 250 (480)
Q Consensus 179 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~ 250 (480)
.||.|||++||+||||||+|||++.+ ....+||+|||++....... ......||+.|+|||++. ..++.++
T Consensus 179 ~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 179 SALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999999999999999999999642 23479999999998753211 234567999999999885 3588999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 251 DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
|||||||++|+|++|..||.+....+....+......++.+.+..+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~ 337 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF 337 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccC
Confidence 99999999999999999999999988888888887777766666789999999999999999999999999999999865
Q ss_pred C
Q 011647 331 G 331 (480)
Q Consensus 331 ~ 331 (480)
.
T Consensus 338 ~ 338 (345)
T 3hko_A 338 S 338 (345)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=379.31 Aligned_cols=264 Identities=31% Similarity=0.519 Sum_probs=233.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCEEE
Confidence 4578999999999999999999999999999999997765555566788999999999997 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceecccC
Confidence 999999999999999888899999999999999999999999999999999999999 45677999999999876432
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+.......+ ..+++.+.+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 244 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS 244 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHH
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHHHHH
Confidence 23345679999999999865 478899999999999999999999999888777777776654433 367899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCCCCCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~ 336 (480)
+|.+||+.||++|||+.++++||||+....+...
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~~~ 278 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLNDEFFTSGYIPARL 278 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCC
T ss_pred HHHHHcccChhhCcCHHHHhhChheecCCcCCCC
Confidence 9999999999999999999999999876554433
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=396.33 Aligned_cols=258 Identities=26% Similarity=0.478 Sum_probs=216.0
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC-CCCeeEEEEEEEeCCeEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~~~~~~~~~~~~~ 144 (480)
..+|.+++.||+|+||+||+|.+.. ++.||||++..... .....+.+.+|+.+++++.. ||||+++++++..++.+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 4569999999999999999999876 89999999875433 44556789999999999974 699999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||| +.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++......
T Consensus 133 lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCCC---
T ss_pred EEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCccccccCC
Confidence 9999 56889999999988999999999999999999999999999999999999994 367999999999876433
Q ss_pred C---ccccCCCCccccccccccc------------cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcC
Q 011647 225 D---VFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDF 288 (480)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~ 288 (480)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+..+.......
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 287 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence 2 2345689999999998854 588899999999999999999999987543 34455555544333
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
..+ ...+.++.+||.+||..||.+|||+.++|+||||+....
T Consensus 288 ~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 329 (390)
T 2zmd_A 288 EFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329 (390)
T ss_dssp CCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC-
T ss_pred CCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCc
Confidence 322 245789999999999999999999999999999986544
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=409.73 Aligned_cols=261 Identities=28% Similarity=0.453 Sum_probs=211.2
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+.++|.+++.||+|+||+||+|.+..+++.||||++... .......+.+.+|+.+++.+. ||||+++++++...
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~ 136 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTL 136 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCST
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCC-CCCCCcEEEEEccCCcc
Confidence 4568899999999999999999999999999999999754 234455678899999999998 99999999999654
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
..+|+||||+.+ +|.+.+. ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 137 ~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 137 EEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 210 (464)
T ss_dssp TTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCC
T ss_pred ccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEEe
Confidence 457999999966 5666664 359999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc---------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------- 287 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~--------- 287 (480)
++...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 988766555667899999999998865 5899999999999999999999999998877666665432110
Q ss_pred -------------CCCCCC----CC------------CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 288 -------------FSSDPW----PN------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 288 -------------~~~~~~----~~------------~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+....+ +. .++++.+||.+||..||++|||++|+|+||||+....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 364 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 364 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence 000000 00 1567999999999999999999999999999986543
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=384.53 Aligned_cols=262 Identities=28% Similarity=0.513 Sum_probs=216.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEE
Confidence 367999999999999999999999999999999986543 23344577889999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC---
T ss_pred EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCcc
Confidence 99999999999988888889999999999999999999999999999999999999 45678999999999876532
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC----------------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~---------------- 286 (480)
.......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+.....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 23345689999999998854 579999999999999999999999998887666554432110
Q ss_pred ---cCCCC--------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 287 ---DFSSD--------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 287 ---~~~~~--------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
..+.. .++.+++++.+||.+||+.||.+|||++++|+||||+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 01110 12568899999999999999999999999999999986543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=379.28 Aligned_cols=261 Identities=31% Similarity=0.631 Sum_probs=229.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCEEEE
Confidence 467999999999999999999999999999999986543323334577899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECSSS-
T ss_pred EEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCccc-
Confidence 99999999999999988899999999999999999999999999999999999999 45677999999999765432
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+......++ +.++.++.++|
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li 243 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLI 243 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHHH
Confidence 2345679999999999875 488999999999999999999999999888887777777655443 36899999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
.+||..||.+|||+.++++||||+.......
T Consensus 244 ~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~ 274 (284)
T 2vgo_A 244 SKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 274 (284)
T ss_dssp HHHSCSSGGGSCCHHHHHTCHHHHHHCCCCC
T ss_pred HHHhhcCHhhCCCHHHHhhCHHHHhhccccC
Confidence 9999999999999999999999986554443
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=378.24 Aligned_cols=258 Identities=35% Similarity=0.624 Sum_probs=219.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+++.||+|+||.||+|.+..+++.||||++...........+.+.+|+.+++.+. ||||+++++++...+..+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 87 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDFF 87 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeEE
Confidence 4578999999999999999999999999999999987544333345678999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGCCCC-
T ss_pred EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeecccccccCCC
Confidence 999999999999999988899999999999999999999999999999999999999 45677999999999876655
Q ss_pred CccccCCCCcccccccccccc-C-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......||+.|+|||++.+. + +.++||||||+++|+|++|..||...........+.......+ ..++..+.+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 240 (276)
T 2h6d_A 165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVAT 240 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHHH
Confidence 445566899999999998764 3 5789999999999999999999998888888877776654433 357899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+|.+||+.||++|||+.++++||||+..
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHccCChhhCCCHHHHHhChhhccC
Confidence 9999999999999999999999999854
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=391.73 Aligned_cols=264 Identities=39% Similarity=0.691 Sum_probs=221.3
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-----ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
.+.++|.+.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++++. ||||+++++++.
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~ 85 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC-CTTBCCEEEEEE
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC-CCCCceEeeEEc
Confidence 4567899999999999999999999999999999998754321 1122345889999999997 999999999987
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
.+. +++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+..+||+|||++
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred CCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 655 8999999999999999988889999999999999999999999999999999999999976656667999999999
Q ss_pred eecCCCCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 293 (480)
.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+...+....+
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh
Confidence 8875544445567999999999873 45889999999999999999999999765432 344445555544433334
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
..+++++.+||.+||..||++|||+.++|+||||+.
T Consensus 245 ~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 578999999999999999999999999999999974
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=393.57 Aligned_cols=266 Identities=24% Similarity=0.436 Sum_probs=222.5
Q ss_pred cccCCcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc----CCCCee
Q 011647 56 RVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT----GHRNIV 131 (480)
Q Consensus 56 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~----~hp~iv 131 (480)
.........+.++|.+.+.||+|+||+||+|++..+++.||||++... ......+.+|+.+++.+. +||||+
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 334455566788999999999999999999999999999999998632 234466788999999986 599999
Q ss_pred EEEEEEEeCCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC-----
Q 011647 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS----- 204 (480)
Q Consensus 132 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~----- 204 (480)
++++++...+..++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEE
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccc
Confidence 9999999999999999999 899999998754 59999999999999999999999999999999999999631
Q ss_pred -----------------CCCCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCC
Q 011647 205 -----------------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGV 266 (480)
Q Consensus 205 -----------------~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~ 266 (480)
..++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 1267899999999987543 2345689999999998864 5899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHcCCCcCCCC---------------------CCC---------------------CCCHHHHHHH
Q 011647 267 PPFWGETEQSIFDAILRGHIDFSSD---------------------PWP---------------------NISSSAKDIV 304 (480)
Q Consensus 267 ~pf~~~~~~~~~~~~~~~~~~~~~~---------------------~~~---------------------~~~~~~~~li 304 (480)
.||.+....+....+......++.. .|+ ..++.+.+||
T Consensus 257 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 336 (360)
T 3llt_A 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFL 336 (360)
T ss_dssp CSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHH
Confidence 9999888777666654432222100 000 1237788999
Q ss_pred HHhcccCcCCCCCHHHHhcCCccc
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.+||+.||.+|||+.++|+||||+
T Consensus 337 ~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 337 YSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHhcCChhhCCCHHHHhcCcccC
Confidence 999999999999999999999996
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=389.41 Aligned_cols=264 Identities=28% Similarity=0.485 Sum_probs=221.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe------
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------ 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~------ 139 (480)
.++|.+.+.||+|+||+||+|++..+++.||||++..... .......+.+|+.+++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhcc-CCCcccHhheeeccccccc
Confidence 4689999999999999999999999999999999865433 2233467789999999998 9999999999877
Q ss_pred --CCeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
.+.+++||||+.+ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCT
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEccch
Confidence 4568999999975 777777654 579999999999999999999999999999999999999 456789999999
Q ss_pred cceecCCC-----CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 217 LSVFFKPG-----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 217 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 99876422 22345678999999998864 479999999999999999999999999988877777665443333
Q ss_pred CCCCCCC----------------------------CHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 290 SDPWPNI----------------------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 290 ~~~~~~~----------------------------~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
...++.. ++++.+||.+||+.||++|||++|+|+||||+....++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 323 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence 3333332 678999999999999999999999999999987655543
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=407.96 Aligned_cols=256 Identities=29% Similarity=0.510 Sum_probs=224.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+++++. ||||+++++++.+...+|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCEEEE
Confidence 467999999999999999999999999999999997654444455678899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 146 IMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeec
Confidence 99999999999998764 369999999999999999999999999999999999999 55778999999999887
Q ss_pred CCCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcCCCcCCCCCCCC
Q 011647 222 KPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ...+...+......++ ..
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~ 415 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DK 415 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----TT
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----cc
Confidence 54433 344689999999999875 58999999999999999999999998753 4566666666655443 46
Q ss_pred CCHHHHHHHHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 296 ISSSAKDIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+++++.+||.+||+.||.+||+ ++++++||||+.
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence 8999999999999999999995 589999999984
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=392.60 Aligned_cols=260 Identities=28% Similarity=0.462 Sum_probs=211.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.+..+++.||||++..... ......+.+|+.+++++. ||||+++++++.+.+.+++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEE
Confidence 479999999999999999999999999999999864331 111123457999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||+. ++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC----
T ss_pred ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCcccccccCCc
Confidence 99996 58988887654 59999999999999999999999999999999999999 45677999999999865422
Q ss_pred CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC----------
Q 011647 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP---------- 292 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---------- 292 (480)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+...........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 23345678999999998864 479999999999999999999999999888777766654222111111
Q ss_pred ----------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 293 ----------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 293 ----------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
.+.+++++.+||.+||+.||++|||++|+|+||||......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 23578999999999999999999999999999999865543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=391.14 Aligned_cols=264 Identities=25% Similarity=0.402 Sum_probs=222.6
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|.+.+.||+|+||+||+|.+..+++.||||++.............+.+|+.+++++. ||||+++++++.....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETP 86 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC-CTTBCCEEEEEEEEET
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC-CCCcceEEEeeeccCC
Confidence 346678999999999999999999999999999999997765555556678999999999998 9999999999876543
Q ss_pred ----EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 143 ----VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 143 ----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
.|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~a 163 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIA 163 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTSCEEECCCSCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---CCCCEEEeeccCc
Confidence 499999999999999999888999999999999999999999999999999999999994 4667999999999
Q ss_pred eecCCCC----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 219 VFFKPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 219 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.................+....
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHS
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccccc
Confidence 8654322 2234579999999999865 5889999999999999999999999998887777666665544433334
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+++++.++|.+||+.||++||++.++|.|+|++..
T Consensus 244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999864
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=377.47 Aligned_cols=258 Identities=32% Similarity=0.580 Sum_probs=199.0
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC-CTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC-CCCeEeEEEEEccCCeEEE
Confidence 357999999999999999999999999999999997544333344678999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeeccCC
Confidence 99999999999998865 579999999999999999999999999999999999999 45677999999999876432
Q ss_pred -CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+....... ...++.++.+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 241 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM----PSFLSIEAKD 241 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCC----CTTSCHHHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCC----ccccCHHHHH
Confidence 22334679999999998865 47889999999999999999999998776555444433322222 2357899999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+|.+||+.||++|||+.++|+||||....
T Consensus 242 li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999999999999999999999998543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-49 Score=380.35 Aligned_cols=256 Identities=30% Similarity=0.524 Sum_probs=221.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|...+.||+|+||+||+|.+..+|+.||||++.... ....+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 120 (321)
T 2c30_A 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVL 120 (321)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEE
Confidence 34788889999999999999999999999999986543 234577899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||++|++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 121 ~e~~~~~~L~~~l~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 121 MEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp ECCCCSCBHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSC
T ss_pred EecCCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCcc
Confidence 99999999988775 4579999999999999999999999999999999999999 456779999999998765432
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+.....+. ......+++.+.++|
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li 275 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LKNSHKVSPVLRDFL 275 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-CTTGGGSCHHHHHHH
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-cCccccCCHHHHHHH
Confidence 3345689999999999865 48899999999999999999999999888877777766543322 122346789999999
Q ss_pred HHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+||+.||++|||+.++|+||||....
T Consensus 276 ~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 276 ERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHccCChhhCcCHHHHhcChhhccCC
Confidence 999999999999999999999998654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-49 Score=382.84 Aligned_cols=255 Identities=26% Similarity=0.512 Sum_probs=213.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--CCe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHS 142 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~~~ 142 (480)
..++|++++.||+|+||+||+|.+..+++.||||++... ..+.+.+|+.+++++.+||||+++++++.+ ...
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 357899999999999999999999999999999998632 347789999999999889999999999987 677
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.++||||+.+++|.+++. .+++..++.++.||+.||.|||++||+||||||+|||++. ++..+||+|||++....
T Consensus 108 ~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEECC
T ss_pred eEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCEEEEEeCCCceEcC
Confidence 999999999999988774 4899999999999999999999999999999999999953 23479999999999877
Q ss_pred CCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHH-------------HcCCC
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAI-------------LRGHI 286 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~-------------~~~~~ 286 (480)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+..+ .....
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 6666667789999999998864 48999999999999999999999995433 22222211 11111
Q ss_pred cCC--------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 287 DFS--------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 287 ~~~--------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
... ......+++++.+||.+||+.||++|||++++|+||||+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 110 11112378999999999999999999999999999999854
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-49 Score=395.73 Aligned_cols=264 Identities=25% Similarity=0.468 Sum_probs=211.6
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++... .......+.+.+|+.+++++. ||||+++++++...
T Consensus 23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~ 100 (432)
T 3n9x_A 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLL 100 (432)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCCC
Confidence 4567899999999999999999999999999999999643 234455678999999999998 99999999998766
Q ss_pred --CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 --HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..+|+||||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFGla 176 (432)
T 3n9x_A 101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLA 176 (432)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCCc
Confidence 57999999995 5999999888889999999999999999999999999999999999999 45678999999999
Q ss_pred eecCCCC-----------------------ccccCCCCccccccccc-c-ccCCCchhHHHHHHHHHHHHhC--------
Q 011647 219 VFFKPGD-----------------------VFKDLVGSAYYVAPEVL-R-RNYGAEADIWSAGVILYILLSG-------- 265 (480)
Q Consensus 219 ~~~~~~~-----------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~lltg-------- 265 (480)
+...... .....+||+.|+|||++ . ..++.++|||||||++|||++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~ 256 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSG
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccc
Confidence 8764322 23567899999999986 3 4589999999999999999984
Q ss_pred ---CCCCCCCCh-----------------HHHHHHHH------------------------cCCCcCCC---CCCCCCCH
Q 011647 266 ---VPPFWGETE-----------------QSIFDAIL------------------------RGHIDFSS---DPWPNISS 298 (480)
Q Consensus 266 ---~~pf~~~~~-----------------~~~~~~~~------------------------~~~~~~~~---~~~~~~~~ 298 (480)
.++|.+... ...+..+. ......+. ..++.+++
T Consensus 257 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 336 (432)
T 3n9x_A 257 TNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336 (432)
T ss_dssp GGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred ccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence 444433320 11111111 10000000 01356899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
++.+||.+||..||.+|||++|+|+||||+.....
T Consensus 337 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~ 371 (432)
T 3n9x_A 337 DGINLLESMLKFNPNKRITIDQALDHPYLKDVRKK 371 (432)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCT
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCc
Confidence 99999999999999999999999999999865443
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=388.92 Aligned_cols=255 Identities=29% Similarity=0.513 Sum_probs=219.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh-----hcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++........ ...+.+.+|+.+++++. ||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~ 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFE 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe
Confidence 456789999999999999999999999999999999976543222 13346778999999997 999999999999
Q ss_pred eCCeEEEEEecCCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 139 DRHSVNLIMDLCAGG-ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
+.+.+++||||+.+| +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGS 176 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTT
T ss_pred eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeeccc
Confidence 999999999999766 999999988899999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
+.............||+.|+|||++.+. ++.++|||||||++|+|++|..||..... ..... ......
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~----~~~~~~ 246 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAA----IHPPYL 246 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTC----CCCSSC
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhc----cCCCcc
Confidence 9987766666677899999999998654 37889999999999999999999975322 11111 122235
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+++++.+||.+||+.||++|||+.++++||||+....
T Consensus 247 ~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 8999999999999999999999999999999986543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-49 Score=386.59 Aligned_cols=258 Identities=26% Similarity=0.455 Sum_probs=222.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.....|.+.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.++++++ ||||+++++++..++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 129 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTA 129 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCeE
Confidence 34567999999999999999999999999999999997654434445678899999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+. |+|.+.+. ..+.+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSS
T ss_pred EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCceecC
Confidence 99999997 57877775 456799999999999999999999999999999999999994 56779999999998654
Q ss_pred CCCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
. .....||+.|+|||++. +.++.++|||||||++|+|++|..||.+.........+.....+.. ....+++
T Consensus 206 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 280 (348)
T 1u5q_A 206 P---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSE 280 (348)
T ss_dssp S---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCH
T ss_pred C---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCCH
Confidence 3 23568999999999873 4588999999999999999999999998887776666655443222 2346899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+.+||.+||+.||++|||++++|+||||....
T Consensus 281 ~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 999999999999999999999999999997653
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=373.57 Aligned_cols=257 Identities=22% Similarity=0.421 Sum_probs=219.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----CC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----~~ 141 (480)
...|++.+.||+|+||+||+|.+..++..||+|++..... .....+.+.+|+.+++++. ||||+++++++.. ..
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCc
Confidence 3568999999999999999999999999999999875443 4455688999999999998 9999999999865 46
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++| |+||||||+|||++ ..++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred eEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCcc
Confidence 68999999999999999998889999999999999999999999999 99999999999995 246689999999997
Q ss_pred ecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCH
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... .......||+.|+|||++.+.++.++||||||+++|+|++|..||...... .....+..+... .......++
T Consensus 181 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 257 (290)
T 1t4h_A 181 LKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIP 257 (290)
T ss_dssp GCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCH
T ss_pred cccc-cccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--cccCCCCCH
Confidence 6443 334556899999999999888999999999999999999999999875543 344444333221 112235678
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
++.++|.+||+.||.+|||+.++|+||||+.
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 9999999999999999999999999999984
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-50 Score=399.67 Aligned_cols=259 Identities=29% Similarity=0.468 Sum_probs=210.7
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+....+|.+.+.||+|+||+||+|++..++. ||+|.+..... ...+|+.+++.+. ||||+++++++...+
T Consensus 35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~-h~niv~l~~~~~~~~ 105 (394)
T 4e7w_A 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVK-HPNVVDLKAFFYSNG 105 (394)
T ss_dssp CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCC-CTTBCCEEEEEEEES
T ss_pred CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCC-CCCcceEEEEEEecC
Confidence 34456789999999999999999999987765 88887754321 1237999999998 999999999985443
Q ss_pred ------eEEEEEecCCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 142 ------SVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 142 ------~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
.+++||||+.++ +...+. ....+++..++.++.||+.||.|||++||+||||||+|||++ ..++.+|
T Consensus 106 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~k 182 (394)
T 4e7w_A 106 DKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLK 182 (394)
T ss_dssp SSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEE
T ss_pred CCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEE
Confidence 388999999764 433332 356799999999999999999999999999999999999995 2467799
Q ss_pred EeecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC----
Q 011647 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---- 285 (480)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~---- 285 (480)
|+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 183 L~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~ 262 (394)
T 4e7w_A 183 LIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS 262 (394)
T ss_dssp ECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred EeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999998766666667789999999998854 48999999999999999999999999988766665554310
Q ss_pred -------------CcCCC---C-----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 286 -------------IDFSS---D-----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 286 -------------~~~~~---~-----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
..++. . ..+.+++++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 01110 0 12347899999999999999999999999999999986433
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-49 Score=377.19 Aligned_cols=264 Identities=26% Similarity=0.409 Sum_probs=222.6
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|++.+.||+|+||+||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~ 85 (294)
T 4eqm_A 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDDC 85 (294)
T ss_dssp SCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-BTTBCCEEEEEECSSE
T ss_pred hHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC-CCCCceEEEeeeeCCe
Confidence 446678999999999999999999999999999999987655555566788999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC-
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCccccc
Confidence 99999999999999999988899999999999999999999999999999999999999 456779999999998654
Q ss_pred CCC--ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC-CCCCCCCCCH
Q 011647 223 PGD--VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-SSDPWPNISS 298 (480)
Q Consensus 223 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 298 (480)
... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+...............+. +....+.+|+
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ 242 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCH
Confidence 332 2234579999999998865 48899999999999999999999999888766655554443321 1223457899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.+.++|.+||..||.+||+..+.+.+.|....
T Consensus 243 ~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 243 SLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred HHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 99999999999999999987888888877653
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-49 Score=384.94 Aligned_cols=261 Identities=26% Similarity=0.471 Sum_probs=217.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||+||+|.+..+++.||||++.... ......+.+.+|+.+++++. ||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 100 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWY 100 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEE
Confidence 4468999999999999999999999999999999986543 23344567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~- 223 (480)
+||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC------
T ss_pred EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecCC
Confidence 999999999998888778889999999999999999999999999999999999999 4567899999999976543
Q ss_pred CCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC---------------
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------------- 286 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~--------------- 286 (480)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.....
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 233445689999999999865 478999999999999999999999998887665554432110
Q ss_pred ----cCCC--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 287 ----DFSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 287 ----~~~~--------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+. ..++.+++++.+||.+||+.||++|||+.|+|+||||+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 0000 0124678999999999999999999999999999999864
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=381.02 Aligned_cols=265 Identities=37% Similarity=0.666 Sum_probs=193.6
Q ss_pred ccccceeecc-eecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe---
Q 011647 64 DVRNTYIFGR-ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (480)
Q Consensus 64 ~~~~~y~~~~-~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--- 139 (480)
.+.++|.+.+ .||+|+||+||+|.++.+++.||||++... ....+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 3567899965 599999999999999999999999998542 2233444444444459999999999876
Q ss_pred -CCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 140 -RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 140 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...+++|||||+|++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 556899999999999999998764 69999999999999999999999999999999999999876667789999999
Q ss_pred cceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHcCCCcCCCC
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSI----FDAILRGHIDFSSD 291 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~----~~~~~~~~~~~~~~ 291 (480)
++..... .......||+.|+|||++.+ .++.++||||||+++|+|++|..||........ ...+......++..
T Consensus 177 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 177 FAKETTQ-NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp TCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred cceeccc-cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 9987543 23345678999999999854 588899999999999999999999977665433 23334444555556
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCc
Q 011647 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337 (480)
Q Consensus 292 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~ 337 (480)
.+..+++++.+||.+||+.||.+|||+.++|+||||+........+
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~ 301 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCCCB
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCCCc
Confidence 6678999999999999999999999999999999998654433333
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-48 Score=380.92 Aligned_cols=261 Identities=26% Similarity=0.458 Sum_probs=212.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCC-CCeeEEEEEEEeCCe
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHS 142 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~~~~~~~~~~~ 142 (480)
....+|.+.+.||+|+||+||+|.+. +++.||||++.... ......+.+.+|+.++.++.+| |||+++++++..+..
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 34578999999999999999999985 58899999987543 2445567899999999999832 999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+++|||+ .+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus 84 ~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 84 IYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC-
T ss_pred EEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccC
Confidence 9999995 5889999999999999999999999999999999999999999999999994 4569999999998764
Q ss_pred CCC---ccccCCCCcccccccccc------------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCC
Q 011647 223 PGD---VFKDLVGSAYYVAPEVLR------------RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHI 286 (480)
Q Consensus 223 ~~~---~~~~~~gt~~y~aPE~~~------------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~ 286 (480)
... .....+||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+.....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc
Confidence 332 223568999999999874 34788999999999999999999999875432 33334433322
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
... .....+.++.+||.+||+.||.+|||+.++|+||||+....+
T Consensus 239 ~~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~ 283 (343)
T 3dbq_A 239 EIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 283 (343)
T ss_dssp CCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC-
T ss_pred ccC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCCc
Confidence 222 123467899999999999999999999999999999865443
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-49 Score=390.12 Aligned_cols=257 Identities=30% Similarity=0.543 Sum_probs=216.8
Q ss_pred ccceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccC-ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.++|.+.+.||+|+||+||+|++. .+++.||||++...... .....+.+.+|+.+++++.+||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 468999999999999999999984 57899999998754321 12234567789999999977999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeec
Confidence 999999999999999999988899999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCC--ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcCCCcCCCCC
Q 011647 222 KPGD--VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~~~~~~~~~ 292 (480)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ...+...+......+
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 285 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---- 285 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC----
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCC----
Confidence 4322 2234579999999999864 36889999999999999999999997543 334444444443333
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
...++..+.+||.+||..||.+|| |+.++++||||+.
T Consensus 286 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 286 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 246899999999999999999999 9999999999974
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-49 Score=388.22 Aligned_cols=260 Identities=28% Similarity=0.429 Sum_probs=207.0
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+.+|+.+++.+. ||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 99 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL 99 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSCCST
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcC-CCCccceEEeecccccc
Confidence 45678999999999999999999999999999999986532 24445677899999999998 999999999997665
Q ss_pred ----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 142 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+++||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 100 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 100 EEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 173 (371)
T ss_dssp TTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCCCC
T ss_pred ccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEEEeec
Confidence 78999999965 7888775 459999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------ 290 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~------ 290 (480)
+............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+.........
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 987655444556789999999998865 5899999999999999999999999998887776666543211100
Q ss_pred -----------CC--------------CC-------CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 291 -----------DP--------------WP-------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 291 -----------~~--------------~~-------~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+. ++ ..++++.+||.+||..||.+|||++++|+||||+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 326 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 326 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence 00 00 0156789999999999999999999999999998543
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=383.77 Aligned_cols=263 Identities=25% Similarity=0.395 Sum_probs=213.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh--hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR--DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..++|.+.+.||+|+||+||+|.+..+|+.||||++........ ...+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC-CCCCCeEEEEEeeCCc
Confidence 45789999999999999999999999999999999865332111 11246789999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++||||+.+ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEecccceec
Confidence 9999999976 888887654 369999999999999999999999999999999999999 45678999999999876
Q ss_pred CCC-CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC------
Q 011647 222 KPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP------ 292 (480)
Q Consensus 222 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~------ 292 (480)
... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+......+..+...........
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence 432 23445689999999999854 378899999999999999999999999888777776654221111111
Q ss_pred ------------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 293 ------------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 293 ------------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+..++.++.+||.+||..||++|||+.|+|+||||+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~ 300 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG 300 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence 1456789999999999999999999999999999986543
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=369.57 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=213.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++..... .......+.+|+..+.++..||||+++++++.+.+..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 355789999999999999999999999999999999875432 3334577889999999995599999999999999999
Q ss_pred EEEEecCCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--------------
Q 011647 144 NLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-------------- 205 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-------------- 205 (480)
++||||+++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999998764 6799999999999999999999999999999999999996433
Q ss_pred --CCCCeeEeecccceecCCCCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 011647 206 --EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281 (480)
Q Consensus 206 --~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~ 281 (480)
....+||+|||++...... ....||+.|+|||++.+. ++.++|||||||++|+|++|.+|+.... ....+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~ 240 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEI 240 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHH
T ss_pred cCCceEEEEcccccccccCCc---cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHH
Confidence 4567999999999876543 234699999999998754 5579999999999999999988775432 23344
Q ss_pred HcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+.... ....+++++.++|.+||+.||++|||+.++|+||||+..
T Consensus 241 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 241 RQGRLPR---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HTTCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HcCCCCC---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 4443321 224689999999999999999999999999999999854
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=389.50 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=203.2
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-- 140 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~-- 140 (480)
..+.++|.+.+.||+|+||+||+|.+..+|+.||||++... .......+.+.+|+.+++.+. ||||+++++++...
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~ 102 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARS 102 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST-TSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCc
Confidence 44568899999999999999999999999999999998653 234445678889999999998 99999999998654
Q ss_pred ----CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 141 ----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 141 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
..+++|||++ +++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 103 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kL~DFG 177 (367)
T 2fst_X 103 LEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFG 177 (367)
T ss_dssp GGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECC--
T ss_pred cccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCEEEeecc
Confidence 5689999999 7899887765 679999999999999999999999999999999999999 456789999999
Q ss_pred cceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC--------
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-------- 286 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~-------- 286 (480)
+++.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 178 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 178 LARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9986542 2345689999999998864 589999999999999999999999999887766665543111
Q ss_pred ---------------cCCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 287 ---------------DFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 287 ---------------~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
..+.. .++.+++++.+||.+||..||.+|||+.++|+||||+....+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~ 321 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCC
Confidence 00111 124578999999999999999999999999999999865443
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=392.88 Aligned_cols=256 Identities=29% Similarity=0.454 Sum_probs=210.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
...+|.+.+.||+|+||+||+|.+..+++.||||++.... ....+|+++++++. ||||+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~ 123 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKK 123 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCC-CTTBCCEEEEEEEEETTT
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcC-CCCccceeeEEeccCCCC
Confidence 3457999999999999999999999999999999986432 12347999999998 99999999988432
Q ss_pred --CeEEEEEecCCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 141 --HSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
..+++||||+++ +|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++. +.+.+||+|
T Consensus 124 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~--~~~~~kl~D 200 (420)
T 1j1b_A 124 DEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 200 (420)
T ss_dssp TEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET--TTTEEEECC
T ss_pred cceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC--CCCeEEecc
Confidence 246799999976 6665554 3567999999999999999999999999999999999999953 345689999
Q ss_pred cccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC--------
Q 011647 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG-------- 284 (480)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~-------- 284 (480)
||+++...........+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+....+.+..+...
T Consensus 201 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 201 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp CTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred chhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999998765555566789999999998854 5899999999999999999999999998876665554331
Q ss_pred ---------CCcCCC---C-----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 285 ---------HIDFSS---D-----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 285 ---------~~~~~~---~-----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
...++. . ..+.+++++.+||.+||..||.+|||+.|+|+||||+...
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 011111 0 0135689999999999999999999999999999997543
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-49 Score=382.65 Aligned_cols=254 Identities=27% Similarity=0.416 Sum_probs=206.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC---
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~--- 141 (480)
+.++|.+.+.||+|+||+||+|+++.+++.||||++.... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCC-CTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEeccch
Confidence 3467999999999999999999999999999999986543 3345678999999999998 999999999986543
Q ss_pred ------------------------------------------------------eEEEEEecCCCCchHHHHHhcCC---
Q 011647 142 ------------------------------------------------------SVNLIMDLCAGGELFDRIIAKGH--- 164 (480)
Q Consensus 142 ------------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~--- 164 (480)
.+++|||||+|++|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 38999999999999999987644
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-------------ccccCC
Q 011647 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-------------VFKDLV 231 (480)
Q Consensus 165 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~-------------~~~~~~ 231 (480)
.++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....... ......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 5666789999999999999999999999999999999 456789999999998765432 223457
Q ss_pred CCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhccc
Q 011647 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (480)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 310 (480)
||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+.....+ ..+...++++.+||.+||+.
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~ 312 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFP---LLFTQKYPQEHMMVQDMLSP 312 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHHCS
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCC---cccccCChhHHHHHHHHccC
Confidence 9999999999865 589999999999999999998776521 12222223332211 11234578899999999999
Q ss_pred CcCCCCCHHHHhcCCcccc
Q 011647 311 DPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 311 dp~~R~t~~~~l~h~~~~~ 329 (480)
||++|||+.++|+||||+.
T Consensus 313 ~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 313 SPTERPEATDIIENAIFEN 331 (332)
T ss_dssp SGGGSCCHHHHHHSTTCCC
T ss_pred CCCcCCCHHHHhhchhhhc
Confidence 9999999999999999973
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=388.14 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=211.6
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~---- 139 (480)
...++|.+++.||+|+||+||+|.+..+|+.||||++..... ...+|+.+++.+. ||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLD-HVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCC-CTTBCCEEEEEEEC---
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcC-CCCccchhheeeecCcc
Confidence 345789999999999999999999999999999999864321 2347999999998 9999999999843
Q ss_pred ----------------------------------CCeEEEEEecCCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHH
Q 011647 140 ----------------------------------RHSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVV 181 (480)
Q Consensus 140 ----------------------------------~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l 181 (480)
...+++||||+++ +|.+.+. ..+.+++..++.++.||+.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3458899999975 7766554 457799999999999999999
Q ss_pred HHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHH
Q 011647 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVIL 259 (480)
Q Consensus 182 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il 259 (480)
.|||++||+||||||+|||++. .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++
T Consensus 155 ~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 155 GFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9999999999999999999952 456799999999998766666667789999999998764 489999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHcCC-----------------CcCCC---C-----CCCCCCHHHHHHHHHhcccCcCC
Q 011647 260 YILLSGVPPFWGETEQSIFDAILRGH-----------------IDFSS---D-----PWPNISSSAKDIVKKMLHADPKE 314 (480)
Q Consensus 260 ~~lltg~~pf~~~~~~~~~~~~~~~~-----------------~~~~~---~-----~~~~~~~~~~~li~~~L~~dp~~ 314 (480)
|+|++|..||.+....+.+..+.... ..++. . ....+++++.+||.+||+.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 99999999999988777666654311 01111 0 11347899999999999999999
Q ss_pred CCCHHHHhcCCcccc
Q 011647 315 RLSAAEVLNHPWMRV 329 (480)
Q Consensus 315 R~t~~~~l~h~~~~~ 329 (480)
|||+.|+|+||||+.
T Consensus 313 R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 313 RINPYEAMAHPFFDH 327 (383)
T ss_dssp SCCHHHHHTSGGGHH
T ss_pred CCCHHHHhcCHHHHH
Confidence 999999999999974
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=390.69 Aligned_cols=263 Identities=26% Similarity=0.421 Sum_probs=215.9
Q ss_pred cccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc-----CCCCeeEEEE
Q 011647 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHRNIVELKG 135 (480)
Q Consensus 61 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~hp~iv~~~~ 135 (480)
+...+..+|.+.+.||+|+||+||+|.+..+++.||||++... ......+.+|+.+++.+. +|+||+++++
T Consensus 91 ~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~ 166 (429)
T 3kvw_A 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166 (429)
T ss_dssp TTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred CCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence 4456778899999999999999999999999999999998643 233467788999988884 3779999999
Q ss_pred EEEeCCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 136 AYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
++...+.+++||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++ ...+||+
T Consensus 167 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-~~~vkL~ 244 (429)
T 3kvw_A 167 NFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-RSGIKVI 244 (429)
T ss_dssp EEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-SCCEEEC
T ss_pred ecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-CcceEEe
Confidence 9999999999999995 69999887654 499999999999999999999999999999999999995321 1239999
Q ss_pred ecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC---
Q 011647 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS--- 289 (480)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~--- 289 (480)
|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+.......+
T Consensus 245 DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 245 DFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322 (429)
T ss_dssp CCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 9999976542 3345689999999998865 589999999999999999999999999887766655542100000
Q ss_pred -----------------------------------------------CC-----CCCCCCHHHHHHHHHhcccCcCCCCC
Q 011647 290 -----------------------------------------------SD-----PWPNISSSAKDIVKKMLHADPKERLS 317 (480)
Q Consensus 290 -----------------------------------------------~~-----~~~~~~~~~~~li~~~L~~dp~~R~t 317 (480)
.. .....++++.+||.+||+.||++|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 00 00123788999999999999999999
Q ss_pred HHHHhcCCcccccC
Q 011647 318 AAEVLNHPWMRVDG 331 (480)
Q Consensus 318 ~~~~l~h~~~~~~~ 331 (480)
+.|+|+||||+...
T Consensus 403 a~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 403 PGQALRHPWLRRRL 416 (429)
T ss_dssp HHHHHTSTTTC---
T ss_pred HHHHhCChhhccCC
Confidence 99999999998653
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=368.58 Aligned_cols=260 Identities=29% Similarity=0.567 Sum_probs=220.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.++|.+.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+++.+. ||||+++++++.+.+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCEEE
Confidence 34679999999999999999999999999999999865432 234578899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECEET
T ss_pred EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCccccCCC
Confidence 9999999999999988777899999999999999999999999999999999999994 5677999999999865422
Q ss_pred C---ccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCCCCCCCCCH
Q 011647 225 D---VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
. ......||+.|+|||++.+. .+.++||||||+++|+|++|..||...... .....+...... ...+..+++
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDS 236 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCH
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCH
Confidence 2 23456799999999998653 467899999999999999999999876543 233333332221 223457899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.+.+||.+||+.||++|||+.++++||||+....
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 9999999999999999999999999999986543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=373.84 Aligned_cols=260 Identities=25% Similarity=0.465 Sum_probs=215.7
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-- 139 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-- 139 (480)
.....++|.+.+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++++.+||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3455678999999999999999999999999999999986432 2346788999999999669999999999976
Q ss_pred ----CCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 140 ----RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 140 ----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
.+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~~~kl~ 171 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLV 171 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEEC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCCCEEEe
Confidence 56899999999999999999764 569999999999999999999999999999999999999 456779999
Q ss_pred ecccceecCCCC-ccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC
Q 011647 214 DFGLSVFFKPGD-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 214 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~ 286 (480)
|||++....... ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+.....
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 251 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA 251 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc
Confidence 999988654322 234457999999999884 3488999999999999999999999988877666655554432
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
. ......++..+.+||.+||..||.+|||+.++++||||+..
T Consensus 252 ~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 252 P--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp C--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred c--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 2 22235689999999999999999999999999999999854
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=368.45 Aligned_cols=258 Identities=26% Similarity=0.452 Sum_probs=224.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
....|.+.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|+.+++++. ||||+++++++.+...++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 96 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLW 96 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEE
Confidence 44679999999999999999999999999999999865432 345688999999999997 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+||||+++++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 97 lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp EEEECCTTEEHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECBTT
T ss_pred EEEEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccceecCcc
Confidence 9999999999998875 4679999999999999999999999999999999999999 45677999999999876543
Q ss_pred C-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
. ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+....... ....++..+.+
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~ 249 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT---LEGNYSKPLKE 249 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---CCSSCCHHHHH
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCC---CccccCHHHHH
Confidence 2 2345679999999999865 57899999999999999999999999888777766665543321 23468999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
||.+||+.||.+|||+.++++||||.....
T Consensus 250 li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 250 FVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred HHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 999999999999999999999999986543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=383.79 Aligned_cols=263 Identities=30% Similarity=0.469 Sum_probs=218.3
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC---
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--- 140 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++... ......+.+.+|+.++.++. ||||+++++++...
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 100 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIE 100 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTT
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCcc
Confidence 3457899999999999999999999999999999998642 23444578899999999998 99999999998655
Q ss_pred --CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 --HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
...++||||+. ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 101 ~~~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 101 QMKDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA 175 (364)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred ccceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcce
Confidence 46899999996 599888765 579999999999999999999999999999999999999 45677999999999
Q ss_pred eecCCCC----ccccCCCCcccccccccc-c-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC----
Q 011647 219 VFFKPGD----VFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF---- 288 (480)
Q Consensus 219 ~~~~~~~----~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~---- 288 (480)
....... .....+||+.|+|||++. + .++.++|||||||++|+|++|..||.+....+....+.......
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 8764322 124458999999999864 3 48999999999999999999999999887766655553211100
Q ss_pred ----------------C---CC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 289 ----------------S---SD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 289 ----------------~---~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
+ .. .++.+++++.+||.+||+.||++|||+.++|+||||+....+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 324 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 324 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCcc
Confidence 0 00 1246789999999999999999999999999999998764433
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=389.79 Aligned_cols=264 Identities=27% Similarity=0.478 Sum_probs=198.2
Q ss_pred cccccceee-cceecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-
Q 011647 63 EDVRNTYIF-GRELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE- 138 (480)
Q Consensus 63 ~~~~~~y~~-~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~- 138 (480)
..+.+.|.+ +++||+|+||+||+|+++ .+++.||||++..... ...+.+|+.+++++. ||||+++++++.
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~-hpniv~~~~~~~~ 89 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELK-HPNVISLQKVFLS 89 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCC-CTTBCCCCEEEEE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcC-CCCeeeEeeEEec
Confidence 345567887 568999999999999976 5688999999864322 256889999999998 999999999995
Q ss_pred -eCCeEEEEEecCCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC-CCC
Q 011647 139 -DRHSVNLIMDLCAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AED 207 (480)
Q Consensus 139 -~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~ 207 (480)
....+++||||+. ++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+... +.+
T Consensus 90 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 90 HADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTT
T ss_pred CCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCC
Confidence 4778999999996 5888777532 249999999999999999999999999999999999999643 456
Q ss_pred CCeeEeecccceecCCC----CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH------
Q 011647 208 SPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ------ 275 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~------ 275 (480)
+.+||+|||+++..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 248 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccccc
Confidence 78999999999876432 22345689999999998865 4899999999999999999999999765542
Q ss_pred ---HHHHHHHcCCCcCCCCCCC----------------------------------CCCHHHHHHHHHhcccCcCCCCCH
Q 011647 276 ---SIFDAILRGHIDFSSDPWP----------------------------------NISSSAKDIVKKMLHADPKERLSA 318 (480)
Q Consensus 276 ---~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~L~~dp~~R~t~ 318 (480)
+.+..+...........|. ..++++.+||.+||+.||.+|||+
T Consensus 249 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta 328 (405)
T 3rgf_A 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS 328 (405)
T ss_dssp CCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCH
T ss_pred chHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 3333332211111111111 227789999999999999999999
Q ss_pred HHHhcCCcccccCCC
Q 011647 319 AEVLNHPWMRVDGDA 333 (480)
Q Consensus 319 ~~~l~h~~~~~~~~~ 333 (480)
+|+|+||||+....+
T Consensus 329 ~e~L~hp~f~~~~~~ 343 (405)
T 3rgf_A 329 EQAMQDPYFLEDPLP 343 (405)
T ss_dssp HHHHTSGGGTSSSCC
T ss_pred HHHhcChhhccCCCC
Confidence 999999999865443
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=377.61 Aligned_cols=260 Identities=24% Similarity=0.400 Sum_probs=214.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
...++|.+.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|+.+++++. ||||+++++++....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 82 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCc
Confidence 345789999999999999999999999999999999875432 234577889999999998 999999999988665
Q ss_pred eEEEEEecCCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceeccc-CCCCCCeeEeeccc
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGL 217 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~-~~~~~~ikl~Dfg~ 217 (480)
..++||||+++++|.+++..... +++..++.++.||+.||.|||++||+||||||+|||+.. .+..+.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 78999999999999999986543 999999999999999999999999999999999999832 23456799999999
Q ss_pred ceecCCCCccccCCCCcccccccccc---------ccCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHcC
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLR---------RNYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRG 284 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~~~~ 284 (480)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||.... ..+....+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 99877666666778999999999874 457899999999999999999999996433 23444444443
Q ss_pred CCcC-------------------C--CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 285 HIDF-------------------S--SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 285 ~~~~-------------------~--~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
.+.. + ......++..+.++|.+||+.||++|||++|+|+||=
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 3210 0 0111234567889999999999999999999999873
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=395.77 Aligned_cols=250 Identities=16% Similarity=0.188 Sum_probs=204.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEE-------E
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELK-------G 135 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~-------~ 135 (480)
..++|.+.+.||+|+||+||+|.+..+|+.||||++...........+.+.+|+.+++.+. .|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 3578999999999999999999999999999999997655555566788999995554443 399999988 7
Q ss_pred EEEeCCe-----------------EEEEEecCCCCchHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHcCCee
Q 011647 136 AYEDRHS-----------------VNLIMDLCAGGELFDRIIAKGHYSE-------RAAANLCRQMVTVVHYCHSMGVMH 191 (480)
Q Consensus 136 ~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~~~~~-------~~~~~i~~qi~~~l~~lH~~~ivH 191 (480)
++.+.+. .|+||||+ +|+|.+++...+.+++ ..+..++.||+.||.|||++||+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 229 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 229 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 7766543 88999999 6799999987655655 788889999999999999999999
Q ss_pred cCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccccccccccc------------cCCCchhHHHHHHHH
Q 011647 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVIL 259 (480)
Q Consensus 192 ~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il 259 (480)
|||||+|||++ .++.+||+|||+++... ......+| +.|+|||++.+ .++.++|||||||++
T Consensus 230 rDikp~NIll~---~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 230 TYLRPVDIVLD---QRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp SCCCGGGEEEC---TTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred CCCCHHHEEEc---CCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 99999999994 56789999999998643 34456678 99999998864 489999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 260 YILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 260 ~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
|+|++|..||.+.........+. ..++.+++++.+||.+||+.||++|||+.++|+||||+.
T Consensus 304 ~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp HHHHHSSCCC------CCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred HHHHHCCCCCcccccccchhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 99999999997655433222221 123578999999999999999999999999999999973
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-48 Score=368.49 Aligned_cols=260 Identities=23% Similarity=0.295 Sum_probs=198.7
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...++|++.+.||+|+||+||+|.+..+++.||||++..... .....+.+.++...++.+. ||||+++++++.+++..
T Consensus 4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSSE
T ss_pred ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCC-CCeEEEEeeeeeccCCE
Confidence 345789999999999999999999999999999999865321 1222233444444455565 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 144 NLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
++||||++| +|.+++.. ...+++..++.++.||+.||.|||++ ||+||||||+||++ +.++.+||+|||++
T Consensus 82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGIS 157 (290)
T ss_dssp EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC---
T ss_pred EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCCc
Confidence 999999975 87776643 56799999999999999999999998 99999999999999 45678999999999
Q ss_pred eecCCCCccccCCCCcccccccccc-----ccCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcCCCcCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLR-----RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~ 292 (480)
.............||+.|+|||++. ..++.++||||||+++|+|++|..||.. ............... +..+
T Consensus 158 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~ 235 (290)
T 3fme_A 158 GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--PQLP 235 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--CCCC
T ss_pred ccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC--CCcc
Confidence 8766555445568999999999862 3478899999999999999999999976 333333333333322 1222
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
...+++++.++|.+||+.||++|||+.++++||||+...
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 346899999999999999999999999999999998653
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-48 Score=382.47 Aligned_cols=259 Identities=26% Similarity=0.387 Sum_probs=218.5
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|.+.+.||+|+||+||+|.+..+++.||+|++.... .....+.+.+|+.+++++. ||||+++++++.+++.
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 105 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE 105 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEETTE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCC-CCCEEEEeEEEEECCE
Confidence 344678999999999999999999999999999999986542 3445678999999999997 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+++||||++|++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+|||++ .++.+||+|||++...
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQL 182 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHH
T ss_pred EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCCccc
Confidence 999999999999999999888999999999999999999999996 999999999999994 5677999999998754
Q ss_pred CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--------------------
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA-------------------- 280 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~-------------------- 280 (480)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........
T Consensus 183 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 183 IDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 322 2234689999999999865 589999999999999999999999987665443222
Q ss_pred ----------------------HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 281 ----------------------ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 281 ----------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+.... .+..+...++.++.+||.+||+.||++|||+.++|+||||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp ------------CCCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccC--CCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 11111 1111223578999999999999999999999999999999854
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=379.68 Aligned_cols=252 Identities=24% Similarity=0.413 Sum_probs=215.2
Q ss_pred cccceeecceecccCCeEEEEEEEcC-------CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
..++|.+++.||+|+||+||+|.+.. ++..||||++.... .....+.+.+|+.+++++.+||||+++++++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 45789999999999999999999752 45679999986542 3445678999999999995599999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
.+.+.+|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence 99999999999999999999998653 48899999999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+.++.+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 237 ---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~ 313 (370)
T 2psq_A 237 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313 (370)
T ss_dssp ---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred ---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 456789999999998765432 2233567889999998864 58999999999999999999 999999988887
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
....+..+... .....++.++.++|.+||+.||.+|||+.+++++
T Consensus 314 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 314 LFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77777665432 1224688999999999999999999999999863
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=368.96 Aligned_cols=263 Identities=24% Similarity=0.379 Sum_probs=212.0
Q ss_pred cCCcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 58 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
.+...+....+|++.+.||+|+||+||+|.+ +++.||||++..... .....+.+.+|+.++++++ ||||+++++++
T Consensus 28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~ 103 (309)
T 3p86_A 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVLFMGAV 103 (309)
T ss_dssp ----CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred CcccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEE
Confidence 3444455668899999999999999999987 478899999875433 4455678999999999998 99999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeE
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
.+.+.+++||||+++++|.+++...+. +++..++.++.||+.||.|||++| |+||||||+|||+ +.++.+||
T Consensus 104 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL 180 (309)
T 3p86_A 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKV 180 (309)
T ss_dssp CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEE
T ss_pred EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEE
Confidence 999999999999999999999987654 999999999999999999999999 9999999999999 45678999
Q ss_pred eecccceecCCCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC
Q 011647 213 TDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (480)
Q Consensus 213 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (480)
+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.........
T Consensus 181 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (309)
T 3p86_A 181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260 (309)
T ss_dssp CCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCC
T ss_pred CCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 9999997644322 2345679999999999865 4899999999999999999999999998887777766543332222
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc--CCcccc
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN--HPWMRV 329 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~--h~~~~~ 329 (480)
...+++++.+||.+||+.||.+|||+.++++ +++++.
T Consensus 261 --~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 261 --PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred --CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2478999999999999999999999999987 455553
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=369.22 Aligned_cols=260 Identities=27% Similarity=0.540 Sum_probs=219.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-ChhcHHHHHHHHHHHHHccCCCCeeEEEEEE--EeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAY--EDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~--~~~~ 141 (480)
+.++|.+++.||+|+||.||+|.+..+++.||+|++...... .....+.+.+|+.+++++. ||||+++++++ .+..
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCC
Confidence 457899999999999999999999999999999998754321 1234578999999999998 99999999998 4556
Q ss_pred eEEEEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 142 SVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
..++||||+.++ |.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeecccccc
Confidence 899999999876 7777765 45699999999999999999999999999999999999994 56779999999998
Q ss_pred ecCCC---CccccCCCCcccccccccccc---CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 220 FFKPG---DVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 220 ~~~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
..... .......||+.|+|||++.+. ++.++||||||+++|+|++|..||.+.........+......++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---- 233 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---- 233 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----
Confidence 76432 223456799999999998642 47789999999999999999999999888888888877655443
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
..+++.+.++|.+||..||.+|||+.++++||||+.....
T Consensus 234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~ 273 (305)
T 2wtk_C 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP 273 (305)
T ss_dssp SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence 3678999999999999999999999999999999865443
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=380.66 Aligned_cols=263 Identities=26% Similarity=0.401 Sum_probs=216.8
Q ss_pred CcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC-----eeEEE
Q 011647 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-----IVELK 134 (480)
Q Consensus 60 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~-----iv~~~ 134 (480)
...+.+.++|.+.+.||+|+||+||+|.+..+++.||||++... ......+.+|+.+++.+..|++ |++++
T Consensus 47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~ 122 (382)
T 2vx3_A 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK 122 (382)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence 34456678999999999999999999999999999999998642 2345677889999988875664 99999
Q ss_pred EEEEeCCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HcCCeecCCCCcceecccCCCCCCe
Q 011647 135 GAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 135 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
+++...+.+++||||+. ++|.+++... +.+++..+..++.||+.||.||| +.||+||||||+|||++. +.++.+
T Consensus 123 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~~ 200 (382)
T 2vx3_A 123 RHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSAI 200 (382)
T ss_dssp EEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCCE
T ss_pred eeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCcE
Confidence 99999999999999996 5999998865 45999999999999999999999 579999999999999953 245679
Q ss_pred eEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+.......+
T Consensus 201 kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 278 (382)
T 2vx3_A 201 KIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278 (382)
T ss_dssp EECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred EEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999999987643 3345689999999999865 589999999999999999999999999888777666543211100
Q ss_pred ------------------CCC-----------------CCC-------------------------CCHHHHHHHHHhcc
Q 011647 290 ------------------SDP-----------------WPN-------------------------ISSSAKDIVKKMLH 309 (480)
Q Consensus 290 ------------------~~~-----------------~~~-------------------------~~~~~~~li~~~L~ 309 (480)
... ... .++++.+||.+||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 358 (382)
T 2vx3_A 279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD 358 (382)
T ss_dssp HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence 000 000 01378999999999
Q ss_pred cCcCCCCCHHHHhcCCccccc
Q 011647 310 ADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 310 ~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.||++|||+.|+|+||||+..
T Consensus 359 ~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 359 YDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp SCTTTSCCHHHHTTSGGGCC-
T ss_pred CChhhCCCHHHHhcCcccccC
Confidence 999999999999999999854
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=368.52 Aligned_cols=260 Identities=28% Similarity=0.471 Sum_probs=217.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...++|++.+.||+|+||+||+|.+..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++...+.+
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 91 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGKL 91 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-CE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCeE
Confidence 4567899999999999999999999999999999998643 2345678999999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+++++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCCcccc
Confidence 999999999999998875 4679999999999999999999999999999999999999 456779999999875422
Q ss_pred C-CCccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 223 P-GDVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 223 ~-~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
. ........||+.|+|||++. ..++.++||||||+++|+|++|..||...........+........ .....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 247 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LTPSK 247 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGGG
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CCccc
Confidence 1 11123457999999999873 3578899999999999999999999998887777766665543221 12246
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
++.++.++|.+||+.||++|||+.++++||||+...
T Consensus 248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred cCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 789999999999999999999999999999998543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=386.72 Aligned_cols=257 Identities=17% Similarity=0.189 Sum_probs=196.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc-CCCCeeEEE-------EEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-GHRNIVELK-------GAYE 138 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~hp~iv~~~-------~~~~ 138 (480)
..|.+.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.+++.+. .||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45999999999999999999999999999999998765444455677888866555554 499988855 5554
Q ss_pred eC-----------------CeEEEEEecCCCCchHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHHHcCCeecCC
Q 011647 139 DR-----------------HSVNLIMDLCAGGELFDRIIAK-GHYSERAA------ANLCRQMVTVVHYCHSMGVMHRDL 194 (480)
Q Consensus 139 ~~-----------------~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~------~~i~~qi~~~l~~lH~~~ivH~Dl 194 (480)
.. ..+|+|||||+ ++|.+++... ..+++..+ ..++.||+.||.|||++||+||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 43 33899999998 7999999764 33555555 677799999999999999999999
Q ss_pred CCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCC
Q 011647 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWG 271 (480)
Q Consensus 195 kp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~ 271 (480)
||+|||+ +.++.+||+|||+++.... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+
T Consensus 221 kp~NIll---~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 221 TPDNLFI---MPDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp SGGGEEE---CTTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CHHHEEE---CCCCCEEEEecceeeecCC--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 9999999 4567899999999987542 2224567799999999864 589999999999999999999999987
Q ss_pred CChHHH--HHH---HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 272 ETEQSI--FDA---ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 272 ~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
...... ... .......+..+.++.+++++.+||.+||+.||++|||+.++|+||||+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp CCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred cCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 643211 000 1111122233334578999999999999999999999999999999974
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=379.10 Aligned_cols=259 Identities=22% Similarity=0.299 Sum_probs=221.2
Q ss_pred ccccceeecceecccCCeEEEEEEE-----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+++.||+|+||+||+|.. ..+++.||||++... ........+.+|+.+++++. ||||+++++++.
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~ 144 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVSL 144 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCC-CCCCCeEEEEEe
Confidence 3457899999999999999999994 456789999998532 23445567889999999997 999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKG-------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
+....++|||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+..+|
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999999997653 489999999999999999999999999999999999997666667899
Q ss_pred EeecccceecCC---CCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCC
Q 011647 212 ATDFGLSVFFKP---GDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 212 l~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 286 (480)
|+|||+++.... ........||+.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+..
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~ 304 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 304 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999999975421 12223456899999999885 458999999999999999998 9999999998888888777653
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.. ....++..+.+||.+||+.||.+|||+.++++|.++-
T Consensus 305 ~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 305 MD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 22 2346899999999999999999999999999987764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=382.49 Aligned_cols=260 Identities=23% Similarity=0.452 Sum_probs=222.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhc--------------HHHHHHHHHHHHHccCCCC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD--------------VEDVRREVQIMHHLTGHRN 129 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--------------~~~~~~e~~~l~~l~~hp~ 129 (480)
...++|.+.+.||+|+||.||+|.+ +++.||||++.......... .+.+.+|+.+++++. |||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ 104 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEY 104 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTT
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCC
Confidence 3457899999999999999999999 78999999987543322211 278999999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEecCCCCchHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCccee
Q 011647 130 IVELKGAYEDRHSVNLIMDLCAGGELFDR------IIA--KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFL 200 (480)
Q Consensus 130 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~--~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil 200 (480)
|+++++++.+.+.+++||||+++++|.++ +.. ...+++..++.++.||+.||.|||+ +||+||||||+||+
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 99999999999999999999999999988 655 5679999999999999999999999 99999999999999
Q ss_pred cccCCCCCCeeEeecccceecCCCCccccCCCCcccccccccccc--CCC-chhHHHHHHHHHHHHhCCCCCCCCCh-HH
Q 011647 201 FSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGA-EADIWSAGVILYILLSGVPPFWGETE-QS 276 (480)
Q Consensus 201 ~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DiwslG~il~~lltg~~pf~~~~~-~~ 276 (480)
+ +.++.+||+|||++...... ......||+.|+|||++.+. ++. ++||||||+++|+|++|..||..... .+
T Consensus 185 ~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 185 M---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp E---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred E---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 9 45678999999999876443 44556899999999998754 445 89999999999999999999988776 77
Q ss_pred HHHHHHcCCCcCCCCC---------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 277 IFDAILRGHIDFSSDP---------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
....+..+...++... ...+++++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 7777776655554321 14689999999999999999999999999999999854
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-47 Score=372.76 Aligned_cols=264 Identities=28% Similarity=0.448 Sum_probs=217.0
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-- 140 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~-- 140 (480)
..+.++|.+.+.||+|+||+||+|.+..+|+.||||++... ........+.+|+.+++++. ||||+++++++...
T Consensus 7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 83 (353)
T 2b9h_A 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSF 83 (353)
T ss_dssp CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCS
T ss_pred cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCc-CCCcCCeeeeeccccc
Confidence 34668899999999999999999999999999999998542 23344567889999999998 99999999987654
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...++||||+. ++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 84 ~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 84 ENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGL 158 (353)
T ss_dssp TTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTT
T ss_pred CccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEeccc
Confidence 67999999996 589888765 579999999999999999999999999999999999999 4567799999999
Q ss_pred ceecCCCC-----------ccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC
Q 011647 218 SVFFKPGD-----------VFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (480)
Q Consensus 218 a~~~~~~~-----------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~ 284 (480)
+....... .....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+...
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 98764321 122357899999999874 45889999999999999999999999988766555443221
Q ss_pred C------------------------CcCCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 285 H------------------------IDFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 285 ~------------------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
. ...+.. .++.+++++.+||.+||+.||++|||+.++|+||||+......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~ 316 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence 0 000110 1246899999999999999999999999999999998765544
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=378.95 Aligned_cols=260 Identities=30% Similarity=0.466 Sum_probs=214.3
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.-.+.++|.+.+.||+|+||+||+|.+..+|+.||||++.... ......+.+.+|+.+++++. ||||+++++++...+
T Consensus 37 ~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 114 (371)
T 4exu_A 37 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPAS 114 (371)
T ss_dssp EEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCS
T ss_pred eecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcC-CCCchhhhhheeccC
Confidence 3446689999999999999999999999999999999986532 23444678899999999998 999999999998776
Q ss_pred eE------EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 142 SV------NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 142 ~~------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
.. ++||||+. ++|.+.+ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 115 ~~~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~Df 188 (371)
T 4exu_A 115 SLRNFYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDF 188 (371)
T ss_dssp SSTTCCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECST
T ss_pred CcccceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEEEec
Confidence 65 99999996 5887766 3459999999999999999999999999999999999999 45677999999
Q ss_pred ccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc------
Q 011647 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------ 287 (480)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~------ 287 (480)
|++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+......
T Consensus 189 g~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 189 GLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp TCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred Cccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 99986543 2345689999999998865 5899999999999999999999999988876666555331100
Q ss_pred -----------------CCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 288 -----------------FSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 288 -----------------~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+.. .++.+++++.+||.+||+.||++|||+.++|+||||+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence 0000 1246789999999999999999999999999999998543
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=369.68 Aligned_cols=263 Identities=25% Similarity=0.404 Sum_probs=216.6
Q ss_pred cccceeecceecccCCeEEEEEEEc-CCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEE---
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYE--- 138 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~--- 138 (480)
..++|.+.+.||+|+||+||+|.+. .+++.||+|++...... ......+.+|+.+++.+. .||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4578999999999999999999995 67899999998754321 122235667888777773 4999999999987
Q ss_pred --eCCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 139 --DRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 139 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
....+++||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEec
Confidence 5677999999997 59999988753 49999999999999999999999999999999999999 4567899999
Q ss_pred cccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-----cC
Q 011647 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-----DF 288 (480)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~-----~~ 288 (480)
||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+..... .+
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence 999987654444456789999999998864 589999999999999999999999999888777666643110 00
Q ss_pred C------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 289 S------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 289 ~------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
+ ...++.+++.+.+||.+||..||++|||+.++|+||||+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 0 0113468899999999999999999999999999999985543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-47 Score=370.78 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=216.5
Q ss_pred cccccccceeecceecccCCeEEEEEEE-cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCC------CeeEE
Q 011647 61 PMEDVRNTYIFGRELGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR------NIVEL 133 (480)
Q Consensus 61 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp------~iv~~ 133 (480)
..+.+.++|++.+.||+|+||+||+|.+ ..+++.||||++... ....+.+.+|+.+++.+. |+ +++++
T Consensus 8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~~ 82 (339)
T 1z57_A 8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLN-TTDPNSTFRCVQM 82 (339)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHH-HHCTTCTTCBCCE
T ss_pred cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhh-hcCCCCceeeEee
Confidence 4455678999999999999999999998 567899999998642 234577889999999887 54 59999
Q ss_pred EEEEEeCCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC-----
Q 011647 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE----- 206 (480)
Q Consensus 134 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~----- 206 (480)
++++...+.+++||||+ +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++..+.
T Consensus 83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence 99999999999999999 889999998765 6899999999999999999999999999999999999964321
Q ss_pred -----------CCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 011647 207 -----------DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE 274 (480)
Q Consensus 207 -----------~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~ 274 (480)
++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred CccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 56799999999987543 2345689999999999865 589999999999999999999999998877
Q ss_pred HHHHHHHHcCCCcCCC----------------------------------------CCCCCCCHHHHHHHHHhcccCcCC
Q 011647 275 QSIFDAILRGHIDFSS----------------------------------------DPWPNISSSAKDIVKKMLHADPKE 314 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~li~~~L~~dp~~ 314 (480)
.+....+.......+. ......++++.+||.+||+.||.+
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 6655444322111110 001123467889999999999999
Q ss_pred CCCHHHHhcCCccccc
Q 011647 315 RLSAAEVLNHPWMRVD 330 (480)
Q Consensus 315 R~t~~~~l~h~~~~~~ 330 (480)
|||+.|+|+||||+..
T Consensus 320 Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 320 RITLREALKHPFFDLL 335 (339)
T ss_dssp SCCHHHHTTSGGGGGG
T ss_pred ccCHHHHhcCHHHHHH
Confidence 9999999999999853
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=371.47 Aligned_cols=266 Identities=30% Similarity=0.477 Sum_probs=213.4
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE---
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--- 138 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--- 138 (480)
...+.++|.+.+.||+|+||+||+|.+..+++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 81 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSG 81 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECTTS
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcC-CCCeeEEEEeccccc
Confidence 345678999999999999999999999999999999998643 3455678899999999998 999999999873
Q ss_pred -----------eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC
Q 011647 139 -----------DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 139 -----------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
+....++||||+. ++|.+++. .+.+++..++.++.||+.||.|||++||+||||||+||+++. .+
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~ 157 (320)
T 2i6l_A 82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--ED 157 (320)
T ss_dssp CBCCC----CCSCSEEEEEEECCS-EEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--TT
T ss_pred cccccccccccccCceeEEeeccC-CCHHHHhh-cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CC
Confidence 4468899999997 59988775 467999999999999999999999999999999999999952 35
Q ss_pred CCeeEeecccceecCCC----CccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 011647 208 SPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~ 281 (480)
+.+||+|||++...... .......||+.|+|||++. ..++.++||||||+++|+|++|+.||.+.........+
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 67999999999875432 1223456799999999874 45889999999999999999999999988877666655
Q ss_pred HcCCCcC----------------------CCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 282 LRGHIDF----------------------SSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 282 ~~~~~~~----------------------~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
....... +.. ..+.++.++.+||.+||+.||++|||+.++|+||||+....+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~ 317 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMD 317 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC---
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccC
Confidence 4432110 000 12468999999999999999999999999999999987655443
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=369.30 Aligned_cols=261 Identities=28% Similarity=0.484 Sum_probs=198.3
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...++|.+.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|+.+++++. ||||+++++++...+..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 88 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDEL 88 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCC-CTTBCCEEEEEESSSCE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCCc
Confidence 345789999999999999999999998999999999864432 233567889999999997 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 144 NLIMDLCAGGELFDRIIA--------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
++||||+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEEEEec
Confidence 999999999999998874 4569999999999999999999999999999999999999 45677999999
Q ss_pred ccceecCCCC------ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc
Q 011647 216 GLSVFFKPGD------VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (480)
Q Consensus 216 g~a~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 287 (480)
|++....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||..................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 245 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 245 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC
Confidence 9987654321 1234579999999999864 5899999999999999999999999887766555544443322
Q ss_pred CC------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 288 FS------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 288 ~~------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.. ......+++++.++|.+||+.||.+|||+.++++||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 11 11235688999999999999999999999999999999854
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=364.30 Aligned_cols=258 Identities=26% Similarity=0.454 Sum_probs=215.2
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...++|.+.+.||+|+||.||+|.+..+|+.||||++.... ..+.+.+|+.+++++. ||||+++++++...+.+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 99 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDL 99 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEE
Confidence 34568999999999999999999999999999999986532 3467899999999997 99999999999999999
Q ss_pred EEEEecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+.+++|.+++. ....+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++....
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECB
T ss_pred EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccchhhh
Confidence 99999999999999886 456799999999999999999999999999999999999994 56779999999998764
Q ss_pred CCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+...... .......++..+
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 255 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-TFRKPELWSDNF 255 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSSGGGSCHHH
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCc-ccCCcccCCHHH
Confidence 332 2345679999999999865 5889999999999999999999999887776655554443221 111223578999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+||.+||..||.+|||+.++|+||||+...
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred HHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 9999999999999999999999999998553
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=368.88 Aligned_cols=250 Identities=20% Similarity=0.345 Sum_probs=213.6
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..++|.+.+.||+|+||+||+|.+..++. .||||++.... .....+.+.+|+.+++++. ||||+++++++.+.+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGR 123 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECGGG
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 45789999999999999999999986555 49999986432 3445678999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..++||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRV 200 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEE
T ss_pred ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccc
Confidence 999999999999999999754 579999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCC----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 221 FKPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 221 ~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
..... ......+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+... ....
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 277 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL---PAPM 277 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC---CCCT
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC---CCCC
Confidence 64332 1123356788999999864 58999999999999999999 99999999988888877765322 2234
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+++++.+||.+||..||.+|||+.++++
T Consensus 278 ~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 78999999999999999999999999986
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=362.12 Aligned_cols=258 Identities=26% Similarity=0.466 Sum_probs=220.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE--eCCeE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DRHSV 143 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--~~~~~ 143 (480)
.++|++.+.||+|+||+||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++. ....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceE
Confidence 4679999999999999999999999999999999975433 3445678999999999998 999999999874 46789
Q ss_pred EEEEecCCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcC-----CeecCCCCcceecccCCCCCCeeEee
Q 011647 144 NLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
++||||+++++|.+++... ..+++..++.++.||+.||.|||+.| |+||||||+||++ +.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEec
Confidence 9999999999999998753 34999999999999999999999999 9999999999999 4567799999
Q ss_pred cccceecCCCCc-cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 215 FGLSVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 215 fg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
||++........ .....||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+.... .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~ 236 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---I 236 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---C
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc---C
Confidence 999987643322 234578999999998865 58899999999999999999999999988887777777765432 1
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
...+++++.++|.+||+.||++|||+.++|+|+|+....
T Consensus 237 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 237 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 236899999999999999999999999999999998653
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=376.81 Aligned_cols=261 Identities=27% Similarity=0.366 Sum_probs=203.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe--
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS-- 142 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~-- 142 (480)
..++|.+.+.||+|+||+||+|.+..+++.||||++..... ......+++..+..+. ||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSC
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcC-CCCcccHHHhhhcccccc
Confidence 34689999999999999999999999999999998865332 2245667788888887 9999999999865433
Q ss_pred -----EEEEEecCCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH--HcCCeecCCCCcceecccCCCCCCee
Q 011647 143 -----VNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 143 -----~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
+++||||+.+ +|...+. ....+++..+..++.||+.||.||| ++||+||||||+|||++. .++.+|
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~--~~~~~k 172 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE--ADGTLK 172 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET--TTTEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC--CCCcEE
Confidence 8899999976 5544333 4567999999999999999999999 999999999999999952 366799
Q ss_pred EeecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC
Q 011647 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (480)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 289 (480)
|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+.......+
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 252 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252 (360)
T ss_dssp ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCC
Confidence 999999998766655566789999999998853 389999999999999999999999999887776666543211000
Q ss_pred ----------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 290 ----------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 290 ----------------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
.......++++.+||.+||+.||.+|||+.++|+||||+....+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 00112357889999999999999999999999999999865443
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=372.99 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=217.9
Q ss_pred cccccceeecceecccCCeEEEEEEEcCC-------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEE
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDT-------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~ 135 (480)
+...++|.+++.||+|+||+||+|.+..+ +..||||++... ......+.+.+|+++++++.+||||+++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 142 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLG 142 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence 44567899999999999999999997543 357999998654 244556789999999999955999999999
Q ss_pred EEEeCCeEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcce
Q 011647 136 AYEDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Ni 199 (480)
++...+..++||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||
T Consensus 143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 222 (382)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceE
Confidence 9999999999999999999999998754 499999999999999999999999999999999999
Q ss_pred ecccCCCCCCeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 011647 200 LFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETE 274 (480)
Q Consensus 200 l~~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~ 274 (480)
|+ +.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+...
T Consensus 223 ll---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 223 LV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp EE---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred EE---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99 456789999999998764332 2234567889999998865 58999999999999999999 9999999888
Q ss_pred HHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+....+..+.... ....+++++.+||.+||+.||++|||+.+++++
T Consensus 300 ~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 300 EELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 88887777654322 224689999999999999999999999999874
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=370.39 Aligned_cols=264 Identities=23% Similarity=0.389 Sum_probs=215.8
Q ss_pred CCcccccccceeecceecccCCeEEEEEEEcCCC-ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC------ee
Q 011647 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN------IV 131 (480)
Q Consensus 59 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~------iv 131 (480)
......+.++|.+.+.||+|+||+||+|.+..++ +.||+|++... ....+.+.+|+.+++++. |++ ++
T Consensus 11 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~ 85 (355)
T 2eu9_A 11 CRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIK-EKDKENKFLCV 85 (355)
T ss_dssp CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHH-HHCTTSCSCBC
T ss_pred cccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHh-hcCCCCceeEE
Confidence 3445567789999999999999999999998776 68999998642 234577889999999987 555 99
Q ss_pred EEEEEEEeCCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC-----
Q 011647 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS----- 204 (480)
Q Consensus 132 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~----- 204 (480)
.+++++...+.+++||||+ +++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||+...
T Consensus 86 ~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 86 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEE
T ss_pred EeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccc
Confidence 9999999999999999999 667777776653 69999999999999999999999999999999999999543
Q ss_pred -----------CCCCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 011647 205 -----------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE 272 (480)
Q Consensus 205 -----------~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~ 272 (480)
..++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 2467899999999987543 2345689999999999864 5899999999999999999999999988
Q ss_pred ChHHHHHHHHcCCCcCCCC----------------CC------------------------CCCCHHHHHHHHHhcccCc
Q 011647 273 TEQSIFDAILRGHIDFSSD----------------PW------------------------PNISSSAKDIVKKMLHADP 312 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~----------------~~------------------------~~~~~~~~~li~~~L~~dp 312 (480)
........+.......+.. .| ...+.++.+||.+||+.||
T Consensus 243 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 243 ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred CHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 7766554443321111100 00 1124578899999999999
Q ss_pred CCCCCHHHHhcCCccccc
Q 011647 313 KERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 313 ~~R~t~~~~l~h~~~~~~ 330 (480)
.+|||+.++|+||||+..
T Consensus 323 ~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 323 AQRITLAEALLHPFFAGL 340 (355)
T ss_dssp TTSCCHHHHTTSGGGGGC
T ss_pred hhCcCHHHHhcChhhcCC
Confidence 999999999999999853
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=380.30 Aligned_cols=260 Identities=23% Similarity=0.390 Sum_probs=208.0
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc-------CCCCeeEEE
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-------GHRNIVELK 134 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-------~hp~iv~~~ 134 (480)
...+.++|.+.+.||+|+||+||+|++..+++.||||++... ....+.+.+|+.+++++. +||||++++
T Consensus 32 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 32 GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 (397)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred hhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence 345668899999999999999999999999999999998643 334577889999999986 278899999
Q ss_pred EEEE----eCCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCC--
Q 011647 135 GAYE----DRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSA-- 205 (480)
Q Consensus 135 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~-- 205 (480)
+++. ....+++||||+ +++|.+.+... +.+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHH
T ss_pred cceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchh
Confidence 9987 566899999999 66777776654 4699999999999999999999998 999999999999996432
Q ss_pred --------------------------------------------CCCCeeEeecccceecCCCCccccCCCCcccccccc
Q 011647 206 --------------------------------------------EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241 (480)
Q Consensus 206 --------------------------------------------~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~ 241 (480)
....+||+|||++...... ....+||+.|+|||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChh
Confidence 1137999999999876432 345689999999998
Q ss_pred ccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHcCCCcCC------------------------C
Q 011647 242 LRR-NYGAEADIWSAGVILYILLSGVPPFWGETE------QSIFDAILRGHIDFS------------------------S 290 (480)
Q Consensus 242 ~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~------~~~~~~~~~~~~~~~------------------------~ 290 (480)
+.+ .++.++|||||||++|+|++|..||.+... ......+.......+ .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 865 489999999999999999999999976542 222222211000000 0
Q ss_pred --------------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 291 --------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 291 --------------~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
......++.+.+||.+||+.||++|||++|+|+||||+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 00012346788999999999999999999999999996
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=364.08 Aligned_cols=261 Identities=23% Similarity=0.347 Sum_probs=197.1
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
....++|.+.+.||+|+||+||+|.+..+++.||||++..... .....+.+..+..+++.+. ||||+++++++.+.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~ 98 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHD-CPYIVQCFGTFITNTD 98 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEECSSE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcC-CCceeeEEEEEecCCc
Confidence 3445789999999999999999999999999999999865432 1122233444445566665 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++||||+ ++.+..+... .+.+++..+..++.||+.||.|||++ ||+||||||+||++ +.++.+||+|||++..
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC--
T ss_pred EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchh
Confidence 99999999 5566555543 56799999999999999999999995 99999999999999 4567899999999987
Q ss_pred cCCCCccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHcCCCcCCCCCC
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
...........||+.|+|||++. ..++.++||||||+++|+|++|..||.. .........+........ +..
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~ 253 (318)
T 2dyl_A 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-PGH 253 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-CSS
T ss_pred ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-Ccc
Confidence 65554455668999999999984 3478899999999999999999999987 345555556555443222 223
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
..+++++.++|.+||+.||.+|||+.++++||||+..
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 4689999999999999999999999999999999754
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-47 Score=362.98 Aligned_cols=255 Identities=28% Similarity=0.495 Sum_probs=210.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----- 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----- 139 (480)
+.++|.+.+.||+|+||+||+|.+..+++.||||++... ....+.+.+|+.+++++. ||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLN-HQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchh
Confidence 456799999999999999999999999999999998542 244577899999999998 9999999998765
Q ss_pred --------CCeEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCe
Q 011647 140 --------RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 140 --------~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
...+++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~ 155 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV 155 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCE
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCE
Confidence 457899999999999999998654 58899999999999999999999999999999999999 456779
Q ss_pred eEeecccceecCCC---------------CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCC-
Q 011647 211 KATDFGLSVFFKPG---------------DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGE- 272 (480)
Q Consensus 211 kl~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~- 272 (480)
||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++ ||...
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999999865421 12234579999999999864 58999999999999999998 55432
Q ss_pred ChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 273 TEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
........+......++.......++.+.++|.+||+.||.+|||+.++++||||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3344555566655555555556778899999999999999999999999999999753
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=375.96 Aligned_cols=264 Identities=23% Similarity=0.377 Sum_probs=208.2
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC--------ChhcHHHHHHHHHHHHHccCCCCeeEE
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--------NRDDVEDVRREVQIMHHLTGHRNIVEL 133 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~e~~~l~~l~~hp~iv~~ 133 (480)
...+.++|.+.+.||+|+||.||+|.+.. ++.||||++...... .....+.+.+|+.+++++. ||||+++
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~ 94 (362)
T 3pg1_A 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGL 94 (362)
T ss_dssp HHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCC
T ss_pred HHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccce
Confidence 34567889999999999999999999876 899999998653321 1223478999999999998 9999999
Q ss_pred EEEEEe-----CCeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCC
Q 011647 134 KGAYED-----RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (480)
Q Consensus 134 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 207 (480)
++++.. ...+++||||+. ++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.+
T Consensus 95 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~ 170 (362)
T 3pg1_A 95 RDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADN 170 (362)
T ss_dssp SEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTT
T ss_pred eeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cCC
Confidence 999843 346899999997 5888877754 369999999999999999999999999999999999999 456
Q ss_pred CCeeEeecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC
Q 011647 208 SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 285 (480)
+.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+....
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 250 (362)
T 3pg1_A 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVV 250 (362)
T ss_dssp CCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred CCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 7799999999986655555556789999999998864 58999999999999999999999999988766665553211
Q ss_pred C------------------------cCCCC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 286 I------------------------DFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 286 ~------------------------~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
. ..+.. ..+.+++.+.+||.+||+.||++|||+.++|+||||+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 0 01111 1245688999999999999999999999999999998653
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=369.73 Aligned_cols=258 Identities=31% Similarity=0.542 Sum_probs=216.1
Q ss_pred CcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---hcHHHHHHHHHHHHHcc-CCCCeeEEEE
Q 011647 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLT-GHRNIVELKG 135 (480)
Q Consensus 60 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~-~hp~iv~~~~ 135 (480)
...+.+.++|.+.+.||+|+||+||+|.+..+++.||||++........ ...+.+.+|+.+++++. +||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 3445567889999999999999999999999999999999976543221 12245678999999997 3799999999
Q ss_pred EEEeCCeEEEEEecCCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 136 AYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
++...+..++|||++.+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. .++.+||+|
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~D 193 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLID 193 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECC
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEee
Confidence 99999999999999976 899999998889999999999999999999999999999999999999952 456799999
Q ss_pred cccceecCCCCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
||++...... ......||+.|+|||++.+. .+.++||||||+++|+|++|..||.... .+......+
T Consensus 194 fg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~---- 262 (320)
T 3a99_A 194 FGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF---- 262 (320)
T ss_dssp CTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC----
T ss_pred Cccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc----
Confidence 9999876533 33456799999999988643 4678999999999999999999996532 122332222
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
...+++++.+||.+||..||++|||++++++||||+..
T Consensus 263 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 263 RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence 24689999999999999999999999999999999854
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=370.18 Aligned_cols=258 Identities=30% Similarity=0.474 Sum_probs=212.6
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe-
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS- 142 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~- 142 (480)
.+.++|.+.+.||+|+||+||+|.+..+|+.||||++.... ......+.+.+|+.+++++. ||||+++++++.....
T Consensus 21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 98 (353)
T 3coi_A 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSL 98 (353)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSG
T ss_pred ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCcccHhheEeccccc
Confidence 35578999999999999999999999999999999986532 23444677899999999998 9999999999987654
Q ss_pred -----EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 143 -----VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 143 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
+++||||+. ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 99 ~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 99 RNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGL 172 (353)
T ss_dssp GGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEECSTTC
T ss_pred ccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEEeeccc
Confidence 499999996 58877663 359999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC----------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---------- 285 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~---------- 285 (480)
+..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+....
T Consensus 173 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 173 ARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred ccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 986532 2345689999999998864 58899999999999999999999999888766555543210
Q ss_pred -------------CcC----CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 286 -------------IDF----SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 286 -------------~~~----~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
... ....++.+++++.+||.+||+.||++|||+.++|+||||+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 000 0112356799999999999999999999999999999998543
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-47 Score=368.52 Aligned_cols=257 Identities=29% Similarity=0.544 Sum_probs=205.1
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---hcHHHHHHHHHHHHHcc---CCCCeeEEEE
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLT---GHRNIVELKG 135 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~---~hp~iv~~~~ 135 (480)
.+.+.++|++.+.||+|+||.||+|.+..+++.||||++........ .....+.+|+.++.++. +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34566789999999999999999999999999999999975433221 12234667999999983 3999999999
Q ss_pred EEEeCCeEEEEEec-CCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEee
Q 011647 136 AYEDRHSVNLIMDL-CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (480)
Q Consensus 136 ~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~D 214 (480)
++...+..++|||+ +.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++. .++.+||+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~d 183 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLID 183 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEECC
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEEEE
Confidence 99999999999999 789999999998889999999999999999999999999999999999999952 466799999
Q ss_pred cccceecCCCCccccCCCCcccccccccccc-C-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
||++...... ......||+.|+|||++.+. + +.++||||||+++|+|++|+.||.... .+......++
T Consensus 184 fg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~--- 253 (312)
T 2iwi_A 184 FGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP--- 253 (312)
T ss_dssp CSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC---
T ss_pred cchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc---
Confidence 9999876543 34556799999999988643 3 458999999999999999999996532 2223333222
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
..++.++.++|.+||+.||++|||+.++++||||+...
T Consensus 254 -~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 254 -AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291 (312)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred -ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence 46899999999999999999999999999999998653
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-47 Score=372.71 Aligned_cols=254 Identities=25% Similarity=0.377 Sum_probs=209.5
Q ss_pred ccccceeecceecccCCeEEEEEE-----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+++.||+|+||.||+|. +..+++.||||++.... .....+.+.+|+.++.++.+||||+++++++.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 346789999999999999999999 45567899999996432 33445779999999999966999999999988
Q ss_pred eCCe-EEEEEecCCCCchHHHHHhcCC-----------------------------------------------------
Q 011647 139 DRHS-VNLIMDLCAGGELFDRIIAKGH----------------------------------------------------- 164 (480)
Q Consensus 139 ~~~~-~~lv~e~~~~~~L~~~l~~~~~----------------------------------------------------- 164 (480)
+.+. +++|||||++|+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 7554 8999999999999999976543
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC---ccc
Q 011647 165 -------------YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFK 228 (480)
Q Consensus 165 -------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~---~~~ 228 (480)
+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... ...
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~ 253 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKG 253 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC-
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhcc
Confidence 89999999999999999999999999999999999994 56679999999998654332 223
Q ss_pred cCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHH
Q 011647 229 DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (480)
Q Consensus 229 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (480)
...||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.................. ....+++++.++|.+
T Consensus 254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~ 331 (359)
T 3vhe_A 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--APDYTTPEMYQTMLD 331 (359)
T ss_dssp -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC--CCTTCCHHHHHHHHH
T ss_pred ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC--CCCCCCHHHHHHHHH
Confidence 456889999999886 458999999999999999998 9999988764443333333222222 224688999999999
Q ss_pred hcccCcCCCCCHHHHhcC
Q 011647 307 MLHADPKERLSAAEVLNH 324 (480)
Q Consensus 307 ~L~~dp~~R~t~~~~l~h 324 (480)
||+.||.+|||+.++++|
T Consensus 332 ~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 332 CWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HccCChhhCCCHHHHHHH
Confidence 999999999999999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=361.11 Aligned_cols=262 Identities=26% Similarity=0.461 Sum_probs=212.3
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC-CCCeeEEEEEEEeCC
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYEDRH 141 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~~~~~~~~~~ 141 (480)
....++|.+.+.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+.++.++.. ||||+++++++...+
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 101 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 101 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC
Confidence 3445789999999999999999999864 88999999865432 44556789999999999984 699999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 102 ~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 102 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQM 176 (313)
T ss_dssp EEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCC-
T ss_pred EEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccccc
Confidence 9999999 55889999999988999999999999999999999999999999999999994 367999999999876
Q ss_pred CCCC---ccccCCCCccccccccccc------------cCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCC
Q 011647 222 KPGD---VFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGH 285 (480)
Q Consensus 222 ~~~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~ 285 (480)
.... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||..... ......+....
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 256 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcc
Confidence 4332 1234579999999998854 578899999999999999999999977543 33333444333
Q ss_pred CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
..... ....+.++.++|.+||+.||.+|||+.++|+||||+....+
T Consensus 257 ~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 302 (313)
T 3cek_A 257 HEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302 (313)
T ss_dssp SCCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred cccCC--cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence 22221 23468899999999999999999999999999999865443
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=365.75 Aligned_cols=259 Identities=24% Similarity=0.386 Sum_probs=198.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...++|.+++.||+|+||+||+|.+..++. .||||++..... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRS 97 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCC-CTTBCCCCEEEECC
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCC-CCceehhhceeecc
Confidence 345789999999999999999999887765 899999865432 3345678999999999997 99999999999877
Q ss_pred CeE------EEEEecCCCCchHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC
Q 011647 141 HSV------NLIMDLCAGGELFDRIIAKG------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 141 ~~~------~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
... ++||||+.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+ +.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli---~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---cCCC
Confidence 665 99999999999999886543 59999999999999999999999999999999999999 4567
Q ss_pred CeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHc
Q 011647 209 PLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~ 283 (480)
.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~ 254 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc
Confidence 899999999987644332 223456788999999865 48999999999999999999 9999999888887777766
Q ss_pred CCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCC-------HHHHhcCCccccc
Q 011647 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS-------AAEVLNHPWMRVD 330 (480)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-------~~~~l~h~~~~~~ 330 (480)
+.... ..+.+++++.+||.+||+.||++||| ++++++|||+...
T Consensus 255 ~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 255 GNRLK---QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp TCCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred CCCCC---CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 54322 23578999999999999999999999 7888899999754
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=360.46 Aligned_cols=253 Identities=25% Similarity=0.360 Sum_probs=207.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.+++++. ||||+++++++..++.+++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCeEEE
Confidence 467999999999999999999999999999999997655444555678999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCccCccccccc
Confidence 999999999999999888999999999999999999999999999999999999994 56779999999987654332
Q ss_pred --ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 226 --VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+. .....+....+.+|+++.+
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 267 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN-QAIPRPSTVRPGIPVAFDA 267 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH-SCCCCGGGTSTTCCTHHHH
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc-cCCCCccccCCCCCHHHHH
Confidence 2234579999999998864 58899999999999999999999998876654444333 3333333344678999999
Q ss_pred HHHHhcccCcCCCC-CHHHHhc
Q 011647 303 IVKKMLHADPKERL-SAAEVLN 323 (480)
Q Consensus 303 li~~~L~~dp~~R~-t~~~~l~ 323 (480)
+|.+||..||++|| +++++++
T Consensus 268 li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 268 VIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHhccCCHHHHHHhHHHHHH
Confidence 99999999999999 7777764
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=358.16 Aligned_cols=255 Identities=26% Similarity=0.454 Sum_probs=207.5
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
|.....||+|+||+||+|.+..+++.||||++.... ....+.+.+|+.+++.+. ||||+++++++...+..++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCcEEEEEE
Confidence 444458999999999999999999999999986542 334577899999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 149 LCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++. .++.+||+|||++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccccccCCCC
Confidence 999999999987652 4679999999999999999999999999999999999953 25679999999998764322
Q ss_pred -ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 226 -VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||....... ........ .........+++++
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 255 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF--KVHPEIPESMSAEA 255 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH--CCCCCCCTTSCHHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc--cccccccccCCHHH
Confidence 2345679999999999864 37889999999999999999999997644322 11111111 11122234689999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.++|.+||+.||++|||+.++|+||||+...
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999999999998653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-46 Score=350.85 Aligned_cols=248 Identities=23% Similarity=0.401 Sum_probs=214.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||+||+|.+.. +..||+|++..... ..+.+.+|+.++.++. ||||+++++++.+.+..+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 79 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIY 79 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTB----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred chhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCC----cHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceE
Confidence 45789999999999999999998874 67899999865432 3467899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecch
Confidence 9999999999999997754 49999999999999999999999999999999999999 4567899999999987654
Q ss_pred CCcc--ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GDVF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.... ....||+.|+|||++.+ .++.++||||||+++|+|++ |..||...........+......... ..+++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLASDT 233 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcChHH
Confidence 3321 23456778999999865 58899999999999999999 99999998888887777665543322 357899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.++|.+||+.||.+|||+.++++|
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999975
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=365.01 Aligned_cols=245 Identities=25% Similarity=0.424 Sum_probs=206.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+++.||+|+||+||+|.+..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEE
Confidence 36799999999999999999999999999999988532 4456678999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+++++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC--
T ss_pred EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccc
Confidence 9999999999999987 5679999999999999999999999999999999999999 45677999999999876432
Q ss_pred Ccc---------------ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHc
Q 011647 225 DVF---------------KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQS-----IFDAILR 283 (480)
Q Consensus 225 ~~~---------------~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-----~~~~~~~ 283 (480)
... ....||+.|+|||++.+ .++.++||||||+++|+|++|..||....... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 211 14579999999999875 58999999999999999999999986532210 0111111
Q ss_pred CCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.. ..+.+++.+.++|.+||+.||++|||+.++++
T Consensus 242 ~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 242 RY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11 12467889999999999999999999999976
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=364.96 Aligned_cols=259 Identities=22% Similarity=0.312 Sum_probs=216.9
Q ss_pred ccccceeecceecccCCeEEEEEE-----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+.+.||+|+||+||+|. +..+++.||||++... ........+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 103 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVSL 103 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCC-CCCCCeEEEEEc
Confidence 445789999999999999999999 5567889999998632 23445567899999999997 999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCee
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKG-------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
.....++||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..+.+..+|
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999999998753 489999999999999999999999999999999999997655677899
Q ss_pred EeecccceecCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCC
Q 011647 212 ATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 212 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 286 (480)
|+|||++....... ......||+.|+|||++. +.++.++||||||+++|+|++ |..||...........+..+..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 263 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 263 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC
Confidence 99999987543222 223456889999999885 458999999999999999998 9999998888887777766543
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
.. ....+++.+.++|.+||+.||.+|||+.++++|.|+-
T Consensus 264 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 264 MD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 22 2346899999999999999999999999999998874
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=354.80 Aligned_cols=248 Identities=24% Similarity=0.404 Sum_probs=211.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||+||+|.+. ++..||+|++..... ..+.+.+|+.+++++. ||||+++++++.+.+.++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 95 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIF 95 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeE
Confidence 3468999999999999999999887 467899999875432 2367899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCC
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEccccccccccc
Confidence 99999999999999976 5679999999999999999999999999999999999999 4567899999999986543
Q ss_pred CC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.. ......||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+........ ...+++.
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 249 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEK 249 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHH
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---CCcCCHH
Confidence 21 122345678899999986 458999999999999999998 9999999888888877776543322 2457899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.++|.+||+.||.+|||+.++++|
T Consensus 250 l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 250 VYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999999875
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-46 Score=352.22 Aligned_cols=247 Identities=24% Similarity=0.449 Sum_probs=213.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||+||+|.+.. ++.||+|++..... ..+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 82 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICL 82 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred hhhceeeheecCCCccEEEEEEecC-CCeEEEEEeccccc----CHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEE
Confidence 3679999999999999999999874 67899999875432 3367899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+++++|.+++... +.+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEecccccccccccc
Confidence 99999999999999754 4599999999999999999999999999999999999994 4667999999999865432
Q ss_pred C--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 225 D--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
. ......||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+........ ...+++++
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 236 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV 236 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHHH
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC---CCcCCHHH
Confidence 2 123345778899999986 458999999999999999999 9999999988888888776533222 24578999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+++.+||+.||++|||+.++++|
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999999999999999875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-46 Score=350.94 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=203.2
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC-hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
.++|.+.+.||+|+||+||+|.+. +..||||++....... ....+.+.+|+.+++.++ ||||+++++++.+++..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLC 82 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceE
Confidence 467999999999999999999985 7889999986543222 334578999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC---CeecCCCCcceecccCC-----CCCCeeEeecc
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG---VMHRDLKPENFLFSSSA-----EDSPLKATDFG 216 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~-----~~~~ikl~Dfg 216 (480)
+||||+++++|.+++. .+.+++..++.++.|++.||.|||++| |+||||||+||+++... .++.+||+|||
T Consensus 83 lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999988774 568999999999999999999999999 89999999999996422 26779999999
Q ss_pred cceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
++....... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+.......+. ...
T Consensus 162 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 238 (271)
T 3dtc_A 162 LAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PST 238 (271)
T ss_dssp C--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC--CTT
T ss_pred ccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC--Ccc
Confidence 998654332 234579999999998865 4899999999999999999999999998887777766665544332 257
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+++.+.++|.+||+.||.+|||+.++++|
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 89999999999999999999999999874
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=365.07 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=207.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.++|.+.+.||+|+||+||+|.+..+++.||||++..... .+.+.+|+.+++++.+||||+++++++...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 45789999999999999999999999999999999864422 2457899999999955999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC--CCCeeEeecccceec
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE--DSPLKATDFGLSVFF 221 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--~~~ikl~Dfg~a~~~ 221 (480)
+||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++. ...+||+|||++...
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999999 9999999886 467999999999999999999999999999999999999964321 123999999999876
Q ss_pred CCCCc--------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHcCCCcCC
Q 011647 222 KPGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFS 289 (480)
Q Consensus 222 ~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~ 289 (480)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ..+.+..+.......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP 240 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence 43322 245689999999999875 48999999999999999999999998743 3344444433332222
Q ss_pred CCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 290 SDP-WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 290 ~~~-~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
... ...+| ++.++|.+||..||.+||++.++++
T Consensus 241 ~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 241 IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 111 12344 9999999999999999999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=366.80 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=216.1
Q ss_pred cccccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
....++|.+.+.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|+.+++++. ||||+++++++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~ 119 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVC 119 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE
Confidence 3456789999999999999999999973 45889999986532 3445678999999999997 99999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecC
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAK------------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D 193 (480)
.+.+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|||
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D 199 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 199 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 9999999999999999999999764 5699999999999999999999999999999
Q ss_pred CCCcceecccCCCCCCeeEeecccceecCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCC
Q 011647 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPP 268 (480)
Q Consensus 194 lkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~p 268 (480)
|||+|||++ .++.+||+|||++....... ......||+.|+|||++. ..++.++||||||+++|+|++ |..|
T Consensus 200 lkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 200 LATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCcceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 999999994 56679999999997653221 223456889999999886 458999999999999999999 9999
Q ss_pred CCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
|.+....+....+..+.... ....+++++.++|.+||+.||++|||+.++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~ 328 (343)
T 1luf_A 277 YYGMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328 (343)
T ss_dssp TTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99988888888777665432 22468899999999999999999999999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=365.01 Aligned_cols=260 Identities=23% Similarity=0.338 Sum_probs=190.8
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||.||+|.++.+++.||||++.... .......+.+|+..+.+..+||||+++++++...+..+
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 4578999999999999999999999999999999986532 23344556667764444334999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 145 LIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
+||||+.+ +|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+||+++ .++.+||+|||++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGIS 173 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTTEEEECCCSSS
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCCCEEEccCCCc
Confidence 99999975 88777753 56799999999999999999999999 999999999999994 5677999999999
Q ss_pred eecCCCCccccCCCCcccccccccc-----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCC-CcCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLR-----RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGH-IDFSSD 291 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~-~~~~~~ 291 (480)
.............||+.|+|||++. ..++.++||||||+++|+|++|..||.+.... +....+..+. ..++..
T Consensus 174 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3aln_A 174 GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253 (327)
T ss_dssp CC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred eecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence 8765544444557999999999983 34889999999999999999999999764321 2221122211 122222
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 292 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
....+++.+.+||.+||+.||++|||+.++++||||...
T Consensus 254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 335689999999999999999999999999999999754
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=360.22 Aligned_cols=252 Identities=23% Similarity=0.366 Sum_probs=215.7
Q ss_pred ccccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+.+.||+|+||.||+|.+. .+++.||||++.... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~ 96 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVN-HPHVIKLYGACS 96 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCceeeEEEEEe
Confidence 34578999999999999999999983 445889999986432 4455678999999999997 999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCC
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGH------------------------YSERAAANLCRQMVTVVHYCHSMGVMHRDL 194 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~------------------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl 194 (480)
+.+..++||||+++++|.+++..... +++..++.++.||+.||.|||++||+||||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di 176 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDL 176 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccccc
Confidence 99999999999999999999987543 899999999999999999999999999999
Q ss_pred CCcceecccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCC
Q 011647 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPF 269 (480)
Q Consensus 195 kp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf 269 (480)
||+||+++ .++.+||+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|++ |..||
T Consensus 177 kp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 177 AARNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp SGGGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred chheEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999995 466799999999987644332 223467889999998864 48999999999999999999 99999
Q ss_pred CCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+.........+...... .....+++++.++|.+||+.||++|||+.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 254 PGIPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp TTCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 988887777776665422 2235789999999999999999999999999874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=356.19 Aligned_cols=253 Identities=26% Similarity=0.482 Sum_probs=202.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCcEE
Confidence 3467999999999999999999999999999999997655555666788999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 145 LIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+||||+.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~~~ 185 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRF 185 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC-----
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEeccceee
Confidence 99999999999998864 4569999999999999999999999999999999999999 4567899999999886
Q ss_pred cCCCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ......|++.|+|||++.+ .++.++||||||+++|+|++|..||.+.. .......+..... +......+
T Consensus 186 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 263 (310)
T 2wqm_A 186 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSDHY 263 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS--CCCCTTTS
T ss_pred ecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC--CCCccccc
Confidence 54322 2234579999999998864 58899999999999999999999997643 3344444444332 22233578
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++++.++|.+||..||.+|||+.++++
T Consensus 264 ~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 264 SEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999999999999999999999976
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=352.40 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=207.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhc----HHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD----VEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
..++|.+.+.||+|+||+||+|.+..+++.||+|++.......... .+.+.+|+.+++++. ||||+++++++.+.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNP 95 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC-CTTBCCEEEEETTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC-CCCchhhheeecCC
Confidence 3468999999999999999999999999999999986543322221 267899999999998 99999999998665
Q ss_pred CeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCC--CCCeeEeec
Q 011647 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAE--DSPLKATDF 215 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~--~~~ikl~Df 215 (480)
. ++||||+++++|.+.+... ..+++..+..++.|++.||.|||++| |+||||||+|||++..+. ...+||+||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 5 6999999999999888754 46999999999999999999999999 999999999999964321 224899999
Q ss_pred ccceecCCCCccccCCCCcccccccccc---ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHcCCCcCCC
Q 011647 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSI--FDAILRGHIDFSS 290 (480)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~~~~~~~~~~ 290 (480)
|++.... .......||+.|+|||++. ..++.++|||||||++|+|++|..||........ ...+...... .
T Consensus 174 g~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~ 249 (287)
T 4f0f_A 174 GLSQQSV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--P 249 (287)
T ss_dssp TTCBCCS--SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC--C
T ss_pred Ccccccc--ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC--C
Confidence 9998543 2345578999999999983 3478899999999999999999999987654333 3333333322 2
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+++++.++|.+||+.||.+|||+.++++
T Consensus 250 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 223578999999999999999999999999985
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=368.25 Aligned_cols=250 Identities=23% Similarity=0.386 Sum_probs=213.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+.+.||+|+||+||+|.+..+++.||||++... ......+.+.+|+.+++++. ||||+++++++...+.++
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCC-CTTBCCEEEEECSSSSCE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEecCCCcE
Confidence 457899999999999999999999999999999998643 23344567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCC
Confidence 9999999999999997654 59999999999999999999999999999999999999 4567899999999986543
Q ss_pred CCcc---ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 224 GDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 224 ~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... ....+++.|+|||++. +.++.++|||||||++|||++ |..||.+.........+..+... + ....+++
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 342 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-P--CPELCPD 342 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC-C--CCTTCCH
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-C--CCCCCCH
Confidence 2211 1123567899999986 458899999999999999998 99999998887777766654321 1 2246789
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+||.+||+.||++|||+.++++
T Consensus 343 ~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 343 AVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999999975
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=352.58 Aligned_cols=251 Identities=26% Similarity=0.372 Sum_probs=202.3
Q ss_pred cccccceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
+...++|.+.+.||+|+||+||+|.+..+ +..||+|.+... ......+.+.+|+.+++++. ||||+++++++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~- 86 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT- 86 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCC-CCccceEEEEEc-
Confidence 34567899999999999999999998654 456999988643 23445678999999999998 999999999984
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
++..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLS 163 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC----
T ss_pred cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC---CCCCEEECccccc
Confidence 567899999999999999997654 699999999999999999999999999999999999995 4567999999999
Q ss_pred eecCCCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 219 VFFKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 219 ~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
........ .....+|+.|+|||++. ..++.++||||||+++|+|++ |..||.+....+....+..+... ...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~ 240 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPP 240 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCT
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCC
Confidence 87644322 22345778999999986 458899999999999999996 99999988887777777665432 1235
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+++++.++|.+||+.||++|||+.++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 78999999999999999999999999975
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=358.23 Aligned_cols=255 Identities=22% Similarity=0.358 Sum_probs=216.9
Q ss_pred cccccccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEE
Q 011647 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (480)
Q Consensus 61 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~ 135 (480)
..+...++|.+.+.||+|+||+||+|.+. .+++.||||++.... .......+.+|+.+++++. ||||+++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~ 95 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLG 95 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcC-CCCEeeeEE
Confidence 34455678999999999999999999886 357889999986432 3344567899999999998 999999999
Q ss_pred EEEeCCeEEEEEecCCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 136 AYEDRHSVNLIMDLCAGGELFDRIIAK----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
++.+.+..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli---~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---A 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---C
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE---c
Confidence 999999999999999999999988653 457999999999999999999999999999999999999 4
Q ss_pred CCCCeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 280 (480)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 252 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 252 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH
Confidence 56789999999998654322 1223467889999999864 58999999999999999999 8999999888888777
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+..+.... ....++..+.++|.+||+.||.+|||+.++++|
T Consensus 253 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 253 VMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 76654322 224789999999999999999999999999976
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=353.85 Aligned_cols=255 Identities=22% Similarity=0.302 Sum_probs=211.6
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+.++|.+.+.||+|+||+||+|.+..+++.||||++.... ..+.+.+|+.+++++.+|+|++++++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 345678999999999999999999999999999999986432 224578899999999779999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeecccce
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSV 219 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~a~ 219 (480)
.++||||+ +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++.
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999999 999999998754 599999999999999999999999999999999999996432 23459999999998
Q ss_pred ecCCCCc--------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHcCCCc
Q 011647 220 FFKPGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHID 287 (480)
Q Consensus 220 ~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~ 287 (480)
....... .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||.+.. .......+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 7654321 245679999999999865 48999999999999999999999998743 33444443332221
Q ss_pred CC-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 288 FS-SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 288 ~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+ ....+.+|+++.++|.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 11 1112468999999999999999999999999975
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=363.02 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=210.9
Q ss_pred ccccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+++.||+|+||+||+|.+. .++..||||++.... .....+.+.+|+.++.++.+||||+++++++.
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34578999999999999999999973 456789999987432 23345789999999999955999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCC
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKG-----------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLK 195 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk 195 (480)
..+..++||||+++++|.+++.... .+++..++.++.||+.||.|||++||+|||||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik 199 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 199 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 9999999999999999999997653 37999999999999999999999999999999
Q ss_pred CcceecccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCC
Q 011647 196 PENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFW 270 (480)
Q Consensus 196 p~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~ 270 (480)
|+|||++ .++.+||+|||++........ .....||+.|+|||++. +.++.++||||||+++|+|++ |..||.
T Consensus 200 p~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 200 ARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp GGGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred hhhEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 9999994 566799999999986643322 22345788999999885 458999999999999999998 999998
Q ss_pred CCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
+.........+......... ...+++++.+||.+||..||.+|||+.++++|-.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 277 GIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp TCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 87655544444443332222 2467999999999999999999999999998644
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=357.34 Aligned_cols=252 Identities=24% Similarity=0.405 Sum_probs=214.3
Q ss_pred cccceeecceecccCCeEEEEEEEc-------CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-------DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
..++|.+++.||+|+||+||+|.+. .++..||||++.... .....+.+.+|+.+++++.+||||+++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 3578999999999999999999986 356789999986432 3445678999999999995599999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
...+.+++||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 99999999999999999999998654 38999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+.++.+||+|||++........ .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+....+
T Consensus 191 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 267 (334)
T 2pvf_A 191 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267 (334)
T ss_dssp ---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred ---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence 4567899999999987654332 233467889999998864 58899999999999999999 999999988888
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
....+..+.... ....++.++.++|.+||+.||.+|||+.+++++
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 268 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 777776654321 224689999999999999999999999999864
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=361.14 Aligned_cols=250 Identities=26% Similarity=0.373 Sum_probs=210.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceE--EEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~v--avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
++|.+.+.||+|+||.||+|.+..++..+ |+|.+... ......+.+.+|+.+++++.+||||+++++++.+.+.++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 67999999999999999999999888765 99988642 233445678999999999955999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC
Q 011647 145 LIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---CCC
Confidence 9999999999999997654 699999999999999999999999999999999999994 566
Q ss_pred CeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCC
Q 011647 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 286 (480)
.+||+|||++.............+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+..
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 799999999975433223334567889999999865 47899999999999999998 9999999888877776665422
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
......+++++.+||.+||..||.+|||+.+++++
T Consensus 260 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp ---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12234689999999999999999999999999875
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=356.62 Aligned_cols=254 Identities=26% Similarity=0.376 Sum_probs=212.2
Q ss_pred ccccceeecceecccCCeEEEEEEE-----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+++.||+|+||+||+|.+ ..+++.||||++.... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 3457899999999999999999985 4567899999986542 33456789999999999955999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCccee
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKG------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil 200 (480)
.++..++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence 9999999999999999999997654 4899999999999999999999999999999999999
Q ss_pred cccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 011647 201 FSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ 275 (480)
Q Consensus 201 ~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~ 275 (480)
++ .++.+||+|||++........ .....||+.|+|||++. ..++.++||||||+++|+|++ |..||.+....
T Consensus 178 ~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 178 LT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp EE---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred Ec---CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 94 567799999999987654332 22345788999999875 458999999999999999999 99999887654
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.............. ....+++++.++|.+||..||.+|||+.+++++
T Consensus 255 ~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 255 SKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 44444333332222 224689999999999999999999999999863
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=350.33 Aligned_cols=250 Identities=23% Similarity=0.390 Sum_probs=215.8
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+....+|.+.+.||+|+||+||+|.+..++..||+|++... ....+.+.+|+.++++++ ||||+++++++.+.+.
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 83 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP 83 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC
Confidence 34567899999999999999999999999999999998643 234578999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++||||+.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCGGGT
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCcccee
Confidence 99999999999999999874 3499999999999999999999999999999999999994 566799999999987
Q ss_pred cCCCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
...... .....||+.|+|||++. ..++.++||||||+++|+|++ |..||.+.........+...... .....+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 237 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERPEGC 237 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTTC
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC---CCCCCC
Confidence 653332 22345788899999886 458999999999999999999 99999988877777666554322 223578
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+.+||.+||..||.+|||+.++++
T Consensus 238 ~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 238 PEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 999999999999999999999999965
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-46 Score=368.78 Aligned_cols=260 Identities=22% Similarity=0.427 Sum_probs=206.7
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC----------CCCeeEEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG----------HRNIVELKG 135 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~----------hp~iv~~~~ 135 (480)
.++|.+.+.||+|+||+||+|.+..+++.||||++... ....+.+.+|+.+++++.. ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 46899999999999999999999999999999998643 2344678899999988762 789999999
Q ss_pred EEEeCC----eEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCcceecccC---C
Q 011647 136 AYEDRH----SVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSS---A 205 (480)
Q Consensus 136 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~---~ 205 (480)
++...+ .+++||||+ +++|.+++... +.+++..+..++.||+.||.|||++ ||+||||||+|||++.. +
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 987654 789999999 88999999763 4599999999999999999999998 99999999999999642 2
Q ss_pred CCCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh------HHHH
Q 011647 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE------QSIF 278 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~------~~~~ 278 (480)
..+.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 334799999999987643 2345689999999999865 489999999999999999999999976542 2222
Q ss_pred HHHHcCCCcCC--------------------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 011647 279 DAILRGHIDFS--------------------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAE 320 (480)
Q Consensus 279 ~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~ 320 (480)
..+.......+ ......+++++.+||.+||+.||++|||+.+
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 22211000000 0001134578899999999999999999999
Q ss_pred HhcCCcccccCC
Q 011647 321 VLNHPWMRVDGD 332 (480)
Q Consensus 321 ~l~h~~~~~~~~ 332 (480)
+|+||||+....
T Consensus 331 ll~hp~f~~~~~ 342 (373)
T 1q8y_A 331 LVNHPWLKDTLG 342 (373)
T ss_dssp HHTCGGGTTCTT
T ss_pred HhhChhhhcccC
Confidence 999999986543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=358.58 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=203.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceE----EEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF----ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.++|++.+.||+|+||+||+|.+..+++.+ |+|.+.... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC
Confidence 467999999999999999999998777654 777764322 3345578999999999998 999999999998754
Q ss_pred eEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.++|+||+.+|+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC---CCCCEEEccCcceeE
Confidence 7899999999999999987 45699999999999999999999999999999999999995 466799999999987
Q ss_pred cCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 221 FKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 221 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..+.... ..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 243 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI 243 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC---CCcc
Confidence 643322 223457889999998864 58999999999999999999 999999888777776666544221 2246
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
++.++.+++.+||+.||.+|||+.+++++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 88999999999999999999999999874
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=371.86 Aligned_cols=257 Identities=24% Similarity=0.406 Sum_probs=210.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
...++|.+.+.||+|+||+||+|.+..+++.||||++..... ....+.+.+|++++++++ ||||+++++++...+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 82 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCC
Confidence 456789999999999999999999999999999999875432 234577889999999998 999999999998765
Q ss_pred eEEEEEecCCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceeccc-CCCCCCeeEeeccc
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGL 217 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~-~~~~~~ikl~Dfg~ 217 (480)
..++|||||++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+.. .+..+.+||+|||+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 7899999999999999987543 3999999999999999999999999999999999999832 23455699999999
Q ss_pred ceecCCCCccccCCCCcccccccccc---------ccCCCchhHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHcC
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLR---------RNYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILRG 284 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~~lltg~~pf~~~----~~~~~~~~~~~~ 284 (480)
++............||+.|+|||++. ..++.++|||||||++|+|++|..||... ...+.+..+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 99876655556678999999999875 34678999999999999999999999642 234555555554
Q ss_pred CCcCC---------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 285 HIDFS---------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 285 ~~~~~---------------------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..... ......++..+.++|.+||..||++|||+.++++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 32110 0001124567889999999999999999999854
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=353.16 Aligned_cols=250 Identities=22% Similarity=0.364 Sum_probs=201.9
Q ss_pred ccccceeecceecccCCeEEEEEE----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
...++|++.+.||+|+||+||+|+ +..+++.||||++... .....+.+.+|+.+++++. ||||+++++++..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 82 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYS 82 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECH
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec
Confidence 345789999999999999999998 5668899999998643 3455678999999999998 9999999999854
Q ss_pred --CCeEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg 159 (295)
T 3ugc_A 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFG 159 (295)
T ss_dssp HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCC
T ss_pred CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc---CCCeEEEccCc
Confidence 456899999999999999998754 499999999999999999999999999999999999995 45679999999
Q ss_pred cceecCCCC----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH----------------
Q 011647 217 LSVFFKPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------------- 275 (480)
Q Consensus 217 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~---------------- 275 (480)
++....... ......|++.|+|||++.+ .++.++||||||+++|+|++|..||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 998764332 1223457788999998864 5899999999999999999999998643221
Q ss_pred HHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+.... . .+....+++++.++|.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~-~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 240 HLIELLKNNG-R--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHHHTTC-C--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhccC-c--CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1122222221 1 1223578999999999999999999999999975
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-46 Score=374.02 Aligned_cols=254 Identities=27% Similarity=0.381 Sum_probs=197.8
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.+|.+.+.||+|+||+||. ....+++.||||++..... ..+.+|+.+++++.+|||||++++++.+....|+|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 4699999999999999764 3445789999999864322 23568999999995699999999999999999999
Q ss_pred EecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeecccceecCC
Q 011647 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~a~~~~~ 223 (480)
||||. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++..+ ....+||+|||+++....
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 99995 59999987654 466667789999999999999999999999999999996433 234577999999987653
Q ss_pred CC----ccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 224 GD----VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 224 ~~----~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
.. .....+||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+...... ...+..
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~ 254 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD-CLHPEK 254 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCT-TSCTTC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCcc-ccCccc
Confidence 32 234567999999999986 346779999999999999999 99999665544332222111111 111122
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
..+..+.+||.+||+.||.+|||+.++++||||..
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 34566899999999999999999999999999963
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=363.99 Aligned_cols=250 Identities=21% Similarity=0.378 Sum_probs=202.6
Q ss_pred cccceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
...+|.+.+.||+|+||+||+|++. .++..||||++.... .....+.+.+|+.+++++. ||||+++++++.+.+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 119 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSK 119 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSS
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCC
Confidence 3468999999999999999999987 457789999986432 3445678999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRV 196 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-----
T ss_pred ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCccccc
Confidence 9999999999999999998754 69999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCc----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 221 FKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 221 ~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
...... .....+++.|+|||++. +.++.++||||||+++|+|++ |..||...........+..+... +...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~ 273 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM 273 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC---CCCT
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCc
Confidence 643221 12234577899999986 458999999999999999998 99999998888887777655321 1224
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.++..+.++|.+||+.||.+||++.++++
T Consensus 274 ~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp TCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 68899999999999999999999999975
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=347.48 Aligned_cols=247 Identities=32% Similarity=0.656 Sum_probs=199.1
Q ss_pred ccccceeec-ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe---
Q 011647 64 DVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (480)
Q Consensus 64 ~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--- 139 (480)
.+.++|.+. +.||+|+||+||+|.+..+++.||||++... ..+.+|+.++.++..||||+++++++..
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 345668777 7899999999999999999999999998532 4677899998666669999999999877
Q ss_pred -CCeEEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 140 -RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 140 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...+++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 778999999999999999998764 69999999999999999999999999999999999999765557889999999
Q ss_pred cceecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----cCCCcCCCCC
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL----RGHIDFSSDP 292 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~----~~~~~~~~~~ 292 (480)
++..... ..++.++|||||||++|+|++|..||.+........... .....++...
T Consensus 166 ~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 3m2w_A 166 FAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 225 (299)
T ss_dssp TCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred ccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence 9875431 236778999999999999999999997765543321111 1111222212
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~ 338 (480)
+..+++++.+||.+||+.||++|||+.++|+||||+........+.
T Consensus 226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~~ 271 (299)
T 3m2w_A 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271 (299)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCBC
T ss_pred cccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCCC
Confidence 2468999999999999999999999999999999986654444333
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=360.74 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=207.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCce----EEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.++|++.+.||+|+||+||+|.+..+++. ||+|.+.... .......+.+|+.+++++. ||||+++++++. ++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCC-CTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEc-CC
Confidence 46799999999999999999999888776 6777664322 2223356778999999998 999999999986 56
Q ss_pred eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..++||||+.+++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcccc
Confidence 689999999999999999764 579999999999999999999999999999999999999 4567799999999987
Q ss_pred cCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 221 FKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 221 ~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... ......||+.|+|||++. +.++.++|||||||++|+|++ |..||.+.........+..+..... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 241 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ---PQI 241 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC---CTT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC---CCc
Confidence 64332 234456888999999986 458999999999999999999 9999998887777777766543222 235
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
++.++.++|.+||..||.+|||+.++++|
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77889999999999999999999999886
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=371.55 Aligned_cols=256 Identities=27% Similarity=0.420 Sum_probs=199.5
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.+.|.+.+.||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.++.++.+||||+++++++.+++.+
T Consensus 12 ~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 84 (434)
T 2rio_A 12 SLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFL 84 (434)
T ss_dssp SCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred hhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeE
Confidence 345678888999999999998754 456899999998542 2356789999999885699999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCC-------HHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC----------CC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYS-------ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AE 206 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~-------~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~----------~~ 206 (480)
++|||||. |+|.+++...+... +..++.++.||+.||.|||++||+||||||+|||++.. +.
T Consensus 85 ~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 85 YIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp EEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCC
Confidence 99999995 59999997654432 33457899999999999999999999999999999643 24
Q ss_pred CCCeeEeecccceecCCCCc-----cccCCCCccccccccccc--------cCCCchhHHHHHHHHHHHHh-CCCCCCCC
Q 011647 207 DSPLKATDFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGE 272 (480)
Q Consensus 207 ~~~ikl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~llt-g~~pf~~~ 272 (480)
+..+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||...
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 56799999999987654321 234579999999998853 47889999999999999999 99999765
Q ss_pred ChHHHHHHHHcCCCcCCCCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 273 TEQSIFDAILRGHIDFSSDP---WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.... ..+..+....+... ...+++++.+||.+||+.||.+|||+.++++||||..
T Consensus 244 ~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 244 YSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp TTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred hhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 5443 23444443332211 1234688999999999999999999999999999963
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=361.82 Aligned_cols=256 Identities=22% Similarity=0.354 Sum_probs=207.0
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.....++|.+.+.||+|+||+||+|.+. +++.||||++... .....+.+.+|+.++++++ ||||+++++++...+
T Consensus 34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 34 LEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE---SSQGIEEFETEIETLSFCR-HPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCC-CTTBCCEEEECCCTT
T ss_pred HHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCC
Confidence 3445678999999999999999999975 5889999987653 2345678999999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 142 SVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
..++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeeccc
Confidence 9999999999999999886543 58999999999999999999999999999999999999 4577899999999
Q ss_pred ceecCCC---CccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH-------HHHHcCCC
Q 011647 218 SVFFKPG---DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIF-------DAILRGHI 286 (480)
Q Consensus 218 a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~-------~~~~~~~~ 286 (480)
+...... .......||+.|+|||++. +.++.++||||||+++|+|++|+.||.+....... ........
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 9865322 1223456899999999885 46899999999999999999999999765432211 11111111
Q ss_pred c------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCC
Q 011647 287 D------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (480)
Q Consensus 287 ~------~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~ 325 (480)
. ......+..+..+.+++.+||+.||++|||+.++++|-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1 00111123456789999999999999999999999764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=352.51 Aligned_cols=248 Identities=18% Similarity=0.297 Sum_probs=204.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCC-------ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTK-------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
..++|.+.+.||+|+||+||+|.+..++ ..||+|++... .....+.+.+|+.+++++. ||||+++++++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~ 81 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLS-HKHLVLNYGVC 81 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSC-CTTBCCEEEEE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCC-CCCEeEEEEEE
Confidence 3468999999999999999999998877 46999998643 2345578999999999998 99999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC-----CCCee
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-----DSPLK 211 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-----~~~ik 211 (480)
.+++..++||||+.+++|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||++.++. .+.+|
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence 999999999999999999999987654 999999999999999999999999999999999999964322 11299
Q ss_pred EeecccceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHcCCCcC
Q 011647 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVP-PFWGETEQSIFDAILRGHIDF 288 (480)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~-pf~~~~~~~~~~~~~~~~~~~ 288 (480)
|+|||++..... .....||+.|+|||++.+ .++.++||||||+++|+|++|.. ||......... .........
T Consensus 162 l~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~~~ 237 (289)
T 4fvq_A 162 LSDPGISITVLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYEDRHQL 237 (289)
T ss_dssp ECCCCSCTTTSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTCCC
T ss_pred eccCcccccccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhhccCCC
Confidence 999999875432 234468899999998864 48999999999999999999554 55444444333 333333322
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+ ...++++.++|.+||+.||.+|||+.++++|
T Consensus 238 ~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 238 P----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp C----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred C----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 3457889999999999999999999999975
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=365.34 Aligned_cols=256 Identities=16% Similarity=0.202 Sum_probs=194.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCC-----CceEEEEEecccccCChhc--------HHHHHHHHHHHHHccCCCCee
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDD--------VEDVRREVQIMHHLTGHRNIV 131 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~~hp~iv 131 (480)
..++|.+++.||+|+||+||+|.+..+ ++.||||++.......... ...+..|+..+..+. ||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~~iv 111 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK-YLGVP 111 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS-CCCSC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc-CCCCC
Confidence 446899999999999999999998764 5889999986432100000 011223344445555 99999
Q ss_pred EEEEEEEeC----CeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC
Q 011647 132 ELKGAYEDR----HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (480)
Q Consensus 132 ~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 206 (480)
++++++... ...++||||+ |++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++. ..
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KN 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SC
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CC
Confidence 999998764 5589999999 99999999876 67999999999999999999999999999999999999963 24
Q ss_pred CCCeeEeecccceecCCCC--------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-H
Q 011647 207 DSPLKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-S 276 (480)
Q Consensus 207 ~~~ikl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~ 276 (480)
++.+||+|||+++.+.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... .
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 6789999999998754321 1133469999999999875 4899999999999999999999999864322 2
Q ss_pred HHHHHHcC---CC-cCC--CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 277 IFDAILRG---HI-DFS--SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 277 ~~~~~~~~---~~-~~~--~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
........ .. .+. ......+|+++.+++..||+.||.+||++.++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 11111100 00 000 0011467899999999999999999999999975
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=347.97 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=210.2
Q ss_pred ccceeecc-eecccCCeEEEEEEE--cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGR-ELGRGQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~-~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..+|.+.+ .||+|+||+||+|.+ ..+++.||||++.... ......+.+.+|+.+++++. ||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE-CCCC
Confidence 46799988 999999999999954 5667899999987543 23344678999999999998 99999999999 5677
Q ss_pred EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
.++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECC
T ss_pred cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe---CCCcEEEccCCcceeec
Confidence 899999999999999999888899999999999999999999999999999999999995 45679999999998765
Q ss_pred CCCcc----ccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ....|++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+.... ....+
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 245 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGC 245 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCC
Confidence 43321 22356788999999864 47889999999999999999 999999988888777776654321 22468
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++++.++|.+||+.||.+|||+.++++
T Consensus 246 ~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 246 PREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999999999975
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=354.61 Aligned_cols=252 Identities=24% Similarity=0.379 Sum_probs=209.1
Q ss_pred cccceeecceecccCCeEEEEEEE-----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+++.||+|+||+||+|.+ ..+++.||||++.... .....+.+.+|+.++.++.+||||+++++++..
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence 457899999999999999999985 3567899999986532 334457789999999999669999999999876
Q ss_pred CC-eEEEEEecCCCCchHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecc
Q 011647 140 RH-SVNLIMDLCAGGELFDRIIAKGH----------------YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (480)
Q Consensus 140 ~~-~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 202 (480)
.+ .+++||||+++++|.+++..... +++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence 54 58999999999999999987654 89999999999999999999999999999999999994
Q ss_pred cCCCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-H
Q 011647 203 SSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQ-S 276 (480)
Q Consensus 203 ~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~-~ 276 (480)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.... .
T Consensus 183 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 259 (316)
T 2xir_A 183 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259 (316)
T ss_dssp ---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred ---CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence 567799999999987643322 223467889999998864 58999999999999999998 99999876643 3
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
....+..+.. .. ....+++++.++|.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~-~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 260 FCRRLKEGTR-MR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHHTCC-CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhccCcc-CC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3344443322 11 124578999999999999999999999999976
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=347.49 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=206.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+.+++.+.+|+++..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence 456789999999999999999999999999999999865432 245889999999999444455666666788889
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999999 8999999874 4579999999999999999999999999999999999999644467789999999998765
Q ss_pred CCCc--------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcCCCcCCC
Q 011647 223 PGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSS 290 (480)
Q Consensus 223 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~~ 290 (480)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ......+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 4322 245679999999999875 588999999999999999999999976432 2233333322222221
Q ss_pred -CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 291 -DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 291 -~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+|+++.++|.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 112467899999999999999999999999975
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=342.47 Aligned_cols=247 Identities=24% Similarity=0.443 Sum_probs=212.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|.+.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 80 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICL 80 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCeEE
Confidence 367999999999999999999987 567899999875432 3367899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 81 VTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp EECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEcccccccccccc
Confidence 99999999999999765 5699999999999999999999999999999999999994 5667999999999865432
Q ss_pred C--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 225 D--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
. ......|++.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+..... ...+++.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l 234 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV 234 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC---CccCcHHH
Confidence 1 122346788999999986 458899999999999999999 8999999888888877776543222 24578999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+++.+||+.||++|||+.+++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999999863
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=349.64 Aligned_cols=247 Identities=26% Similarity=0.435 Sum_probs=210.5
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~---- 139 (480)
.+..+|.+.+.||+|+||.||+|.+..+++.||+|++.... +.+.+|+.+++++. ||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 79 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD-HVNIVHYNGCWDGFDYD 79 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCC-CCCEEEEeeeEeccccC
Confidence 45678999999999999999999999999999999986432 35678999999998 9999999998854
Q ss_pred ------------CCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC
Q 011647 140 ------------RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (480)
Q Consensus 140 ------------~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 205 (480)
...+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--- 156 (284)
T 2a19_B 80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV--- 156 (284)
T ss_dssp ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---
T ss_pred cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc---
Confidence 45589999999999999999754 5799999999999999999999999999999999999995
Q ss_pred CCCCeeEeecccceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC
Q 011647 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (480)
Q Consensus 206 ~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~ 284 (480)
.++.+||+|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.. .......+...
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--~~~~~~~~~~~ 234 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--TSKFFTDLRDG 234 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH--HHHHHHHHHTT
T ss_pred CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh--HHHHHHHhhcc
Confidence 456799999999988766555556689999999998865 489999999999999999999988743 22233333332
Q ss_pred CCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.. ...++..+.++|.+||..||.+|||+.++++|.|.-.
T Consensus 235 ~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 235 II------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 22 2457899999999999999999999999999988643
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=354.47 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=210.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCc-----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQ-----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+.+.||+|+||+||+|.+..+++ .||+|++.... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999999999999999977654 79999986432 33456789999999999945999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccC
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAK--------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~ 204 (480)
..+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~-- 198 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-- 198 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE--
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC--
Confidence 999999999999999999988653 3589999999999999999999999999999999999995
Q ss_pred CCCCCeeEeecccceecCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 011647 205 AEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279 (480)
Q Consensus 205 ~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~ 279 (480)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|++ |..||.+........
T Consensus 199 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 277 (333)
T 2i1m_A 199 -NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277 (333)
T ss_dssp -GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH
T ss_pred -CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH
Confidence 456799999999986543322 223457889999998864 58999999999999999998 999998876555444
Q ss_pred HHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+......... ....++.+.++|.+||+.||.+|||+.++++
T Consensus 278 ~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 278 KLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 44443332222 2457899999999999999999999999986
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=349.11 Aligned_cols=249 Identities=25% Similarity=0.404 Sum_probs=202.9
Q ss_pred ccceeecceecccCCeEEEEEE----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC-
Q 011647 66 RNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~- 140 (480)
..+|++.+.||+|+||.||+|+ +..+++.||||++.... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCC
Confidence 4679999999999999999999 56789999999987543 3345678999999999998 99999999999876
Q ss_pred -CeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 141 -HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
..+++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLT 173 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTC
T ss_pred CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc---CCCCEEECccccc
Confidence 678999999999999999954 46799999999999999999999999999999999999995 4567999999999
Q ss_pred eecCCCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC--------------h-HHHH
Q 011647 219 VFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--------------E-QSIF 278 (480)
Q Consensus 219 ~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~--------------~-~~~~ 278 (480)
........ .....||+.|+|||++.+ .++.++||||||+++|+|++|..|+.... . ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87654432 234568889999998864 57889999999999999999998863221 1 1122
Q ss_pred HHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..+..+. . ....+.+++++.+||.+||+.||.+|||+.++++
T Consensus 254 ~~~~~~~-~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 254 NTLKEGK-R--LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHTTC-C--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHhccC-C--CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 2222221 1 2223578999999999999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=356.22 Aligned_cols=254 Identities=27% Similarity=0.432 Sum_probs=190.5
Q ss_pred CcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-
Q 011647 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE- 138 (480)
Q Consensus 60 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~- 138 (480)
...+....+|++.+.||+|+||+||+|.+..+++.||||++... .....+.+.+|+.++.++.+||||+++++++.
T Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~ 97 (337)
T 3ll6_A 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI 97 (337)
T ss_dssp CEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred ceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccc
Confidence 33444556899999999999999999999999999999988543 33455778999999999977999999999984
Q ss_pred -------eCCeEEEEEecCCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCC
Q 011647 139 -------DRHSVNLIMDLCAGGELFDRIIA---KGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAE 206 (480)
Q Consensus 139 -------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~ 206 (480)
....+++||||+. |+|.+++.. .+.+++..++.++.||+.||.|||++| |+||||||+|||+ +.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~---~~ 173 (337)
T 3ll6_A 98 GKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SN 173 (337)
T ss_dssp CTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE---CT
T ss_pred cccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE---CC
Confidence 3445899999995 689888764 567999999999999999999999999 9999999999999 45
Q ss_pred CCCeeEeecccceecCCCCcc-------------ccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCC
Q 011647 207 DSPLKATDFGLSVFFKPGDVF-------------KDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPF 269 (480)
Q Consensus 207 ~~~ikl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf 269 (480)
++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++|..||
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~ 253 (337)
T 3ll6_A 174 QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253 (337)
T ss_dssp TSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCC
Confidence 677999999999876433211 1456999999999873 34788999999999999999999999
Q ss_pred CCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
.......... .... .......+..+.+||.+||+.||.+|||+.++++|-+
T Consensus 254 ~~~~~~~~~~----~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 254 EDGAKLRIVN----GKYS--IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ----------------CC--CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cchhHHHhhc----Cccc--CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 7655433322 2222 2223467788999999999999999999999998744
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-45 Score=343.31 Aligned_cols=246 Identities=18% Similarity=0.265 Sum_probs=210.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC--Ce
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~--~~ 142 (480)
..++|.+.+.||+|+||+||+|.+. ++.||||++.... ......+.+.+|+.++++++ ||||+++++++.+. +.
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 83 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPH 83 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSS
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcC-CCchhheEEEEccCCCCC
Confidence 3467999999999999999999985 7889999987543 23445678999999999997 99999999999877 78
Q ss_pred EEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 143 VNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
.++||||+++++|.+++.... .+++..++.++.||+.||.|||++| |+||||||+||++ +.++.++|+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVK 160 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSC
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEeccce
Confidence 899999999999999998765 4899999999999999999999999 9999999999999 45677999999887
Q ss_pred eecCCCCccccCCCCcccccccccccc-C---CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRRN-Y---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~---~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
..... ....||+.|+|||++.+. + +.++||||||+++|+|++|..||.+.........+........ ...
T Consensus 161 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 234 (271)
T 3kmu_A 161 FSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IPP 234 (271)
T ss_dssp CTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--CCT
T ss_pred eeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--CCC
Confidence 64322 345789999999998643 3 3379999999999999999999998888777666665543322 235
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+++++.++|.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 235 GISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 78999999999999999999999999985
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=348.08 Aligned_cols=252 Identities=25% Similarity=0.473 Sum_probs=198.3
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|++.+.||+|+||+||+|.+.. .||+|++.... ......+.+.+|+.+++++. ||||++++++. ....
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~~ 93 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAPQ 93 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSSS
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccC-CCHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCCc
Confidence 4456789999999999999999998754 59999986543 24455678999999999998 99999999965 5667
Q ss_pred EEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++||||+.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEK 170 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC-----
T ss_pred cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCCCEEEccceecccc
Confidence 8999999999999998854 45699999999999999999999999999999999999995 4667999999999765
Q ss_pred CC---CCccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHcCCCcCCC-CC
Q 011647 222 KP---GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSS-DP 292 (480)
Q Consensus 222 ~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~-~~ 292 (480)
.. ........||+.|+|||++. ..++.++||||||+++|+|++|..||.+.... .....+..+...... ..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 250 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSS
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhc
Confidence 32 22234467999999999884 34788999999999999999999999875544 344444444333222 22
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...+|+++.+||.+||+.||.+|||+.++++
T Consensus 251 ~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 3468899999999999999999999999985
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=351.67 Aligned_cols=252 Identities=22% Similarity=0.368 Sum_probs=207.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCC----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
....+|.+.+.||+|+||+||+|.+..++ ..||||++.... .......+.+|+.+++++. ||||+++++++..
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 117 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISK 117 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEec
Confidence 34568999999999999999999987553 359999986432 3344567899999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
.+..++||||+++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 118 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLS 194 (333)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC-
T ss_pred CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECCCCcc
Confidence 99999999999999999999765 579999999999999999999999999999999999999 45678999999999
Q ss_pred eecCCCCc----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 219 VFFKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 219 ~~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
........ .....+|+.|+|||++. ..++.++||||||+++|+|++ |..||......+....+..+... +.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~---~~ 271 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL---PT 271 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CC
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC---CC
Confidence 87643221 12335678999999986 458899999999999999998 99999998888887777665321 12
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
...+++.+.++|.+||+.||.+||++.+++++
T Consensus 272 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 24689999999999999999999999999863
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=344.77 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=207.5
Q ss_pred cccceeecceecccCCeEEEEEEEcC---CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..++|.+.+.||+|+||+||+|.+.. ++..||+|++.... .....+.+.+|+.+++++. ||||+++++++.+ +
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~ 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEE-E 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHC-CTTBCCEEEEECS-S
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCC-CCCcceEEEEEcC-C
Confidence 45789999999999999999999754 34569999986542 3445678999999999998 9999999999865 4
Q ss_pred eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---SPECVKLGDFGLSRY 162 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---ETTEEEECCCCGGGC
T ss_pred CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---CCCcEEeCccCCCcc
Confidence 568999999999999999765 4599999999999999999999999999999999999995 456799999999987
Q ss_pred cCCCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
...... .....||+.|+|||++. ..++.++||||||+++|+|++ |..||...........+....... ....+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 239 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---KPDLC 239 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---CCTTC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC---CCCCC
Confidence 643321 23346788999999986 458999999999999999998 999998877777666665543221 22468
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
++.+.++|.+||..||++|||+.+++++
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 240 PPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 8999999999999999999999999864
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=371.83 Aligned_cols=250 Identities=22% Similarity=0.389 Sum_probs=215.2
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+.....|.+.+.||+|+||+||+|.++.++..||||++.... ...+.+.+|+.+++++. ||||+++++++.....
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 290 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP 290 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcC-CCCEeeEEEEEecCCc
Confidence 334577999999999999999999999989999999986532 24578999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~ 367 (495)
T 1opk_A 291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRL 367 (495)
T ss_dssp CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEEC
T ss_pred EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeeccccee
Confidence 99999999999999999864 459999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
...... .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+.........+..+.. ......+
T Consensus 368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~ 444 (495)
T 1opk_A 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR---MERPEGC 444 (495)
T ss_dssp CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC---CCCCTTC
T ss_pred ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCC
Confidence 643321 12345678899999986 458999999999999999999 9999998887777766655422 2223578
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++++.+||.+||+.||++|||+.++++
T Consensus 445 ~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 445 PEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 999999999999999999999999976
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=355.61 Aligned_cols=247 Identities=23% Similarity=0.309 Sum_probs=197.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC----
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~---- 141 (480)
.++|++.+.||+|+||+||+|++. ++.||||++.... .......+|+.++++++ ||||+++++++....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMK-HENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcCC-CCCchhhcceeccCCCCCc
Confidence 468999999999999999999886 6899999986432 23355667899999998 999999999998744
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc----------CCeecCCCCcceecccCCCCCCee
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM----------GVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
.+++|||||++|+|.+++.. +.+++..++.++.||+.||.|||+. ||+||||||+|||+ +.++.+|
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~k 171 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTAC 171 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeEE
Confidence 47999999999999998865 4699999999999999999999999 99999999999999 4567899
Q ss_pred EeecccceecCCCCc---cccCCCCccccccccccc------cCCCchhHHHHHHHHHHHHhCCCCCCCCCh--------
Q 011647 212 ATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETE-------- 274 (480)
Q Consensus 212 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~lltg~~pf~~~~~-------- 274 (480)
|+|||+++....... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+...
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 999999987654322 234679999999999864 356688999999999999999999976432
Q ss_pred --------HHHHHHHHcCCCcCCCC-CC--CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 275 --------QSIFDAILRGHIDFSSD-PW--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 275 --------~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
......+.......... .+ ...++++.+||.+||+.||++|||+.++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 22222222222111111 00 112356999999999999999999999975
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=344.74 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=212.2
Q ss_pred cccceeecc-eecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGR-ELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~-~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..++|.+.+ .||+|+||+||+|.+. .++..||||++... ......+.+.+|+.+++++. ||||+++++++ ..+
T Consensus 7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~-~~~ 82 (287)
T 1u59_A 7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLD-NPYIVRLIGVC-QAE 82 (287)
T ss_dssp CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEE-ESS
T ss_pred cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCC-CCCEeEEEEEe-cCC
Confidence 346677776 9999999999999864 46788999998654 23455678999999999997 99999999999 556
Q ss_pred eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKA 159 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEE
T ss_pred CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECcccceee
Confidence 789999999999999988654 4699999999999999999999999999999999999995 456799999999987
Q ss_pred cCCCCc----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 221 FKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 221 ~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
...... .....||+.|+|||++. ..++.++||||||+++|+|++ |..||......+....+..+.... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~---~~~ 236 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPP 236 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCT
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC---CCC
Confidence 653322 12345688999999986 458899999999999999998 999999888877777776654321 224
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
.+++++.++|.+||..||++|||+.++++|.+
T Consensus 237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 78999999999999999999999999998643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=365.77 Aligned_cols=243 Identities=23% Similarity=0.384 Sum_probs=207.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC-eE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-SV 143 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-~~ 143 (480)
..++|.+.+.||+|+||+||+|.+. ++.||||++.... ..+.+.+|+.++++++ ||||+++++++.... .+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTCC-CTTBCCEEEEEECTTSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCCCce
Confidence 4578999999999999999999985 6799999986532 3477899999999998 999999999987655 79
Q ss_pred EEEEecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 144 NLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
++|||||++|+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCcccc
Confidence 999999999999999987654 7999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
... .....+++.|+|||++.+ .++.++||||||+++|||++ |..||.+....+....+..+.. ......+|++
T Consensus 340 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~p~~~~~~ 414 (450)
T 1k9a_A 340 SST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPA 414 (450)
T ss_dssp C--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC---CCCCTTCCHH
T ss_pred ccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCCHH
Confidence 332 223467889999999864 58999999999999999998 9999998887777777766532 1223578999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.+||.+||+.||.+|||+.++++
T Consensus 415 l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 415 VYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999975
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=352.98 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=203.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceE----EEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF----ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.++|++.+.||+|+||+||+|.+..+++.| |+|.+... ......+.+.+|+.+++++. ||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC
Confidence 467999999999999999999998888765 55555432 23345678999999999998 999999999998755
Q ss_pred eEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.++|+||+.+++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc---CCCCEEEccCcceeE
Confidence 7899999999999999876 45699999999999999999999999999999999999995 456799999999987
Q ss_pred cCCCCc---cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 221 FKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 221 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+....... ..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 243 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI 243 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCcc
Confidence 643321 223457889999998864 58999999999999999999 999999988877777666554222 2246
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.++.++|.+||..||.+|||+.++++
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=347.68 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=201.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++..... .+.+.+|+.+++.+.+|+++..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 456789999999999999999999999999999998754332 134788999999999455555666666888899
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999999 9999999875 4579999999999999999999999999999999999999554567789999999998765
Q ss_pred CCCc--------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHcCCCcCCC
Q 011647 223 PGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---SIFDAILRGHIDFSS 290 (480)
Q Consensus 223 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~---~~~~~~~~~~~~~~~ 290 (480)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... .....+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 4322 235679999999999865 5889999999999999999999999764321 222222222222111
Q ss_pred -CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 291 -DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 291 -~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.....+|+++.++|.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 112467899999999999999999999999976
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=350.07 Aligned_cols=252 Identities=23% Similarity=0.378 Sum_probs=202.8
Q ss_pred cccceeecceecccCCeEEEEEEEcC---CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..++|.+++.||+|+||+||+|.+.. ++..||+|++..... .....+.+.+|+.+++++. ||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeecc
Confidence 35789999999999999999998765 456899999865432 3445678999999999998 999999999987655
Q ss_pred -----eEEEEEecCCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCe
Q 011647 142 -----SVNLIMDLCAGGELFDRIIA------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (480)
Q Consensus 142 -----~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~i 210 (480)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcE
Confidence 35999999999999999853 3569999999999999999999999999999999999999 456779
Q ss_pred eEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCC
Q 011647 211 KATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (480)
Q Consensus 211 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~ 285 (480)
||+|||++....... ......+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+.
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 266 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC
Confidence 999999998764332 1223457889999999864 58999999999999999999 999999888877777776654
Q ss_pred CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.. .....+++++.++|.+||..||.+|||+.+++++
T Consensus 267 ~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 267 RL---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp CC---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CC---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 32 2235688999999999999999999999999864
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=377.94 Aligned_cols=242 Identities=23% Similarity=0.327 Sum_probs=205.0
Q ss_pred ceecccCCeEEEEEEE--cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
+.||+|+||+||+|.+ +.+++.||||++.... ......+.+.+|+.++++++ |||||++++++.. +..++|||||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999955 4567899999987543 24445688999999999998 9999999999864 5688999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc----
Q 011647 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---- 226 (480)
Q Consensus 151 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---- 226 (480)
++|+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||++ .++.+||+|||+++.......
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCTTHHHHTTC-------
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---CCCCEEEEEcCCccccccCcccccc
Confidence 9999999999888999999999999999999999999999999999999995 456799999999987644321
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
.....||+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+....+..+.... ....+++++.+||
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li 605 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGCPREMYDLM 605 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHHHHHHH
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHH
Confidence 223456788999999865 58999999999999999998 999999999888888877764322 2246899999999
Q ss_pred HHhcccCcCCCCCHHHHhc
Q 011647 305 KKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~l~ 323 (480)
.+||+.||++|||+.++++
T Consensus 606 ~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHH
Confidence 9999999999999999975
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=376.99 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=208.0
Q ss_pred ccceeecc-eecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGR-ELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~-~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
...+.+.+ .||+|+||+||+|.++ .++..||||++.... .....+.+.+|+.++++++ |||||++++++.. +.
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-hpniv~l~~~~~~-~~ 409 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EA 409 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCC-CTTBCCEEEEEES-SS
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEecc-CC
Confidence 34555555 8999999999999876 345679999987542 3345688999999999997 9999999999976 56
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+++|||||.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCSTTTTC
T ss_pred eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccCcccc
Confidence 89999999999999998754 4599999999999999999999999999999999999995 4667999999999875
Q ss_pred CCCCc----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 222 KPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... .....+++.|+|||++. +.++.++|||||||++|||++ |..||.+....+....+..+... ...+.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~ 563 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 563 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC---CCCTT
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCCc
Confidence 43221 12234568899999986 468999999999999999998 99999998888888887766432 12246
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHh---cCCcccc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVL---NHPWMRV 329 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l---~h~~~~~ 329 (480)
+++++.+||.+||..||++||++.+++ ++.|+..
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 899999999999999999999999985 4555544
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=365.16 Aligned_cols=248 Identities=22% Similarity=0.385 Sum_probs=212.0
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|.+.+.||+|+||+||+|.+.. +..||||++.... ...+.+.+|+.+++++. ||||+++++++. .+.
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~-~~~ 256 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVT-KEP 256 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS----BCHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSS
T ss_pred eechHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC----ccHHHHHHHHHHHhhCC-CCCEeeEEEEEe-CCc
Confidence 4456789999999999999999999864 6789999987532 34678999999999998 999999999986 667
Q ss_pred EEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++|||||.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARV 333 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGG
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceE
Confidence 89999999999999999754 368999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ......+++.|+|||++. +.++.++|||||||++|||++ |..||.+....+....+..+... +....+
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~ 410 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---PRPENC 410 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCC---CCCTTS
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCC
Confidence 54321 112335678899999986 568999999999999999999 99999998888888777665321 223478
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++++.+||.+||+.||++|||+.++++
T Consensus 411 ~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 411 PEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 999999999999999999999999975
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=346.83 Aligned_cols=251 Identities=24% Similarity=0.388 Sum_probs=203.5
Q ss_pred ccceeecceecccCCeEEEEEEEcC-CCc--eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKD-TKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.++|++.+.||+|+||+||+|.+.. +++ .||||++...........+.+.+|+.+++++. ||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-
Confidence 4689999999999999999998643 333 69999987654444556788999999999998 999999999997655
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc---CCCCEEEccccccccc
Confidence 88999999999999988764 5699999999999999999999999999999999999995 4567999999999876
Q ss_pred CCCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 222 KPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... .....||+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+.......+. ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 249 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PED 249 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--CcC
Confidence 54332 123467889999999864 47889999999999999999 99999999888888877765544332 357
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+++++.++|.+||..||.+|||+.++++
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 8999999999999999999999999987
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=385.90 Aligned_cols=260 Identities=25% Similarity=0.415 Sum_probs=212.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe------C
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------R 140 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~------~ 140 (480)
++|.+.+.||+|+||+||+|.+..+|+.||||++... ......+.+.+|+.+++++. ||||+++++++.. .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCceeeeecccccccCC
Confidence 6799999999999999999999999999999998643 24455678999999999998 9999999998765 6
Q ss_pred CeEEEEEecCCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
+..++|||||+|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||+++.++....+||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 77899999999999999998654 599999999999999999999999999999999999997655555699999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--------------HH
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA--------------IL 282 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~--------------~~ 282 (480)
+.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+......+.. ..
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 998766665666789999999999864 589999999999999999999999976543221100 00
Q ss_pred cCCCcC------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 283 RGHIDF------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 283 ~~~~~~------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.+...+ +....+.+++.+.++|.+||..||++|||+.++++||||+.
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 111111 11112236788999999999999999999999999999964
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=339.87 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=211.0
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|++.+.||+|+||+||+|.+. ++..||||++.... ...+.+.+|+.+++++. ||||+++++++. .+.
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~ 81 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQ-HQRLVRLYAVVT-QEP 81 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSS
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc----ccHHHHHHHHHHHHhCC-CcCcceEEEEEc-CCC
Confidence 445678999999999999999999976 46789999986532 23578899999999998 999999999986 456
Q ss_pred EEEEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARL 158 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEE
T ss_pred cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCccccc
Confidence 899999999999999886543 69999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
...... .....+++.|+|||++. +.++.++||||||+++|+|++ |..||.+....+....+..+... .....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNC 235 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTC
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCcccc
Confidence 654332 22345778999999986 458899999999999999999 99999998888877777665322 222468
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++++.++|.+||..||++|||+.++++
T Consensus 236 ~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 236 PEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999999999999999999999999985
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=351.21 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=203.0
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE----eC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----DR 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~----~~ 140 (480)
..++|.+.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFN-HPNILRLVAYCLRERGAK 102 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCC
Confidence 457899999999999999999999999999999998542 3445678999999999997 999999999986 34
Q ss_pred CeEEEEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 141 HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...++||||+.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~dfg 179 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLG 179 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEecC
Confidence 578999999999999998875 4679999999999999999999999999999999999999 456779999999
Q ss_pred cceecCCCC----------ccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHH
Q 011647 217 LSVFFKPGD----------VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDA 280 (480)
Q Consensus 217 ~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~--~~~~~~~ 280 (480)
++....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.... .......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 259 (317)
T 2buj_A 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259 (317)
T ss_dssp SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH
T ss_pred cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH
Confidence 987643211 0123457999999999853 26889999999999999999999995311 1111222
Q ss_pred HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+.. ...+ +..+.+++++.++|.+||+.||.+|||+.+++++
T Consensus 260 ~~~-~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 260 VQN-QLSI--PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHC-C--C--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhc-cCCC--CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 222 2222 2235789999999999999999999999999986
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=350.76 Aligned_cols=249 Identities=23% Similarity=0.382 Sum_probs=206.2
Q ss_pred ccceeecceecccCCeEEEEEE----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE--e
Q 011647 66 RNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--D 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~--~ 139 (480)
.++|++.+.||+|+||+||+|+ +..+++.||||++... .....+.+.+|+.+++++. ||||+++++++. +
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALH-SDFIVKYRGVSYGPG 97 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCC
Confidence 3689999999999999999999 5678899999998643 3445577999999999997 999999999886 5
Q ss_pred CCeEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
...+++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLA 174 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCGGGC
T ss_pred CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC---CCCCEEEcccccc
Confidence 5679999999999999999976 45699999999999999999999999999999999999995 4667999999999
Q ss_pred eecCCCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------------HHH
Q 011647 219 VFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------------SIF 278 (480)
Q Consensus 219 ~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~---------------~~~ 278 (480)
........ .....||+.|+|||++.+ .++.++||||||+++|+|++|..||...... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 87654332 233468888999998865 4788999999999999999999998654322 122
Q ss_pred HHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..+..+. . ....+.+++++.+||.+||+.||++|||+.+++++
T Consensus 255 ~~~~~~~-~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 255 ELLEEGQ-R--LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHHHTTC-C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhhccc-C--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2222222 1 12235789999999999999999999999999753
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=360.76 Aligned_cols=250 Identities=18% Similarity=0.247 Sum_probs=199.2
Q ss_pred cccccceeecceecccCCeEEEEEE-----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccC--CCCeeEEEE
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG--HRNIVELKG 135 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~--hp~iv~~~~ 135 (480)
....++|.+.+.||+|+||+||+|. +..+++.||||++... ....+.+|+.++..+.. |+||+++++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 3345789999999999999999994 6778999999998643 23567788888877753 899999999
Q ss_pred EEEeCCeEEEEEecCCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceeccc-------
Q 011647 136 AYEDRHSVNLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS------- 203 (480)
Q Consensus 136 ~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~------- 203 (480)
++...+..++|||||++|+|.+++.. .+.+++..++.++.||+.||+|||++|||||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999999974 456999999999999999999999999999999999999964
Q ss_pred -CCCCCCeeEeecccceecC---CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 011647 204 -SAEDSPLKATDFGLSVFFK---PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIF 278 (480)
Q Consensus 204 -~~~~~~ikl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~ 278 (480)
...++.+||+|||+++... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~- 293 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC- 293 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-
Confidence 2226789999999997643 2334456789999999999875 489999999999999999999999965432110
Q ss_pred HHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
.....+.. ...++.+.+++..||..+|.+|++..+.+.+.+
T Consensus 294 ----~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 294 ----KPEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp ----EECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred ----eechhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 00001111 124678999999999999999987666665433
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=352.12 Aligned_cols=259 Identities=20% Similarity=0.293 Sum_probs=204.7
Q ss_pred CcccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 60 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
.......++|.+.+.||+|+||+||+|.+. +++.||||++....... ....+.+|+.+++++. ||||+++++++..
T Consensus 23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~ 98 (326)
T 3uim_A 23 RELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQG--GELQFQTEVEMISMAV-HRNLLRLRGFCMT 98 (326)
T ss_dssp HHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-------CCCHHHHHHHGGGTCC-CTTBCCCCEEECC
T ss_pred HHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCch--HHHHHHHHHHHHHhcc-CCCccceEEEEec
Confidence 334556688999999999999999999864 58899999987543221 2236889999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHc---CCeecCCCCcceecccCCCCCCeeE
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSM---GVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
.+..++||||+.+++|.+++.... .+++..+..++.|++.||.|||++ ||+||||||+|||+ +.++.+||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl 175 (326)
T 3uim_A 99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVV 175 (326)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCEEE
T ss_pred CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCEEe
Confidence 999999999999999999997643 399999999999999999999999 99999999999999 45678999
Q ss_pred eecccceecCCCC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCC-----CChHHHHHHHHcC
Q 011647 213 TDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWG-----ETEQSIFDAILRG 284 (480)
Q Consensus 213 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~-----~~~~~~~~~~~~~ 284 (480)
+|||++....... ......||+.|+|||++. +.++.++||||||+++|+|++|..||.. .........+ ..
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV-KG 254 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH-TT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH-HH
Confidence 9999998764322 234456999999999885 4589999999999999999999999952 1111111111 11
Q ss_pred CCcC-----------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCc
Q 011647 285 HIDF-----------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (480)
Q Consensus 285 ~~~~-----------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~ 326 (480)
.... ........+..+.+++.+||+.||.+|||+.++++|-.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 1000 00001122467999999999999999999999998754
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=341.55 Aligned_cols=243 Identities=23% Similarity=0.380 Sum_probs=199.9
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-CCeE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSV 143 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-~~~~ 143 (480)
..++|++.+.||+|+||+||+|.+. ++.||||++... ...+.+.+|+.+++++. ||||+++++++.+ .+.+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 90 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGL 90 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-----hHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCCce
Confidence 3478999999999999999999875 789999998643 24577899999999998 9999999998754 4578
Q ss_pred EEEEecCCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 144 NLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
++||||+++++|.+++...+. +++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC----
T ss_pred EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE---eCCCcEEEeeccccccc
Confidence 999999999999999976543 8999999999999999999999999999999999999 45678999999998865
Q ss_pred CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
... .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+.. ......+++.
T Consensus 168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 242 (278)
T 1byg_A 168 SST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPA 242 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCCHH
T ss_pred ccc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCcccCCHH
Confidence 432 233467899999999864 58899999999999999998 9999998887777766655422 2223578999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+.++|.+||+.||.+|||+.++++
T Consensus 243 l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 243 VYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcCChhhCCCHHHHHH
Confidence 999999999999999999999975
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=358.78 Aligned_cols=256 Identities=17% Similarity=0.204 Sum_probs=197.5
Q ss_pred cccceeecceecccCCeEEEEEEEcC---CCceEEEEEecccccCChh--------cHHHHHHHHHHHHHccCCCCeeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRD--------DVEDVRREVQIMHHLTGHRNIVEL 133 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~~hp~iv~~ 133 (480)
..++|.+++.||+|+||+||+|.+.. ++..||||++......... ....+.+|+..+..+. ||||+++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~~ 113 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPLF 113 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCCE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCccee
Confidence 34689999999999999999999987 7889999998654211000 1133567888888887 9999999
Q ss_pred EEEEEe----CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCC
Q 011647 134 KGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 134 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
++++.. ....++||||+ |++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+.
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~~ 191 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN-PDQ 191 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS-TTS
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC-CCc
Confidence 999987 78899999999 999999998877899999999999999999999999999999999999996432 238
Q ss_pred eeEeecccceecCCCC--------ccccCCCCcccccccccccc-CCCchhHHHHHHHHHHHHhCCCCCCCC--ChHHHH
Q 011647 210 LKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGE--TEQSIF 278 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg~~pf~~~--~~~~~~ 278 (480)
+||+|||+++.+.... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+. ......
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 9999999998764221 12456799999999998754 899999999999999999999999652 222222
Q ss_pred HHHHcCCCcCCC-----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 279 DAILRGHIDFSS-----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 279 ~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..........+. .+...+++++.++|.+||..||++|||+.++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 111111111110 011268899999999999999999999999986
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=343.42 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=205.8
Q ss_pred ccceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE-EeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY-EDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~-~~~~ 141 (480)
..+|.+.+.||+|+||+||+|.+..+ +..||+|.+... ......+.+.+|+.+++++. ||||+++++++ ..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCC-CCCEeeeeeEEEcCCC
Confidence 45799999999999999999997543 346899988642 24455678999999999998 99999999985 5567
Q ss_pred eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
..++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARD 177 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCC
T ss_pred ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECccccccc
Confidence 889999999999999999763 458999999999999999999999999999999999999 4567899999999986
Q ss_pred cCCCC-----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 221 FKPGD-----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 221 ~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
..... ......||+.|+|||++.+ .++.++||||||+++|+|++ |.+||.+.........+..+......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 254 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP--- 254 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC---
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC---
Confidence 54322 1234567889999998864 58999999999999999999 67777777766666666665443322
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
..++..+.++|.+||+.||++|||+.++++
T Consensus 255 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 255 EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 457899999999999999999999999986
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=340.86 Aligned_cols=248 Identities=24% Similarity=0.345 Sum_probs=205.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
..|.+.+.||+|+||+||+|.+..++. .||+|++... ......+.+.+|+.+++++. ||||+++++++.+.+..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 97 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGL 97 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEecCCCC
Confidence 457788999999999999999765544 7999998642 24455678999999999998 99999999999766655
Q ss_pred -EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 144 -NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 144 -~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
++||||+.+++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDI 174 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTT
T ss_pred cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCcccc
Confidence 999999999999999976 4568999999999999999999999999999999999999 45678999999999765
Q ss_pred CCC-----CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 222 KPG-----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 222 ~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
... .......||+.|+|||.+.+ .++.++||||||+++|+|++ |.+||...........+....... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 251 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP---QPE 251 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---CCT
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---CCc
Confidence 332 12234568899999999865 58999999999999999999 555566666666666655544221 224
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+++.+.++|.+||+.||.+|||+.++++
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 68899999999999999999999999976
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=363.15 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=209.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|.+++.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.+|++|+.+..++......
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence 356789999999999999999999999999999998764432 134788999999999678888888888899999
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|||||+ +++|.+++.. .+.+++..++.|+.||+.||.|||++|||||||||+||||...+.++.+||+|||+++...
T Consensus 79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999999 9999999975 5679999999999999999999999999999999999999654567889999999998765
Q ss_pred CCCc--------cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcCCCcCC-
Q 011647 223 PGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFS- 289 (480)
Q Consensus 223 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~- 289 (480)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+..+........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 4322 125689999999999865 589999999999999999999999987443 333333322221111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
......++.++.+||.+||+.||++||++.++++
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0111467899999999999999999999998874
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=345.35 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=195.2
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHH--ccCCCCeeEEEEEEEe--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVELKGAYED-- 139 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~~hp~iv~~~~~~~~-- 139 (480)
.+.++|.+.+.||+|+||+||+|.+ +++.||||++... ....+.+|.+++.. +. ||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLR-HENILGFIASDMTSR 75 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhcc-CcCeeeEEEeecccc
Confidence 4567899999999999999999988 5789999998543 33566677777776 55 9999999998654
Q ss_pred --CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeecCCCCcceecccCCCCCC
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH--------SMGVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
...+++||||+++|+|.+++. ...+++..+..++.||+.||.||| ++||+||||||+|||+ +.++.
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~~~ 151 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQ 151 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTTSC
T ss_pred CCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCCCC
Confidence 356899999999999999884 457999999999999999999999 9999999999999999 45678
Q ss_pred eeEeecccceecCCCCc-----cccCCCCcccccccccccc-------CCCchhHHHHHHHHHHHHhC----------CC
Q 011647 210 LKATDFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSG----------VP 267 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~~lltg----------~~ 267 (480)
+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++| ..
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 99999999987544332 2234799999999998653 34689999999999999999 88
Q ss_pred CCCCCC----hHHHHHHHHcCCCcCCCCC----CCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 268 PFWGET----EQSIFDAILRGHIDFSSDP----WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 268 pf~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
||.... ...............+..+ ....++++.+||.+||+.||++|||+.++++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 886532 1222233222211111111 0124578999999999999999999999986
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=347.70 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=202.6
Q ss_pred cccce-eecceecccCCeEEEEEEE----cCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTY-IFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y-~~~~~lG~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
+.++| ++++.||+|+||+||++.. ..+++.||||++... ......+.+.+|+.+++++. ||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCC-CcchhhEEEEEec
Confidence 44455 9999999999999988764 457889999998754 23445678999999999998 9999999999987
Q ss_pred --CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...+++||||+++++|.+++... .+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 105 AGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGL 180 (318)
T ss_dssp TTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGG
T ss_pred CCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCccc
Confidence 46789999999999999988654 59999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------------HH
Q 011647 218 SVFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------------SI 277 (480)
Q Consensus 218 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~---------------~~ 277 (480)
+........ .....||+.|+|||++.+ .++.++||||||+++|+|++|..||...... ..
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 260 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence 988754432 234568889999999865 5788999999999999999999999654321 11
Q ss_pred HHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
...+... .. ......+++++.+||.+||+.||++|||+.++++
T Consensus 261 ~~~~~~~-~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 261 TELLERG-ER--LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHHTT-CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcc-cC--CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1222222 11 2223578999999999999999999999999975
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=360.91 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=209.4
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|.+.+.||+|+||+||+|.+.. +..||||++.... ...+.+.+|+.++++++ ||||+++++++.+ +.
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~ 252 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EP 252 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SS
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-Cc
Confidence 3455789999999999999999999976 4679999987533 23467899999999998 9999999999866 67
Q ss_pred EEEEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
+++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARL 329 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC-
T ss_pred eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---CCCCCEEECCCcccee
Confidence 8999999999999999864 3569999999999999999999999999999999999999 4567799999999987
Q ss_pred cCCCC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ......+++.|+|||++. +.++.++||||||+++|+|++ |..||.+....+....+..+... +..+.+
T Consensus 330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~ 406 (452)
T 1fmk_A 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPEC 406 (452)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTS
T ss_pred cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCC
Confidence 64322 122345678899999886 458999999999999999999 99999998888888777665321 222478
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc--CCccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN--HPWMR 328 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~--h~~~~ 328 (480)
++.+.++|.+||+.||++|||++++++ ..++.
T Consensus 407 ~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 999999999999999999999999986 35554
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=345.85 Aligned_cols=251 Identities=24% Similarity=0.364 Sum_probs=203.6
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEeccccc-CChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
.|..++.||+|+||+||+|.+ +++.||||++..... ......+.+.+|+.+++++. ||||+++++++.+.+..++|
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCceEEE
Confidence 455669999999999999987 578999999875432 23344678999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 147 MDLCAGGELFDRIIA---KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~ 185 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEK 185 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccc
Confidence 999999999998874 3469999999999999999999999999999999999999 4567899999999987543
Q ss_pred CCc---cccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHcCCCcC-------C
Q 011647 224 GDV---FKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHIDF-------S 289 (480)
Q Consensus 224 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~~~~~~~~-------~ 289 (480)
... .....||+.|+|||++.+.++.++||||||+++|+|++|..||....... ....+......+ .
T Consensus 186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 2nru_A 186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265 (307)
T ss_dssp CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence 221 23457999999999998889999999999999999999999997654322 222222211100 0
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 290 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.......+..+.+++.+||+.||.+|||+.+++++
T Consensus 266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 11112345678999999999999999999999863
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=355.18 Aligned_cols=249 Identities=24% Similarity=0.335 Sum_probs=198.6
Q ss_pred cceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-eCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE-DRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~-~~~~ 142 (480)
..|.+.+.||+|+||+||+|.+..+ +..||+|.+... ......+.+.+|+.+++++. ||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCC-CTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCCC
Confidence 4588899999999999999997643 246899988642 24455688999999999998 999999999864 4568
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM 242 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeeccccccc
Confidence 89999999999999999765 458999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCC-----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 222 KPGD-----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 222 ~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++ |.+||......+....+..+..... ..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~ 319 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PE 319 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CT
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CC
Confidence 4322 1233467889999998864 58999999999999999999 7888887776666666665543222 24
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.++..+.++|.+||+.||++|||+.+++++
T Consensus 320 ~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 688999999999999999999999999863
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=354.89 Aligned_cols=245 Identities=16% Similarity=0.207 Sum_probs=200.0
Q ss_pred ccceeecceecccCCeEEEEEEEcCC--------CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeE-----
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT--------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE----- 132 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~----- 132 (480)
.++|.+.+.||+|+||+||+|.+..+ ++.||||++... +.+.+|+.+++++. ||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~-h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAA-KPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHC-CHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhc-ccchhhhhhhh
Confidence 47899999999999999999999874 889999998643 35789999999998 998887
Q ss_pred ----------EEEEEEe-CCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcce
Q 011647 133 ----------LKGAYED-RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (480)
Q Consensus 133 ----------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Ni 199 (480)
+++++.. ....++||||+ +++|.+++... +.+++..++.++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 6777765 78899999999 99999999876 7899999999999999999999999999999999999
Q ss_pred ecccCCCCC--CeeEeecccceecCCCC--------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCC
Q 011647 200 LFSSSAEDS--PLKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPP 268 (480)
Q Consensus 200 l~~~~~~~~--~ikl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~p 268 (480)
|++ .++ .+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..|
T Consensus 191 l~~---~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 191 FVD---PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp EEE---TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred EEc---CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 995 344 79999999998654321 1234579999999999875 589999999999999999999999
Q ss_pred CCCCC--hHHHHHHHH---cCCCcCC--CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 269 FWGET--EQSIFDAIL---RGHIDFS--SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 269 f~~~~--~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
|.... ......... .....+. ...+..+++++.+||.+||..||++|||+.++++
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 98753 222222221 1111111 1122467999999999999999999999999976
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=339.66 Aligned_cols=239 Identities=29% Similarity=0.471 Sum_probs=193.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|.+. ++.||||.+... ...+.+.+|+.+++++. ||||+++++++. +..++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~--~~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLYGACL--NPVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-----THHHHHHHHHHHHHHCC-CTTBCCEEEBCT--TTTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-----hHHHHHHHHHHHHhcCC-CCCcCeEEEEEc--CCcEEE
Confidence 57999999999999999999885 678999998532 34578899999999998 999999999876 447899
Q ss_pred EecCCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH---cCCeecCCCCcceecccCCCCC-CeeEeecccce
Q 011647 147 MDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHS---MGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSV 219 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~-~ikl~Dfg~a~ 219 (480)
|||+++++|.+++..... +++..+..++.||+.||.|||+ +||+||||||+||+++ .++ .+||+|||++.
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~---~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV---AGGTVLKICDFGTAC 154 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE---TTTTEEEECCCCC--
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe---CCCCEEEEccccccc
Confidence 999999999999986653 7899999999999999999999 8999999999999995 334 37999999997
Q ss_pred ecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHcCCCcCCCCCCCCC
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||..... ......+..+.. ......+
T Consensus 155 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 229 (307)
T 2eva_A 155 DIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKNL 229 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTTC
T ss_pred ccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCccccc
Confidence 65422 234579999999999875 589999999999999999999999976433 233333333222 2223578
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+.++|.+||+.||.+|||+.++++
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=347.08 Aligned_cols=250 Identities=22% Similarity=0.373 Sum_probs=208.2
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|.+.+.||+|+||+||+|.+.. .||+|++..... .....+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPH 103 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSC
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCc
Confidence 3345789999999999999999999864 499999875432 2333456788999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+++||||++|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++ ++.+||+|||++...
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC--
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCcccc
Confidence 999999999999999987654 699999999999999999999999999999999999994 457999999998754
Q ss_pred CC------CCccccCCCCccccccccccc----------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCC
Q 011647 222 KP------GDVFKDLVGSAYYVAPEVLRR----------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285 (480)
Q Consensus 222 ~~------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 285 (480)
.. ........||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+.
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 259 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM 259 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTC
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCC
Confidence 21 122334569999999998753 36889999999999999999999999988887777776654
Q ss_pred CcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.... ....++.++.++|.+||..||++|||+.++++
T Consensus 260 ~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 260 KPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred CCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 3322 22367889999999999999999999999987
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=338.71 Aligned_cols=228 Identities=15% Similarity=0.105 Sum_probs=188.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
.+.++|++.+.||+|+||+||+|.+..+++.||||++...........+.+.+|+.++.++. ||||+++++++.+.+..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC-CCCcceeeEEEEECCcE
Confidence 45578999999999999999999999999999999998765555566688999999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|+||||++|++|.+++.. + .....+..++.||+.||.|||++||+||||||+|||++ .++.+||+++|
T Consensus 107 ~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~~kl~~~~------- 174 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGDVVLAYPA------- 174 (286)
T ss_dssp EEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSCEEECSCC-------
T ss_pred EEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCCEEEEecc-------
Confidence 999999999999998843 3 46667889999999999999999999999999999995 46678887443
Q ss_pred CCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHcCCCcCCCCCCCCCCHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFD---AILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 300 (480)
|++| ++.++|||||||++|+|++|+.||.+.+....+. .........+....+.+++++
T Consensus 175 ------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (286)
T 3uqc_A 175 ------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236 (286)
T ss_dssp ------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred ------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence 3332 6789999999999999999999998765432110 011111111111235789999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.++|.+||+.||++| |+.++++
T Consensus 237 ~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 237 SAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHHHcccCCccC-CHHHHHH
Confidence 999999999999999 9999987
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=348.52 Aligned_cols=250 Identities=21% Similarity=0.331 Sum_probs=193.7
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc-CCCCeeEEEEEEEeC-
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-GHRNIVELKGAYEDR- 140 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~hp~iv~~~~~~~~~- 140 (480)
..+.++|++.+.||+|+||+||+|.+. ++.||||++... ......+|.+++..+. .||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 445678999999999999999999985 789999998532 2244555666655541 499999999999887
Q ss_pred ---CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeecCCCCcceecccCCCCCC
Q 011647 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------GVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 141 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
..+++||||+++++|.+++.. ..+++..++.++.|++.||.|||++ ||+||||||+|||+ +.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CCCCC
Confidence 789999999999999999865 4799999999999999999999999 99999999999999 45678
Q ss_pred eeEeecccceecCCCCcc-----ccCCCCcccccccccccc-CCCc------hhHHHHHHHHHHHHhC----------CC
Q 011647 210 LKATDFGLSVFFKPGDVF-----KDLVGSAYYVAPEVLRRN-YGAE------ADIWSAGVILYILLSG----------VP 267 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~------~DiwslG~il~~lltg----------~~ 267 (480)
+||+|||++......... ....||+.|+|||++.+. .... +|||||||++|+|++| ..
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999876433221 245799999999998654 3333 8999999999999999 77
Q ss_pred CCCCCC----h-HHHHHHHHcCCCcCCCCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 268 PFWGET----E-QSIFDAILRGHIDFSSDP---WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 268 pf~~~~----~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
||.... . ......+.........+. ...+++++.++|.+||+.||.+|||+.++++|
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 775432 1 222222222211111110 11456779999999999999999999999874
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=362.81 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=213.3
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+...++|++.+.||+|+||+||+|.+.. +..||||++.... ...+.+.+|+.+|+++. ||||+++++++.+ +.
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~ 335 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EP 335 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SS
T ss_pred ecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEee-cc
Confidence 3456789999999999999999999976 4679999987543 23467999999999998 9999999999866 67
Q ss_pred EEEEEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 143 VNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
++||||||.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARL 412 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCTTSTTT
T ss_pred ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---cCCCcEEEccccccee
Confidence 8999999999999999964 3569999999999999999999999999999999999999 4567799999999986
Q ss_pred cCCCC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ......++..|+|||++. +.++.++|||||||++|||++ |..||.+....+....+..+... .....+
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~ 489 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPEC 489 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTC
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCC
Confidence 54321 112345678899999886 458999999999999999999 99999998888888877665321 122478
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC--Cccc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH--PWMR 328 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h--~~~~ 328 (480)
+.++.+||.+||+.||++|||+.++++. .++.
T Consensus 490 ~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 490 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 9999999999999999999999999863 5554
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=349.61 Aligned_cols=251 Identities=16% Similarity=0.219 Sum_probs=198.8
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-----ChhcHHHHHHHHHHHHHcc--------CCCCeeE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLT--------GHRNIVE 132 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~--------~hp~iv~ 132 (480)
.++|.+.+.||+|+||+||+|++ +|+.||||++...... .....+.+.+|+.+++.+. .||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 6799999999765321 3344578999999999886 5899998
Q ss_pred EEEEEE------------------------------eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 011647 133 LKGAYE------------------------------DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182 (480)
Q Consensus 133 ~~~~~~------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~ 182 (480)
+.+++. ..+.+|+|||||++|++.+.+.+ +.+++..++.++.||+.||.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence 888753 26889999999999987776644 67899999999999999999
Q ss_pred HHH-HcCCeecCCCCcceecccCC-----------------CCCCeeEeecccceecCCCCccccCCCCccccccccccc
Q 011647 183 YCH-SMGVMHRDLKPENFLFSSSA-----------------EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244 (480)
Q Consensus 183 ~lH-~~~ivH~Dlkp~Nil~~~~~-----------------~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 244 (480)
||| ++||+||||||+|||++..+ ....+||+|||+|+..... ..+||+.|+|||++.+
T Consensus 176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence 999 99999999999999997543 1127999999999876532 3479999999999987
Q ss_pred cCCCchhHHHHHHH-HHHHHhCCCCCCCCCh-HHHHHHHHcC-CCc--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHH
Q 011647 245 NYGAEADIWSAGVI-LYILLSGVPPFWGETE-QSIFDAILRG-HID--FSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319 (480)
Q Consensus 245 ~~~~~~DiwslG~i-l~~lltg~~pf~~~~~-~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 319 (480)
..+.++||||||++ .+++++|..||..... ......+... ... .....++.+++++.+||.+||+.| |++
T Consensus 252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~ 326 (336)
T 2vuw_A 252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT 326 (336)
T ss_dssp CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence 77889999998777 7788889999843221 1122233321 111 111112357889999999999976 999
Q ss_pred HHh-cCCccc
Q 011647 320 EVL-NHPWMR 328 (480)
Q Consensus 320 ~~l-~h~~~~ 328 (480)
|+| +||||+
T Consensus 327 e~l~~Hp~f~ 336 (336)
T 2vuw_A 327 DLLCQHSLFK 336 (336)
T ss_dssp HHHHHCGGGC
T ss_pred HHHhcCCCcC
Confidence 999 999995
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=358.56 Aligned_cols=247 Identities=16% Similarity=0.185 Sum_probs=192.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCC-CCe--------------
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNI-------------- 130 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~i-------------- 130 (480)
...|.+++.||+|+||+||+|.+..+|+.||||++...........+.+.+|+.+++.+. | +|.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCCE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccchh
Confidence 345889999999999999999999999999999987544444445688999999999887 4 221
Q ss_pred -------eEEEEEEEe-----CCeEEEEEecCCCCchHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHcCCee
Q 011647 131 -------VELKGAYED-----RHSVNLIMDLCAGGELFDRIIA-------KGHYSERAAANLCRQMVTVVHYCHSMGVMH 191 (480)
Q Consensus 131 -------v~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 191 (480)
..+..++.. ...++++|+++ +++|.+++.. .+.+++..+..++.||+.||.|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH 234 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 234 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 111111211 23467888877 6799888741 234788899999999999999999999999
Q ss_pred cCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccccccccc----------cc-cCCCchhHHHHHHHHH
Q 011647 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----------RR-NYGAEADIWSAGVILY 260 (480)
Q Consensus 192 ~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~----------~~-~~~~~~DiwslG~il~ 260 (480)
|||||+|||+ +.++.+||+|||+++.... .....+| +.|+|||++ .+ .++.++|||||||++|
T Consensus 235 rDiKp~NILl---~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 235 TYLRPVDIVL---DQRGGVFLTGFEHLVRDGA--SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp SCCCGGGEEE---CTTCCEEECCGGGCEETTE--EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred CCcccceEEE---ecCCeEEEEeccceeecCC--ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999 4566799999999886542 2455678 999999988 32 3678999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 261 ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 261 ~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
+|++|+.||...........+. ..+..+|+++.+||.+||..||++|||+.++++||||+
T Consensus 309 elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~ 368 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368 (413)
T ss_dssp HHHHSSCCCCTTGGGSCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred HHHHCCCCCCCcchhhhHHHHH--------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence 9999999998765543322221 12346889999999999999999999999999999997
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-43 Score=339.53 Aligned_cols=249 Identities=22% Similarity=0.356 Sum_probs=203.2
Q ss_pred cccceeecceecccCCeEEEEEE----EcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...+|++++.||+|+||.||+|. +..+++.||||++... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 114 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 114 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCC-CTTBCCEEEEECC-
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEec
Confidence 34679999999999999999998 4567899999998653 3445678999999999998 99999999998654
Q ss_pred C--eEEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 H--SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ~--~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
+ .+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL 191 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTT
T ss_pred CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc---CCCcEEEecCcc
Confidence 4 789999999999999999875 4599999999999999999999999999999999999995 456799999999
Q ss_pred ceecCCCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChH----------------H
Q 011647 218 SVFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ----------------S 276 (480)
Q Consensus 218 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~----------------~ 276 (480)
+........ .....++..|+|||++.+ .++.++||||||+++|+|++|..||...... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 987654332 123457788999998864 4788999999999999999999998543111 1
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
....+... ... +....+++++.++|.+||..||++|||+.++++
T Consensus 272 ~~~~~~~~-~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 272 LIELLKNN-GRL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHHTT-CCC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhcC-CCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11122221 111 223568999999999999999999999999985
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-43 Score=341.18 Aligned_cols=249 Identities=22% Similarity=0.322 Sum_probs=201.2
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHH--ccCCCCeeEEEEEEEeC
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVELKGAYEDR 140 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~~hp~iv~~~~~~~~~ 140 (480)
..+.++|.+.+.||+|+||+||+|.+ +++.||||++... ....+.+|++++.. +. ||||+++++++...
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLR-HENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcC-CCcEEEEEeeeccc
Confidence 34567899999999999999999998 4789999998542 34667889999888 55 99999999999877
Q ss_pred C----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeecCCCCcceecccCCCCC
Q 011647 141 H----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH--------SMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 141 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
. .+++||||+++++|.+++.. ..+++..++.++.||+.||.||| ++||+||||||+|||+ +.++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~~~ 184 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNG 184 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CTTS
T ss_pred CCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CCCC
Confidence 6 89999999999999999865 47999999999999999999999 8999999999999999 4567
Q ss_pred CeeEeecccceecCCCCc-----cccCCCCcccccccccccc-------CCCchhHHHHHHHHHHHHhC----------C
Q 011647 209 PLKATDFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSG----------V 266 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~~lltg----------~ 266 (480)
.+||+|||++........ .....||+.|+|||++.+. ++.++||||||+++|+|++| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 899999999987654332 2445799999999998654 23679999999999999999 7
Q ss_pred CCCCCCC-----hHHHHHHHHcCCCcCCCCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 267 PPFWGET-----EQSIFDAILRGHIDFSSDP---WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 267 ~pf~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.||.... .......+.........+. ....+..+.+||.+||+.||++|||+.++++|
T Consensus 265 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 265 LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 8886642 2333333333322211110 01234678999999999999999999999874
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=365.57 Aligned_cols=250 Identities=26% Similarity=0.354 Sum_probs=208.9
Q ss_pred ccccceeecceecccCCeEEEEEEEcCC---CceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
...++|.+++.||+|+||+||+|.+..+ +..||||.+... ......+.+.+|+.+++++. ||||+++++++. +
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-E 462 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC-S
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEe-c
Confidence 3457899999999999999999998654 457999987543 23344578999999999998 999999999985 5
Q ss_pred CeEEEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 HSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
+..++||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---CCCCEEEEecCCCe
Confidence 67899999999999999997654 699999999999999999999999999999999999995 45679999999998
Q ss_pred ecCCCCc--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 220 FFKPGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 220 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
....... .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+.... ..+.
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~~ 616 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPPN 616 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC---CCTT
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---CCcc
Confidence 7644322 223457789999998864 58999999999999999997 999999988888887777654321 2247
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+++.+.++|.+||..||.+|||+.++++
T Consensus 617 ~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 617 CPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999975
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=344.23 Aligned_cols=252 Identities=21% Similarity=0.324 Sum_probs=188.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHH--HHHccCCCCeeEEEEEEE-----
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI--MHHLTGHRNIVELKGAYE----- 138 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~--l~~l~~hp~iv~~~~~~~----- 138 (480)
.++|++.+.||+|+||+||+|.+ +++.||||++.... ...+..|.++ +..+. ||||+++++.+.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLME-HDNIARFIVGDERVTAD 82 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTT
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhcc-CcchhhheecccccccC
Confidence 46799999999999999999977 57899999986432 2344444444 33466 999999998653
Q ss_pred eCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeecCCCCcceecccCCCCCC
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM---------GVMHRDLKPENFLFSSSAEDSP 209 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~ivH~Dlkp~Nil~~~~~~~~~ 209 (480)
....+++|||||++|+|.+++... ..++..++.++.||+.||.|||+. ||+||||||+|||++ .++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCCc
Confidence 233678999999999999988654 458999999999999999999999 999999999999994 5678
Q ss_pred eeEeecccceecCCCC---------ccccCCCCccccccccccc--------cCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 011647 210 LKATDFGLSVFFKPGD---------VFKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLSGVPPFWGE 272 (480)
Q Consensus 210 ikl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~lltg~~pf~~~ 272 (480)
+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 9999999998764321 1224579999999999864 3567899999999999999997776432
Q ss_pred Ch-----------------HHHHHHHHc-CC--CcCCCC--CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc------C
Q 011647 273 TE-----------------QSIFDAILR-GH--IDFSSD--PWPNISSSAKDIVKKMLHADPKERLSAAEVLN------H 324 (480)
Q Consensus 273 ~~-----------------~~~~~~~~~-~~--~~~~~~--~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~------h 324 (480)
.. ......... .. ..++.. ....+++++.+||.+||+.||++|||+.++++ +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 21 111111111 11 111110 01124457999999999999999999999954 6
Q ss_pred Cccccc
Q 011647 325 PWMRVD 330 (480)
Q Consensus 325 ~~~~~~ 330 (480)
+|-+..
T Consensus 319 ~~~~~~ 324 (336)
T 3g2f_A 319 IWERNK 324 (336)
T ss_dssp CCCC--
T ss_pred HHHhcc
Confidence 666543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=373.13 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=203.9
Q ss_pred ccccccceeecceecccCCeEEEEEEEcC-CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~ 140 (480)
.+.+.++|++.+.||+|+||+||+|.+.. +++.||||++... ......+.+.+|+.++.++. ||||+++++++...
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 151 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHT 151 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEEE
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcC-CCCcCeEeeeEeec
Confidence 34566899999999999999999999976 7899999988643 23445577899999999998 99999999999876
Q ss_pred Ce-----EEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeec
Q 011647 141 HS-----VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 141 ~~-----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
+. .||||||++|++|.+++.. .+++..++.++.||+.||.|||++|||||||||+|||++. +.+||+||
T Consensus 152 ~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~----~~~kl~DF 225 (681)
T 2pzi_A 152 DRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE----EQLKLIDL 225 (681)
T ss_dssp CTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS----SCEEECCC
T ss_pred CCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC----CcEEEEec
Confidence 65 7999999999999887654 7999999999999999999999999999999999999953 37999999
Q ss_pred ccceecCCCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
|++...... ....||+.|+|||++.+.++.++|||||||++|+|++|..||.+.... ... ...+...
T Consensus 226 G~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------~~~-~~~~~~~ 292 (681)
T 2pzi_A 226 GAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD---------GLP-EDDPVLK 292 (681)
T ss_dssp TTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS---------SCC-TTCHHHH
T ss_pred ccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc---------ccc-ccccccc
Confidence 999876543 456799999999999877889999999999999999999988652110 000 0111112
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.++.+.++|.+||++||++||+..+++.|+|+..
T Consensus 293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999988753
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=316.14 Aligned_cols=234 Identities=14% Similarity=0.100 Sum_probs=162.7
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccCC-------hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-------RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
...++.|++|.+..++..-.|..||+|++.+..... ....+.+.+|+++|+++..|+||+++++++++++.+|
T Consensus 239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y 318 (569)
T 4azs_A 239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW 318 (569)
T ss_dssp ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence 346788888888888888889999999997653221 2234669999999999988999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||||+|++|.+++.+.+++++. .|+.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 319 LVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 319 LVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC--
T ss_pred EEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCC
Confidence 999999999999999999889875 478999999999999999999999999999 45778999999999876433
Q ss_pred -CccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 -DVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
....+.+||+.|||||++.+.+..++|+||+|++++++.++..++ ...+.. ... . ...+..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~-~~~---~-----~~~~~~l 455 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQ-EPV---E-----RWNFVLL 455 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHHT-SCG---G-----GCSHHHH
T ss_pred CccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhhc-CCC---C-----CCcHHHH
Confidence 334567899999999999998888999999999998887664432 111111 111 0 1124567
Q ss_pred HHHhcccCcCCCCCHHHHhcCCccc
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
...++..+|..|+.......|+|..
T Consensus 456 ~~~l~~~~~~~~~~~~~~~~~~~~~ 480 (569)
T 4azs_A 456 LALFEKKAKLPSAEQQRGATEQWII 480 (569)
T ss_dssp HHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred HHHHhCCCCCCCCChhhhccchhHH
Confidence 7777788888888777666666654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=260.86 Aligned_cols=185 Identities=18% Similarity=0.166 Sum_probs=143.2
Q ss_pred eecceecccCCeEEEEEEEcCCCceEEEEEecccccCChh-----cHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
...+.||+|+||+||+|.. .++.+++|........... ..+++.+|++++++++ ||||+++..++...+..|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccE
Confidence 4467899999999999943 4688999987553332221 2356899999999998 999995555555677789
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
+|||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++. .+||+|||+++.....
T Consensus 416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-----~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-----DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----SEEECCCTTCEECCCH
T ss_pred EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----eEEEEECccCEECCCc
Confidence 99999999999998865 5689999999999999999999999999999952 7999999999987543
Q ss_pred Cc--------cccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCC
Q 011647 225 DV--------FKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFW 270 (480)
Q Consensus 225 ~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~ 270 (480)
.. ....+||+.|||||++.. .|+..+|+||..+-..+-..++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 21 135689999999999864 47788899999988888887777663
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=217.02 Aligned_cols=147 Identities=17% Similarity=0.190 Sum_probs=116.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh---------------hcHHHHHHHHHHHHHccCCCCeeE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---------------DDVEDVRREVQIMHHLTGHRNIVE 132 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~~hp~iv~ 132 (480)
.|.+++.||+|+||.||+|.+ .+|+.||||++........ .....+.+|+.+++++. |++++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 455669999999999999999 7899999999864321110 13467899999999998 555555
Q ss_pred EEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeE
Q 011647 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (480)
Q Consensus 133 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl 212 (480)
+++ . +..++||||++|++|.+ +. ......++.||+.||.|||++||+||||||+|||++ ++.+||
T Consensus 169 ~~~---~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~vkl 233 (282)
T 1zar_A 169 VYA---W-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWI 233 (282)
T ss_dssp EEE---E-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEE
T ss_pred EEe---c-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcEEE
Confidence 443 2 55699999999999987 41 233557999999999999999999999999999995 667999
Q ss_pred eecccceecCCCCccccCCCCcccccccccc
Q 011647 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243 (480)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 243 (480)
+|||+++. +..|+|||++.
T Consensus 234 ~DFG~a~~------------~~~~~a~e~l~ 252 (282)
T 1zar_A 234 IDFPQSVE------------VGEEGWREILE 252 (282)
T ss_dssp CCCTTCEE------------TTSTTHHHHHH
T ss_pred EECCCCeE------------CCCCCHHHHHH
Confidence 99999874 34578999874
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-22 Score=187.15 Aligned_cols=141 Identities=13% Similarity=0.106 Sum_probs=108.4
Q ss_pred ceeecceecccCCeEEEEEEEcCCCce--EEEEEecccccCCh---------------------hcHHHHHHHHHHHHHc
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINR---------------------DDVEDVRREVQIMHHL 124 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~~~---------------------~~~~~~~~e~~~l~~l 124 (480)
.|.+.+.||+|+||.||+|.+..+|+. ||||++........ .....+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999778888 99998754321100 1123678999999999
Q ss_pred cCCCC--eeEEEEEEEeCCeEEEEEecCCC-C----chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCC
Q 011647 125 TGHRN--IVELKGAYEDRHSVNLIMDLCAG-G----ELFDRIIAKGHYSERAAANLCRQMVTVVHYCH-SMGVMHRDLKP 196 (480)
Q Consensus 125 ~~hp~--iv~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp 196 (480)
. |++ ++.+++. ...++||||+.+ | +|.+.... .++..+..++.||+.||.||| +.||+||||||
T Consensus 128 ~-~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp 199 (258)
T 1zth_A 128 K-EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSE 199 (258)
T ss_dssp H-HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred H-hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 8 765 3455543 356899999932 3 66554322 345577899999999999999 99999999999
Q ss_pred cceecccCCCCCCeeEeecccceec
Q 011647 197 ENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 197 ~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+|||++ . .++|+|||+|...
T Consensus 200 ~NILl~---~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYI---D--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEES---S--SEEECCCTTCEET
T ss_pred HHEEEc---C--cEEEEECcccccC
Confidence 999995 2 7999999999864
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=169.08 Aligned_cols=151 Identities=28% Similarity=0.436 Sum_probs=119.9
Q ss_pred cCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc
Q 011647 323 NHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402 (480)
Q Consensus 323 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 402 (480)
.|||.+-... ...++...+++++++|...+++++..+..+...++.+++..++++|..+|.|++|.|+.+||..++..+
T Consensus 8 ~~~~~~~~~~-~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 86 (197)
T 3pm8_A 8 SSGRENLYFQ-GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86 (197)
T ss_dssp ---------C-CSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred cchHhhhccC-CCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh
Confidence 4899987664 345567778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
|..++..+++.+|..+|.|++|.|+|+||+.++........++.+..+|+.+|+|++|+|+.+|++.+...+
T Consensus 87 g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 87 GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp C----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 999999999999999999999999999999988777667778899999999999999999999999888765
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.81 E-value=9.5e-20 Score=162.37 Aligned_cols=148 Identities=30% Similarity=0.425 Sum_probs=126.9
Q ss_pred cCCcccccCCCCCCcccHHHHHHHHhhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc
Q 011647 323 NHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402 (480)
Q Consensus 323 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 402 (480)
.|||+-.... ...++...+++++++|...+++++..+..+...++.+++..++++|..+|.|++|.|+.+||..+++.+
T Consensus 3 ~~~~~~~~~~-~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 81 (191)
T 3k21_A 3 HHHHHSSGRE-NLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD 81 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred CCccccCCcc-ccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc
Confidence 5777765443 345677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
|..++ .+++.+|..+|.|++|.|+|+||+.++.... ....+.+..+|+.+|+|++|+|+.+|++.+...
T Consensus 82 g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 82 GLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp TCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred CCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 98888 8999999999999999999999999876544 366788999999999999999999999988765
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.6e-20 Score=177.47 Aligned_cols=142 Identities=16% Similarity=0.192 Sum_probs=101.9
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-----------ChhcH--------HHHHHHHHHHHHccCCC
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----------NRDDV--------EDVRREVQIMHHLTGHR 128 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~--------~~~~~e~~~l~~l~~hp 128 (480)
.|.+++.||.|+||.||+|.+. +|+.||||+++..... ..... -...+|...|.++. ++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence 4899999999999999999985 5899999997642211 00000 11245777777775 44
Q ss_pred Ce--eEEEEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCC
Q 011647 129 NI--VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (480)
Q Consensus 129 ~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 206 (480)
++ ...+++ . ..+|||||++|++|..+. ..+.+..++.||+.+|.+||++|||||||||.|||++.+++
T Consensus 174 gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 174 GFPVPEPIAQ--S--RHTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp TCSCCCEEEE--E--TTEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred CCCCCeeeec--c--CceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence 44 333332 2 237999999998885532 22345678899999999999999999999999999975332
Q ss_pred C-------CCeeEeecccceec
Q 011647 207 D-------SPLKATDFGLSVFF 221 (480)
Q Consensus 207 ~-------~~ikl~Dfg~a~~~ 221 (480)
. ..+.|+||+.+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 1 13789999988753
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=144.96 Aligned_cols=132 Identities=24% Similarity=0.451 Sum_probs=118.1
Q ss_pred ccHHHHHHHHhhhhhhHHHHHHHHHHhhhhh--HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHH
Q 011647 338 LDIAVLTRMKQFRAMNKLKKVALKVIAENLS--EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLM 415 (480)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~ 415 (480)
+...++.++++|...+++++..+..+...++ +++...++++|..+|.|++|.|+.+||..+++.+|.. ..++..+|
T Consensus 2 ~~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~ 79 (180)
T 3mse_B 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRIL 79 (180)
T ss_dssp CCHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHH
Confidence 3456789999999999999999999999887 8999999999999999999999999999999999865 68899999
Q ss_pred HhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 416 EAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 416 ~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..+|.|++|.|+|+||+.++..... ...+.+..+|+.+|+|++|+|+.+|++.+..
T Consensus 80 ~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 135 (180)
T 3mse_B 80 QALDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH 135 (180)
T ss_dssp HHHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT
T ss_pred HHhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc
Confidence 9999999999999999998875442 3347899999999999999999999988764
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.9e-17 Score=142.47 Aligned_cols=127 Identities=61% Similarity=0.884 Sum_probs=112.9
Q ss_pred hhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCccee
Q 011647 348 QFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427 (480)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~ 427 (480)
+|...+.+++..+..+...++++++..++++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+
T Consensus 2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~ 81 (166)
T 2aao_A 2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID 81 (166)
T ss_dssp ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBC
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEc
Confidence 56777888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 428 ~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
|+||+.++.........+.+..+|+.+|+|++|.|+.+|++.+...+
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 128 (166)
T 2aao_A 82 YKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF 128 (166)
T ss_dssp HHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC-
T ss_pred HHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 99999998765555566789999999999999999999998886544
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.7e-18 Score=149.35 Aligned_cols=136 Identities=31% Similarity=0.453 Sum_probs=123.3
Q ss_pred cccHHHHHHHHhhhhhhHHHHHHHHHHhhhh-hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc-----------CC
Q 011647 337 PLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-----------GT 404 (480)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-----------~~ 404 (480)
++...+++++++|...+.+++..+..+...+ ++++...++++|..+|.|++|.|+.+||..++..+ +.
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 82 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 82 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence 3556788999999999999999999999887 88999999999999999999999999999999987 66
Q ss_pred CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
.++..++..+|..+|.|++|.|+|+||+.++.........+.+..+|+.+|.|++|.|+.+|++.+..
T Consensus 83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 67788999999999999999999999999987766667788999999999999999999999987743
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-17 Score=159.10 Aligned_cols=112 Identities=32% Similarity=0.497 Sum_probs=100.9
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~ 442 (480)
.++++++++++++++|+.||.|++|.|+.+||..+|+.+|..+++.+++.+|..+|.|++|.|+|+||+.++... ....
T Consensus 293 ~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 293 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp CBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred HhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999999999999999999999999999999999999999999999999987653 3445
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.++++..+|+.||+|++|+|+.+|++++...++
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lG 405 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 405 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC
Confidence 668899999999999999999999999988765
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.4e-18 Score=147.46 Aligned_cols=111 Identities=35% Similarity=0.476 Sum_probs=101.6
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-cccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~~~ 443 (480)
++++++++.+++++|..||.|++|.|+.+||..+++.+|..++..++..++..+|.|++|.|+|.||+.++.... ....
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 468899999999999999999999999999999999999999999999999999999999999999999876543 3456
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
++++..+|+.||+|++|+|+.+|++++...++
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 114 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 78899999999999999999999999887554
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-17 Score=138.91 Aligned_cols=107 Identities=26% Similarity=0.467 Sum_probs=96.4
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccccHHHH
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVEREEHL 447 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~~~~~ 447 (480)
+++..+++++|..||.|++|.|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+.++... ....+.+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l 81 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999999999987543 223456789
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+|+.||+|++|+|+.+|++.+...++
T Consensus 82 ~~~F~~~D~d~~G~I~~~el~~~l~~~g 109 (143)
T 2obh_A 82 LKAFKLFDDDETGKISFKNLKRVAKELG 109 (143)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 9999999999999999999999887664
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-17 Score=140.15 Aligned_cols=110 Identities=26% Similarity=0.419 Sum_probs=101.6
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~ 444 (480)
.++++++++++++|..||.|++|.|+.+||..+++.+|..++..++..++..+|.+++|.|+|.||+..+.. ......+
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence 478899999999999999999999999999999999999999999999999999999999999999997654 3445667
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.||+|++|+|+.+|++.+...++
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g 113 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLG 113 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcC
Confidence 8899999999999999999999999988765
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-17 Score=143.19 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=96.9
Q ss_pred hhhHHHHhhHHHhhcccCC--CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc---c
Q 011647 366 NLSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---R 440 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~---~ 440 (480)
+++++++++++++|..||. |++|.|+..||..+|+.+|..+++.++..++. .|.+++|.|+|+||+.++.... .
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence 5789999999999999995 89999999999999999999999999998764 4788899999999999875432 3
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
....+++..+|+.||+|++|+|+.+|+++++..++
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 115 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSS
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhC
Confidence 45678899999999999999999999999987765
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-16 Score=135.25 Aligned_cols=110 Identities=34% Similarity=0.513 Sum_probs=99.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~~ 444 (480)
.+++++...++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.|++|.|+|+||+.++... ......
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 4677888999999999999999999999999999999999999999999999999999999999999987643 233456
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 113 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLG 113 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 7899999999999999999999998887654
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.5e-16 Score=141.65 Aligned_cols=124 Identities=21% Similarity=0.240 Sum_probs=112.1
Q ss_pred HHhhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcc
Q 011647 346 MKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425 (480)
Q Consensus 346 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~ 425 (480)
...+.....+++.+..-+...++.++...++++|..+|.|++|.|+.+||..+++.+|..++..+++.++..+|.|++|.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~ 103 (220)
T 3sjs_A 24 ACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGH 103 (220)
T ss_dssp HHHHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSC
T ss_pred hhccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCc
Confidence 34566666777777777788899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 426 IDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 426 I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
|+|+||+.++... +.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 104 I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g 147 (220)
T 3sjs_A 104 ISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLG 147 (220)
T ss_dssp BCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhC
Confidence 9999999987654 5799999999999999999999999888765
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-16 Score=131.47 Aligned_cols=107 Identities=26% Similarity=0.415 Sum_probs=97.7
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccHHHH
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHL 447 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~~~~ 447 (480)
+++...++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.|++|.|+|+||+.++.. .......+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL 81 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence 567888999999999999999999999999999999999999999999999999999999999998765 3345577889
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+|+.+|+|++|.|+.+|++.+...++
T Consensus 82 ~~~F~~~D~d~~G~i~~~el~~~l~~~g 109 (142)
T 2bl0_C 82 RQAFRTFDPEGTGYIPKAALQDALLNLG 109 (142)
T ss_dssp HHHHHHTCCSSCSCEEHHHHHHHHHHSS
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 9999999999999999999999887653
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.6e-16 Score=131.71 Aligned_cols=113 Identities=35% Similarity=0.493 Sum_probs=100.5
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-ccc
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRV 441 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~ 441 (480)
|...+++++...++++|..+|.+++|.|+.+||..++..+|..++..++..++..+|.|++|.|+|+||+.++... ...
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 80 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCN 80 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTH
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCC
Confidence 3467889999999999999999999999999999999999999999999999999999999999999999987653 233
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
...+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 114 (147)
T 4ds7_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114 (147)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcC
Confidence 4567899999999999999999999999887654
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.63 E-value=3e-16 Score=134.13 Aligned_cols=106 Identities=25% Similarity=0.407 Sum_probs=94.7
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~~ 444 (480)
.++++++.+++++|..||.|++|.|+..||..+|+.+|..++..++..++. +++|.|+|.+|+.++... ....++
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~~ 84 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDPE 84 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCCH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhcccccH
Confidence 589999999999999999999999999999999999999999999887765 456789999999987654 344578
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.||+|++|+|+.+|+++++..++
T Consensus 85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 115 (153)
T 3i5g_B 85 DALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115 (153)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHSSS
T ss_pred HHHHHHHhccccCCCCeEeHHHHHHHHHHcC
Confidence 8999999999999999999999999987654
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.62 E-value=6.7e-16 Score=132.61 Aligned_cols=111 Identities=23% Similarity=0.349 Sum_probs=99.9
Q ss_pred hhhhHHHHhhHHHhhcccC-CCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc--
Q 011647 365 ENLSEEEIMGLKEMFKSMD-TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV-- 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D-~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~-- 441 (480)
..++++++..++++|..+| .+++|.|+.+||..+++.+|..++..++..+|..+|.|++|.|+|+||+.++......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 3577888999999999999 9999999999999999999999999999999999999999999999999987643322
Q ss_pred ---ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 442 ---EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 442 ---~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
...+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 121 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELD 121 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhC
Confidence 4556799999999999999999999999887764
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=131.62 Aligned_cols=112 Identities=23% Similarity=0.363 Sum_probs=101.8
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~ 442 (480)
...++++++..++++|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.|++|.|+|+||+.++... ....
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 93 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD 93 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence 356888999999999999999999999999999999999999999999999999999999999999999987653 3345
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~ 126 (161)
T 3fwb_A 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG 126 (161)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhC
Confidence 578899999999999999999999999887654
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.3e-16 Score=132.19 Aligned_cols=110 Identities=24% Similarity=0.310 Sum_probs=99.1
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccc-
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE- 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~- 442 (480)
...++++++..++++|..+|.+++|.|+.+||..++..+|..++..++..++..+|.|++|.|+|+||+.++.......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 81 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET 81 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence 3567889999999999999999999999999999999999999999999999999999999999999999875432222
Q ss_pred ----cHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 443 ----REEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 443 ----~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
..+.+..+|+.+|+|++|.|+.+|++.+...
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3578999999999999999999999998877
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-16 Score=133.30 Aligned_cols=113 Identities=25% Similarity=0.336 Sum_probs=100.0
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCC-CCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc--
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-- 439 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-- 439 (480)
+...++++++..++++|..+|.|+ +|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 346688899999999999999999 99999999999999999999999999999999999999999999999876543
Q ss_pred --ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 440 --RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 440 --~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.....+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g 125 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 345677899999999999999999999988765443
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.61 E-value=9.1e-16 Score=134.74 Aligned_cols=112 Identities=35% Similarity=0.511 Sum_probs=97.7
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-ccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~~ 442 (480)
...++++++..++++|..+|.|++|.|+.+||..++..+|..++..+++.+|..+|.|++|.|+|+||+.++.... ...
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~ 81 (179)
T 2f2o_A 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 81 (179)
T ss_dssp ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence 3457788899999999999999999999999999999999999999999999999999999999999999876532 334
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g 114 (179)
T 2f2o_A 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114 (179)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 567899999999999999999999998887654
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-15 Score=132.41 Aligned_cols=111 Identities=34% Similarity=0.494 Sum_probs=100.0
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-ccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~ 443 (480)
..+++++...++++|..+|.|++|.|+.+||..+++.+|..++..++..+|..+|.|++|.|+|+||+.++... .....
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 35788899999999999999999999999999999999999999999999999999999999999999987653 23344
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 131 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELG 131 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 67899999999999999999999999887654
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.3e-16 Score=132.26 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=92.3
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhh-cCCCCcceeHHHHHHHHccc------ccccc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA-DVDGNGTIDYIEFITATMHM------NRVER 443 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~~g~I~~~eF~~~~~~~------~~~~~ 443 (480)
++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+ |.|++|.|+|+||+.++... .....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 81 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK 81 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence 346788999999999999999999999999999999999999999999 99999999999999987765 44566
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 113 (148)
T 1m45_A 82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 113 (148)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHHST
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 78899999999999999999999999887654
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-15 Score=130.03 Aligned_cols=114 Identities=29% Similarity=0.363 Sum_probs=101.2
Q ss_pred HHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc-
Q 011647 362 VIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR- 440 (480)
Q Consensus 362 ~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~- 440 (480)
.+...++++++..++++|..+|.|++|.|+..||..++..+|..++..++..+|..+|.|++|.|+|+||+.++.....
T Consensus 9 ~~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 88 (162)
T 1top_A 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88 (162)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH
T ss_pred HhhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcc
Confidence 3456789999999999999999999999999999999999999999999999999999999999999999998765322
Q ss_pred cc---cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 441 VE---REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 441 ~~---~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.. ..+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 89 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g 126 (162)
T 1top_A 89 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred ccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 22 567799999999999999999999998876543
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.1e-16 Score=139.15 Aligned_cols=108 Identities=58% Similarity=0.828 Sum_probs=97.5
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~ 445 (480)
.++++++..++++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++.........+
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~ 82 (188)
T 1s6i_A 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREE 82 (188)
T ss_dssp SSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHH
Confidence 46777888999999999999999999999999999999999999999999999999999999999999887655445556
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+..+|+.+|+|++|+|+.+|++.+...
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~ 110 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQACKD 110 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTTTT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 7999999999999999999999887644
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-15 Score=126.42 Aligned_cols=108 Identities=16% Similarity=0.242 Sum_probs=98.5
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhh---cCCCCcceeHHHHHHHHccc---cc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA---DVDGNGTIDYIEFITATMHM---NR 440 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~---d~~~~g~I~~~eF~~~~~~~---~~ 440 (480)
++++++.+++++|..+|.+++|.|+.+||..++..+|..++..++..++..+ |.|+ |.|+|+||+.++... ..
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 5778899999999999999999999999999999999999999999999999 9999 999999999987653 33
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
....+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 115 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 115 (149)
T ss_pred cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhC
Confidence 45678899999999999999999999999988765
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.59 E-value=9e-16 Score=131.54 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=98.6
Q ss_pred hhhHHHHhhHHHhhcccCC--CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc--c
Q 011647 366 NLSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR--V 441 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~--~ 441 (480)
.++++++..++++|..+|. |++|.|+.+||..+++.+|..++..++..+ ..+|.|++|.|+|+||+.++..... .
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 4678889999999999999 999999999999999999999999999999 9999999999999999998765433 5
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
...+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 114 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALG 114 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSS
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 6678999999999999999999999999887654
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.56 E-value=5.7e-15 Score=129.05 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=93.8
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhh----hhcccCCCCCHHHHH-----------HHHHhhcCCCCcceeHHHHH
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKA----GLPKLGTRLSESEVR-----------QLMEAADVDGNGTIDYIEFI 432 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~----~l~~~~~~~~~~~~~-----------~~~~~~d~~~~g~I~~~eF~ 432 (480)
+++++..++++|..+|.|++|.|+.+||.. +++.+|..++..++. .+|..+|.|++|.|+|+||+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~ 81 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 567788999999999999999999999999 688899999988877 78999999999999999999
Q ss_pred HHHcccccccc--------HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 433 TATMHMNRVER--------EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 433 ~~~~~~~~~~~--------~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.++........ .+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g 132 (176)
T 1nya_A 82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG 132 (176)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT
T ss_pred HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC
Confidence 98765433222 36689999999999999999999998876643
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.55 E-value=8e-16 Score=131.02 Aligned_cols=110 Identities=16% Similarity=0.298 Sum_probs=89.7
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCC--CCcceeHHHHHHHHccccc---
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNGTIDYIEFITATMHMNR--- 440 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~I~~~eF~~~~~~~~~--- 440 (480)
.++++++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++..+|.| ++|.|+|+||+.++.....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 46788889999999999999999999999999999999999999999999999999 9999999999998765432
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
....+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 117 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLG 117 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSS
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 23456788899999999999999999999887654
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=8.4e-15 Score=131.41 Aligned_cols=105 Identities=28% Similarity=0.381 Sum_probs=91.4
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
..++...++++|..+|.|++|.|+.+||..+++.+|..++..+++.+|..+|.|++|.|+|+||+.++.........+.+
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~ 111 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI 111 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999998776656677889
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..+|+.+|+|++|+|+.+|+..+..
T Consensus 112 ~~~F~~~D~d~~G~I~~~El~~~l~ 136 (204)
T 3e3r_A 112 AAAFAKLDRSGDGVVTVDDLRGVYS 136 (204)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHCC
T ss_pred HHHHHHhCcCCCCeEeHHHHHHHHc
Confidence 9999999999999999999988765
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.5e-15 Score=125.07 Aligned_cols=105 Identities=23% Similarity=0.381 Sum_probs=93.0
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccHH
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREE 445 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~~ 445 (480)
++++++..++++|..+|.|++|.|+.+||..+++.+|..++..++..++.. ++|.|+|+||+.++.. .......+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 467888999999999999999999999999999999999999998888765 7899999999998874 34455678
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g 106 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMG 106 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSS
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcC
Confidence 899999999999999999999998886543
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-16 Score=151.83 Aligned_cols=166 Identities=19% Similarity=0.284 Sum_probs=114.3
Q ss_pred CCCHHHHHHHHHhc---ccCcCCCCCHHHHhcC------CcccccCCCC-------------------C----CcccHHH
Q 011647 295 NISSSAKDIVKKML---HADPKERLSAAEVLNH------PWMRVDGDAS-------------------D----KPLDIAV 342 (480)
Q Consensus 295 ~~~~~~~~li~~~L---~~dp~~R~t~~~~l~h------~~~~~~~~~~-------------------~----~~~~~~~ 342 (480)
.++.++.+|.++++ ..+|++|.+.++.+.| +|+....+.. . ......+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~v 95 (323)
T 1ij5_A 16 KVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASL 95 (323)
T ss_dssp HHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHH
Confidence 35677888988888 8899999999999998 8887652111 0 0001112
Q ss_pred HHHHH-hhhhhhHHHHHHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCC
Q 011647 343 LTRMK-QFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD 421 (480)
Q Consensus 343 ~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~ 421 (480)
+.+++ +|...+.+.+ +...++++++..+..+|..||.|++|.|+.+||..+|..+|..++..++..++..+|.|
T Consensus 96 l~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 96 LKDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC
Confidence 33333 3434444433 33578889999999999999999999999999999999999999999999999999888
Q ss_pred CCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 422 ~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
++|.|+|.+|+.+. ...+.+..+|+.+|.|++|+|+.+|+..+.
T Consensus 171 ~~G~I~f~ef~~l~------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l 214 (323)
T 1ij5_A 171 TKGRMSYITLVAVA------NDLAALVADFRKIDTNSNGTLSRKEFREHF 214 (323)
T ss_dssp CSSTHHHHHHTTSH------HHHHTSCCCHHHHCTTCCSEECHHHHHHHH
T ss_pred CCCcCcHHHHHhhh------hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 88888888887643 223456667777777777777777776665
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-14 Score=120.70 Aligned_cols=100 Identities=23% Similarity=0.291 Sum_probs=88.0
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc---cccccccHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM---HMNRVEREEHLYKAF 451 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~---~~~~~~~~~~~~~~F 451 (480)
++++|..+|.+++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+.++. ......+.+++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999885 222234456699999
Q ss_pred HHhcCCCCCceehhhhHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+.+|+|++|.|+.+|++.+...+
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~ 104 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTT
T ss_pred HHHCCCCCCccCHHHHHHHHHHh
Confidence 99999999999999998887644
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=121.41 Aligned_cols=98 Identities=22% Similarity=0.321 Sum_probs=89.5
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc--cccccHHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM--NRVEREEHLYKAFE 452 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~--~~~~~~~~~~~~F~ 452 (480)
++++|..+|.|++|.|+.+||..+++.+|..++..++..++.. |++|.|+|+||+.++... ......+.+..+|+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~ 83 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR 83 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence 8999999999999999999999999999999999999999988 789999999999998765 44566788999999
Q ss_pred HhcCCCCCceehhhhHHHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+|+|++|+|+.+|++.+...++
T Consensus 84 ~~D~d~~G~i~~~e~~~~l~~~g 106 (145)
T 2bl0_B 84 ALDKEGNGTIQEAELRQLLLNLG 106 (145)
T ss_dssp HHCSSSSSEEEHHHHHHHHHHSS
T ss_pred HhCCCCCCeEcHHHHHHHHHHcC
Confidence 99999999999999999887654
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.4e-15 Score=131.61 Aligned_cols=112 Identities=19% Similarity=0.217 Sum_probs=89.5
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHh-----hhhcccCCCCCHH-----HHHHHHHhhcCCCCcceeHHHHHH
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELK-----AGLPKLGTRLSES-----EVRQLMEAADVDGNGTIDYIEFIT 433 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~-----~~l~~~~~~~~~~-----~~~~~~~~~d~~~~g~I~~~eF~~ 433 (480)
...++++++..++++|..+|.|++|.|+.+||. .+++.+|..++.. +++.+|..+|.|++|.|+|+||+.
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~ 90 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD 90 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence 344588999999999999999999999999999 7888899888776 688899999999999999999999
Q ss_pred HHcccccc-------ccHHHHH----HHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 434 ATMHMNRV-------EREEHLY----KAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 434 ~~~~~~~~-------~~~~~~~----~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
++...... ...+.++ .+|+.+|+|++|+|+.+|++.+...++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g 143 (195)
T 1qv0_A 91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISG 143 (195)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHS
T ss_pred HHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC
Confidence 86543211 1112233 899999999999999999999887764
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.9e-14 Score=120.94 Aligned_cols=102 Identities=30% Similarity=0.528 Sum_probs=90.5
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-ccccHHHH
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVEREEHL 447 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~~~~~~~ 447 (480)
++++..++++|..+|.|++|.|+.+|| ..+..++..+ ++..+|..+|.|++|.|+|+||+.++.... .....+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 567889999999999999999999999 6788877654 788899999999999999999999987643 34667889
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
..+|+.+|+|++|.|+.+|++.+...+
T Consensus 78 ~~~F~~~D~d~~G~i~~~e~~~~l~~~ 104 (155)
T 3ll8_B 78 RFAFRIYDMDKDGYISNGELFQVLKMM 104 (155)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 999999999999999999999988874
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-14 Score=123.12 Aligned_cols=108 Identities=21% Similarity=0.386 Sum_probs=94.0
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~ 442 (480)
...+++++...++++|..+|.|++|.|+.+||..+++.+|..++..++..++. +++|.|+|+||+.++... ....
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~ 84 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD 84 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCC
Confidence 35678889999999999999999999999999999999999999999998884 478999999999987643 3445
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 117 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 117 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhC
Confidence 678899999999999999999999999887653
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.7e-15 Score=132.23 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=90.7
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCC--CCCHHHHHHHH-------HhhcCCCCcceeHHHHHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--RLSESEVRQLM-------EAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~-------~~~d~~~~g~I~~~eF~~~~ 435 (480)
..++++++..++++|..+|.|++|.|+.+||..++..+|. .++..++..++ ..+|.|++|.|+|+||+.++
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~ 107 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN 107 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 5678888999999999999999999999999999999987 89999999999 99999999999999999987
Q ss_pred c---------cc-cccccHHH-HHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 436 M---------HM-NRVEREEH-LYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 436 ~---------~~-~~~~~~~~-~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
. .. ......++ +..+|+.+|+|++|+|+.+|++.+...++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 158 (208)
T 2hpk_A 108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD 158 (208)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 5 22 12233444 78999999999999999999999887654
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-14 Score=124.05 Aligned_cols=107 Identities=24% Similarity=0.385 Sum_probs=94.5
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCC-CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~ 442 (480)
..+++++...++++|..+|.|++|.|+.+||..+++.+|. .++..++..++... +|.|+|+||+.++... ....
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~ 92 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD 92 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence 4678889999999999999999999999999999999999 99999999998764 7999999999987653 3345
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+.+..+|+.||+|++|+|+.+|++.+...++
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 125 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG 125 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcC
Confidence 678899999999999999999999999887654
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.3e-14 Score=128.73 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=93.0
Q ss_pred hhhhHHHHhhHHHhhccc-CCCCCCcccHHHHhhhhccc----CCCCCHHHHHHHH-----------HhhcCCCCcceeH
Q 011647 365 ENLSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKL----GTRLSESEVRQLM-----------EAADVDGNGTIDY 428 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~-D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~-----------~~~d~~~~g~I~~ 428 (480)
..+++++..+++++|..+ |.|++|.|+.+||..++..+ |..++..++..++ ..+|.|++|.|+|
T Consensus 4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~ 83 (191)
T 2ccm_A 4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK 83 (191)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence 346778888999999999 99999999999999999988 8888888888888 8999999999999
Q ss_pred HHHHHHHcccc---------ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 429 IEFITATMHMN---------RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 429 ~eF~~~~~~~~---------~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+||+.++.... .....+.+..+|+.+|+|++|.|+.+|++.+...+
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~ 138 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY 138 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 99998876532 12334678899999999999999999998877544
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.52 E-value=9.8e-15 Score=129.42 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=93.1
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHh-----hhhcccCCCCCHH-----HHHHHHHhhcCCCCcceeHHHHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELK-----AGLPKLGTRLSES-----EVRQLMEAADVDGNGTIDYIEFITA 434 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~-----~~l~~~~~~~~~~-----~~~~~~~~~d~~~~g~I~~~eF~~~ 434 (480)
...+++++.+++++|..+|.|++|.|+.+||. .+++.+|..++.. +++.+|..+|.|++|.|+|+||+.+
T Consensus 8 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 87 (191)
T 1uhk_A 8 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG 87 (191)
T ss_dssp CTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence 34578888999999999999999999999999 8899999888877 6899999999999999999999998
Q ss_pred Hcccccc-------ccHHHHH----HHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 435 TMHMNRV-------EREEHLY----KAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 435 ~~~~~~~-------~~~~~~~----~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+...... ...+.++ .+|+.+|+|++|+|+.+|++.+...++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 139 (191)
T 1uhk_A 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAG 139 (191)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC
Confidence 6543211 1112233 899999999999999999999887765
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-14 Score=129.08 Aligned_cols=105 Identities=18% Similarity=0.326 Sum_probs=94.1
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc------
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------ 439 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------ 439 (480)
.++++++..++++|..+|.|++|.|+.+||..+ ..+|..++ ++.+|..+|.|++|.|+|+||+.++....
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~ 97 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED 97 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence 578889999999999999999999999999999 87887665 88899999999999999999999887654
Q ss_pred -----------ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 440 -----------RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 440 -----------~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.....+.+..+|+.+|+|++|+|+.+|++.+...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 143 (202)
T 2bec_A 98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143 (202)
T ss_dssp HC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHS
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence 34556789999999999999999999999988765
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=126.98 Aligned_cols=106 Identities=24% Similarity=0.332 Sum_probs=96.3
Q ss_pred HHHhhHHHhhcccCCC-CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 370 EEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
-..++++++|..||.+ ++|.|+.+||..++..+|...+..+++.+|..+|.|++|.|+|+||+.++.........+.+.
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 98 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence 3445678899999999 899999999999999999988999999999999999999999999999987665566778999
Q ss_pred HHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+|+.+|+|++|+|+.+|++.+...+.
T Consensus 99 ~~F~~~D~d~~G~I~~~E~~~~l~~~~ 125 (204)
T 1jba_A 99 WTFKIYDKDRNGCIDRQELLDIVESIY 125 (204)
T ss_dssp HHHHHHCSSCSSCBCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 999999999999999999999988774
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=120.36 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=89.1
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc---cccHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR---VEREEHLY 448 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~---~~~~~~~~ 448 (480)
+..++++|..+|.|++|.|+.+||..+++.+|..++..++..++. +++|.|+|+||+.++..... ....+.+.
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 79 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence 356889999999999999999999999999999999999998886 88999999999999876532 23458899
Q ss_pred HHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+|+.+|+|++|+|+.+|++.+...++
T Consensus 80 ~~F~~~D~d~~G~i~~~el~~~l~~~g 106 (140)
T 1ggw_A 80 KGFQVFDKDATGMIGVGELRYVLTSLG 106 (140)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcEeHHHHHHHHHHcC
Confidence 999999999999999999999988775
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.50 E-value=7.9e-15 Score=134.02 Aligned_cols=113 Identities=21% Similarity=0.223 Sum_probs=96.5
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhh-hhcccCCCCCHHHHHHHHHhh---------cCCCCcceeHHHHH
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA-GLPKLGTRLSESEVRQLMEAA---------DVDGNGTIDYIEFI 432 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~-~l~~~~~~~~~~~~~~~~~~~---------d~~~~g~I~~~eF~ 432 (480)
+...++++++..++++|..||.|++|.|+.+||.. +++.+|..++..++..++..+ |.|++|.|+|+||+
T Consensus 41 l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~ 120 (226)
T 2lvv_A 41 IPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFL 120 (226)
T ss_dssp SCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHH
T ss_pred hchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHH
Confidence 44567899999999999999999999999999998 667778887777777777766 99999999999999
Q ss_pred HHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 433 TATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.++.........+.+..+|+.||+|++|+|+.+|++.+...+.
T Consensus 121 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~ 163 (226)
T 2lvv_A 121 EFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLK 163 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHh
Confidence 9654444344567899999999999999999999999998874
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.49 E-value=6.4e-14 Score=138.44 Aligned_cols=111 Identities=34% Similarity=0.518 Sum_probs=98.5
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-ccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~ 443 (480)
..++++++..++++|+.+|.|++|.|+.+||..+|..++..++.++++.+|..+|.|++|.|+|+||+.++... .....
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 45677888999999999999999999999999999999999999999999999999999999999999988653 33456
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG 415 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 415 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC
Confidence 77899999999999999999999999987764
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.1e-14 Score=123.31 Aligned_cols=99 Identities=23% Similarity=0.253 Sum_probs=87.6
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHH
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~ 449 (480)
+..+++++|..+|.|++|.|+.+||..+++.+| ..++..+++.++..+|.|++|.|+|+||+.++... +.+..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~ 78 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQN 78 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHH
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHH
Confidence 346788999999999999999999999999998 77899999999999999999999999999986533 47889
Q ss_pred HHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+|+.+|+|++|+|+.+|++.+...++
T Consensus 79 ~F~~~D~d~~G~i~~~el~~~l~~~g 104 (172)
T 2znd_A 79 VFRTYDRDNSGMIDKNELKQALSGFG 104 (172)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred HHHHHCCCCCCccCHHHHHHHHHHcC
Confidence 99999999999999999988876653
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.9e-14 Score=124.44 Aligned_cols=98 Identities=17% Similarity=0.200 Sum_probs=89.0
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhccc-C-------CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-G-------TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~-------~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 442 (480)
++.+++++|..+| |++|.|+.+||..+++.+ | ..++..+++.++..+|.|++|.|+|+||+.++...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence 5678999999999 999999999999999997 6 67889999999999999999999999999987643
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 77 --~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 107 (173)
T 1alv_A 77 --KKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107 (173)
T ss_dssp --HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHT
T ss_pred --HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcC
Confidence 5799999999999999999999998887664
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-13 Score=128.21 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=112.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
..|.+...+|.|+.+.||++... ++.+++|+....... ....+.+|+.+++.+..+..++++++++...+..|+|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 45888889999999999999754 578999998643211 1245889999999997678889999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS---------------------------------------- 186 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---------------------------------------- 186 (480)
||+++|.+|.+.+. +......++.+++.+|..||+
T Consensus 89 ~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp EECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999876521 222345788899999999998
Q ss_pred -------------------cCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 187 -------------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 187 -------------------~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.+++|+|++|.||+++ ++..+.|+||+.+..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhccc
Confidence 4589999999999994 334467999998754
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-14 Score=132.36 Aligned_cols=115 Identities=19% Similarity=0.261 Sum_probs=95.2
Q ss_pred HHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcc-cCCCCCHHHHHHHHHhh---------cCCCCcceeHHHH
Q 011647 362 VIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAA---------DVDGNGTIDYIEF 431 (480)
Q Consensus 362 ~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~---------d~~~~g~I~~~eF 431 (480)
.+...++++++..++++|..+|.|++|.|+.+||..++.. +|..++..++..++..+ +.|++|.|+|+||
T Consensus 37 ~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF 116 (219)
T 3cs1_A 37 AIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEF 116 (219)
T ss_dssp HSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCH
T ss_pred HhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHH
Confidence 3445688899999999999999999999999999999987 78877766666654432 3478999999999
Q ss_pred HHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 432 ITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+.++.........+.+..+|+.||+|++|+|+.+|++.+...++.
T Consensus 117 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~ 161 (219)
T 3cs1_A 117 LEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEA 161 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcc
Confidence 988654443445678999999999999999999999999988875
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.5e-14 Score=126.70 Aligned_cols=106 Identities=22% Similarity=0.410 Sum_probs=95.3
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-cccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~ 443 (480)
..++.+++..|+++|..||.|++|.|+..||..+|..+|..++..++..++..+ +|.|+|+||+.++.. ......
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~ 124 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE 124 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence 457888889999999999999999999999999999999999999999998877 899999999998864 344566
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+.+..+|+.||+|++|+|+.+|++.+. .++
T Consensus 125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g 155 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWG 155 (196)
T ss_dssp HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcC
Confidence 7899999999999999999999999988 654
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.47 E-value=7.4e-14 Score=122.88 Aligned_cols=107 Identities=12% Similarity=0.140 Sum_probs=92.5
Q ss_pred hhHHHHhhHHHhhccc-CCCCCCcccHHHHhhhhcccC----CCCCHHHHHHH-----------HHhhcCCCCcceeHHH
Q 011647 367 LSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLG----TRLSESEVRQL-----------MEAADVDGNGTIDYIE 430 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~-D~~~~g~i~~~e~~~~l~~~~----~~~~~~~~~~~-----------~~~~d~~~~g~I~~~e 430 (480)
+++++...++++|..+ |.|++|.|+.+||..++..++ ..++..++..+ |..+|.|++|.|+|+|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 4567788999999999 999999999999999999988 78888888755 9999999999999999
Q ss_pred HHHHHccccc---------cccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 431 FITATMHMNR---------VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 431 F~~~~~~~~~---------~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
|+.++..... ....+.+..+|+.+|+|++|.|+.+|++.+...
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 133 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 9998754321 224578999999999999999999999887643
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.3e-14 Score=124.47 Aligned_cols=97 Identities=24% Similarity=0.264 Sum_probs=79.4
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
..+++++|..+|.|++|.|+.+||..++..+|..++..+++.+|..+|.|++|.|+|+||+.++... +.+..+|
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F 99 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGF 99 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHH
Confidence 3567888888999999999999999988778888888888889999999889999999998876432 4677888
Q ss_pred HHhcCCCCCceehhhhHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+.+|+|++|.|+.+|++.+...+
T Consensus 100 ~~~D~d~~G~i~~~e~~~~l~~~ 122 (191)
T 1y1x_A 100 RKRDSSGDGRLDSNEVRAALLSS 122 (191)
T ss_dssp HHHCTTSSSCBCHHHHHHHHHTT
T ss_pred HHhCCCCCCeEcHHHHHHHHHHh
Confidence 88888888888888887776543
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6e-14 Score=122.29 Aligned_cols=105 Identities=18% Similarity=0.245 Sum_probs=89.0
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC----CCCCHHH-H--------HHHHHhhcCCCCcceeHHHHHHH
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG----TRLSESE-V--------RQLMEAADVDGNGTIDYIEFITA 434 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~~~-~--------~~~~~~~d~~~~g~I~~~eF~~~ 434 (480)
+++++.+++++|..+|.|++|.|+.+||..++..++ ..++..+ + +.+|..+| ++|.|+|+||+.+
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence 356788899999999999999999999999999988 8888877 6 35777888 8999999999998
Q ss_pred Hccccc-----cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 435 TMHMNR-----VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 435 ~~~~~~-----~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+..... ....+.+..+|+.+|+|++|+|+.+|++.+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 123 (174)
T 1q80_A 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML 123 (174)
T ss_dssp HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc
Confidence 765433 2234679999999999999999999999888765
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=122.56 Aligned_cols=108 Identities=20% Similarity=0.294 Sum_probs=94.1
Q ss_pred hhhHHHHhhHHHhhcccCCC--CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-ccc
Q 011647 366 NLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVE 442 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~~ 442 (480)
.++.+++..++++|..+|.| ++|.|+.+||..++.. .....+..++.+|..+|.|++|.|+|+||+.++.... ...
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 108 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP 108 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence 67889999999999999999 9999999999999987 3334456778899999999999999999999987654 335
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
..+.+..+|+.+|+|++|+|+.+|++.+...+
T Consensus 109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~ 140 (207)
T 2ehb_A 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140 (207)
T ss_dssp HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 67789999999999999999999999987643
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.46 E-value=8.7e-14 Score=120.12 Aligned_cols=105 Identities=20% Similarity=0.217 Sum_probs=86.3
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhh----cccCCCCCHHHHHHH-----------HHhhcCCCCcceeHHHHHHHH
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGL----PKLGTRLSESEVRQL-----------MEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l----~~~~~~~~~~~~~~~-----------~~~~d~~~~g~I~~~eF~~~~ 435 (480)
++..++++|..+|.|++|.|+.+||..++ +.+|..++..++..+ |..+|.|++|.|+|+||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35678999999999999999999999975 456888888777654 799999999999999999976
Q ss_pred cccccccc-------HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 436 MHMNRVER-------EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 436 ~~~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
........ .+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~ 128 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG 128 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 65332221 34589999999999999999999998876543
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-13 Score=119.16 Aligned_cols=109 Identities=22% Similarity=0.264 Sum_probs=95.2
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
..++.+++..+.+.|..+ |++|.|+.+||..++..++.. .+..++..+|..+|.|++|.|+|+||+.++........
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence 356777777776666654 689999999999999998865 78999999999999999999999999999876665667
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~ 122 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 122 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH
Confidence 78999999999999999999999999988773
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-13 Score=120.08 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=79.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhccc----CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
..|+++|+.|| |++|+|+.+||+.+++.+ |..+++++++.++..+| |++|.|+|+||+.++... +.+.
T Consensus 76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~ 147 (174)
T 2i7a_A 76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMA 147 (174)
T ss_dssp HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHH
Confidence 46889999999 999999999999999999 99999999999999999 999999999999987643 4789
Q ss_pred HHHHHhcCCCCCce--ehhhhHHH
Q 011647 449 KAFEYFDKDNSTSQ--WKSWNMRL 470 (480)
Q Consensus 449 ~~F~~~D~d~~G~i--~~~e~~~~ 470 (480)
.+|+.+|+|++| | +.+|+..+
T Consensus 148 ~~F~~~D~d~~G-I~~~~~Ef~~~ 170 (174)
T 2i7a_A 148 KTFRNLSKDGKG-LYLTEMEWMSL 170 (174)
T ss_dssp HHHHHHCSSSSC-CCCCHHHHHHH
T ss_pred HHHHHhCCCCCC-ceecHHHHHHH
Confidence 999999999999 7 55555544
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=122.10 Aligned_cols=106 Identities=19% Similarity=0.337 Sum_probs=90.9
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc---
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV--- 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~--- 441 (480)
..++++++..++++|..+|.|++|.|+.+||..++ .+|..++. +.++..+|.|++|.|+|+||+.++......
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 45788899999999999999999999999999965 67776654 457889999999999999999987654321
Q ss_pred -------------ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 442 -------------EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 442 -------------~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
...+.+..+|+.+|+|++|+|+.+|++.+...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 142 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM 142 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH
Confidence 256789999999999999999999999988775
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.44 E-value=8.2e-14 Score=124.41 Aligned_cols=104 Identities=21% Similarity=0.271 Sum_probs=92.1
Q ss_pred HhhHHHhhcccCCC-CCCcccHHHHhhhhcccCCCCCH-HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHH
Q 011647 372 IMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (480)
Q Consensus 372 ~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~ 449 (480)
..+++++|..||.+ ++|.|+.+||..+++.++..++. .++..+|..+|.|++|.|+|+||+.++.........+.+..
T Consensus 13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~ 92 (198)
T 2r2i_A 13 ATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW 92 (198)
T ss_dssp TSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHH
Confidence 34567889999988 89999999999999999887665 45999999999999999999999999877665667889999
Q ss_pred HHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+|+.+|.|++|+|+.+|+..+...++
T Consensus 93 ~F~~~D~d~~G~I~~~Ef~~~~~~~~ 118 (198)
T 2r2i_A 93 YFKLYDVDGNGCIDRGELLNIIKAIR 118 (198)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 99999999999999999999887664
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=123.48 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=94.0
Q ss_pred hhhhHHHHhhHHHhhcccCCC--CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-cc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RV 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~ 441 (480)
..++.+++..++++|..+|.| ++|.|+.+||..++.. +....+..++.+|..+|.|++|.|+|+||+.++.... ..
T Consensus 40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 118 (226)
T 2zfd_A 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 118 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCC
Confidence 367899999999999999999 9999999999999987 3333455678899999999999999999999877554 34
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
...+.+..+|+.+|+|++|+|+.+|++.+...
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~ 150 (226)
T 2zfd_A 119 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 150 (226)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence 56778999999999999999999999988864
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.6e-13 Score=118.58 Aligned_cols=108 Identities=17% Similarity=0.215 Sum_probs=94.0
Q ss_pred hhhhHHHHhhHHHhhcccCC-----CC-C--CcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcc-eeHHHHHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMDT-----DN-S--GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-IDYIEFITAT 435 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~-----~~-~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~-I~~~eF~~~~ 435 (480)
..++.+++..+.++|..+|. |+ + |.|+.+||.. ++.+|..++.. .++..+|.|++|. |+|+||+.++
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence 35788899999999999999 68 8 9999999999 99999888765 4778889999999 9999999987
Q ss_pred cccccc-ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 436 MHMNRV-EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 436 ~~~~~~-~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
...... ...+.+..+|+.||+|++|+|+.+|++.+...++.
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~ 129 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 129 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHS
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhc
Confidence 654433 34568999999999999999999999999887764
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.44 E-value=4.7e-14 Score=126.02 Aligned_cols=102 Identities=19% Similarity=0.187 Sum_probs=90.6
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCC-----CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~ 441 (480)
.+.++++++++ |..+|.|++|.|+.+||..+++.+|. .++..+++.++..+|.|++|.|+|+||+.++...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~--- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---
Confidence 34456677888 99999999999999999999999886 6789999999999999999999999999987543
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|+|++|.|+.+|++.+...++
T Consensus 103 ---~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 133 (198)
T 1juo_A 103 ---NGWRQHFISFDTDRSGTVDPQELQKALTTMG 133 (198)
T ss_dssp ---HHHHHHHHTTCTTCCSEECHHHHHHHHHHTT
T ss_pred ---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 5799999999999999999999998887654
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=117.12 Aligned_cols=105 Identities=17% Similarity=0.188 Sum_probs=93.6
Q ss_pred hhHHHHhhHHHhhcccCCCC-CCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccH
Q 011647 367 LSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVERE 444 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~ 444 (480)
...++...++++|..+|.|+ +|.|+.+||..+++.+|..++..++..++..+|.+ |+|+||+.++.. .......
T Consensus 8 ~~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~ 83 (146)
T 2qac_A 8 QQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNV 83 (146)
T ss_dssp HHHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCH
T ss_pred HHHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchH
Confidence 34566778999999999999 99999999999999999999999999999999987 999999998764 3345567
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 84 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 114 (146)
T 2qac_A 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWG 114 (146)
T ss_dssp HHHHHHHHTTCTTCSSEEEHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhC
Confidence 8899999999999999999999999887654
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.8e-13 Score=118.02 Aligned_cols=113 Identities=10% Similarity=0.088 Sum_probs=93.5
Q ss_pred HHHHHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhc---CCCCcceeHHHHHHH
Q 011647 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD---VDGNGTIDYIEFITA 434 (480)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d---~~~~g~I~~~eF~~~ 434 (480)
..+.++....+.++..++++.|..|| ++|.|+.+||..++ |..++...++.++..+| .+++|.|+|+||+.+
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~ 87 (179)
T 3a8r_A 13 KGLQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDF 87 (179)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHH
T ss_pred HHHHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHH
Confidence 33455655545456778999999999 89999999999964 77788888999998887 567899999999998
Q ss_pred HccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH-HHH
Q 011647 435 TMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS-IIW 475 (480)
Q Consensus 435 ~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~-~~~ 475 (480)
+.........+.++.+|+.||+|++|+|+.+|++.+.. .++
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g 129 (179)
T 3a8r_A 88 YEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSAS 129 (179)
T ss_dssp HHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhc
Confidence 76554456678899999999999999999999999887 654
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.4e-14 Score=109.55 Aligned_cols=71 Identities=32% Similarity=0.606 Sum_probs=67.6
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
..+++++..+++++|+.||.|++|.|+.+||+.+|+.+|..+++.+++.+|+.+|.|++|.|+|+||+.++
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 35788888999999999999999999999999999999999999999999999999999999999999876
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.3e-13 Score=116.77 Aligned_cols=87 Identities=31% Similarity=0.475 Sum_probs=81.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.+|.|++|.|+.+||..++..+|...+..+++.++..+|.|++|.|+|+||+.++... +.+..+|+
T Consensus 74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~ 147 (172)
T 2znd_A 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFR 147 (172)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHH
Confidence 568899999999999999999999999999999999999999999999999999999999987654 57899999
Q ss_pred HhcCCCCCceehh
Q 011647 453 YFDKDNSTSQWKS 465 (480)
Q Consensus 453 ~~D~d~~G~i~~~ 465 (480)
.+|+|++|.||.+
T Consensus 148 ~~D~d~dG~i~~~ 160 (172)
T 2znd_A 148 RYDTDQDGWIQVS 160 (172)
T ss_dssp HHCTTSSSCCCCC
T ss_pred HhCCCCCCeEeee
Confidence 9999999999875
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-13 Score=118.74 Aligned_cols=93 Identities=19% Similarity=0.188 Sum_probs=83.9
Q ss_pred HhhcccCCCCCCcccHHHHhhhhcccCC-----CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 377 EMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
+.|..+|.|++|.|+.+||..+++.+|. .++..+++.++..+|.|++|.|+|+||+.++... +.+..+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 78 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF 78 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 4588999999999999999999999886 6789999999999999999999999999987543 5799999
Q ss_pred HHhcCCCCCceehhhhHHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+|+|++|.|+.+|++.+...++
T Consensus 79 ~~~D~d~~G~i~~~el~~~l~~~g 102 (167)
T 1gjy_A 79 ISFDSDRSGTVDPQELQKALTTMG 102 (167)
T ss_dssp HHHCTTCCSEECHHHHHHHHHTTT
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcC
Confidence 999999999999999998876543
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.43 E-value=8.8e-13 Score=120.60 Aligned_cols=110 Identities=23% Similarity=0.278 Sum_probs=96.7
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
..++.+++..+.+.|.. .+++|.|+.+||..++..+ +...+...++.+|..+|.|++|.|+|+||+.++........
T Consensus 59 ~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 136 (229)
T 3dd4_A 59 SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV 136 (229)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh
Confidence 45788888888888876 5678999999999999985 45667788899999999999999999999999877666677
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
++.+..+|+.+|+|++|+|+.+|+..+...+++
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~ 169 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYD 169 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHH
Confidence 889999999999999999999999999998864
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-13 Score=115.30 Aligned_cols=89 Identities=18% Similarity=0.370 Sum_probs=78.5
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
.++...++++|..||.|++|.|+.+||..++..+|..++..+++.++..+|.|++|.|+|+||+.++... .+.+.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~ 118 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL 118 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 6788899999999999999999999999999999999999999999999999999999999999998654 34688
Q ss_pred HHHHHhcCCCCCce
Q 011647 449 KAFEYFDKDNSTSQ 462 (480)
Q Consensus 449 ~~F~~~D~d~~G~i 462 (480)
.+|+.||.|++|..
T Consensus 119 ~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 119 RMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGCCCC-----
T ss_pred HHHHHHccCCCCCC
Confidence 99999999999984
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.7e-13 Score=119.18 Aligned_cols=101 Identities=26% Similarity=0.287 Sum_probs=90.6
Q ss_pred hHHHhhcccCCC-CCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 374 GLKEMFKSMDTD-NSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 374 ~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
+++++|..||.+ ++|.|+.+||..++..++.. .+..++..+|..+|.|++|.|+++||..++.........+.+..+|
T Consensus 26 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f 105 (190)
T 2l2e_A 26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAF 105 (190)
T ss_dssp HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 466788899999 89999999999999998643 5567899999999999999999999999988777677889999999
Q ss_pred HHhcCCCCCceehhhhHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+.+|.|++|.|+.+|+..+...+
T Consensus 106 ~~~D~d~~G~i~~~e~~~~~~~~ 128 (190)
T 2l2e_A 106 QLYDLDNNGLISYDEMLRIVDAI 128 (190)
T ss_dssp HHHCTTSCSCBCHHHHHHHHHHH
T ss_pred hHccCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999988774
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-13 Score=119.11 Aligned_cols=93 Identities=18% Similarity=0.191 Sum_probs=83.8
Q ss_pred HhhcccCCCCCCcccHHHHhhhhcccCC-----CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 377 EMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
+.|..+|.|++|.|+.+||..+++.+|. .++..+++.++..+|.|++|.|+|+||+.++... +.+..+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 76 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF 76 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 4688999999999999999999999886 6789999999999999999999999999987543 5789999
Q ss_pred HHhcCCCCCceehhhhHHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+|+|++|+|+.+|++.+...++
T Consensus 77 ~~~D~d~~G~i~~~el~~~l~~~g 100 (165)
T 1k94_A 77 MTVDQDGSGTVEHHELRQAIGLMG 100 (165)
T ss_dssp HHHCTTCCSBCCHHHHHHHHHHTT
T ss_pred HHhCCCCCceECHHHHHHHHHHhC
Confidence 999999999999999998887654
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.42 E-value=8.9e-13 Score=120.14 Aligned_cols=109 Identities=22% Similarity=0.261 Sum_probs=94.3
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
.++.+++..+.+.|+.. +++|.|+.+||..++..++.. .+..+++.+|..+|.|++|.|+|+||+.++.........
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~ 124 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH 124 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHH
Confidence 47777776666666553 489999999999999998754 789999999999999999999999999998766656678
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+.+..+|+.+|+|++|+|+.+|++.+...+++
T Consensus 125 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~ 156 (224)
T 1s1e_A 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 156 (224)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHHHHH
Confidence 89999999999999999999999999888743
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-13 Score=124.04 Aligned_cols=103 Identities=21% Similarity=0.282 Sum_probs=88.1
Q ss_pred hhHHHhhcccCCC-CCCcccHHHHhhhhcccCCCCCH-HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHH
Q 011647 373 MGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (480)
Q Consensus 373 ~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~ 450 (480)
++++++|+.||.+ ++|.|+.+||..++..++..+.. .+++.+|..+|.|++|.|+|+||+.++.........+.+..+
T Consensus 19 ~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~ 98 (211)
T 2ggz_A 19 QETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWY 98 (211)
T ss_dssp -----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHH
Confidence 3467889999998 89999999999999999877554 569999999999999999999999998766556678899999
Q ss_pred HHHhcCCCCCceehhhhHHHHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
|+.+|+|++|+|+.+|++.+...++
T Consensus 99 F~~~D~d~~G~I~~~E~~~~l~~~~ 123 (211)
T 2ggz_A 99 FKLYDADGNGSIDKNELLDMFMAVQ 123 (211)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHHHT
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 9999999999999999999887764
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.41 E-value=7.3e-13 Score=117.56 Aligned_cols=95 Identities=17% Similarity=0.354 Sum_probs=85.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|+.+|.|++|.|+.+||..++..+|...+.++++.+|..+|.|++|.|+|+||+.++... +.+..+|+
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~------~~~~~~F~ 166 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFA 166 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH------HHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999998653 57899999
Q ss_pred HhcCCCCCce--ehhhhHHHHHH
Q 011647 453 YFDKDNSTSQ--WKSWNMRLRSI 473 (480)
Q Consensus 453 ~~D~d~~G~i--~~~e~~~~~~~ 473 (480)
.+|+|++|.| +.+|+..++..
T Consensus 167 ~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 167 FYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HHCTTCCSEEEEEHHHHHHHHHH
T ss_pred HhCcCCCceEEeeHHHHHHHHHh
Confidence 9999999995 56677776544
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-13 Score=129.24 Aligned_cols=110 Identities=16% Similarity=0.172 Sum_probs=96.7
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCH------HHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE------SEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
..+++.+..+++++|..+|.|++|.|+.+||..+++.+|..++. .+++.++..+|.|++|.|+|+||+.++...
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 8 LQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 35667777889999999999999999999999999998765554 788999999999999999999999987543
Q ss_pred ---------cccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 439 ---------NRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 439 ---------~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
......+++..+|+.+|+|++|+|+.+|+..+...+
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 132 (263)
T 2f33_A 88 ENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDL 132 (263)
T ss_dssp TTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHH
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHH
Confidence 345677889999999999999999999999988776
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-13 Score=115.47 Aligned_cols=89 Identities=22% Similarity=0.389 Sum_probs=74.0
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
.++...++++|..||.|++|.|+.+||..++..+|..++..+++.++..+|.|++|.|+|+||+.++... .+.+.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~ 120 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL 120 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999999999988654 23699
Q ss_pred HHHHHhcCCCCCce
Q 011647 449 KAFEYFDKDNSTSQ 462 (480)
Q Consensus 449 ~~F~~~D~d~~G~i 462 (480)
.+|+.||.|++|.-
T Consensus 121 ~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 121 KLVMMFEGKANESS 134 (150)
T ss_dssp HHHHC---------
T ss_pred HHHHHHcCCCCCCC
Confidence 99999999999984
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=122.17 Aligned_cols=105 Identities=22% Similarity=0.268 Sum_probs=93.3
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhccc----CCCCCHHHHHH----HHHhhcCCCCcceeHHHHHHHHccc-----
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQ----LMEAADVDGNGTIDYIEFITATMHM----- 438 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~d~~~~g~I~~~eF~~~~~~~----- 438 (480)
...++.+|..+|.+++|.|+.+||..++..+ |..++..++.. ++..+|.|++|.|+|+||+.++...
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~ 181 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL 181 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence 3558899999999999999999999999988 88999988877 9999999999999999999987541
Q ss_pred ---cccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 439 ---NRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 439 ---~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
......+.+..+|+.+|+|++|+||.+|++.+...++.
T Consensus 182 ~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~ 222 (263)
T 2f33_A 182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCE 222 (263)
T ss_dssp HHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHH
T ss_pred HhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHH
Confidence 23356788999999999999999999999999988876
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-13 Score=121.63 Aligned_cols=108 Identities=17% Similarity=0.215 Sum_probs=94.3
Q ss_pred hhhhHHHHhhHHHhhcccCC-----CC-C--CcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcc-eeHHHHHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMDT-----DN-S--GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-IDYIEFITAT 435 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~-----~~-~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~-I~~~eF~~~~ 435 (480)
..++.+++..+.+.|..+|. |+ + |.|+.+||.. ++.+|..++.+ .+|..+|.|++|. |+|+||+.++
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~ 118 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 118 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH---HHHHHhCcCCCCCEecHHHHHHHH
Confidence 46899999999999999998 56 6 9999999999 99898887754 5788899999999 9999999988
Q ss_pred cccccc-ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 436 MHMNRV-EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 436 ~~~~~~-~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
...... ..++.+..+|+.||+|++|+|+.+|++.+...++.
T Consensus 119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~ 160 (214)
T 2l4h_A 119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 160 (214)
T ss_dssp HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhc
Confidence 755433 44678999999999999999999999999988865
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.39 E-value=7e-13 Score=117.65 Aligned_cols=106 Identities=27% Similarity=0.367 Sum_probs=91.3
Q ss_pred hhhHHHHhhHHHhhcccCCC-CCCcccHHHHhhhhcccCCCC-CHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 366 NLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
.++.++ ++++|..||.+ ++|.|+.+||..++..++... ....+..+|..+|.|++|.|+|+||..++.......+
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 97 (193)
T 1bjf_A 21 DFTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 97 (193)
T ss_dssp SCCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred CCCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCH
Confidence 355544 55677788888 899999999999999987654 4677899999999999999999999998876665677
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.+.+..+|+.+|.|++|.|+.+|+..+...+
T Consensus 98 ~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~ 128 (193)
T 1bjf_A 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128 (193)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence 8899999999999999999999999888765
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.39 E-value=6.2e-13 Score=115.90 Aligned_cols=91 Identities=24% Similarity=0.420 Sum_probs=83.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.+|.+++|.|+.+||..++..+|..++..+++.++..+| |++|.|+|+||+.++... +.+..+|+
T Consensus 77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------~~~~~~F~ 149 (173)
T 1alv_A 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------DAMFRAFK 149 (173)
T ss_dssp HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHHHHHHH
Confidence 56889999999999999999999999999999999999999999999 999999999999988653 57899999
Q ss_pred HhcCCCCCceehhhhHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~ 471 (480)
.+|+|++|.||.+ +++..
T Consensus 150 ~~D~d~~G~i~~~-~~~~l 167 (173)
T 1alv_A 150 SLDKDGTGQIQVN-IQEWL 167 (173)
T ss_dssp HHSSSCCSEEEEE-HHHHH
T ss_pred HhCCCCCCeecHh-HHHHH
Confidence 9999999999998 55544
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.39 E-value=9.8e-13 Score=117.37 Aligned_cols=104 Identities=23% Similarity=0.259 Sum_probs=90.7
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-------cc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-------RV 441 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-------~~ 441 (480)
......+..+|..+|.|++|.|+..||..++..++...+..++..+|..+|.|++|.|+++||..++.... ..
T Consensus 48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~ 127 (198)
T 2r2i_A 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAM 127 (198)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCC
T ss_pred cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchh
Confidence 34445688999999999999999999999999998888889999999999999999999999999886543 22
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..++.+..+|+.+|.|++|.|+.+|+..+..
T Consensus 128 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 158 (198)
T 2r2i_A 128 TAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158 (198)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3355699999999999999999999988765
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5e-13 Score=120.11 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=89.7
Q ss_pred hHHHhhcccCCC-CCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 374 GLKEMFKSMDTD-NSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 374 ~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
++.++|..||.+ ++|.|+.+||..++..++.. .+..++..+|..+|.|++|.|+|+||+.++.........+.+..+|
T Consensus 34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f 113 (207)
T 2d8n_A 34 ELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAF 113 (207)
T ss_dssp HHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 456677777888 79999999999999998764 7889999999999999999999999999987665556677899999
Q ss_pred HHhcCCCCCceehhhhHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+.+|+|++|+|+.+|+..+...+
T Consensus 114 ~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 114 SLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHhcCCCCCeEcHHHHHHHHHHH
Confidence 99999999999999999998876
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.3e-13 Score=125.84 Aligned_cols=108 Identities=19% Similarity=0.295 Sum_probs=92.9
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhc----ccCC--CCCHHHHHHH----HHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLP----KLGT--RLSESEVRQL----MEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~----~~~~--~~~~~~~~~~----~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++..+...++++|..||.|++|.|+.+||..+++ .+|. .++..++..+ |..+|.|++|.|+|+||+.++.
T Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~ 84 (272)
T 2be4_A 5 FANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMIL 84 (272)
T ss_dssp CCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHS
T ss_pred HHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHh
Confidence 4455567799999999999999999999999999 8898 8998888764 4778999999999999999843
Q ss_pred -----------cccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 437 -----------HMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 437 -----------~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
......+.+++..+|+.+|+|++|.|+.+|+..+...+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~ 133 (272)
T 2be4_A 85 PQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDL 133 (272)
T ss_dssp CHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHH
T ss_pred hhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHH
Confidence 22234567889999999999999999999999988876
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=4e-13 Score=108.30 Aligned_cols=90 Identities=16% Similarity=0.279 Sum_probs=71.4
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc---
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR--- 440 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~--- 440 (480)
+..++.+.++|+.||.+ +|.|+.+||+.+|+. ++...+..+++.++..+|.|+||+|+|+||+.++..+..
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~h 89 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACN 89 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHH
Confidence 45578899999999998 899999999999987 788889999999999999999999999999998654221
Q ss_pred -------------cccHHHHHHHHHHhcCCCC
Q 011647 441 -------------VEREEHLYKAFEYFDKDNS 459 (480)
Q Consensus 441 -------------~~~~~~~~~~F~~~D~d~~ 459 (480)
..+...++.+|+.+|.|||
T Consensus 90 e~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 90 DYFVVHMKQENLYFQGDSTVHEILSKLSLEGD 121 (121)
T ss_dssp HHHTTSCC---------CCHHHHHHHCCC---
T ss_pred HHHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence 0112337778888887775
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.38 E-value=8.6e-13 Score=116.76 Aligned_cols=106 Identities=21% Similarity=0.268 Sum_probs=90.1
Q ss_pred hhhHHHHhhHHHhhcccCCC-CCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 366 NLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
.++.++ ++++|..||.+ ++|.|+.+||..++..+ +......++..+|..+|.|++|.|+|+||+.++........
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1g8i_A 21 YFTEKE---VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 97 (190)
T ss_dssp SSCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred CCCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCH
Confidence 345444 55667777777 89999999999999987 33456788999999999999999999999999876665667
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.+.+..+|+.+|.|++|.|+.+|+..+...+
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 128 (190)
T 1g8i_A 98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128 (190)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence 8899999999999999999999999988775
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=115.27 Aligned_cols=100 Identities=22% Similarity=0.261 Sum_probs=89.4
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc----c--------cc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N--------RV 441 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~----~--------~~ 441 (480)
.+..+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+++||..++... . ..
T Consensus 64 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~ 143 (190)
T 1fpw_A 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143 (190)
T ss_dssp HHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCC
T ss_pred HHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccc
Confidence 47889999999999999999999999999888889999999999999999999999999987652 1 22
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+.+.+..+|+.+|.|++|.|+.+|+..+...
T Consensus 144 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 175 (190)
T 1fpw_A 144 TPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175 (190)
T ss_dssp CHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 56788999999999999999999999887664
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.37 E-value=9e-13 Score=116.20 Aligned_cols=111 Identities=13% Similarity=0.157 Sum_probs=76.2
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc------CCCCCHHHHHHH------------------------
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL------GTRLSESEVRQL------------------------ 414 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~~~~------------------------ 414 (480)
..+++++...++++|..+|.|++|.|+.+||..+++.+ |..++..++..+
T Consensus 6 ~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~ 85 (186)
T 2hps_A 6 ESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNA 85 (186)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHH
T ss_pred ccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHH
Confidence 45677778888888888888888888888888887654 444333333332
Q ss_pred ----------------------HHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 415 ----------------------MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 415 ----------------------~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
...+|.|++|.|+++||..++.......+.+++..+|+.+|.|++|.|+.+|+..+..
T Consensus 86 E~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 165 (186)
T 2hps_A 86 TDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165 (186)
T ss_dssp HHHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 2445777777777777777665554445666777777777777777777777777666
Q ss_pred HHH
Q 011647 473 IIW 475 (480)
Q Consensus 473 ~~~ 475 (480)
.++
T Consensus 166 ~~~ 168 (186)
T 2hps_A 166 DFL 168 (186)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=114.65 Aligned_cols=103 Identities=19% Similarity=0.194 Sum_probs=91.1
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc------------cc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM------------NR 440 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~------------~~ 440 (480)
..+..+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+++||..++... ..
T Consensus 63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~ 142 (190)
T 2l2e_A 63 AFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDE 142 (190)
T ss_dssp HHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred HHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCccccc
Confidence 457789999999999999999999999999988899999999999999999999999999987552 12
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+.+.+..+|+.+|.|++|.|+.+|+..+.....
T Consensus 143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 2l2e_A 143 DTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP 177 (190)
T ss_dssp CCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT
T ss_pred ccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence 34678899999999999999999999988876543
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.1e-12 Score=111.84 Aligned_cols=91 Identities=24% Similarity=0.369 Sum_probs=82.6
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|+.+|.|++|.|+.+||..++..+|..++.++++.++..+ |++|.|+|+||+.++... +.+..+|+
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~ 143 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL------RALTDSFR 143 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH------HHHHHHHH
Confidence 4688999999999999999999999999999999999999999999 889999999999988654 47899999
Q ss_pred HhcCCCCCceehhhhHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+|+|++|.||.+ +.+...
T Consensus 144 ~~D~d~~G~i~~~-~~~~l~ 162 (167)
T 1gjy_A 144 RRDSAQQGMVNFS-YDDFIQ 162 (167)
T ss_dssp HHCTTCCSEEEEE-HHHHHH
T ss_pred HhCCCCCeeEEee-HHHHHH
Confidence 9999999999998 665543
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=111.68 Aligned_cols=92 Identities=23% Similarity=0.297 Sum_probs=83.8
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.+|.|++|.|+.+||..++..+|..++..+++.++..+ |++|.|+|+||+.++... +.+..+|+
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~ 141 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL------RALTDFFR 141 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence 5688999999999999999999999999999999999999999999 889999999999988654 57899999
Q ss_pred HhcCCCCCceehhhhHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+|+|++|.|+.+ +++....
T Consensus 142 ~~D~d~~G~i~~~-~~~~l~~ 161 (165)
T 1k94_A 142 KRDHLQQGSANFI-YDDFLQG 161 (165)
T ss_dssp TTCTTCCSEEEEE-HHHHHHH
T ss_pred HhCCCCCCeEeee-HHHHHHH
Confidence 9999999999998 7776543
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=114.22 Aligned_cols=85 Identities=19% Similarity=0.161 Sum_probs=57.9
Q ss_pred CCCCCCcccHHHHhhhhccc------CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcC
Q 011647 383 DTDNSGTITFEELKAGLPKL------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456 (480)
Q Consensus 383 D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~ 456 (480)
+.|++|.|+.+||+.+|+.+ |..++..+++.++..+|.|++|.|+|+||+.++... +.++.+|+.||
T Consensus 14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD- 86 (174)
T 2i7a_A 14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ- 86 (174)
T ss_dssp SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-
T ss_pred cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-
Confidence 45677777777777777776 456667777777777777777777777777665432 35677777777
Q ss_pred CCCCceehhhhHHHHHHH
Q 011647 457 DNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 457 d~~G~i~~~e~~~~~~~~ 474 (480)
|++|+|+.+|++.+...+
T Consensus 87 d~~G~I~~~El~~~l~~l 104 (174)
T 2i7a_A 87 TSPGVLLSSDLWKAIENT 104 (174)
T ss_dssp SBTTBEEGGGHHHHHHTC
T ss_pred CCCCcCCHHHHHHHHHHh
Confidence 777777777777666554
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=98.66 Aligned_cols=85 Identities=31% Similarity=0.484 Sum_probs=71.7
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
...+++++...++.+|..+|.|++|.|+.+||..++..+| .++..+++.++..+|.|++|.|+|+||+.++.... ..
T Consensus 2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~--~~ 78 (86)
T 2opo_A 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR--GL 78 (86)
T ss_dssp ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT--TT
T ss_pred CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc--cH
Confidence 4567888899999999999999999999999999999999 99999999999999999999999999999876543 23
Q ss_pred HHHHHHHH
Q 011647 444 EEHLYKAF 451 (480)
Q Consensus 444 ~~~~~~~F 451 (480)
.+++.++|
T Consensus 79 ~~~~~~aF 86 (86)
T 2opo_A 79 VKDVSKIF 86 (86)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 34555554
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-12 Score=115.57 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=90.7
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc------cccc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------RVER 443 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------~~~~ 443 (480)
.....+.++|..+|.|++|.|+.+||..++..++.....+++..+|..+|.|++|.|+++||..++.... ....
T Consensus 54 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 133 (211)
T 2ggz_A 54 KANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSP 133 (211)
T ss_dssp HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTH
T ss_pred chHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccH
Confidence 3445688999999999999999999999999988888889999999999999999999999999886542 2334
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
++.+..+|+.+|.|++|.|+.+||..+...
T Consensus 134 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 134 EEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 566899999999999999999999887653
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=121.89 Aligned_cols=105 Identities=20% Similarity=0.291 Sum_probs=90.9
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhccc----CCCCCHHHHHH----HHHhhcCCCCcceeHHHHHHHHccc-----
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQ----LMEAADVDGNGTIDYIEFITATMHM----- 438 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~d~~~~g~I~~~eF~~~~~~~----- 438 (480)
...++.+|..+|.|++|.|+.+||..++..+ |..++..++.. +|..+|.|++|.|+|+||+.++...
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 3458899999999999999999999999988 88888887754 9999999999999999999886531
Q ss_pred -------cccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 439 -------NRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 439 -------~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
......+.+..+|+.+|+|++|.|+.+|++.+...++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~ 227 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMME 227 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHH
Confidence 12244578999999999999999999999999988765
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-12 Score=114.58 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=91.2
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc------------ccc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM------------NRV 441 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~------------~~~ 441 (480)
.+..+|..+|.|++|.|+.+||..++..++...+..++..+|..+|.|++|.|+++||..++... ...
T Consensus 64 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~ 143 (190)
T 1g8i_A 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN 143 (190)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGS
T ss_pred HHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccc
Confidence 47889999999999999999999999988777778899999999999999999999999987652 223
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
.+.+.+..+|+.+|.|++|.|+.+|+..+......+
T Consensus 144 ~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~~~ 179 (190)
T 1g8i_A 144 TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSI 179 (190)
T ss_dssp SHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHH
T ss_pred cHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhChHH
Confidence 567889999999999999999999999887765443
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.2e-12 Score=118.29 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=97.7
Q ss_pred ceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC-eeEEEEEEEeCCeEEEE
Q 011647 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-IVELKGAYEDRHSVNLI 146 (480)
Q Consensus 68 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~-iv~~~~~~~~~~~~~lv 146 (480)
.|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+..+.- +++++.+...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 355543334666799999865 45678999987542 12457889999999975522 67799988888889999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--------------------------------------
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG-------------------------------------- 188 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-------------------------------------- 188 (480)
|||++|.+|. . .... ...++.+++..|..||+..
T Consensus 94 ~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 94 LGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp EECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred EEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 9999998883 1 1122 2256677777777777643
Q ss_pred --------------------CeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 189 --------------------VMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 189 --------------------ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
++|+|++|.||+++ ++..+.|+|||.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLGV 214 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhccc
Confidence 99999999999994 334467999999764
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-12 Score=114.82 Aligned_cols=106 Identities=25% Similarity=0.255 Sum_probs=88.8
Q ss_pred hhhHHHHhhHHHhhcccCCC-CCCcccHHHHhhhhcccCC-CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 366 NLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
.++.+++. ++|..||.+ ++|.|+.+||..++..++. ......+..+|..+|.|++|.|+++||..++.......+
T Consensus 21 ~~~~~~i~---~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 21 YFDRREIQ---QWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CSTHHHHH---HHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCCHHHHH---HHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence 46666554 455555655 8999999999999998853 345677999999999999999999999999876655667
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.+.+..+|+.+|.|++|.|+.+|+..+...+
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~ 128 (190)
T 1fpw_A 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASV 128 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 7899999999999999999999999888774
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-12 Score=118.46 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=84.8
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|+.+|.|++|.|+.+||..++..+|...+.++++.++..+| |++|.|+|+||+.++.... .+..+|+
T Consensus 117 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~------~~~~~F~ 189 (220)
T 3sjs_A 117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAA------QTRSAYQ 189 (220)
T ss_dssp HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHH------HHHHHHH
Confidence 55889999999999999999999999999999999999999999999 9999999999999987654 6899999
Q ss_pred Hh-cCCCCC------ceehhhhHHHHHHH
Q 011647 453 YF-DKDNST------SQWKSWNMRLRSII 474 (480)
Q Consensus 453 ~~-D~d~~G------~i~~~e~~~~~~~~ 474 (480)
.+ |++++| .|+.+|+..+...+
T Consensus 190 ~~~D~~~~G~i~~~~~i~~~ef~~~~~~~ 218 (220)
T 3sjs_A 190 MIFMNPYYGPMKPFNPMEFGKFLDVVTSL 218 (220)
T ss_dssp HHHTSGGGCSCCCCCHHHHHHHHHHHHHT
T ss_pred HhcccCCCCCcccccceeHHHHHHHHHHh
Confidence 99 999999 77888888776554
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.31 E-value=4.6e-12 Score=112.98 Aligned_cols=90 Identities=27% Similarity=0.387 Sum_probs=81.6
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.+|.|++|.|+.+||..++..+|...+.++++.++..+ |++|.|+|+||+.++... +.+..+|+
T Consensus 103 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~ 174 (198)
T 1juo_A 103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL------RALTDSFR 174 (198)
T ss_dssp HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence 5688999999999999999999999999999999999999999999 889999999999988654 47899999
Q ss_pred HhcCCCCCceehhhhHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~ 471 (480)
.+|+|++|.||.+ +.+..
T Consensus 175 ~~D~d~~G~is~~-~~~~l 192 (198)
T 1juo_A 175 RRDTAQQGVVNFP-YDDFI 192 (198)
T ss_dssp HTCTTCCSEEEEE-HHHHH
T ss_pred HhCCCCCCeEeec-HHHHH
Confidence 9999999999996 54443
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.2e-12 Score=98.09 Aligned_cols=86 Identities=33% Similarity=0.572 Sum_probs=74.4
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc---cc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV---ER 443 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~---~~ 443 (480)
.+.+....++++|..||.+++|.|+.+||..++..+|..++..+++.++..+|.|++|.|+|+||+.++...... ..
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~ 82 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG 82 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence 345667889999999999999999999999999999999999999999999999999999999999987654322 23
Q ss_pred HHHHHHHHH
Q 011647 444 EEHLYKAFE 452 (480)
Q Consensus 444 ~~~~~~~F~ 452 (480)
.+++..+|+
T Consensus 83 ~~~l~~aF~ 91 (92)
T 2kn2_A 83 WSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 467777775
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=3e-12 Score=119.17 Aligned_cols=109 Identities=21% Similarity=0.287 Sum_probs=93.4
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
.++.+++..+.+.|.. .+++|.|+.+||..++..++ ...+..++..+|..+|.|++|.|+|+||+.++.........
T Consensus 87 ~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~ 164 (256)
T 2jul_A 87 KFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH 164 (256)
T ss_dssp TSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred CCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence 4677776666555553 24899999999999999986 56778899999999999999999999999998776666778
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+.+..+|+.+|.|++|+|+.+|+..+...+++
T Consensus 165 ~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~ 196 (256)
T 2jul_A 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYD 196 (256)
T ss_dssp HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 89999999999999999999999999888753
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-11 Score=107.52 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=86.6
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC--------HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS--------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~--------~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~ 445 (480)
.|..+|..+|.|++|.|+.+||..++........ ...+..+|..+|.|++|.|+++||..++.... .+.+
T Consensus 59 ~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~ 136 (176)
T 1nya_A 59 LFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKA 136 (176)
T ss_dssp HHHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHH
Confidence 3558999999999999999999999988654444 36688999999999999999999999887665 7888
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
++..+|+.+|.|++|.|+.+|+..+...+
T Consensus 137 ~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 165 (176)
T 1nya_A 137 EAAEAFNQVDTNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999998887544
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.29 E-value=6.8e-12 Score=111.21 Aligned_cols=102 Identities=21% Similarity=0.252 Sum_probs=88.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc----c------c--
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N------R-- 440 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~----~------~-- 440 (480)
..+..+|..+|.|++|.|+..||..++..++...+..++..+|..+|.|++|.|+++||..++... . .
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~ 142 (193)
T 1bjf_A 63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE 142 (193)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence 346789999999999999999999999998888888999999999999999999999999987542 1 0
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
....+.+..+|+.+|+|++|.|+.+|+..+....
T Consensus 143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 176 (193)
T 1bjf_A 143 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD 176 (193)
T ss_dssp SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcC
Confidence 1235679999999999999999999999887643
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.29 E-value=4.7e-12 Score=115.32 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=88.7
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc----c--------c
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N--------R 440 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~----~--------~ 440 (480)
..+..+|+.+|.|++|.|+.+||..++..++.....+++..+|..+|.|++|.|+++||..++... . .
T Consensus 89 ~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~ 168 (224)
T 1s1e_A 89 TYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 168 (224)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCS
T ss_pred HHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCH
Confidence 456788999999999999999999999988767778899999999999999999999999987543 1 1
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
....+.+..+|+.+|.|+||.|+.+|+..+.....
T Consensus 169 ~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 203 (224)
T 1s1e_A 169 DTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 203 (224)
T ss_dssp SSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence 22457899999999999999999999988776543
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.28 E-value=7.4e-12 Score=112.16 Aligned_cols=101 Identities=22% Similarity=0.235 Sum_probs=89.0
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc------------
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR------------ 440 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~------------ 440 (480)
..+..+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+++||..++.....
T Consensus 59 ~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~ 138 (204)
T 1jba_A 59 QYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAE 138 (204)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSS
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCcccccc
Confidence 45678899999999999999999999999888888899999999999999999999999998765411
Q ss_pred -----cccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 441 -----VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 441 -----~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
....+.+..+|+.+|.|++|.|+.+|+..+...
T Consensus 139 ~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 176 (204)
T 1jba_A 139 QQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176 (204)
T ss_dssp TTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred ccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence 155678999999999999999999999887653
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.28 E-value=4.7e-12 Score=113.73 Aligned_cols=105 Identities=23% Similarity=0.316 Sum_probs=91.0
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc----c----cc---
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N----RV--- 441 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~----~----~~--- 441 (480)
..+..+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+++||..++... . ..
T Consensus 71 ~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~ 150 (207)
T 2d8n_A 71 AYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPD 150 (207)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCT
T ss_pred HHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCccc
Confidence 457889999999999999999999999999888888899999999999999999999999987653 2 11
Q ss_pred ---ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 442 ---EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 442 ---~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
..++.+..+|+.+|+|++|.|+.+|+..+......+
T Consensus 151 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 189 (207)
T 2d8n_A 151 DENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEI 189 (207)
T ss_dssp TTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHCHHH
T ss_pred ccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhChHH
Confidence 235779999999999999999999999887754443
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.5e-12 Score=105.62 Aligned_cols=100 Identities=10% Similarity=-0.051 Sum_probs=62.2
Q ss_pred HHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-ccccHHHHHHHHHH
Q 011647 376 KEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVEREEHLYKAFEY 453 (480)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~~~~~~~~~~F~~ 453 (480)
+++|..+|.|++|.|+.+||..++... .......++..+|..+|.|++|.|+.+||..++.... ...+.+++..+|+.
T Consensus 6 ~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~ 85 (135)
T 3h4s_E 6 KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVRE 85 (135)
T ss_dssp -------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 567888899999999999998877653 3333456788889999999999999999998887776 36778888999999
Q ss_pred hcCCCCCceehhhhHHHHHHHH
Q 011647 454 FDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 454 ~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+|.|++|.|+.+||..++....
T Consensus 86 ~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 86 GDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HCSSCSSSBCHHHHHHHHHHHH
T ss_pred hCCCCCCCCcHHHHHHHHHHhC
Confidence 9999999999998888776543
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=98.19 Aligned_cols=101 Identities=13% Similarity=0.129 Sum_probs=84.6
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---ccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRV 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~ 441 (480)
..++.++ +.++|..+| ++|.|+.+||..++.. ......++..+|..+|.|++|.|+.+||..++... ...
T Consensus 5 ~~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~ 77 (109)
T 3fs7_A 5 DILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARV 77 (109)
T ss_dssp GTSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCC
T ss_pred CcCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccccc
Confidence 3445444 556677777 7999999999998875 34467889999999999999999999999988776 566
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+.+++..+|+.+|.|++|.|+.+|+..+..
T Consensus 78 ~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 78 LTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 7889999999999999999999999988753
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-12 Score=116.17 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=87.6
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc------------ccc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM------------NRV 441 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~------------~~~ 441 (480)
.+..+|..+|.|++|.|+.+||..++..+......+.+..+|..+|.|++|.|+++||..++... ...
T Consensus 103 ~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~ 182 (229)
T 3dd4_A 103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED 182 (229)
T ss_dssp HHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchh
Confidence 46688999999999999999999999987766678899999999999999999999999987654 223
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+.+.+..+|+.+|+|+||.|+.+|+..+......
T Consensus 183 ~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~ 217 (229)
T 3dd4_A 183 APRQHVETFFQKMDKNKDGVVTIDEFIESCQKDEN 217 (229)
T ss_dssp -CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCHH
T ss_pred hHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCHH
Confidence 45578999999999999999999999888765443
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.26 E-value=6.1e-12 Score=110.53 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=86.1
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc----c--------c
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N--------R 440 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~----~--------~ 440 (480)
..+..+|..+|.|++|.|+.+||..++..++...+..++..+|..+|.|++|.|+++||..++... . .
T Consensus 56 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~ 135 (183)
T 1s6c_A 56 TYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 135 (183)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccH
Confidence 456788999999999999999999999988777788899999999999999999999999987653 1 1
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
....+.+..+|+.+|.|++|.|+.+|+..+..
T Consensus 136 ~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~ 167 (183)
T 1s6c_A 136 DTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ 167 (183)
T ss_dssp --CHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 12347899999999999999999999987654
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.26 E-value=8.7e-12 Score=107.39 Aligned_cols=100 Identities=18% Similarity=0.130 Sum_probs=86.1
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC-------HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-------~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 446 (480)
.|..+|..+|.|++|.|+.+||..++........ ...+..+|..+|.|++|.|+++||..++.... .+.++
T Consensus 56 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~ 133 (166)
T 3akb_A 56 LWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDL 133 (166)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHH
Confidence 4568899999999999999999998887643321 23488899999999999999999999987655 77889
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+..+|+.+|.|++|.|+.+|+..+...++
T Consensus 134 ~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 162 (166)
T 3akb_A 134 ARQAAAALDTDGDGKVGETEIVPAFARYF 162 (166)
T ss_dssp HHHHHHHHCTTCSSBCCHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 99999999999999999999999887765
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=7.8e-12 Score=116.31 Aligned_cols=101 Identities=18% Similarity=0.244 Sum_probs=89.1
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc------------c
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------------R 440 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------------~ 440 (480)
..+..+|..+|.|++|.|+.+||..++..++.....+++..+|..+|.|++|.|+++||..++.... .
T Consensus 129 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~ 208 (256)
T 2jul_A 129 TYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILRE 208 (256)
T ss_dssp HHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCC
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccch
Confidence 4577899999999999999999999999988777889999999999999999999999999876431 2
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
...++.+..+|+.+|.|+||.|+.+|+..+...
T Consensus 209 ~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 209 DAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241 (256)
T ss_dssp CCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 236788999999999999999999999887654
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.4e-12 Score=122.62 Aligned_cols=98 Identities=18% Similarity=0.309 Sum_probs=88.0
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHH-HHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQ-LMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~-~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
+....+..+|..||.|++|.|+.+||..++ +|..++..++.. +|..+|.|++|.|+|+||+.++.... .+.
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~ 256 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR 256 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence 456778999999999999999999999999 888888999999 99999999999999999999876543 789
Q ss_pred HHHHHhcCCCCCceehhhhHHHH-HHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLR-SIIW 475 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~-~~~~ 475 (480)
.+|+.||+|++|+||.+|+..+. ..++
T Consensus 257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g 284 (323)
T 1ij5_A 257 ILYAFADFDKSGQLSKEEVQKVLEDAHI 284 (323)
T ss_dssp HHHHHTCSSSCSSEEHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHcC
Confidence 99999999999999999999888 5543
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=95.19 Aligned_cols=75 Identities=35% Similarity=0.546 Sum_probs=69.9
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+...+++++...++.+|..||.|++|.|+.+||..+++.+|..++..+++.+|..+|.|++|.|+|+||+.++..
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 445678888999999999999999999999999999999999999999999999999999999999999998754
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.2e-11 Score=96.32 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=85.4
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---ccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRV 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~ 441 (480)
..+++++ +.++|..+|. +|.|+.+||..++... .....++..+|..+|.|++|.|+.+||..++... ...
T Consensus 4 ~~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~ 76 (109)
T 5pal_A 4 KVLKADD---INKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp GTSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CcCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence 3455544 5667777776 8999999999988653 4467889999999999999999999999988766 666
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+.+++..+|+.+|.|++|.|+.+|+..+...
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 77 LNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 78899999999999999999999999887653
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=106.82 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=91.9
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|..+|.|++|.|+.+||..++.........+.+..+|..+|.|++|.|+++||..++. ....+.+++..+|+
T Consensus 87 ~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~ 164 (191)
T 3khe_A 87 AEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQ 164 (191)
T ss_dssp HHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHH
Confidence 4577889999999999999999999988776666788999999999999999999999999987 44567889999999
Q ss_pred HhcCCCCCceehhhhHHHHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+|.|++|.|+.+|+..+...+..
T Consensus 165 ~~D~~~dg~i~~~eF~~~~~~~~~ 188 (191)
T 3khe_A 165 ECDKNNDGEVDFEEFVEMMQKICD 188 (191)
T ss_dssp HHCTTCSSSEEHHHHHHHHHHHHT
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhc
Confidence 999999999999999999888765
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=109.66 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=85.9
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccC---------CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLG---------TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~---------~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
.|..+|..+|.|++|.|+.+||..++.... .......+..+|..+|.|++|.|+++||..++.... .+.
T Consensus 65 ~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~ 142 (191)
T 2ccm_A 65 IWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPK 142 (191)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCH
T ss_pred HHHHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCH
Confidence 456677999999999999999999887652 122346788899999999999999999999986654 677
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+++..+|+.+|+|+||.|+.+|+..+...++
T Consensus 143 ~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~ 173 (191)
T 2ccm_A 143 SDCDAAFDTLSDGGKTMVTREIFARLWTEYF 173 (191)
T ss_dssp HHHHHHHHHHTTTTTSCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence 8899999999999999999999999988765
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.24 E-value=5.5e-12 Score=133.83 Aligned_cols=102 Identities=19% Similarity=0.235 Sum_probs=93.2
Q ss_pred hhHHH-HhhHHHhhcccCCCCCCcccHHHHhhhhccc--------CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 367 LSEEE-IMGLKEMFKSMDTDNSGTITFEELKAGLPKL--------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 367 ~~~~~-~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~--------~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+++++ ..+++++|..+| |++|.|+.+||..+|..+ +..++..+++.++..+|.|++|+|+|+||+.++..
T Consensus 525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~ 603 (714)
T 3bow_A 525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603 (714)
T ss_dssp CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 66677 788999999999 999999999999999997 78899999999999999999999999999998765
Q ss_pred ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 438 MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 438 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
. +.++.+|+.||+|++|+|+.+|++.+...++
T Consensus 604 ~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G 635 (714)
T 3bow_A 604 I------QKYQKIYREIDVDRSGTMNSYEMRKALEEAG 635 (714)
T ss_dssp H------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTT
T ss_pred H------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcC
Confidence 4 5799999999999999999999998887654
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-11 Score=92.28 Aligned_cols=70 Identities=34% Similarity=0.605 Sum_probs=65.9
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++...++++|..+|.+++|.|+.+||..+++.+|..++..+++.+|..+|.|++|.|+|+||+.++..
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999999999998754
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=117.86 Aligned_cols=142 Identities=21% Similarity=0.365 Sum_probs=105.0
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEec--ccccCChhcHHHHHHHHHHHHHccC-CCCeeEEEEEEEeC---CeEEE
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSIS--SRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYEDR---HSVNL 145 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~~~~~~~~~---~~~~l 145 (480)
.+.|+.|.++.||++... +..+++|+.. ..... .....+.+|+.+++.+.. +..+++++.++.+. +..++
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 577899999999998865 3678999875 32211 123567889999999874 34578899988766 45899
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------------------------------------- 186 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~--------------------------------------- 186 (480)
||||++|..+.+.. ...++......++.+++..|..||+
T Consensus 119 vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999998774421 2347788888999999999999997
Q ss_pred -------------------cCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 187 -------------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 187 -------------------~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.+++|+|++|.|||++.++ ...+.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence 3689999999999996322 13468999998875
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=96.73 Aligned_cols=69 Identities=19% Similarity=0.321 Sum_probs=61.8
Q ss_pred HHHHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+..+.++|+.|| .|++ |+|+.+||+.+|+. +|..+++.+++.++..+|.|+||.|+|+||+.++..
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 445678999999997 8887 99999999999986 467889999999999999999999999999998653
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=107.78 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=85.1
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCC---------CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGT---------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~---------~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~ 445 (480)
|..+|..+|.|++|.|+.+||..++..... ......+..+|..+|.|++|.|+++||..++.... .+.+
T Consensus 62 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~ 139 (185)
T 2sas_A 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCA 139 (185)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCS
T ss_pred HHHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHH
Confidence 457799999999999999999998876521 22357889999999999999999999999986654 4567
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
++..+|+.+|.|++|.|+.+|+..+...++
T Consensus 140 ~~~~~~~~~D~d~dG~i~~~ef~~~~~~~~ 169 (185)
T 2sas_A 140 DVPAVYNVITDGGKVTFDLNRYKELYYRLL 169 (185)
T ss_dssp SHHHHHHHHHTTTTSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHh
Confidence 899999999999999999999999888765
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=3e-11 Score=108.01 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=89.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-------cccccHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-------NRVEREE 445 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-------~~~~~~~ 445 (480)
..+..+|..+|.|++|.|+.+||..++...........+..+|..+|.|++|.|+++||..++... .....++
T Consensus 73 ~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~ 152 (204)
T 3e3r_A 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDE 152 (204)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHH
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHH
Confidence 346778899999999999999999999887665567789999999999999999999999998743 2345667
Q ss_pred HHHHHHHHhcC-CCCCceehhhhHHHHHHHH
Q 011647 446 HLYKAFEYFDK-DNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 446 ~~~~~F~~~D~-d~~G~i~~~e~~~~~~~~~ 475 (480)
.+..+|+.+|. |++|.|+.+|+..+...++
T Consensus 153 ~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 153 VLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 89999999998 9999999999999888776
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.21 E-value=1e-11 Score=104.48 Aligned_cols=97 Identities=20% Similarity=0.106 Sum_probs=49.9
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCC----C-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc--------cc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGT----R-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMN--------RV 441 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~----~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~--------~~ 441 (480)
-...|..+|.|++|.|+.+||..++..+.. . ...+++..+|..+|.|++|.|+++||..++.... ..
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 357899999999999999999998877522 1 2356788899999999999999999999876542 12
Q ss_pred ccHHHH----HHHHHHhcCCCCCceehhhhHHHH
Q 011647 442 EREEHL----YKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 442 ~~~~~~----~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
.+.+++ ..+|+.+|.|+||.|+.+|+..++
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 333443 677799999999999999997654
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.21 E-value=5.9e-11 Score=94.54 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=79.3
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cccccHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKA 450 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~~~~~~~~~~ 450 (480)
.+.++|..+| ++|.|+.+||..++... .....++..+|..+|.|++|.|+.+||..++... ....+.+++..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 4556677777 78999999999887543 3457889999999999999999999999988776 455788899999
Q ss_pred HHHhcCCCCCceehhhhHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
|+.+|.|++|.|+.+|+..+..
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 86 LADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999887653
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-11 Score=99.81 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=80.9
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhc---ccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLP---KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~---~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~ 449 (480)
..+..+|..+|.+++|.|+.+||..++. ..+...+..++..+|..+|.|++|.|+++||..++....... +..
T Consensus 36 ~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~ 111 (134)
T 1jfj_A 36 QLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAE 111 (134)
T ss_dssp HHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHH
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH----HHH
Confidence 4577889999999999999999999997 334444567799999999999999999999999987654222 899
Q ss_pred HHHHhcCCCCCceehhhhHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
+|+.+|.|++|.|+.+|+..+.
T Consensus 112 ~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 112 QVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHhCCCCCCcEeHHHHHHHh
Confidence 9999999999999999998754
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.20 E-value=7.3e-11 Score=94.14 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=83.6
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---ccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRV 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~ 441 (480)
..+++++ +.++|..+| ++|.|+.+||..++... .....++..+|..+|.|++|.|+.+||..++... ...
T Consensus 4 ~~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (109)
T 1rwy_A 4 DLLSAED---IKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD 76 (109)
T ss_dssp HHSCHHH---HHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CcCCHHH---HHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCC
Confidence 3445544 556777777 89999999999988543 3457889999999999999999999999998766 455
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+.+++..+|+.+|.|++|.|+.+|+..+..
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 77 LSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 7788999999999999999999999987754
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.20 E-value=1.6e-11 Score=130.30 Aligned_cols=97 Identities=21% Similarity=0.337 Sum_probs=90.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.||.|++|.|+.+||..+|..+|..+++++++.++..+| |++|.|+|+||+.++... +.+..+|+
T Consensus 605 ~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~------~~l~~~F~ 677 (714)
T 3bow_A 605 QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFK 677 (714)
T ss_dssp HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH------HHHHHHHS
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence 56889999999999999999999999999999999999999999999 999999999999988643 48899999
Q ss_pred HhcCCCCCceehhhhHHHHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+|+|++|.|+.+|++.+...++-
T Consensus 678 ~~D~d~dG~Is~~el~~l~~~~~~ 701 (714)
T 3bow_A 678 QLDPENTGTIQLDLISWLSFSVLG 701 (714)
T ss_dssp SSCSSCCSEEEEEHHHHHHHHHHC
T ss_pred HhCCCCCCcEEHHHHHHHHHHHHH
Confidence 999999999999999999888763
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.20 E-value=2.1e-11 Score=104.50 Aligned_cols=100 Identities=23% Similarity=0.244 Sum_probs=85.4
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccC----CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~ 449 (480)
.+..+|..+|.|++|.|+.+||..++.... .......+..+|..+|.|++|.|+.+||..++.......+.+++..
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~ 135 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 135 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH
Confidence 466788899999999999999999887753 3445678999999999999999999999999887766678899999
Q ss_pred HHHHhcCCCCCceehhhhHHHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+|+.+|.|++|.|+.+|+..+...
T Consensus 136 ~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 136 LMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp HHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHc
Confidence 999999999999999999887653
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.2e-11 Score=101.80 Aligned_cols=99 Identities=5% Similarity=0.054 Sum_probs=85.2
Q ss_pred hHHHhhccc-CCCCCCcccHHHHhhhhccc------CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHH
Q 011647 374 GLKEMFKSM-DTDNSGTITFEELKAGLPKL------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446 (480)
Q Consensus 374 ~~~~~F~~~-D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 446 (480)
.+..+|..+ |.+++|.|+..||..++... ........+..+|..+|.|++|.|+.+||..++.......+.++
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 120 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE 120 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH
Confidence 466788899 99999999999999998876 44556788999999999999999999999999887766778899
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+..+|+.+|.|++|.|+.+|+..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 121 VDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 99999999999999999999987754
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-11 Score=134.83 Aligned_cols=107 Identities=18% Similarity=0.329 Sum_probs=95.8
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~ 442 (480)
...++.++...++++|..||.|++|.|+.+||..++..+|..++..+++.+|..+|.|++|.|+|+||+.++... ....
T Consensus 716 ~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 795 (863)
T 1sjj_A 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTD 795 (863)
T ss_dssp CCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCS
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 345667788999999999999999999999999999999999999999999999999999999999999987653 2345
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
..+.+..+|+.| .|++|+||.+|++.+.
T Consensus 796 ~~~~l~~aF~~~-~d~~G~Is~~El~~~l 823 (863)
T 1sjj_A 796 TADQVMASFKIL-AGDKNYITVDELRREL 823 (863)
T ss_dssp SSHHHHHHHHGG-GTSSSEEEHHHHHHHS
T ss_pred CHHHHHHHHHHH-hCCCCcCcHHHHHHHC
Confidence 567899999999 8999999999998775
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-11 Score=108.29 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=80.0
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc--cccccHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM--NRVEREEHLYKA 450 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~--~~~~~~~~~~~~ 450 (480)
..+..+|..+|.|++|.|+.+||..++.........+.+..+|..+|.|++|.|+.+||..++... ....+++++..+
T Consensus 93 ~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l 172 (197)
T 3pm8_A 93 PDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSL 172 (197)
T ss_dssp HHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHH
Confidence 346788999999999999999999988776555667899999999999999999999999998876 445677889999
Q ss_pred HHHhcCCCCCceehhhhHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
|+.+|.|+||.|+.+||..++.
T Consensus 173 ~~~~D~d~dG~Is~~EF~~~l~ 194 (197)
T 3pm8_A 173 LQEVDLNGDGEIDFHEFMLMMS 194 (197)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHcCCCCCcCcHHHHHHHHH
Confidence 9999999999999999988764
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.7e-11 Score=93.51 Aligned_cols=68 Identities=25% Similarity=0.298 Sum_probs=62.7
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++..+++++|+.||.|++|+|+.+|++.+++.+| .+.++++.++..+|.|++|.|+|+||+.++.
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 4567888999999999999999999999999999986 6789999999999999999999999999864
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.19 E-value=6.9e-11 Score=94.30 Aligned_cols=94 Identities=13% Similarity=0.079 Sum_probs=79.4
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cccccHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKA 450 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~~~~~~~~~~ 450 (480)
++.++|..+| ++|.|+.+||..++... .....++..+|..+|.|++|.|+.+||..++... ....+.+++..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 86 (109)
T 1bu3_A 11 DVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAF 86 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHH
Confidence 3556677777 88999999999887543 3357889999999999999999999999988766 556788899999
Q ss_pred HHHhcCCCCCceehhhhHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~ 471 (480)
|+.+|.|++|.|+.+|+..+.
T Consensus 87 ~~~~D~~~dg~i~~~eF~~~~ 107 (109)
T 1bu3_A 87 LKAGDSDGDGAIGVDEWAALV 107 (109)
T ss_dssp HHHHCTTCSSEECHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHH
Confidence 999999999999999998765
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2.2e-11 Score=102.50 Aligned_cols=97 Identities=15% Similarity=0.297 Sum_probs=80.7
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~ 453 (480)
+..+|..+|.+++|.|+.+||..++... .......++..+|+.+|.|++|.|+.+||..++.......+.+++..+|+.
T Consensus 44 ~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (143)
T 2obh_A 44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 123 (143)
T ss_dssp HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 5567888899999999999998877642 222234678889999999999999999999998776666788899999999
Q ss_pred hcCCCCCceehhhhHHHH
Q 011647 454 FDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 454 ~D~d~~G~i~~~e~~~~~ 471 (480)
+|.|++|.|+.+|+..++
T Consensus 124 ~D~d~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 124 ADRDGDGEVSEQEFLRIM 141 (143)
T ss_dssp HCTTSSSSBCHHHHHHHH
T ss_pred hCCCCCCcEeHHHHHHHH
Confidence 999999999999988764
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.2e-11 Score=115.19 Aligned_cols=182 Identities=16% Similarity=0.228 Sum_probs=124.4
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCC--eeEEEEEEEeCC---eEEEE
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN--IVELKGAYEDRH---SVNLI 146 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~--iv~~~~~~~~~~---~~~lv 146 (480)
.+.++.|.+..||++. ..+++|+.... .....+.+|..+++.+..+.. +++++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 3568999999999863 46899986422 335778999999998853433 455655543333 35789
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS---------------------------------------- 186 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---------------------------------------- 186 (480)
|++++|.+|.+... ..++.+....++.+++..|..||+
T Consensus 95 m~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp EECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred EcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99999988865433 347788888888999998888886
Q ss_pred ------------------cCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCccccCCCCccc---ccccccc--
Q 011647 187 ------------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY---VAPEVLR-- 243 (480)
Q Consensus 187 ------------------~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y---~aPE~~~-- 243 (480)
..++|+|++|.||+++.+ ....+.|+||+.+....+.... .....+ ..|+...
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDNDF---ISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTHHH---HTTCCTTTSCCHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHHHH---HHHHhhccccCHHHHHHH
Confidence 137999999999999632 1455789999998764322111 111111 2333221
Q ss_pred -ccCCC------------chhHHHHHHHHHHHHhCCCCC
Q 011647 244 -RNYGA------------EADIWSAGVILYILLSGVPPF 269 (480)
Q Consensus 244 -~~~~~------------~~DiwslG~il~~lltg~~pf 269 (480)
..|+. ..+.|+++.++|.+.+|..+|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11111 258999999999999998776
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-11 Score=97.82 Aligned_cols=87 Identities=17% Similarity=0.211 Sum_probs=65.1
Q ss_pred HHHHhhHHHhhcccCC-CCCC-cccHHHHhhhhc-ccCCC-----CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc
Q 011647 369 EEEIMGLKEMFKSMDT-DNSG-TITFEELKAGLP-KLGTR-----LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR 440 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~-~~~g-~i~~~e~~~~l~-~~~~~-----~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~ 440 (480)
++++..+.++|+.||. |++| +|+.+||+.+|+ .+|.. .+..+++.+|..+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~- 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT- 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence 4456789999999995 9999 999999999999 67742 5889999999999999999999999999876432
Q ss_pred cccHHHHHHHHHHhcCCCCCc
Q 011647 441 VEREEHLYKAFEYFDKDNSTS 461 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~ 461 (480)
......|...| +++|.
T Consensus 87 ----~~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 87 ----WASHEKMHEGD-EGPGH 102 (113)
T ss_dssp ----HHHHC------------
T ss_pred ----HHHHHHHhhCC-CCCcc
Confidence 45677888888 88885
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.1e-11 Score=101.28 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=87.5
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKAF 451 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~~~~~~~F 451 (480)
.+..+|..+|.+++|.|+.+||..++...... .....+..+|..+|.|++|.|+.+||..++.. .....+.+++..+|
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 45678899999999999999999999887544 45678999999999999999999999999876 45566777777777
Q ss_pred HH----hcCCCCCceehhhhHHHHHHHHH
Q 011647 452 EY----FDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 452 ~~----~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+. +|.|++|.|+.+|+..+...+.-
T Consensus 119 ~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 147 (155)
T 3ll8_B 119 DKTIINADKDGDGRISFEEFCAVVGGLDI 147 (155)
T ss_dssp HHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence 77 99999999999999988876543
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.7e-11 Score=100.02 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=86.1
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcc-cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
.+..+|..+|.+++|.|+.+||..++.. +........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+
T Consensus 43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 122 (142)
T 2bl0_C 43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLG 122 (142)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 4667888999999999999999999886 455567889999999999999999999999999887766778899999999
Q ss_pred HhcCCCCCceehhhhHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~ 471 (480)
.+| |++|.|+.+|+..++
T Consensus 123 ~~d-~~dg~i~~~eF~~~~ 140 (142)
T 2bl0_C 123 ITE-TEKGQIRYDNFINTM 140 (142)
T ss_dssp HHC-CSSSEECSHHHHTTT
T ss_pred HhC-CCCCcEeHHHHHHHH
Confidence 999 999999999987653
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=92.97 Aligned_cols=101 Identities=17% Similarity=0.196 Sum_probs=82.5
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---ccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRV 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~ 441 (480)
..++.++ +.++|..+| ++|.|+.+||..++.. ......++..+|..+|.|++|.|+.+||..++... ...
T Consensus 5 ~~~t~~e---~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (110)
T 1pva_A 5 DLLKADD---IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77 (110)
T ss_dssp HHSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred ccCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence 3445544 556666677 8899999999998853 23457889999999999999999999999998776 455
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+.+++..+|+.+|.|++|.|+.+|+..+..
T Consensus 78 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 7788999999999999999999999987754
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.17 E-value=8.4e-11 Score=93.65 Aligned_cols=99 Identities=16% Similarity=0.126 Sum_probs=81.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cccc
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~~ 442 (480)
.+++++ +.++|..+| ++|.|+.+||..++... .....++..+|..+|.|++|.|+.+||..++... ....
T Consensus 5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 5 ILSAED---IAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 345544 455666677 88999999999887532 3457889999999999999999999999988776 4456
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
+.+++..+|+.+|.|++|.|+.+|+..+.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMV 106 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 78899999999999999999999998765
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.17 E-value=3.3e-11 Score=96.03 Aligned_cols=70 Identities=21% Similarity=0.349 Sum_probs=63.0
Q ss_pred hHHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 368 SEEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
..+++..++++|+.|| .|++| +|+.+||+.+|+. +|..+++.+++.++..+|.|+||.|+|+||+.++..
T Consensus 17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4556788999999999 89997 9999999999986 677888999999999999999999999999998753
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.17 E-value=8e-11 Score=99.62 Aligned_cols=98 Identities=18% Similarity=0.239 Sum_probs=83.1
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
.+..+|..+|.+++|.|+..||..++... ......+++..+|+.+|.|++|.|+.+||..++.......+.+++..+|+
T Consensus 47 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~ 126 (148)
T 2lmt_A 47 ELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIR 126 (148)
T ss_dssp HHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHH
Confidence 35567788899999999999998877653 45556788899999999999999999999998887777788889999999
Q ss_pred HhcCCCCCceehhhhHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~ 471 (480)
.+|.|+||.|+.+||.+++
T Consensus 127 ~~D~d~dG~I~~~EF~~~m 145 (148)
T 2lmt_A 127 EADFDGDGMINYEEFVWMI 145 (148)
T ss_dssp HHCCSCCSSEEHHHHHHHH
T ss_pred HhCCCCCCeEeHHHHHHHH
Confidence 9999999999999988765
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.8e-11 Score=86.49 Aligned_cols=64 Identities=22% Similarity=0.500 Sum_probs=60.2
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.++++|+.+|.+++|.|+.+||..++..+|..++..+++.+|..+|.|++|.|+|+||+.++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4778999999999999999999999999999999999999999999999999999999998753
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-11 Score=93.02 Aligned_cols=72 Identities=18% Similarity=0.203 Sum_probs=67.2
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHH---HHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE---VRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
..+++++...++++|..||.+++|.|+..||..+++.+|..++..+ +..++..+|.|++|.|+| ||+.++..
T Consensus 6 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 4567888899999999999999999999999999999999999999 999999999999999999 99998754
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.3e-12 Score=130.49 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=33.6
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++++|..||.|++|.|+.+||..+|+.+|..++.++++.+|..+|.|++|.|+|+||+.++.... ..+++..+|+
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---~~~el~~aF~ 87 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---QRAEIDRAFE 87 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHT---CCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---cHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999876543 2368999999
Q ss_pred HhcCCCCCceehhhhHHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.||+| +|+|+.+|+++++...
T Consensus 88 ~fD~~-~G~Is~~EL~~fL~~~ 108 (624)
T 1djx_A 88 EAAGS-AETLSVERLVTFLQHQ 108 (624)
T ss_dssp HHHTT-SSSEEHHHHHHHHHHT
T ss_pred HhcCC-CCeecHHHHHHHHHHH
Confidence 99986 9999999998887653
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.8e-11 Score=92.46 Aligned_cols=72 Identities=24% Similarity=0.430 Sum_probs=65.5
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+...+++++...++++|+.+|.|++|.|+.+||..++..+| .+..+++.+|..+|.|++|.|+|+||+.++.
T Consensus 17 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 17 QGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp --CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred HhccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 34567888999999999999999999999999999999998 6889999999999999999999999998864
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.3e-11 Score=86.80 Aligned_cols=65 Identities=32% Similarity=0.621 Sum_probs=61.4
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
...++++|..+|.+++|.|+.+||..++..+|..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 45688999999999999999999999999999999999999999999999999999999998874
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.15 E-value=9e-11 Score=100.44 Aligned_cols=99 Identities=13% Similarity=0.198 Sum_probs=87.2
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
.+..+|..+|.+++|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+
T Consensus 60 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~ 139 (161)
T 3fwb_A 60 EILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIE 139 (161)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 36678888999999999999999988763 33445678999999999999999999999999987777788899999999
Q ss_pred HhcCCCCCceehhhhHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+|.|++|.|+.+|+..+..
T Consensus 140 ~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 140 EFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp TTCSSSSSSEEHHHHHHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHh
Confidence 99999999999999988765
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.14 E-value=6e-11 Score=101.34 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=85.3
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCC-----CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-----LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
.+..+|..+|.+++|.|+.+||..++...... .....+..+|..+|.|++|.|+.+||..++.......+.+++.
T Consensus 51 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~ 130 (158)
T 2jnf_A 51 TIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLD 130 (158)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHH
Confidence 45678888999999999999999998765322 4456789999999999999999999999988776667889999
Q ss_pred HHHHHhcCCCCCceehhhhHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
.+|+.+|.|++|.|+.+|+..+.
T Consensus 131 ~~~~~~D~d~dg~i~~~eF~~~~ 153 (158)
T 2jnf_A 131 AMIDEIDADGSGTVDFEEFMGVM 153 (158)
T ss_dssp HHHHHHCSSCCSEECSHHHHHHT
T ss_pred HHHHHhCCCCCCcEeHHHHHHHH
Confidence 99999999999999999998764
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.1e-11 Score=93.71 Aligned_cols=68 Identities=22% Similarity=0.271 Sum_probs=62.4
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++...++++|+.||.|++|+|+.+|++.+++.+| .+..+++.++..+|.|++|.|+|+||+.++.
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4567788999999999999999999999999999986 5789999999999999999999999998864
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.14 E-value=8.4e-11 Score=103.80 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=85.5
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCC-------CCCHHHH----HHHHHhhcCCCCcceeHHHHHHHHccccccc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGT-------RLSESEV----RQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-------~~~~~~~----~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 442 (480)
.+..+|..+|.|++|.|+.+||..++..... ....+.+ +.+|..+|.|++|.|+.+||..++.......
T Consensus 63 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~ 142 (191)
T 1uhk_A 63 AVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQ 142 (191)
T ss_dssp HHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 5778999999999999999999988765411 1111223 3899999999999999999999987766667
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+++..+|+.+|.|++|.|+.+|+..+...++
T Consensus 143 ~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~~ 175 (191)
T 1uhk_A 143 SSEDCEETFRVCDIDESGQLDVDEMTRQHLGFW 175 (191)
T ss_dssp SHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 788999999999999999999999999988876
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1e-10 Score=103.63 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=81.3
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCC-------CCCHHHH----HHHHHhhcCCCCcceeHHHHHHHHccccccc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGT-------RLSESEV----RQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-------~~~~~~~----~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 442 (480)
.+..+|..+|.|++|.|+.+||..++..... ....+.+ ..+|..+|.|++|.|+.+||..++.......
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~ 146 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISP 146 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 4778899999999999999999988765421 1111223 3899999999999999999999987766667
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+++..+|+.+|.|++|.|+.+|+..+...++
T Consensus 147 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 179 (195)
T 1qv0_A 147 SQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFW 179 (195)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHc
Confidence 788999999999999999999999999888776
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=97.22 Aligned_cols=98 Identities=11% Similarity=0.084 Sum_probs=86.2
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCC--CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGT--RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
+..+ ..+|.+++|.|+..||..++..... ......+..+|..+|.|++|.|+.+||..++.......+.+++..+|+
T Consensus 49 ~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~ 127 (156)
T 1wdc_C 49 VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 127 (156)
T ss_dssp HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 4455 7889999999999999999887643 556788999999999999999999999999887766678899999999
Q ss_pred H--hcCCCCCceehhhhHHHHHH
Q 011647 453 Y--FDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 453 ~--~D~d~~G~i~~~e~~~~~~~ 473 (480)
. +|.|++|.|+.+|+..+...
T Consensus 128 ~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 128 LTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp HHTCCCCTTSEEEHHHHHHHHHH
T ss_pred HhCCCCCCCCcEeHHHHHHHHhc
Confidence 9 99999999999999887653
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=7.6e-11 Score=92.64 Aligned_cols=70 Identities=20% Similarity=0.296 Sum_probs=60.9
Q ss_pred hHHHHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-cC----CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 368 SEEEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-LG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.+..+..+.++|+.|| .|++ |+|+.+||+.+|+. +| ...+..+++.++..+|.|+||.|+|+||+.++..
T Consensus 8 le~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 8 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 3556788999999998 7775 89999999999986 54 5568999999999999999999999999998754
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.13 E-value=4.8e-11 Score=103.19 Aligned_cols=101 Identities=25% Similarity=0.311 Sum_probs=85.9
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
..+..+|..+|.+++|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|
T Consensus 64 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~ 143 (169)
T 3qrx_A 64 EEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143 (169)
T ss_dssp HHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 346677888999999999999999988763 2223456788899999999999999999999988777778889999999
Q ss_pred HHhcCCCCCceehhhhHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+.+|.|++|.|+.+|+..+...
T Consensus 144 ~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 144 AEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHhCCCCCCCEeHHHHHHHHHh
Confidence 9999999999999999887653
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.2e-10 Score=91.13 Aligned_cols=70 Identities=24% Similarity=0.431 Sum_probs=66.4
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+++...++.+|..||.|++|.|+.+||..++..+|..++..+++.++..+|.|++|.|+|+||+.++...
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 6778899999999999999999999999999999999999999999999999999999999999988654
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=9.8e-11 Score=93.61 Aligned_cols=68 Identities=22% Similarity=0.376 Sum_probs=62.8
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+++++...++++|+.||.|++|+|+.+||+.++. +..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 5677888999999999999999999999999998 6678899999999999999999999999999864
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=105.97 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=83.7
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCC-CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc----ccccccH----H
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGNGTIDYIEFITATMH----MNRVERE----E 445 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~----~~~~~~~----~ 445 (480)
+.++|..+|.|++|.|+.+||..++..++. .....++..+|..+|.|++|.|+++||..++.. .....+. +
T Consensus 87 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~ 166 (226)
T 2zfd_A 87 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 166 (226)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 457899999999999999999999988764 345678999999999999999999999998742 2222333 3
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+..+|+.+|.|+||.|+.+|+..+......
T Consensus 167 ~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~ 197 (226)
T 2zfd_A 167 IIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 197 (226)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHhChH
Confidence 3578889999999999999999988876543
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.12 E-value=6.6e-11 Score=100.01 Aligned_cols=99 Identities=22% Similarity=0.282 Sum_probs=83.2
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
.+..+|..+|.+++|.|+.+||..++... .......++..+|..+|.|++|.|+.+||..++.......+.+++..+|+
T Consensus 47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~ 126 (148)
T 1exr_A 47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR 126 (148)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 35678888999999999999998887653 22234567888999999999999999999999877766778889999999
Q ss_pred HhcCCCCCceehhhhHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+|.|++|.|+.+|+..++.
T Consensus 127 ~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 127 EADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHCSSSSSSBCHHHHHHHHH
T ss_pred HhCCCCCCcEeHHHHHHHHc
Confidence 99999999999999987653
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1e-10 Score=92.27 Aligned_cols=67 Identities=22% Similarity=0.343 Sum_probs=62.2
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++..+++++|+.||. +||+|+.+|++.+|..+| ++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~ 75 (106)
T 1eh2_A 9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 75 (106)
T ss_dssp SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 467788999999999999 999999999999999986 6799999999999999999999999999864
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=7.8e-11 Score=90.80 Aligned_cols=69 Identities=20% Similarity=0.305 Sum_probs=59.2
Q ss_pred HHHHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-cC----CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-LG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+..++++|+.|| .|++ |+|+.+||+.+++. +| ...++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 456688999999998 6775 89999999999986 54 4568999999999999999999999999998754
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.12 E-value=9.1e-11 Score=91.65 Aligned_cols=69 Identities=20% Similarity=0.319 Sum_probs=62.2
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++..++++|+.|| .|++| +|+.+||+.+++. +|..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 445678999999997 89998 9999999999986 677889999999999999999999999999998754
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.12 E-value=3.9e-11 Score=89.45 Aligned_cols=65 Identities=37% Similarity=0.622 Sum_probs=60.8
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
++++.+|..+|.+++|.|+.+||..+++.+| .++..+++.++..+|.|++|.|+|+||+.++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 4678999999999999999999999999999 9999999999999999999999999999987654
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-10 Score=103.27 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=84.2
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCC-----------------CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGT-----------------RLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----------------~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+|..+|.|++|.|+.+||..++..... ......+..+|..+|.|++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 667899999999999999999999987652 344678999999999999999999999999877
Q ss_pred c-cccccHHHHHHHHHH----hcCCCCCceehhhhHHHHHH
Q 011647 438 M-NRVEREEHLYKAFEY----FDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 438 ~-~~~~~~~~~~~~F~~----~D~d~~G~i~~~e~~~~~~~ 473 (480)
. ....+.+++..+|+. +|.|++|.|+.+||..+...
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 6 555677777777777 99999999999999876543
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-10 Score=103.55 Aligned_cols=102 Identities=20% Similarity=0.143 Sum_probs=83.8
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc----ccccccH----
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMH----MNRVERE---- 444 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~----~~~~~~~---- 444 (480)
.+.++|..+|.|++|.|+.+||..++..+... ....++..+|..+|.|++|.|+++||..++.. .....+.
T Consensus 75 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~ 154 (207)
T 2ehb_A 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIE 154 (207)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHH
Confidence 35678999999999999999999999988644 45677999999999999999999999998742 2222333
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|.|++|.|+.+|+..+.....
T Consensus 155 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 185 (207)
T 2ehb_A 155 VMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185 (207)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHCG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 3357889999999999999999998877543
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=98.21 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=83.6
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCC-----CHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHL 447 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~~~~ 447 (480)
.+..+|..+|.+++|.|+.+||..++....... ....+..+|..+|.|++|.|+.+||..++.. .....+.+++
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~ 127 (153)
T 3ox6_A 48 ELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDI 127 (153)
T ss_dssp HHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHH
T ss_pred HHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHH
Confidence 356678888999999999999999887643322 2577888999999999999999999999877 6666788999
Q ss_pred HHHHHHhcCCCCCceehhhhHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
..+|+.+|.|++|.|+.+|+..+.
T Consensus 128 ~~~~~~~d~~~dg~i~~~eF~~~~ 151 (153)
T 3ox6_A 128 EEIIRDVDLNGDGRVDFEEFVRMM 151 (153)
T ss_dssp HHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred HHHHHHhCCCCCCeEeHHHHHHHH
Confidence 999999999999999999987754
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=112.02 Aligned_cols=106 Identities=25% Similarity=0.321 Sum_probs=87.4
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 442 (480)
...+++++ +.++|..+|.|++|.|+.+||..++... ......+++..+|+.+|.|++|.|+.+||..++.......
T Consensus 332 G~~~TeeE---I~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~L 408 (440)
T 3u0k_A 332 GQNPTEAE---LQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 408 (440)
T ss_dssp TCCCCHHH---HHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCC
T ss_pred CCCCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCC
Confidence 33445543 5678889999999999999999887653 3334567899999999999999999999999988777778
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+++++..+|+.+|.|+||.|+.+||.+++.
T Consensus 409 SdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 409 TDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 889999999999999999999999988763
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=90.44 Aligned_cols=66 Identities=32% Similarity=0.640 Sum_probs=61.8
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
..+.++++|..||.|++|.|+.+||..+++.+|..++.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 446688999999999999999999999999999999999999999999999999999999998864
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.10 E-value=7.8e-11 Score=91.37 Aligned_cols=69 Identities=25% Similarity=0.411 Sum_probs=56.5
Q ss_pred HHHHhhHHHhhcccC-CCC-CCcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDN-SGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~-~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++..++++|+.|| .|+ +|+|+.+||+.+|+. +|..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 445678999999999 788 589999999999986 566778899999999999999999999999998754
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-11 Score=93.40 Aligned_cols=73 Identities=68% Similarity=1.015 Sum_probs=64.3
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
+...++.++...++++|..+|.+++|.|+.+||..+++.+|..++..+++.++..+|.|++|.|+|+||+.++
T Consensus 13 ~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3345566667789999999999999999999999999999999999999999999999999999999998754
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=89.80 Aligned_cols=68 Identities=25% Similarity=0.444 Sum_probs=61.9
Q ss_pred HHHHhhHHHhhcccCCCCCC---cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMDTDNSG---TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g---~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+..+.++|+.|| +++| +|+.+||+.+++. +|..++..+++.++..+|.|+||.|+|+||+.++..
T Consensus 5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 455678999999999 7766 9999999999999 899999999999999999999999999999998754
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=7.7e-11 Score=120.17 Aligned_cols=102 Identities=18% Similarity=0.134 Sum_probs=90.1
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
...+.++|..+|.|++|.|+.+||..++.......+.+++..+|..+|.|++|.|+++||..++.. ...+++++..+|
T Consensus 381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~ 458 (484)
T 3nyv_A 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVL 458 (484)
T ss_dssp HHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHH
Confidence 356788999999999999999999999887755566788999999999999999999999998765 356788999999
Q ss_pred HHhcCCCCCceehhhhHHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+|.|+||.|+.+||..++..+.
T Consensus 459 ~~~D~d~dG~i~~~Ef~~~~~~~~ 482 (484)
T 3nyv_A 459 SEVDKNNDGEVDFDEFQQMLLKLC 482 (484)
T ss_dssp HHHCTTCCSEEEHHHHHHHHHHTT
T ss_pred HHhcCCCCCcCCHHHHHHHHHhhh
Confidence 999999999999999999887653
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.2e-11 Score=96.13 Aligned_cols=68 Identities=28% Similarity=0.290 Sum_probs=61.9
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++..+++++|+.||.|++|+|+.+|++.+++.+| ++.++++.++..+|.|++|.|+|+||+.++.
T Consensus 16 ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~ 83 (110)
T 1iq3_A 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 4666778899999999999999999999999999886 5677899999999999999999999999864
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.6e-10 Score=100.99 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=82.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc--ccccc---HHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM--NRVER---EEHL 447 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~--~~~~~---~~~~ 447 (480)
..+..+|..+|.|++|.|+.+||..++.... ....+.+..+|..+|.|++|.|+.+||..++... ....+ .+++
T Consensus 87 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~ 165 (191)
T 3k21_A 87 YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRV 165 (191)
T ss_dssp TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHH
Confidence 4567889999999999999999999876543 3567889999999999999999999999998652 22222 3579
Q ss_pred HHHHHHhcCCCCCceehhhhHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
..+|+.+|.|+||.|+.+||..++
T Consensus 166 ~~~~~~~D~d~dG~Is~~EF~~~~ 189 (191)
T 3k21_A 166 KRMIRDVDKNNDGKIDFHEFSEMM 189 (191)
T ss_dssp HHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred HHHHHHhcCCCCCeECHHHHHHHH
Confidence 999999999999999999998765
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=97.85 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=84.3
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
.+..+|..+|.+++|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 127 (147)
T 4ds7_A 48 EVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLR 127 (147)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 36678888899999999999999988764 33344578888999999999999999999999987777788899999999
Q ss_pred HhcCCCCCceehhhhHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~ 471 (480)
.+| |++|.|+.+|+..+.
T Consensus 128 ~~d-~~dg~i~~~eF~~~l 145 (147)
T 4ds7_A 128 EVS-DGSGEINIKQFAALL 145 (147)
T ss_dssp HHS-SSCSSEEHHHHHHHT
T ss_pred Hhc-CCCCcCcHHHHHHHH
Confidence 999 999999999998764
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=101.52 Aligned_cols=97 Identities=24% Similarity=0.301 Sum_probs=63.6
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~ 453 (480)
+..+|..+|.|++|.|+.+||..++.... .......+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.
T Consensus 49 ~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~ 128 (179)
T 2f2o_A 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128 (179)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45566677777777777777776665431 12233556667777777777777777777776655555566677777777
Q ss_pred hcCCCCCceehhhhHHHH
Q 011647 454 FDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 454 ~D~d~~G~i~~~e~~~~~ 471 (480)
+|.|++|.|+.+|+..+.
T Consensus 129 ~D~~~dg~i~~~eF~~~~ 146 (179)
T 2f2o_A 129 ADIDGDGQVNYEEFVQMM 146 (179)
T ss_dssp HCTTCSSSEEHHHHHHHS
T ss_pred cCCCCCCcCcHHHHHHHH
Confidence 777777777777775554
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=99.08 E-value=8.1e-11 Score=88.37 Aligned_cols=68 Identities=38% Similarity=0.598 Sum_probs=62.4
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+....++ +|..||.|++|.|+.+||..++..+| ..++..+++.+|..+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 4456788 99999999999999999999999999 99999999999999999999999999999987653
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.08 E-value=5.9e-11 Score=92.08 Aligned_cols=70 Identities=21% Similarity=0.363 Sum_probs=62.4
Q ss_pred hHHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 368 SEEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.+++...++++|+.|| .|++| +|+.+||+.+++. +|..+++.+++.++..+|.|++|.|+|+||+.++..
T Consensus 7 ~e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 7 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 3455778999999999 89998 9999999999986 567789999999999999999999999999998753
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=7.5e-11 Score=104.19 Aligned_cols=96 Identities=23% Similarity=0.256 Sum_probs=82.8
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~ 453 (480)
.+..+|..+|.|++|.|+.+||..++..+........+..+|..+|.|++|.|+.+||..++.... .+.+++..+|+.
T Consensus 47 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~ 124 (188)
T 1s6i_A 47 EIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKE 124 (188)
T ss_dssp HHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 466789999999999999999999988765444556788999999999999999999999886654 456789999999
Q ss_pred hcCCCCCceehhhhHHHH
Q 011647 454 FDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 454 ~D~d~~G~i~~~e~~~~~ 471 (480)
+|.|++|.|+.+||..++
T Consensus 125 ~D~d~dG~Is~~EF~~~~ 142 (188)
T 1s6i_A 125 IDQDNDGQIDYGEFAAMM 142 (188)
T ss_dssp HCSSSSSEEETTHHHHTT
T ss_pred HCCCCCCcEeHHHHHHHH
Confidence 999999999999997765
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=119.00 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=90.9
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+.++|..+|.|+||.|+.+||..++.........+++..+|+.+|.|++|.|+.+||..++.. ...+++++..+|+
T Consensus 399 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~ 476 (504)
T 3q5i_A 399 EEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLG 476 (504)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHH
Confidence 45788999999999999999999999887766667889999999999999999999999998765 3467889999999
Q ss_pred HhcCCCCCceehhhhHHHHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+|.|+||.|+.+||..++..+++
T Consensus 477 ~~D~d~dG~I~~~EF~~~~~~~~~ 500 (504)
T 3q5i_A 477 EADQNKDNMIDFDEFVSMMHKICD 500 (504)
T ss_dssp TTCSSCSSSEEHHHHHHHHHHHC-
T ss_pred HhCCCCCCcEeHHHHHHHHHHhcc
Confidence 999999999999999999887654
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.08 E-value=4.5e-11 Score=94.35 Aligned_cols=70 Identities=17% Similarity=0.303 Sum_probs=59.9
Q ss_pred HHHHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-cCCCC-CHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-LGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-~~~~~-~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
++++..++++|+.|| .|++ |+|+.+||+.+|+. +|... ++.+++.++..+|.|+||.|+|+||+.++...
T Consensus 18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 455678999999999 7986 79999999999986 66443 34789999999999999999999999987543
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-10 Score=99.28 Aligned_cols=99 Identities=23% Similarity=0.234 Sum_probs=84.7
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCC-CC---CHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGT-RL---SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~---~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~ 449 (480)
.+..+|..+|.+++|.|+.+||..++..... .. ....+..+|..+|.|++|.|+.+||..++.......+.+++..
T Consensus 57 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~ 136 (162)
T 1top_A 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIED 136 (162)
T ss_dssp HHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH
Confidence 4567888999999999999999988876421 11 4567888999999999999999999999887776678889999
Q ss_pred HHHHhcCCCCCceehhhhHHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+|+.+|.|++|.|+.+|+..+..
T Consensus 137 ~~~~~d~~~dg~i~~~eF~~~~~ 159 (162)
T 1top_A 137 LMKDSDKNNDGRIDFDEFLKMME 159 (162)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHhCCCCCCcCcHHHHHHHHh
Confidence 99999999999999999988765
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-10 Score=119.31 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=91.0
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
...+.++|..+|.|++|.|+.+||..++...+...+.+++..+|+.+|.|++|.|+++||..++.. ...+++++..+|
T Consensus 389 ~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~ 466 (494)
T 3lij_A 389 ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMI 466 (494)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHH
Confidence 356788999999999999999999999887766667889999999999999999999999998765 345678899999
Q ss_pred HHhcCCCCCceehhhhHHHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+.+|.|+||.|+.+||..++..++.
T Consensus 467 ~~~D~d~dG~I~~~EF~~~~~~~~~ 491 (494)
T 3lij_A 467 SGIDSNNDGDVDFEEFCKMIQKLCS 491 (494)
T ss_dssp HTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred HHhCCCCCCcCCHHHHHHHHHhhcc
Confidence 9999999999999999999887653
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.4e-10 Score=101.57 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=81.3
Q ss_pred hhcccCCCCCCcccHHHHhhhhc---------ccCCCCC-HHH-HHHHHHhhcCCCCcceeHHHHHHHHccccccccHHH
Q 011647 378 MFKSMDTDNSGTITFEELKAGLP---------KLGTRLS-ESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446 (480)
Q Consensus 378 ~F~~~D~~~~g~i~~~e~~~~l~---------~~~~~~~-~~~-~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 446 (480)
+|..+|.|++|.|+.+||..++. .+..... ..+ +..+|..+|.|++|.|+.+||..++.... .+.++
T Consensus 86 lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~ 163 (208)
T 2hpk_A 86 FFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEA 163 (208)
T ss_dssp HHHHTTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHH
Confidence 44899999999999999999886 4433322 344 78899999999999999999999986655 66778
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+..+|+.+|.|+||.|+.+|+..+....+
T Consensus 164 ~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 192 (208)
T 2hpk_A 164 AYTFFEKADTDKSGKLERTELVHLFRKFW 192 (208)
T ss_dssp HHHHHHHHCTTCCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 99999999999999999999998887764
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.06 E-value=4.9e-11 Score=130.40 Aligned_cols=98 Identities=21% Similarity=0.231 Sum_probs=78.0
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccCC--------CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 442 (480)
+..+++++|..+| +++|.|+.+||..+|..++. .++..+++.++..+|.|++|.|+|+||+.++...
T Consensus 532 ~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~---- 606 (900)
T 1qxp_A 532 IDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI---- 606 (900)
T ss_dssp ---------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH----
T ss_pred HHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence 3788999999999 99999999999999999875 7899999999999999999999999999987654
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.||+|++|+|+.+|++.+...++
T Consensus 607 --~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g 637 (900)
T 1qxp_A 607 --RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAG 637 (900)
T ss_dssp --HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTT
T ss_pred --HHHHHHHHhhCCCCCCeECHHHHHHHHHHhC
Confidence 5899999999999999999999998887654
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.3e-11 Score=85.97 Aligned_cols=63 Identities=30% Similarity=0.479 Sum_probs=57.4
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++|..+|.|++|.|+.+||..++..+|..++..+++.+|..+|.|++|.|+|+||+.++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 467899999999999999999999999988888899999999999999999999999988754
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=8.8e-11 Score=91.73 Aligned_cols=66 Identities=23% Similarity=0.335 Sum_probs=60.1
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++...++++|+.||.|++|+|+.+|++.+++.+| ++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 4457799999999999999999999999999986 57899999999999999999999999998743
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.6e-10 Score=97.88 Aligned_cols=63 Identities=32% Similarity=0.548 Sum_probs=35.2
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+.+.++|+.||.|++|+|+.+||+.+|..+|..+++++++.++..+| |+||.|+|+||+.++.
T Consensus 84 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~ 146 (176)
T 2lhi_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS 146 (176)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHH
Confidence 34555555555555555555555555555555555555555555555 5555555555555554
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.1e-10 Score=87.89 Aligned_cols=70 Identities=20% Similarity=0.282 Sum_probs=59.3
Q ss_pred HHHHhhHHHhhcccCCCC---CCcccHHHHhhhhccc-CCCC----CHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMDTDN---SGTITFEELKAGLPKL-GTRL----SESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~---~g~i~~~e~~~~l~~~-~~~~----~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..+..++++|+.||.++ +|+|+.+||+.+|+.+ +..+ +..+++.++..+|.|+||.|+|+||+.++...
T Consensus 7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 455678999999999963 7999999999999874 3333 36889999999999999999999999987654
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.04 E-value=5e-10 Score=98.04 Aligned_cols=97 Identities=13% Similarity=0.210 Sum_probs=81.8
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|..+|.|++|.|+.+||..++..... .....+..+|..+|.|++|.|+.+||..++. ....+.+++..+|+
T Consensus 73 ~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~ 149 (180)
T 3mse_B 73 WDINRILQALDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFL 149 (180)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHH
Confidence 45778899999999999999999998877543 2347889999999999999999999999987 34567889999999
Q ss_pred HhcCCCC--------CceehhhhHHHHH
Q 011647 453 YFDKDNS--------TSQWKSWNMRLRS 472 (480)
Q Consensus 453 ~~D~d~~--------G~i~~~e~~~~~~ 472 (480)
.+|.|++ |.|+.+|+..++.
T Consensus 150 ~~d~~~d~~~~~~~~G~i~~~eF~~~l~ 177 (180)
T 3mse_B 150 SVHSIKKGIPREHIINKISFQEFKDYML 177 (180)
T ss_dssp HHHTC---------CCCBCHHHHHHHHH
T ss_pred HhhhccCcccccccCCeeeHHHHHHHHH
Confidence 9999999 9999999988765
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-10 Score=119.04 Aligned_cols=103 Identities=18% Similarity=0.193 Sum_probs=76.1
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
...+..+|..+|.|++|.|+.+||..++.........+++..+|..+|.|++|.|+.+||..++.......+.+++..+|
T Consensus 380 ~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~ 459 (486)
T 3mwu_A 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESII 459 (486)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 45678899999999999999999999888777777889999999999999999999999999988776667788999999
Q ss_pred HHhcCCCCCceehhhhHHHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+.+|.|+||.|+.+||..+...+
T Consensus 460 ~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 460 EQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHhCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999999999888765
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=5.6e-10 Score=97.88 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=80.2
Q ss_pred HhhcccCCCCCCc-ccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc-----cccHHHHHH
Q 011647 377 EMFKSMDTDNSGT-ITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-----VEREEHLYK 449 (480)
Q Consensus 377 ~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-----~~~~~~~~~ 449 (480)
++|..+|.+++|. |+.+||..++..+... .....+..+|..+|.|++|.|+.+||..++..... ..+.+++..
T Consensus 64 ~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~ 143 (183)
T 1dgu_A 64 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143 (183)
T ss_dssp HHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHH
Confidence 3566789999999 9999999999876543 33568999999999999999999999998876543 345556654
Q ss_pred ----HHHHhcCCCCCceehhhhHHHHHH
Q 011647 450 ----AFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 450 ----~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+|+.+|.|++|.|+.+|+..+...
T Consensus 144 ~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 171 (183)
T 1dgu_A 144 LIDNILEESDIDRDGTINLSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 999999999999999999887653
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-10 Score=102.32 Aligned_cols=100 Identities=13% Similarity=0.103 Sum_probs=81.2
Q ss_pred HhhcccCCCCCCc-ccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc-----cccHHH---
Q 011647 377 EMFKSMDTDNSGT-ITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-----VEREEH--- 446 (480)
Q Consensus 377 ~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-----~~~~~~--- 446 (480)
++|..+|.|++|. |+.+||..++..+... ...+.+..+|..+|.|++|.|+.+||..++..... ..+.++
T Consensus 95 ~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~ 174 (214)
T 2l4h_A 95 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 174 (214)
T ss_dssp HHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHH
T ss_pred HHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence 4688889999999 9999999999876543 33568999999999999999999999998765432 233333
Q ss_pred -HHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 447 -LYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 447 -~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+..+|+.+|.|+||.|+.+||..+......
T Consensus 175 ~~~~~~~~~D~d~dG~Is~~EF~~~~~~~p~ 205 (214)
T 2l4h_A 175 LIDNILEESDIDRDGTINLSEFQHVISRSPD 205 (214)
T ss_dssp HHHHHHHHHCCSCCSSBCSHHHHHHHHTCHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHhChH
Confidence 446999999999999999999888765433
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-10 Score=98.37 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=83.4
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCC-----CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-----LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~ 448 (480)
.|..+|..+| ++|.|+.+||..++...... .....+..+|..+|.|++|.|+.+||..++.... .+.+++.
T Consensus 56 ~~~~l~~~~D--~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~ 131 (174)
T 1q80_A 56 VWDNFLTAVA--GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAP 131 (174)
T ss_dssp HHHHTGGGTT--TTSCEEHHHHHHHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHH
T ss_pred HHHHHHHhcC--CCCeEcHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHH
Confidence 4568899999 99999999999988876442 1246788899999999999999999999886652 5667899
Q ss_pred HHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+|+.+|.|++|.|+.+|+..+...+.
T Consensus 132 ~~~~~~D~d~dg~i~~~ef~~~~~~~~ 158 (174)
T 1q80_A 132 ASFDAIDTNNDGLLSLEEFVIAGSDFF 158 (174)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCceEeHHHHHHHHHHHh
Confidence 999999999999999999999887765
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.03 E-value=9.4e-10 Score=92.19 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=76.2
Q ss_pred CCCCcccHHHHhhhhccc--CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCce
Q 011647 385 DNSGTITFEELKAGLPKL--GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQ 462 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~--~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i 462 (480)
+++|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.|++|.|
T Consensus 50 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i 129 (145)
T 2bl0_B 50 LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAI 129 (145)
T ss_dssp HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEE
T ss_pred cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcE
Confidence 789999999999988775 344456788999999999999999999999998777666788899999999999999999
Q ss_pred ehhhhHHHHH
Q 011647 463 WKSWNMRLRS 472 (480)
Q Consensus 463 ~~~e~~~~~~ 472 (480)
+.+|+..+..
T Consensus 130 ~~~eF~~~~~ 139 (145)
T 2bl0_B 130 NYESFVDMLV 139 (145)
T ss_dssp EHHHHHHHHH
T ss_pred eHHHHHHHHH
Confidence 9999987765
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.02 E-value=2e-10 Score=98.97 Aligned_cols=98 Identities=21% Similarity=0.225 Sum_probs=78.3
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~ 453 (480)
.+..+|..+|.+++|.|+..||..++...........+..+|..+|.|++|.|+.+||..++.... .+.+++..+|+.
T Consensus 64 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~~ 141 (166)
T 2aao_A 64 EILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRD 141 (166)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 366788899999999999999999887654434557889999999999999999999999987653 456789999999
Q ss_pred hcCCCCCceehhhhHHHHHH
Q 011647 454 FDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 454 ~D~d~~G~i~~~e~~~~~~~ 473 (480)
+|.|++|.|+.+|+..+...
T Consensus 142 ~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 142 VDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp HCTTCSSSBCHHHHHHHHC-
T ss_pred hCCCCCCcEeHHHHHHHHHh
Confidence 99999999999999887643
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.01 E-value=5.8e-10 Score=88.85 Aligned_cols=66 Identities=32% Similarity=0.456 Sum_probs=61.5
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
....++.+|+.||.|++|+|+.+||..++..+ |..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 40 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 34568899999999999999999999999999 8899999999999999999999999999998864
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=4.7e-10 Score=88.77 Aligned_cols=68 Identities=21% Similarity=0.342 Sum_probs=62.5
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
....++++|+.||.+++|.|+..||..++..+|..++..+++.++..+|.|++|.|+|+||+.++...
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence 34678899999999999999999999999999999999999999999999999999999999988643
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.01 E-value=2.3e-10 Score=88.16 Aligned_cols=68 Identities=26% Similarity=0.429 Sum_probs=60.3
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc---cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK---LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++..+.++|+.|| .|++| .|+.+||+.+++. ++. ++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 445678999999999 99999 9999999999987 334 78889999999999999999999999998753
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.01 E-value=2.7e-10 Score=96.87 Aligned_cols=66 Identities=23% Similarity=0.375 Sum_probs=61.0
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
...++++|+.||.|++|+|+.+||+.+|..+|.+++.++++.|+..+|.| +|.|+|+||+.++.+-
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 35688999999999999999999999999999999999999999999988 9999999999998653
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=99.00 E-value=2.7e-10 Score=87.95 Aligned_cols=69 Identities=23% Similarity=0.429 Sum_probs=63.5
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+++...++.+|..|| .|++| .|+.+||..++.. +|..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 455678999999999 79999 9999999999998 899999999999999999999999999999998754
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.00 E-value=3.7e-10 Score=93.91 Aligned_cols=68 Identities=22% Similarity=0.376 Sum_probs=63.1
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
....++.+|+.||.|++|.|+.+||..++..+| ..++.++++.+|..+|.|++|.|+|+||+.++...
T Consensus 38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 38 FVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 456788999999999999999999999999999 49999999999999999999999999999998654
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.6e-11 Score=88.95 Aligned_cols=67 Identities=30% Similarity=0.462 Sum_probs=60.5
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC--CCCCHHHHHH----HHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG--TRLSESEVRQ----LMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~--~~~~~~~~~~----~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+....+..+|..||.|++|.|+.+||..++..+| ..++..+++. +|..+|.|++|.|+|+||+..+.
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~ 76 (83)
T 1yx7_A 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA 76 (83)
T ss_dssp CSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence 3456789999999999999999999999999999 8888888888 99999999999999999997654
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.6e-10 Score=87.99 Aligned_cols=66 Identities=30% Similarity=0.466 Sum_probs=61.4
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
....++.+|+.||.|++|.|+.+||..++..+ |..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 45678899999999999999999999999999 7889999999999999999999999999998763
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-09 Score=91.49 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=82.7
Q ss_pred hHHHhhccc---CCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 374 GLKEMFKSM---DTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 374 ~~~~~F~~~---D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
.+..+|..+ |.++ |.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++
T Consensus 45 ~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~ 123 (149)
T 2mys_C 45 EINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEV 123 (149)
T ss_pred HHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHH
Confidence 355667777 9999 999999999988775 334456788999999999999999999999998877666788899
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..+|+. |.|++|.|+.+|+..+..
T Consensus 124 ~~~~~~-d~~~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 124 EELMKG-QEDSNGCINYEAFVKHIM 147 (149)
T ss_pred HHHHhh-CCCCCCcEeHHHHHHHHh
Confidence 999999 999999999999987764
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=98.99 E-value=3e-10 Score=96.09 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=82.2
Q ss_pred hhHHHhhcccCCC--CCCcccHHHHhhhhcccCCC---CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 373 MGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTR---LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 373 ~~~~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~---~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
..+..+|..+|.+ ++|.|+.+||..++...... .....+..+|..+|.|++|.|+.+||..++.......+.+++
T Consensus 46 ~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~ 125 (151)
T 1w7j_B 46 AEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV 125 (151)
T ss_dssp HHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHH
T ss_pred HHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHH
Confidence 3467789999999 99999999999998875422 234567789999999999999999999998877666788999
Q ss_pred HHHHHHhcCCCCCceehhhhHHHH
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
..+|+.+| |++|.|+.+|+..+.
T Consensus 126 ~~~~~~~d-~~dg~i~~~eF~~~~ 148 (151)
T 1w7j_B 126 ETVLAGHE-DSNGCINYEAFLKHI 148 (151)
T ss_dssp HHHHTTCC-CTTSEEEHHHHHHHT
T ss_pred HHHHHhcc-CCCCeEeHHHHHHHH
Confidence 99999999 999999999998764
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.9e-10 Score=99.17 Aligned_cols=97 Identities=11% Similarity=0.131 Sum_probs=80.3
Q ss_pred HhhcccCCCCCCcccHHHHhhhhcccCCC----------------CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-c
Q 011647 377 EMFKSMDTDNSGTITFEELKAGLPKLGTR----------------LSESEVRQLMEAADVDGNGTIDYIEFITATMHM-N 439 (480)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~~----------------~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~ 439 (480)
++|..+|.+++|.|+.+||..++...... .....+..+|..+|.|++|.|+.+||..++... .
T Consensus 65 ~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g 144 (208)
T 2ct9_A 65 RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVG 144 (208)
T ss_dssp HHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhC
Confidence 46888899999999999999988765321 146788899999999999999999999998764 5
Q ss_pred ccccHHHHHHH----HHHhcCCCCCceehhhhHHHHHH
Q 011647 440 RVEREEHLYKA----FEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 440 ~~~~~~~~~~~----F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
...+.+++..+ |+.+|.|+||.|+.+|+..+...
T Consensus 145 ~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 145 VNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp TTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 55666777666 99999999999999999776543
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=98.99 E-value=5.5e-10 Score=88.96 Aligned_cols=65 Identities=37% Similarity=0.514 Sum_probs=61.1
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
...++.+|+.||.|++|.|+.+||..++..+ |..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 40 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4568899999999999999999999999998 9999999999999999999999999999999864
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=98.99 E-value=5.7e-10 Score=91.90 Aligned_cols=64 Identities=27% Similarity=0.345 Sum_probs=59.1
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++...++++|+.|| |++|+|+.+|++.+|..++ ++..+++.|+...|.|+||.|+|+||+.++.
T Consensus 48 ~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~ 111 (139)
T 2jq6_A 48 KDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDDEEFALANH 111 (139)
T ss_dssp GTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45678999999999 9999999999999999976 6799999999999999999999999999864
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-10 Score=85.38 Aligned_cols=66 Identities=26% Similarity=0.463 Sum_probs=60.9
Q ss_pred HhhHHHhhccc-CCCCC-CcccHHHHhhhhcccCCCC--CHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 372 IMGLKEMFKSM-DTDNS-GTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 372 ~~~~~~~F~~~-D~~~~-g~i~~~e~~~~l~~~~~~~--~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
...++++|+.| |.+++ |.|+..||..++..+|..+ +..+++.++..+|.|++|.|+|+||+.++..
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 45688999999 99999 9999999999999999888 8899999999999999999999999998753
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=98.98 E-value=7.2e-10 Score=88.15 Aligned_cols=66 Identities=39% Similarity=0.549 Sum_probs=60.9
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
....++.+|+.||.|++|.|+.+||..++..+ |..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 34668899999999999999999999999998 6789999999999999999999999999998763
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=98.97 E-value=6.1e-10 Score=88.71 Aligned_cols=67 Identities=36% Similarity=0.487 Sum_probs=62.0
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.....++.+|+.+|.|++|.|+.+||..++..+ |..++.++++.++..+|.|++|.|+|+||+.++.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 345678899999999999999999999999998 7889999999999999999999999999998864
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1e-09 Score=87.48 Aligned_cols=67 Identities=39% Similarity=0.550 Sum_probs=61.9
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.....++.+|+.||.|++|.|+.+||..++..+ |..++.++++.++..+|.|++|.|+|+||+.++.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 345678899999999999999999999999998 7889999999999999999999999999998864
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=98.96 E-value=6.5e-10 Score=88.57 Aligned_cols=66 Identities=30% Similarity=0.446 Sum_probs=61.5
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
....++.+|+.||.|++|.|+.+||..++..+ |..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 45678899999999999999999999999998 8889999999999999999999999999998763
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=98.96 E-value=6.4e-11 Score=94.33 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=75.1
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cccccHHHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKA 450 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~~~~~~~~~~ 450 (480)
++.++|..+| ++|.|+.+||..++... .....++..+|..+|.|++|.|+.+||..++... ....+.+++..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2kyc_A 10 DIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTF 85 (108)
T ss_dssp HHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHH
T ss_pred HHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 3556677777 88999999998887532 2334668889999999999999999998887655 444566778899
Q ss_pred HHHhcCCCCCceehhhhHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
|+.+|.|++|.|+.+|+..+..
T Consensus 86 ~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 86 LAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp HTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHhCCCCCCcCCHHHHHHHHh
Confidence 9999999999999999887653
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4.3e-10 Score=86.19 Aligned_cols=69 Identities=25% Similarity=0.445 Sum_probs=62.6
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhcc---cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK---LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++....++.+|..|| .|++| .|+.+||..+++. +|..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 344578899999999 59999 9999999999997 898889999999999999999999999999998753
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-09 Score=91.13 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=73.3
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC---CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN 439 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 439 (480)
++...+++++.. ++. .|.+++|.|+..||..++.... .....+++..+|+.+|.|++|.|+.+||..++....
T Consensus 40 lG~~~t~~el~~---~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 115 (159)
T 3i5g_C 40 LGMNPTEAQVHQ---HGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115 (159)
T ss_dssp TTCCCCHHHHHT---TTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSS
T ss_pred cCCCCCHHHHHH---HHc-ccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhC
Confidence 334445554433 332 4667788888888877776542 233466777788888888888888888888877766
Q ss_pred ccccHHHHHHHHHHhcC--CCCCceehhhhHHHH
Q 011647 440 RVEREEHLYKAFEYFDK--DNSTSQWKSWNMRLR 471 (480)
Q Consensus 440 ~~~~~~~~~~~F~~~D~--d~~G~i~~~e~~~~~ 471 (480)
...+.+++..+++.+|. |++|.|+.+||.+++
T Consensus 116 ~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m 149 (159)
T 3i5g_C 116 ERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKV 149 (159)
T ss_dssp SCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHH
Confidence 66777888888888874 777888888776654
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.3e-10 Score=88.46 Aligned_cols=69 Identities=12% Similarity=0.302 Sum_probs=61.1
Q ss_pred HHHHhhHHHhhcccCC-CCCC-cccHHHHhhhh-cccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMDT-DNSG-TITFEELKAGL-PKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~-~~~g-~i~~~e~~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++....+.++|..||. |++| .|+.+||..++ +.+|..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3456789999999999 9999 99999999999 77886666678899999999999999999999998754
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=90.70 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=72.7
Q ss_pred CCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceeh
Q 011647 386 NSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWK 464 (480)
Q Consensus 386 ~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~ 464 (480)
++|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.|++|.|+.
T Consensus 52 ~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~ 131 (143)
T 3j04_B 52 APGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNY 131 (143)
T ss_dssp SSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCS
T ss_pred CCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcH
Confidence 78899999998888754 44556788888999999999999999999998877776778888899999999999999999
Q ss_pred hhhHHHHH
Q 011647 465 SWNMRLRS 472 (480)
Q Consensus 465 ~e~~~~~~ 472 (480)
+|+..+..
T Consensus 132 ~eF~~~~~ 139 (143)
T 3j04_B 132 VEFTRILK 139 (143)
T ss_dssp THHHHHHH
T ss_pred HHHHHHHh
Confidence 98877654
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.4e-09 Score=105.88 Aligned_cols=100 Identities=23% Similarity=0.300 Sum_probs=85.9
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
..+..+|..+|.|++|.|+.+||..++... ......+.+..+|..+|.|++|.|+.+||..++.......+.+++..+|
T Consensus 348 eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf 427 (450)
T 3sg6_A 348 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 427 (450)
T ss_dssp HHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 346678999999999999999999988764 3445678899999999999999999999999988777778889999999
Q ss_pred HHhcCCCCCceehhhhHHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+.+|.|+||.|+.+||..++.
T Consensus 428 ~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 428 READIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHCTTSSSSEEHHHHHHHHC
T ss_pred HHhCCCCCCcEeHHHHHHHHh
Confidence 999999999999999987753
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-09 Score=97.09 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=80.5
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-------------ccc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-------------NRV 441 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-------------~~~ 441 (480)
+.-+|+.||.|++|.|+..||+.+|..+-....++.++++|+.+| |++|.|+.+|+..++..+ ...
T Consensus 134 a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~ 212 (261)
T 1eg3_A 134 LNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGS 212 (261)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCS
T ss_pred HHHHHHHccCCCCceEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 456899999999999999999999999876667889999999999 999999999998876331 123
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..++.+.++|+.+| +||.||.+||.+-..
T Consensus 213 ~~e~~v~~~F~~~d--~dg~It~~EFl~~~~ 241 (261)
T 1eg3_A 213 NIEPSVRSCFQFAN--NKPEIEAALFLDWMR 241 (261)
T ss_dssp CCHHHHHHHHHHTT--TCSCBCHHHHHHHHH
T ss_pred CHHHHHHHHHHhCC--CCCcCCHHHHHHHHH
Confidence 45788999999996 899999999976543
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
Probab=98.92 E-value=4.4e-10 Score=87.27 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=59.7
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++..++++|+.||. ++|+|+.+||+.+|+. +|..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 77 (96)
T 1a4p_A 5 EHAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (96)
T ss_dssp HHHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4556789999999994 5679999999999986 566778899999999999999999999999998754
|
| >1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.6e-10 Score=89.29 Aligned_cols=68 Identities=21% Similarity=0.368 Sum_probs=59.8
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcc-----cCC--CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGT--RLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-----~~~--~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++..++++|+.||.+ +|.|+.+||+.+++. +|. .+++.+++.++..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (100)
T 1psr_A 6 ERSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45678899999999976 799999999999987 455 677889999999999999999999999998754
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.1e-09 Score=93.92 Aligned_cols=98 Identities=17% Similarity=0.080 Sum_probs=74.1
Q ss_pred HHhhcccC---CCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc-ccccc-c------cH
Q 011647 376 KEMFKSMD---TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM-HMNRV-E------RE 444 (480)
Q Consensus 376 ~~~F~~~D---~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~-~~~~~-~------~~ 444 (480)
.++|..+| .+++|.|+..||..++..+.......++..+|..+|.|++|.|+.+||..++. ..... . +.
T Consensus 62 ~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~ 141 (179)
T 3a8r_A 62 VQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERAD 141 (179)
T ss_dssp HHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchH
Confidence 34444444 56788899999988776654434567888899999999999999999998876 43321 2 66
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+++..+|+.+|.|+||.|+.+|+..++..
T Consensus 142 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 142 EYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp HHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 78889999999999999999998877654
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-10 Score=85.32 Aligned_cols=67 Identities=21% Similarity=0.371 Sum_probs=59.9
Q ss_pred HHhhHHHhhcccCC-CCCC-cccHHHHhhhhcc-cCCCC-CHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 371 EIMGLKEMFKSMDT-DNSG-TITFEELKAGLPK-LGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 371 ~~~~~~~~F~~~D~-~~~g-~i~~~e~~~~l~~-~~~~~-~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+...++.+|..||. |++| .|+.+||..+++. +|... +..+++.++..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 45678999999999 9999 9999999999986 88766 7888999999999999999999999988753
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=98.90 E-value=8e-09 Score=88.80 Aligned_cols=87 Identities=15% Similarity=0.051 Sum_probs=62.2
Q ss_pred CCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehh
Q 011647 387 SGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKS 465 (480)
Q Consensus 387 ~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~ 465 (480)
+|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.|++|.|+.+
T Consensus 72 dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~ 151 (166)
T 2mys_B 72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYK 151 (166)
T ss_pred CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHH
Confidence 6777777777776653 333455677777777777777888888777777665555667777777777777778888877
Q ss_pred hhHHHHHH
Q 011647 466 WNMRLRSI 473 (480)
Q Consensus 466 e~~~~~~~ 473 (480)
||..++..
T Consensus 152 eF~~~~~~ 159 (166)
T 2mys_B 152 NICYVITH 159 (166)
T ss_pred HHHHHHHh
Confidence 77766554
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-10 Score=104.49 Aligned_cols=100 Identities=14% Similarity=0.049 Sum_probs=72.7
Q ss_pred HHHhhccc-----CCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc-cccHHHHH
Q 011647 375 LKEMFKSM-----DTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-VEREEHLY 448 (480)
Q Consensus 375 ~~~~F~~~-----D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-~~~~~~~~ 448 (480)
+..+|..+ |.|++|.|+.+||..++..+........+..+|..+|.|++|.|+.+||..++..+.. ..+..++.
T Consensus 94 ~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~ 173 (226)
T 2lvv_A 94 VQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDAT 173 (226)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCH
T ss_pred HHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHH
Confidence 34455555 8899999999999885433322223467888899999999999999999988764311 12223488
Q ss_pred HHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.+|+.+|.|++|.|+.+||..++..-
T Consensus 174 ~~~~~~D~d~dG~Is~~EF~~~~~~~ 199 (226)
T 2lvv_A 174 TVFNEIDTNGSGVVTFDEFSCWAVTK 199 (226)
T ss_dssp HHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 89999999999999999988877654
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=98.89 E-value=4.9e-09 Score=87.28 Aligned_cols=87 Identities=10% Similarity=-0.008 Sum_probs=75.9
Q ss_pred CCCCcccHHHHhhhhcccCCC---CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCc
Q 011647 385 DNSGTITFEELKAGLPKLGTR---LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTS 461 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~---~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 461 (480)
+++|.|+.+||..++...... .....+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|. ++|.
T Consensus 49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~ 127 (140)
T 1ggw_A 49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGM 127 (140)
T ss_dssp TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCC
T ss_pred CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCc
Confidence 889999999999998876432 235889999999999999999999999998776666788899999999999 9999
Q ss_pred eehhhhHHHHH
Q 011647 462 QWKSWNMRLRS 472 (480)
Q Consensus 462 i~~~e~~~~~~ 472 (480)
|+.+|+..+..
T Consensus 128 i~~~eF~~~~~ 138 (140)
T 1ggw_A 128 VNYHDFVQMIL 138 (140)
T ss_dssp STTTHHHHHHH
T ss_pred EeHHHHHHHHh
Confidence 99999987753
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-08 Score=86.64 Aligned_cols=87 Identities=9% Similarity=0.028 Sum_probs=69.0
Q ss_pred CCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCcee
Q 011647 385 DNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQW 463 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~ 463 (480)
+++|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.| +|.|+
T Consensus 62 ~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~ 140 (156)
T 1wdc_B 62 EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFD 140 (156)
T ss_dssp TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEEC
T ss_pred hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEe
Confidence 467888888888877653 4444677888888888888888888888888877666566778888888888888 88888
Q ss_pred hhhhHHHHH
Q 011647 464 KSWNMRLRS 472 (480)
Q Consensus 464 ~~e~~~~~~ 472 (480)
.+|+..+..
T Consensus 141 ~~eF~~~~~ 149 (156)
T 1wdc_B 141 YVKFTAMIK 149 (156)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888877654
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=98.84 E-value=6.3e-09 Score=94.82 Aligned_cols=104 Identities=12% Similarity=0.112 Sum_probs=82.4
Q ss_pred hHHHhhcccCC-CCCCcccHHHHhhhhcccCCC--------C-----CHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc
Q 011647 374 GLKEMFKSMDT-DNSGTITFEELKAGLPKLGTR--------L-----SESEVRQLMEAADVDGNGTIDYIEFITATMHMN 439 (480)
Q Consensus 374 ~~~~~F~~~D~-~~~g~i~~~e~~~~l~~~~~~--------~-----~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 439 (480)
.+.++|+...- .++..|+..++..+|..+... . ...-+..+|+.||.|++|+|+|.||+..+.-..
T Consensus 83 ~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~ 162 (261)
T 1eg3_A 83 AACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLC 162 (261)
T ss_dssp HHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHHHc
Confidence 34455655433 356678999998888764211 1 134466699999999999999999999988777
Q ss_pred ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHHh
Q 011647 440 RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQ 478 (480)
Q Consensus 440 ~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~~ 478 (480)
.+..++.++.+|++|| |+||+|+.+|+..+..++.+|.
T Consensus 163 rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~ 200 (261)
T 1eg3_A 163 KAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIP 200 (261)
T ss_dssp SSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHH
Confidence 7888999999999999 9999999999999998877654
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.6e-09 Score=83.45 Aligned_cols=69 Identities=22% Similarity=0.362 Sum_probs=60.8
Q ss_pred HHHHhhHHHhhcccC-CCCCC-cccHHHHhhhhc-ccC----CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLP-KLG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D-~~~~g-~i~~~e~~~~l~-~~~----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++....+..+|..|| .+++| .|+.+||..++. .++ ..++..+++.++..+|.|++|.|+|+||+.++..
T Consensus 9 ~~~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~ 84 (99)
T 1qls_A 9 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 84 (99)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 344567899999998 99999 999999999998 453 6778899999999999999999999999998754
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A | Back alignment and structure |
|---|
Probab=98.84 E-value=5.4e-09 Score=83.31 Aligned_cols=67 Identities=27% Similarity=0.368 Sum_probs=61.9
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++..++.++|+.+|. ++|+|+.+|++.++...+ ++.+++..|+...|.|++|.|+|+||+.++.
T Consensus 27 it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~ 93 (121)
T 3fia_A 27 ITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVEFSIAMK 93 (121)
T ss_dssp CCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--CCHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence 678889999999999999 899999999999999875 4689999999999999999999999999864
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=98.83 E-value=2.7e-09 Score=81.10 Aligned_cols=84 Identities=18% Similarity=0.177 Sum_probs=68.3
Q ss_pred CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceeh
Q 011647 385 DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWK 464 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~ 464 (480)
|++|.|+.+|. .+...+... ...++..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.|++|.|+.
T Consensus 1 ~~~G~i~~~e~-~~~~~l~~~-~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~ 78 (87)
T 1s6j_A 1 HSSGHIDDDDK-HMAERLSEE-EIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHH-HSSSSSCSS-STTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCccHH-HHHHHCCHH-HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 57899999992 222233222 2345788999999999999999999999988777778899999999999999999999
Q ss_pred hhhHHH
Q 011647 465 SWNMRL 470 (480)
Q Consensus 465 ~e~~~~ 470 (480)
+|+..+
T Consensus 79 ~eF~~~ 84 (87)
T 1s6j_A 79 GEFIAA 84 (87)
T ss_dssp HHHTTC
T ss_pred HHHHHH
Confidence 988653
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=98.81 E-value=3e-09 Score=113.14 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=76.5
Q ss_pred HHhhHHHhhc--ccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcC-------CCCcceeHHHHHHHHcccccc
Q 011647 371 EIMGLKEMFK--SMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV-------DGNGTIDYIEFITATMHMNRV 441 (480)
Q Consensus 371 ~~~~~~~~F~--~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~I~~~eF~~~~~~~~~~ 441 (480)
....++++|. .||.|++|.|+.+|+..+|+. ...+++.++..+|. +++|.|+|+||+.++....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~-- 216 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC-- 216 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc--
Confidence 4566889999 899999999999999999976 36899999999985 8899999999999986543
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
..+++..+|+.||+|++|+||.+|+++++.++
T Consensus 217 -~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~ 248 (799)
T 2zkm_X 217 -PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQK 248 (799)
T ss_dssp -CCHHHHTTCC--------CCCHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHh
Confidence 34789999999999999999999999988876
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=8.5e-08 Score=91.32 Aligned_cols=137 Identities=20% Similarity=0.281 Sum_probs=95.3
Q ss_pred ceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCC--CeeEEEEEEE-eCCeEEEEEec
Q 011647 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR--NIVELKGAYE-DRHSVNLIMDL 149 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp--~iv~~~~~~~-~~~~~~lv~e~ 149 (480)
+.++.|....||+. +..+++|+... ......+.+|..+|+.+..+- .+++++.+.. ..+..++|||+
T Consensus 25 ~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 25 ESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 56788999999988 46789998521 233567899999999997442 3567777764 45667899999
Q ss_pred CCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc------------------------------------------
Q 011647 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM------------------------------------------ 187 (480)
Q Consensus 150 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~------------------------------------------ 187 (480)
++|..|.+... ..++......++.++...|..||+.
T Consensus 95 i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 95 VQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred cCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 99988865322 2244555555555555555555532
Q ss_pred ------------------CCeecCCCCcceecccCCCCCC-eeEeecccceec
Q 011647 188 ------------------GVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFF 221 (480)
Q Consensus 188 ------------------~ivH~Dlkp~Nil~~~~~~~~~-ikl~Dfg~a~~~ 221 (480)
.++|+|++|.||+++.++.++. +.|+||+.+...
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 3599999999999964222344 489999988753
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=98.81 E-value=7.6e-09 Score=91.79 Aligned_cols=84 Identities=10% Similarity=-0.052 Sum_probs=50.0
Q ss_pred CCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehh
Q 011647 387 SGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKS 465 (480)
Q Consensus 387 ~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~ 465 (480)
+|.|+.+||..++... ........+..+|..+|.|++|.|+.+||..++ ......+.+++..+|+.+|.|++|.|+.+
T Consensus 103 ~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~ 181 (196)
T 3dtp_E 103 PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIK 181 (196)
T ss_dssp SSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHH
T ss_pred cCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHH
Confidence 5666666666665542 233345556666666666666666666666666 55445555666666666666666666666
Q ss_pred hhHHHH
Q 011647 466 WNMRLR 471 (480)
Q Consensus 466 e~~~~~ 471 (480)
||..++
T Consensus 182 EF~~~l 187 (196)
T 3dtp_E 182 KFAQIL 187 (196)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=98.79 E-value=8.1e-09 Score=112.88 Aligned_cols=85 Identities=21% Similarity=0.378 Sum_probs=79.7
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.||.|++|.|+.+||..++..+|..++..+++.++..+| |++|.|+|+||+.++... +.+..+|+
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~~~F~ 679 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFK 679 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence 67899999999999999999999999999999999999999999999 999999999999987643 57899999
Q ss_pred HhcCCCCCceeh
Q 011647 453 YFDKDNSTSQWK 464 (480)
Q Consensus 453 ~~D~d~~G~i~~ 464 (480)
.+|+|++|.|+.
T Consensus 680 ~~D~d~~G~It~ 691 (900)
T 1qxp_A 680 QLDPENTGTIQL 691 (900)
T ss_dssp HSCSSCCSCEEE
T ss_pred hhCCCCCceEEe
Confidence 999999999976
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=4.9e-08 Score=91.17 Aligned_cols=134 Identities=19% Similarity=0.239 Sum_probs=97.1
Q ss_pred eecccCCe-EEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecCCC
Q 011647 74 ELGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 74 ~lG~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 152 (480)
.+..|..| .||+......+..+++|+-... ....+.+|...|+.+..+--+.+++.++.+.+..++|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 44445554 6999888777888999986432 2466889999999987665578899999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---------------------------------------------
Q 011647 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------------------------------------------- 187 (480)
Q Consensus 153 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------------------------------------------- 187 (480)
.++.+..... ......+..++...|..||+.
T Consensus 105 ~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 105 KTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp EEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 8876654321 122234455555555555531
Q ss_pred -------------CCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 188 -------------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 188 -------------~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.++|+|+.+.|||++ +++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~---~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFD---EGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEE---CCeEEEEEECccccc
Confidence 278999999999994 344567999998864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 480 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-96 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-88 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-88 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 9e-87 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-86 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-84 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-83 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-82 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-82 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-81 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-80 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 5e-80 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-80 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 7e-77 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-76 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-73 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-72 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-72 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 7e-72 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-71 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-70 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-68 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-67 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-66 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 6e-66 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-65 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 3e-64 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 6e-64 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 7e-64 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-63 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 7e-63 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-62 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-61 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-61 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 4e-60 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-60 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-60 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-59 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-59 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-59 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-58 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-58 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-57 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-57 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-56 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-56 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-55 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-55 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 5e-55 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-54 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-54 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-53 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-53 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-53 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-52 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 5e-51 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-48 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 6e-48 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-47 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-44 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-42 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-41 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 7e-24 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 8e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-21 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 3e-18 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 4e-18 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 1e-17 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 2e-17 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-06 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-05 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 2e-17 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 2e-10 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 8e-17 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 2e-05 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 9e-17 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-16 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 5e-10 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 0.002 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 5e-16 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 6e-04 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 5e-16 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 0.002 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 6e-16 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-05 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 7e-16 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 8e-16 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 1e-06 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 9e-05 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-15 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-10 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 6e-15 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 5e-05 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 7e-15 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-11 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-05 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 1e-14 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 3e-09 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 0.002 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-14 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 5e-07 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 5e-14 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 2e-04 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 6e-14 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 0.002 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 7e-14 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 4e-08 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 8e-14 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 4e-11 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-13 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 3e-08 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-07 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-13 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-04 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 2e-13 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-05 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 5e-13 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 6e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 7e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-07 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-12 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 2e-12 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 2e-04 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 1e-12 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 7e-07 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 1e-12 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 3e-04 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 2e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 9e-08 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 2e-12 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 5e-05 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 2e-12 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 6e-07 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 3e-05 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 5e-12 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 6e-12 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 7e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 6e-05 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 1e-11 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 2e-09 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 1e-11 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 1e-11 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 2e-08 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 2e-11 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 1e-04 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 2e-11 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 2e-11 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 4e-11 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 7e-11 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 1e-10 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-10 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-10 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-10 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 0.004 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 4e-10 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 1e-08 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 7e-10 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 6e-06 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 8e-10 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 2e-09 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 9e-10 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 2e-06 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 1e-09 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 2e-09 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-09 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-09 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 3e-09 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 2e-08 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 2e-08 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 2e-05 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 4e-08 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 3e-07 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 4e-07 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 4e-07 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 3e-04 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 6e-07 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-04 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 1e-06 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 1e-04 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-06 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-06 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 0.003 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-06 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 2e-06 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 8e-06 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 6e-06 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 0.001 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 4e-05 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 3e-04 | |
| d2pula1 | 392 | d.144.1.6 (A:5-396) Methylthioribose kinase MtnK { | 4e-05 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 5e-05 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 7e-05 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 9e-05 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 1e-04 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 291 bits (745), Expect = 2e-96
Identities = 123/299 (41%), Positives = 172/299 (57%), Gaps = 5/299 (1%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED+R+ Y F LG G F L K T++ A K I+ + L + E+
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIA 59
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++H + H NIV L YE + LIM L +GGELFDRI+ KG Y+ER A+ L Q++
Sbjct: 60 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 118
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H +G++HRDLKPEN L+ S EDS + +DFGLS PG V G+ YVAP
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 178
Query: 240 EVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL + Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 238
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD ++ ++ DP++R + + L HPW+ D A DK + +V ++K+ A +K K+
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 296
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 272 bits (697), Expect = 1e-88
Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 28/331 (8%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
V + Y ELG G FGV + K T + F K I++ +++ V+ E+ IM+
Sbjct: 26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK---YTVKNEISIMNQ 82
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVH 182
L H ++ L A+ED++ + LI++ +GGELFDRI A+ + SE N RQ +
Sbjct: 83 LH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 141
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
+ H ++H D+KPEN + + + S +K DFGL+ P ++ K +A + APE++
Sbjct: 142 HMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV 200
Query: 243 RRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R G D+W+ GV+ Y+LLSG+ PF GE + + R +F D + ++S AK
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD---------------------ASDKPLDI 340
D +K +L +P++RL+ + L HPW++ D +D P
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQ 320
Query: 341 AVLTRMKQFRAMNKLKKVALKVIAENLSEEE 371
+ R+ F ++ K + ++ +E
Sbjct: 321 PAIGRIANFSSLRKHRPQEYQIYDSYFDRKE 351
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 271 bits (694), Expect = 2e-88
Identities = 86/305 (28%), Positives = 156/305 (51%), Gaps = 12/305 (3%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+++ Y+ +LGRG+FG+ + +K+ + K + + D V++E+ I++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILN 56
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVV 181
HRNI+ L ++E + +I + +G ++F+RI +ER + Q+ +
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ HS + H D++PEN ++ + S +K +FG + KPGD F+ L + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ + D+WS G ++Y+LLSG+ PF ET Q I + I+ F + + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
D V ++L + K R++A+E L HPW++ + + V+ +K R + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 361 KVIAE 365
++
Sbjct: 291 NMVVS 295
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 265 bits (678), Expect = 9e-87
Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 16/273 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN------RDDVEDVRREVQIMH 122
Y LGRG V HK T +++A K I + ++ E +EV I+
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
++GH NI++LK YE L+ DL GELFD + K SE+ + R ++ V+
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 124
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
H + ++HRDLKPEN L +D +K TDFG S PG+ +++ G+ Y+APE++
Sbjct: 125 ALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 181
Query: 243 -------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
YG E D+WS GVI+Y LL+G PPFW + + I+ G+ F S W +
Sbjct: 182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 241
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
S + KD+V + L P++R +A E L HP+ +
Sbjct: 242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 267 bits (683), Expect = 2e-86
Identities = 100/297 (33%), Positives = 150/297 (50%), Gaps = 9/297 (3%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ V + Y ELG G FGV + VT + T FA K + + + D E VR+E+Q M
Sbjct: 22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMS 78
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVV 181
L H +V L A+ED + + +I + +GGELF+++ + SE A RQ+ +
Sbjct: 79 VLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ H +H DLKPEN +F++ + LK DFGL+ P K G+A + APEV
Sbjct: 138 CHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 196
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ G D+WS GV+ YILLSG+ PF GE + + + + IS
Sbjct: 197 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 256
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
KD ++K+L ADP R++ + L HPW+ G+A + I +R + R K K
Sbjct: 257 KDFIRKLLLADPNTRMTIHQALEHPWLT-PGNAPGRDSQIPS-SRYTKIRDSIKTKY 311
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 259 bits (663), Expect = 1e-84
Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 16/274 (5%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ED + GR LG+G+FG YL K +K A K + +L +RREV+I
Sbjct: 5 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 60
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
HL H NI+ L G + D V LI++ G ++ + + E+ A ++ +
Sbjct: 61 SHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 119
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
YCHS V+HRD+KPEN L S LK DFG SV P L G+ Y+ PE+
Sbjct: 120 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEM 175
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ R + + D+WS GV+ Y L G PPF T Q + I R F ++ A
Sbjct: 176 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGA 231
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
+D++ ++L +P +R EVL HPW+ ++S
Sbjct: 232 RDLISRLLKHNPSQRPMLREVLEHPWIT--ANSS 263
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 259 bits (663), Expect = 1e-83
Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 19/315 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G G + +K T+++FA K + D RREV++ +
Sbjct: 14 KVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCP 65
Query: 129 NIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVH 182
+IV + YE+ ++ ++M+ GGELF RI +G ++ER A+ + + + +
Sbjct: 66 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y HS+ + HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL
Sbjct: 126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 185
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNIS 297
Y D+WS GVI+YILL G PPF+ +I I G +F + W +S
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
K +++ +L +P +R++ E +NHPW+ PL + + + + R + ++
Sbjct: 246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEE 305
Query: 358 VALKVIAENLSEEEI 372
+ + + E+I
Sbjct: 306 MTSALATMRVDYEQI 320
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 255 bits (652), Expect = 1e-82
Identities = 104/271 (38%), Positives = 155/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQ 119
E+V + Y G ELG GQF V K T Q+A K I R+ + ED+ REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q++
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 239 PEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q + + +F + + N S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 255 bits (653), Expect = 2e-82
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 18/312 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+D + RE+G G FG Y + A K +S + + +D+ +EV+ +
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H N ++ +G Y H+ L+M+ C G + K E A + + +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y HS ++HRD+K N L S E +K DFG + P + F VG+ Y++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVI 183
Query: 243 R----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
Y + D+WS G+ L PP + S I + + + + S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSE 241
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
++ V L P++R ++ +L H ++ ++P + + + A+ +L +
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVL-----RERPPTVIMDLIQRTKDAVRELDNL 296
Query: 359 ALKVIAENLSEE 370
+ + + L +E
Sbjct: 297 QYRKMKKILFQE 308
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 251 bits (643), Expect = 3e-81
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 16/283 (5%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+ + + ELG G FG Y +K+T A K I ++ + +++ED E+ I+
Sbjct: 9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 65
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVH 182
H NIV+L A+ +++ ++++ CAGG + ++ + +E +C+Q + ++
Sbjct: 66 CD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEV 241
Y H ++HRDLK N LF+ D +K DFG+S + +G+ Y++APEV
Sbjct: 125 YLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 181
Query: 242 L------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
+ R Y +AD+WS G+ L + PP + I + + P
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SR 240
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
SS+ KD +KK L + R + +++L HP++ VD + + L
Sbjct: 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 283
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 250 bits (639), Expect = 1e-80
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 12/279 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + Y ++G+G G Y T Q+ A + + L + E + E+ +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMR 72
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + +
Sbjct: 73 EN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEV 241
+ HS V+HRD+K +N L D +K TDFG +VG+ Y++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ R YG + DIWS G++ ++ G PP+ E I +P +S+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIF 246
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPL 338
+D + + L D ++R SA E+L H ++++ S PL
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 248 bits (634), Expect = 5e-80
Identities = 83/270 (30%), Positives = 129/270 (47%), Gaps = 18/270 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-R 244
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L +
Sbjct: 129 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF A+D+V
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLV 241
Query: 305 KKMLHADPKERLSAAE------VLNHPWMR 328
+K+L D +RL E + HP+
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 247 bits (632), Expect = 6e-80
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G +G L ++ T++ A K + ++ + D E++++E+ I L H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
N+V+ G + + L ++ C+GGELFDRI E A Q++ V Y H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRRN 245
+ HRD+KPEN L LK +DFGL+ F+ + + + G+ YVAPE+L+R
Sbjct: 124 ITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 246 --YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ D+WS G++L +L+G P+ ++ + + + +PW I S+ +
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLAL 239
Query: 304 VKKMLHADPKERLSAAEVLNHPWMR 328
+ K+L +P R++ ++ W
Sbjct: 240 LHKILVENPSARITIPDIKKDRWYN 264
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 241 bits (616), Expect = 7e-77
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ED +I + LG+G FG +L K T Q FA K++ ++ DDVE E +++
Sbjct: 1 IED----FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 56
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
H + + ++ + ++ +M+ GG+L I + + A +++ +
Sbjct: 57 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPE 240
+ HS G+++RDLK +N L +D +K DFG+ GD G+ Y+APE
Sbjct: 117 QFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPE 173
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+L + Y D WS GV+LY +L G PF G+ E+ +F +I + + +
Sbjct: 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY----PRWLEKE 229
Query: 300 AKDIVKKMLHADPKERLSAA-EVLNHPWMR 328
AKD++ K+ +P++RL ++ HP R
Sbjct: 230 AKDLLVKLFVREPEKRLGVRGDIRQHPLFR 259
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 239 bits (610), Expect = 1e-76
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F E+GRG F Y +T + A + RKL + + + + E +++ L H
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HP 68
Query: 129 NIVELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
NIV ++E + + L+ +L G L + + + CRQ++ + +
Sbjct: 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128
Query: 185 HSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
H+ ++HRDLK +N + +K D GL+ K K ++G+ ++APE+
Sbjct: 129 HTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMY 185
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDPWPNISSSAK 301
Y D+++ G+ + + + P+ I+ + G + K
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVK 243
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
+I++ + + ER S ++LNH + +
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 230 bits (588), Expect = 3e-73
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 7/269 (2%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y G LG G +L + A K + + + RRE Q L
Sbjct: 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-N 65
Query: 127 HRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
H IV + E ++M+ G L D + +G + + A + ++
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG-LSVFFKPGDVFKDLVGSAYYVAPEV 241
+ H G++HRD+KP N + S++ + ++ ++G+A Y++PE
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
R + A +D++S G +LY +L+G PPF G++ S+ +R S +S+
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 245
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+V K L +P+ R A + +RV
Sbjct: 246 DAVVLKALAKNPENRYQTAAEMRADLVRV 274
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 230 bits (588), Expect = 1e-72
Identities = 71/309 (22%), Positives = 118/309 (38%), Gaps = 49/309 (15%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME + + ELG G GV + V+HK + A K I I + RE+Q++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVL 58
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
H IV GA+ +++ M+ GG L + G E+ + ++ +
Sbjct: 59 HECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 182 HYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
Y +MHRD+KP N L +S +K DFG+S + VG+ Y++PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPE 173
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSSD----- 291
L+ +Y ++DIWS G+ L + G P + +F + G +
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 292 --------------------------------PWPNISSSAKDIVKKMLHADPKERLSAA 319
P S +D V K L +P ER
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 293
Query: 320 EVLNHPWMR 328
+++ H +++
Sbjct: 294 QLMVHAFIK 302
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (578), Expect = 7e-72
Identities = 70/271 (25%), Positives = 114/271 (42%), Gaps = 21/271 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +G G +G + K + K + + + + + EV ++ L H
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELK-HP 63
Query: 129 NIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVH 182
NIV DR + + ++M+ C GG+L I + + E + Q+ +
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 183 YCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGSAYY 236
CH V+HRDLKP N +K DFGL+ F K VG+ YY
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 180
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
++PE + R Y ++DIWS G +LY L + +PPF +++ + I G
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYR 237
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S +I+ +ML+ R S E+L +P
Sbjct: 238 YSDELNEIITRMLNLKDYHRPSVEEILENPL 268
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 228 bits (582), Expect = 7e-72
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 16/266 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ R LG G FG +L+ + + +A K + ++ VE E ++ +T H
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 64
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+ + G ++D + +IMD GGELF + + A ++ + Y HS
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 124
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYG 247
+++RDLKPEN L ++ +K TDFG + + DV L G+ Y+APEV+ + Y
Sbjct: 125 IIYRDLKPENILLD---KNGHIKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTKPYN 179
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D WS G+++Y +L+G PF+ ++ IL + F P + KD++ ++
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSRL 235
Query: 308 LHADPKERL-----SAAEVLNHPWMR 328
+ D +RL +V NHPW +
Sbjct: 236 ITRDLSQRLGNLQNGTEDVKNHPWFK 261
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 224 bits (571), Expect = 7e-71
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 20/267 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED---VRREVQIMHHL- 124
Y G LG G FG Y A K + ++ + ++ + V EV ++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGG-ELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+G ++ L +E S LI++ +LFD I +G E A + Q++ V +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CH+ GV+HRD+K EN L LK DFG K V+ D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R +G A +WS G++LY ++ G PF + E I+RG + F +SS +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFF----RQRVSSECQ 232
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
+++ L P +R + E+ NHPWM+
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQ 259
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 226 bits (576), Expect = 2e-70
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 14/271 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT- 125
N + R +GRG FG Y DT + +A K + +++ + E ++ ++
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 126 -GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL++
Sbjct: 124 HNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQK 179
Query: 245 N--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y + AD +S G +L+ LL G PF + I R + + + + S +
Sbjct: 180 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRS 238
Query: 303 IVKKMLHADPKERLS-----AAEVLNHPWMR 328
+++ +L D RL A EV P+ R
Sbjct: 239 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 269
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 220 bits (562), Expect = 1e-68
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 15/269 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR- 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNHPWMR 328
+L DPK+RL A EV+ H +
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 217 bits (553), Expect = 3e-67
Identities = 88/355 (24%), Positives = 138/355 (38%), Gaps = 51/355 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K I ++ + RE++I+
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLR 62
Query: 124 LTGHRNIVELKGAYEDRHSVNL----IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
H NI+ + + ++ G +L+ ++ H S Q++
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK-LLKTQHLSNDHICYFLYQILR 120
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG----DVFKDLVGSAY 235
+ Y HS V+HRDLKP N L + LK DFGL+ P + V + +
Sbjct: 121 GLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 177
Query: 236 YVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y APE++ + Y DIWS G IL +LS P F G+ + IL S +
Sbjct: 178 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237
Query: 294 ---------------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
PN S A D++ KML +P +R+ + L HP+
Sbjct: 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 297
Query: 327 MRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKS 381
+ D SD+P+ A K ++ L K LK L EE + ++S
Sbjct: 298 LEQYYDPSDEPIAEAPF---KFDMELDDLPKEKLK----ELIFEETARFQPGYRS 345
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 213 bits (543), Expect = 1e-66
Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 19/269 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
G+ +G G FG Y A K ++ ++ + EV ++
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR 62
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYC 184
H NI+ G Y + ++ C G L+ + I + + ++ RQ + Y
Sbjct: 63 -HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEV 241
H+ ++HRDLK N ED +K DFGL+ F+ L GS ++APEV
Sbjct: 121 HAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 242 LRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS--SDPWPN 295
+R Y ++D+++ G++LY L++G P+ + ++ S N
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ K ++ + L ER ++L
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 212 bits (540), Expect = 6e-66
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 33/292 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD--VEDVRREVQIMHHLTGHRNIVE 132
LG GQF Y K+T Q A K I D RE++++ L+ H NI+
Sbjct: 6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIG 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L A+ + +++L+ D + + + Y H ++HR
Sbjct: 65 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 124
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR--RNYGAE 249
DLKP N L E+ LK DFGL+ F P + V + +Y APE+L R YG
Sbjct: 125 DLKPNNLLLD---ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVG 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP--------------- 294
D+W+ G IL LL VP G+++ I + + WP
Sbjct: 182 VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 241
Query: 295 ---------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
D+++ + +P R++A + L + +
Sbjct: 242 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 293
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (536), Expect = 5e-65
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 17/274 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHL 124
+ + LG G +G +LV DT + +A K + ++ + E R E Q++ H+
Sbjct: 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 85
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
+V L A++ ++LI+D GGELF + + ++E ++V + +
Sbjct: 86 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 145
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKDLVGSAYYVAPEVL 242
H +G+++RD+K EN L + + TDFGLS F + D G+ Y+AP+++
Sbjct: 146 HKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 202
Query: 243 R---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
R + D WS GV++Y LL+G PF + E++ I R + +S+
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 262
Query: 300 AKDIVKKMLHADPKERLS-----AAEVLNHPWMR 328
AKD+++++L DPK+RL A E+ H + +
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 296
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (533), Expect = 3e-64
Identities = 73/313 (23%), Positives = 124/313 (39%), Gaps = 40/313 (12%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+ K +VR Y + +G G +G T + A K + R + + RE
Sbjct: 9 VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL----FDRIIAKGHYSERAAANL 173
++++ H+ H N++ L + +++ D +++ E L
Sbjct: 68 LRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 126
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
QM+ + Y H+ G++HRDLKP N + ED LK DFGL+ V +
Sbjct: 127 VYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ--ADSEMTGYVVT 181
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
+Y APEV+ Y DIWS G I+ +++G F G I++ ++
Sbjct: 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 241
Query: 292 PW---------------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
N S A ++++KML D ++R++A E L H
Sbjct: 242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301
Query: 325 PWMRVDGDASDKP 337
P+ D D+P
Sbjct: 302 PYFESLHDTEDEP 314
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (531), Expect = 6e-64
Identities = 81/341 (23%), Positives = 128/341 (37%), Gaps = 49/341 (14%)
Query: 45 SATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK 104
S + ++ G+ +P E +Y + +G G FGV Y D+ + A K +
Sbjct: 1 SKVTTVVATPGQGPDRPQEV---SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---- 53
Query: 105 LINRDDVEDVRREVQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGG---EL 155
D RE+QIM L H NIV L+ + +D +NL++D
Sbjct: 54 ---LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
AK Q+ + Y HS G+ HRD+KP+N L + + LK DF
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDF 167
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGET 273
G + G+ + S YY APE++ Y + D+WSAG +L LL G P F G++
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 274 EQSIFDAILRG-------------------------HIDFSSDPWPNISSSAKDIVKKML 308
I++ ++ P A + ++L
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 287
Query: 309 HADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQF 349
P RL+ E H + D + K + + F
Sbjct: 288 EYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNF 328
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 208 bits (531), Expect = 7e-64
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 16/268 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + + LG G FG LV HK++ +A K + +K++ +E E +I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
+V+L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RN 245
+ +++RDLKPEN L + ++ TDFG + K L G+ +APE++ +
Sbjct: 160 LDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVK--GRTWTLCGTPEALAPEIILSKG 214
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
Y D W+ GV++Y + +G PPF+ + I++ I+ G + F + SS KD+++
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLLR 270
Query: 306 KMLHADPKERL-----SAAEVLNHPWMR 328
+L D +R ++ NH W
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 207 bits (527), Expect = 1e-63
Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 48/310 (15%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ++G+G FG + H+ T Q+ A K + RE++I+ L H
Sbjct: 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLL-KHE 69
Query: 129 NIVELKGAYED--------RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
N+V L + S+ L+ D C ++ + + ++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-----DVFKDLVGSAY 235
++Y H ++HRD+K N L + D LK DFGL+ F + + + V + +
Sbjct: 130 LYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE+L R+YG D+W AG I+ + + P G TEQ I + + + W
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 246
Query: 294 PNI----------------------------SSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PN+ A D++ K+L DP +R+ + + LNH
Sbjct: 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306
Query: 326 WMRVDGDASD 335
+ D SD
Sbjct: 307 FFWSDPMPSD 316
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 205 bits (522), Expect = 7e-63
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
++ Y R+LGRG++ + + ++ K++ + ++RE++I+ +L
Sbjct: 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVV------KILKPVKKKKIKREIKILENLR 87
Query: 126 GHRNIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
G NI+ L +D + L+ + + ++ +++ + Y
Sbjct: 88 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 144
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+ PE+L
Sbjct: 145 CHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 202
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFDAILRGHID 287
+ Y D+WS G +L ++ PF+ + + ++D I + +I+
Sbjct: 203 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262
Query: 288 --------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
S+ +S A D + K+L D + RL+A E + HP+
Sbjct: 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
Query: 328 R 328
Sbjct: 323 Y 323
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 202 bits (514), Expect = 3e-62
Identities = 80/295 (27%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME Y ++G G +GV Y + + FA K I K + RE+ I+
Sbjct: 1 MEK----YHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISIL 54
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
L H NIV+L + + L+ + + +G A + Q++ +
Sbjct: 55 KELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPE 240
YCH V+HRDLKP+N L + + LK DFGL+ F P + + + +Y AP+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 241 VLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI-- 296
VL + Y DIWS G I +++G P F G +E I R +S WPN+
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 297 -----------------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
S D++ KML DP +R++A + L H + +
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (510), Expect = 2e-61
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 69 YIFGRELGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG- 126
Y E+G G +G + K+ + A K + + REV ++ HL
Sbjct: 9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETF 67
Query: 127 -HRNIVELKGAYEDRHS-----VNLIMDLCAGGEL-FDRIIAKGHYSERAAANLCRQMVT 179
H N+V L + + L+ + + + + ++ Q++
Sbjct: 68 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS V+HRDLKP+N L +S +K DFGL+ + +V + +Y AP
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 184
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP---- 294
EVL ++ Y D+WS G I + P F G ++ IL + WP
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244
Query: 295 -------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+I KD++ K L +P +R+SA L+HP+ +
Sbjct: 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 199 bits (507), Expect = 3e-61
Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 38/296 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
M+ Y ++G G +G + +++T + A K + + RE+ ++
Sbjct: 1 MQK----YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLL 55
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
L H+NIV L + L+ + C G + Q++ +
Sbjct: 56 KELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPE 240
+CHS V+HRDLKP+N L + + LK +FGL+ F P + V + +Y P+
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 241 VL--RRNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPW---- 293
VL + Y D+WSAG I L + P F G I R + + W
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 294 ---------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P ++++ +D+++ +L +P +R+SA E L HP+
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (505), Expect = 4e-60
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 40/314 (12%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSV----NLIMDLCAGGELFDRIIAKGHYSERAAANL 173
++++ H+ H N++ L + S+ ++ + G + I+ ++ L
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V +
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVAT 181
Query: 234 AYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-- 289
+Y APE++ Y DIWS G I+ LL+G F G ILR
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 290 -------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
++ + + A D+++KML D +R++AA+ L H
Sbjct: 242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 325 PWMRVDGDASDKPL 338
+ D D+P+
Sbjct: 302 AYFAQYHDPDDEPV 315
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (502), Expect = 4e-60
Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 24/277 (8%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
N F +G G FG K + ++ ++DD D E++++ L
Sbjct: 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 68
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI----------------IAKGHYSERA 169
H NI+ L GA E R + L ++ G L D + S +
Sbjct: 69 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+ + + Y +HRDL N L E+ K DFGLS +
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYVKKTM 185
Query: 230 LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHID 287
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G
Sbjct: 186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 242
Query: 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ + N D++++ P ER S A++L
Sbjct: 243 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (500), Expect = 5e-60
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 38/296 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME+ + ++G G +GV Y +K T + A K I RE+ ++
Sbjct: 1 MEN----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLL 55
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCA-GGELFDRIIAKGHYSERAAANLCRQMVTV 180
L H NIV+L + + L+ + + F A + Q++
Sbjct: 56 KEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAP 239
+ +CHS V+HRDLKP+N L + + +K DFGL+ F P + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 240 EVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW---- 293
E+L Y DIWS G I +++ F G++E I R W
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 294 ---------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P + + ++ +MLH DP +R+SA L HP+ +
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 195 bits (495), Expect = 3e-59
Identities = 59/294 (20%), Positives = 104/294 (35%), Gaps = 24/294 (8%)
Query: 64 DVR--NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
++R N Y GR++G G FG YL T ++ A K + + E +I
Sbjct: 2 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIY 56
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
+ G I ++ + ++M+L +S + L QM++ +
Sbjct: 57 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--------KDLVGS 233
Y HS +HRD+KP+NFL + + + DFGL+ ++ K+L G+
Sbjct: 117 EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 234 AYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
A Y + D+ S G +L G P+ G + R S P
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236
Query: 293 ----WPNISSSAKDIVKKMLHADPKERLSAAEV---LNHPWMRVDGDASDKPLD 339
S + ++ + + + + R G + D D
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR-QGFSYDYVFD 289
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 195 bits (496), Expect = 4e-59
Identities = 61/290 (21%), Positives = 108/290 (37%), Gaps = 36/290 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R FG+ LG G FG T + ++ + L + + E + E+++M
Sbjct: 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 95
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH------------------ 164
L H NIV L GA + LI + C G+L + + +K
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155
Query: 165 -----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ Q+ + + +HRDL N L + +K DFGL+
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLAR 212
Query: 220 FFKPGD---VFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETE 274
V + ++APE L Y ++D+WS G++L+ + S GV P+ G
Sbjct: 213 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 272
Query: 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ F +++ D + I++ D ++R S + +
Sbjct: 273 DANFYKLIQNGFKM--DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (492), Expect = 6e-59
Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 23/275 (8%)
Query: 66 RNTYIFG-RELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMH 122
R+ + ELG G FG ++ K+Q A K + ++ + D E++ RE QIMH
Sbjct: 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMH 64
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVV 181
L + IV L G + ++ L+M++ GG L ++ K A L Q+ +
Sbjct: 65 QLD-NPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 122
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYV 237
Y +HRDL N L K +DFGLS D + +
Sbjct: 123 KYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 179
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
APE + R + + +D+WS GV ++ LS G P+ + I +G + P
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 236
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEV---LNHPWM 327
++ ++R V + +
Sbjct: 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (488), Expect = 1e-58
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 25/269 (9%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
M++ + +G+G+FG L ++ K A K I N + E +
Sbjct: 5 NMKE----LKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIK-----NDATAQAFLAEASV 53
Query: 121 MHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQM 177
M L H N+V+L G E++ + ++ + A G L D + ++G +
Sbjct: 54 MTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 112
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ Y +HRDL N L S ED+ K +DFGL+ +
Sbjct: 113 CEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQ--DTGKLPVKWT 167
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
APE LR + + ++D+WS G++L+ + S G P+ + + + +G + D
Sbjct: 168 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDG 224
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ +++K H D R S ++
Sbjct: 225 CPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (488), Expect = 2e-58
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 20/268 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+ELG G FG ++ K + A K + + + +++ E +M L + I
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALKDELLAEANVMQQLD-NPYI 70
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V + G E S L+M++ G L + H ++ L Q+ + Y +
Sbjct: 71 VRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV 129
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSAYYVAPEVLRRN- 245
HRDL N L + K +DFGLS + + + + APE +
Sbjct: 130 HRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +++D+WS GV+++ S G P+ G + + +G D++
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM 243
Query: 305 KKMLHADPKERLSAAEV---LNHPWMRV 329
D + R A V L + + V
Sbjct: 244 NLCWTYDVENRPGFAAVELRLRNYYYDV 271
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 2e-57
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 17/266 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQ---FACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+LG G FGV + A K + L + ++D REV MH L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYC 184
HRN++ L G + ++ +L G L DR+ GH+ + Q+ + Y
Sbjct: 70 -HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYYVAPE 240
S +HRDL N L + +K DFGL D + + + APE
Sbjct: 128 ESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 241 VLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
L+ R + +D W GV L+ + + G P+ G I I + +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL--PRPEDCPQ 242
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNH 324
+++ + P++R + + +
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 188 bits (478), Expect = 9e-57
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 17/272 (6%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS-RKLINRDDVEDVRREVQIM 121
E + + +G G+FG K ++ +I + + D E IM
Sbjct: 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTV 180
H N++ L+G V +I + G L + G ++ + R +
Sbjct: 82 GQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 140
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL------VGSA 234
+ Y M +HRDL N L + + K +DFGLS F +
Sbjct: 141 MKYLADMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 197
Query: 235 YYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292
+ APE ++ R + + +D+WS G++++ ++S G P+W T Q + +AI + D+ P
Sbjct: 198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ---DYRLPP 254
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ S+ ++ D R +++N
Sbjct: 255 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 2e-56
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 17/261 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV + A K I + ++ E ++M +L+ H
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSE----DEFIEEAKVMMNLS-HE 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + + + + +C+ + + Y S
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRRN 245
+HRDL N L + + +K +DFGLS + + + PEVL +
Sbjct: 120 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 246 -YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ +++DIW+ GV+++ + S G P+ T + I +G + S I
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVYTI 233
Query: 304 VKKMLHADPKERLSAAEVLNH 324
+ H ER + +L++
Sbjct: 234 MYSCWHEKADERPTFKILLSN 254
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (471), Expect = 4e-56
Identities = 67/265 (25%), Positives = 108/265 (40%), Gaps = 14/265 (5%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI-SSRKLINRDDVEDVRREVQIMHHL 124
R GR +G GQFG + + + +I + + + E +E M
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHY 183
H +IV+L G + V +IM+LC GEL + + + Q+ T + Y
Sbjct: 66 -DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEV 241
S +HRD+ N L SS+ +K DFGLS + + +K ++APE
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 242 LR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ R + + +D+W GV ++ IL+ GV PF G + I G PN +
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCPPT 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNH 324
++ K DP R E+
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (468), Expect = 2e-55
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 21/270 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + +LG+G FG ++ T T + A K++ + E +E Q+M L
Sbjct: 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL- 69
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHY 183
H +V+L + + ++ + + G L D + + + ++ Q+ + + Y
Sbjct: 70 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 128
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEV 241
M +HRDL+ N L E+ K DFGL+ + + + APE
Sbjct: 129 VERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 185
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ ++D+WS G++L L + G P+ G + + D + RG + P S
Sbjct: 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 242
Query: 300 AKDIVKKMLHADPKERLSAAEVLN--HPWM 327
D++ + +P+ER + + +
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 183 bits (466), Expect = 2e-55
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 17/264 (6%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ F +E+G GQFG+ +L + + A K+I + ED E ++M L+
Sbjct: 4 PSELTFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAM----SEEDFIEEAEVMMKLS 58
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYC 184
H +V+L G ++ + L+ + G L D + + ++ +C + + Y
Sbjct: 59 -HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVL 242
V+HRDL N L E+ +K +DFG++ F + +PEV
Sbjct: 118 EEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 243 RRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ Y +++D+WS GV+++ + S G P+ + + + I G F S+
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHV 231
Query: 301 KDIVKKMLHADPKERLSAAEVLNH 324
I+ P++R + + +L
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQ 255
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (470), Expect = 5e-55
Identities = 76/326 (23%), Positives = 124/326 (38%), Gaps = 53/326 (16%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+G V Y + +G G G+ + A K +S R N+ + RE
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRE 66
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
+ +M + H+NI+ L + E+ V L+M+L + +
Sbjct: 67 LVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMS 122
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L QM+ + + HS G++HRDLKP N + S D LK DFGL+ + V
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 179
Query: 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG------ 284
+ YY APEV+ Y DIWS G I+ ++ F G ++ ++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 285 --------------------------------HIDFSSDPWPNISSSAKDIVKKMLHADP 312
S+ +S A+D++ KML DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 313 KERLSAAEVLNHPWMRVDGDASDKPL 338
+R+S + L HP++ V D ++
Sbjct: 300 AKRISVDDALQHPYINVWYDPAEVEA 325
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 182 bits (462), Expect = 2e-54
Identities = 59/292 (20%), Positives = 98/292 (33%), Gaps = 22/292 (7%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V Y GR +G G FGV + T+ QQ A K R D +R E + L
Sbjct: 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLL 57
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
G I + ++ L++DL + +S + A +QM+ V
Sbjct: 58 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 117
Query: 185 HSMGVMHRDLKPENFLFSS--SAEDSPLKATDFGLSVFFKPGDV--------FKDLVGSA 234
H +++RD+KP+NFL S + + DFG+ F++ K+L G+A
Sbjct: 118 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177
Query: 235 YYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP- 292
Y++ R D+ + G + L G P+ G + R S P
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 237
Query: 293 ---WPNISSSAKDIVKKMLHADPKERLSAAEVLN--HPWMRVDGDASDKPLD 339
+ + + + D+ D
Sbjct: 238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFD 289
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 181 bits (460), Expect = 3e-54
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R +LG GQ+G Y K A K++ + +VE+ +E +M +
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK 71
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY--SERAAANLCRQMVTVVHY 183
H N+V+L G +I + G L D + S + Q+ + + Y
Sbjct: 72 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEV 241
+HRDL N L E+ +K DFGLS + APE
Sbjct: 131 LEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L N + ++D+W+ GV+L+ + + G+ P+ G +++ + + D+ +
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEK 244
Query: 300 AKDIVKKMLHADPKERLSAAEVL 322
++++ +P +R S AE+
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIH 267
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (455), Expect = 1e-53
Identities = 51/264 (19%), Positives = 100/264 (37%), Gaps = 19/264 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R T LG GQFG ++ + + A KS+ + + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYYNGH-TKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 66
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHY 183
H+ +V L + +I + G L D + + ++ Q+ + +
Sbjct: 67 -HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEV 241
+HRDL+ N L S + K DFGL+ + + + APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ + ++D+WS G++L +++ G P+ G T + + RG + N
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEE 238
Query: 300 AKDIVKKMLHADPKERLSAAEVLN 323
+++ P++R + + +
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRS 262
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (456), Expect = 2e-53
Identities = 66/285 (23%), Positives = 108/285 (37%), Gaps = 35/285 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG T D A K + + + E + E+++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH---------------- 164
+ +L H NIV L GA +I + C G+L + + K
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 165 --YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Q+ + + S +HRDL N L + K DFGL+ K
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIK 196
Query: 223 PGD---VFKDLVGSAYYVAPEVLRRNY-GAEADIWSAGVILYILLS-GVPPFWGETEQSI 277
V + ++APE + E+D+WS G+ L+ L S G P+ G S
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
F +++ + + DI+K ADP +R + +++
Sbjct: 257 FYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (453), Expect = 4e-53
Identities = 57/284 (20%), Positives = 110/284 (38%), Gaps = 30/284 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ-------QFACKSISSRKLINRDDVEDVRREV 118
R+ + G+ LG G FG L + + A K + + D+ D+ E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEM 69
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI----------------IAK 162
++M + H+NI+ L GA + +I++ + G L + + +
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 163 GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
S + + Q+ + Y S +HRDL N L +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 223 PGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
+ ++APE L R Y ++D+WS GV+L+ + + G P+ G + +F
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ GH D N ++ +++ HA P +R + +++
Sbjct: 250 LKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 177 bits (449), Expect = 1e-52
Identities = 63/295 (21%), Positives = 113/295 (38%), Gaps = 43/295 (14%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRR 116
+E RN + R++G G FG + + A K + + D D +R
Sbjct: 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQR 65
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY----------- 165
E +M + NIV+L G + L+ + A G+L + + + +
Sbjct: 66 EAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124
Query: 166 -------------SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
S + RQ+ + Y +HRDL N L E+ +K
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKI 181
Query: 213 TDFGLSVFFKPGDVFK---DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVP 267
DFGLS D +K + ++ PE + N Y E+D+W+ GV+L+ + S G+
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241
Query: 268 PFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
P++G + + + G+I N ++++ P +R S +
Sbjct: 242 PYYGMAHEEVIYYVRDGNI---LACPENCPLELYNLMRLCWSKLPADRPSFCSIH 293
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (440), Expect = 5e-51
Identities = 51/263 (19%), Positives = 95/263 (36%), Gaps = 14/263 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVRREVQIMHHLTG 126
+ + LG G FG Y ++ R+ + +++ E +M +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
+ ++ L G + + G L K + + N C Q+ ++Y
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR 243
++HRDL N L +K TDFGL+ + + ++A E +
Sbjct: 130 RRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 244 -RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R Y ++D+WS GV ++ L++ G P+ G I + +G P +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICTIDVY 243
Query: 302 DIVKKMLHADPKERLSAAEVLNH 324
I+ K D R E++
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIE 266
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (419), Expect = 5e-48
Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 29/283 (10%)
Query: 62 MEDVRNTYI--------FGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDD 110
++ V++ I F +GRG FG Y T D K A KS+ ++ + +
Sbjct: 14 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGE 71
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIAKGH-YSER 168
V E IM + H N++ L G S +++ G+L + I + H + +
Sbjct: 72 VSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
Q+ + + S +HRDL N + E +K DFGL+ +
Sbjct: 131 DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKEFDS 187
Query: 229 DL-----VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
++A E L+ + ++D+WS GV+L+ L++ G PP+ I +
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
L+G + +++ K H + R S +E+++
Sbjct: 248 LQGRRLLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 6e-48
Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIM 121
+ + +G G+FG Y K + + A K++ + D E IM
Sbjct: 6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIM 63
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTV 180
H NI+ L+G + +I + G L + K G +S + R +
Sbjct: 64 GQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYY 236
+ Y +M +HRDL N L +S+ K +DFGLS + +
Sbjct: 123 MKYLANMNYVHRDLAARNILVNSNLV---CKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 179
Query: 237 VAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
APE + R + + +D+WS G++++ +++ G P+W + + AI G F
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRLPTPM 236
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ S+ ++ + + R A++++
Sbjct: 237 DCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (412), Expect = 4e-47
Identities = 57/289 (19%), Positives = 117/289 (40%), Gaps = 35/289 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R RELG+G FG+ Y K + + + A K++ + + + + E +
Sbjct: 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASV 76
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----------YSERAA 170
M ++V L G +IM+L G+L + + S
Sbjct: 77 MKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-- 228
+ ++ + Y ++ +HRDL N + + ED +K DFG++ D ++
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKG 192
Query: 229 -DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGV-PPFWGETEQSIFDAILRGH 285
+ +++PE L+ + +D+WS GV+L+ + + P+ G + + + ++ G
Sbjct: 193 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 252
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN------HPWMR 328
+ D N ++++ +PK R S E+++ P R
Sbjct: 253 LL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 298
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 1e-44
Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 34/286 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ G+ LGRG FG T + A K + ++ + + E++I
Sbjct: 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKI 69
Query: 121 MHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRI----------------IAKG 163
+ H+ H N+V L GA + + +I++ C G L + + K
Sbjct: 70 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129
Query: 164 HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+ Q+ + + S +HRDL N L S E + +K DFGL+
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYK 186
Query: 224 GDVF---KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGV-PPFWGETEQSIF 278
+ D ++APE + Y ++D+WS GV+L+ + S P+ G F
Sbjct: 187 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246
Query: 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
L+ + + H +P +R + +E++ H
Sbjct: 247 CRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 1e-42
Identities = 55/299 (18%), Positives = 100/299 (33%), Gaps = 51/299 (17%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
+ T + +G+G+FG + K ++ A K SSR+ + E+ L
Sbjct: 1 IARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSRE----ERSWFREAEIYQTVML 54
Query: 125 TGHRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGHYSERA-------AANL 173
H NI+ A + L+ D G LFD + E A+ L
Sbjct: 55 R-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFK 228
+ +V + HRDLK +N L ++ D GL+V
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 229 DLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSGVPPFWGETE------- 274
VG+ Y+APEVL + ADI++ G++ + + +
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 275 --------QSIFDAILRGHIDFSSDPW---PNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ + + + + I+++ +A+ RL+A +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 148 bits (374), Expect = 4e-41
Identities = 60/335 (17%), Positives = 111/335 (33%), Gaps = 72/335 (21%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
G+P +D R YI R+LG G F +L A K + K+ E E
Sbjct: 6 KGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDE 59
Query: 118 VQIMHHL----------TGHRNIVELKGAYEDRHSVNLIMDL-----CAGGELFDRIIAK 162
++++ + G +I++L + + + + + +
Sbjct: 60 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH 119
Query: 163 GHYSERAAANLCRQMVTVVHYC-HSMGVMHRDLKPENFLFSSS---AEDSPLKATDFGLS 218
+ +Q++ + Y G++H D+KPEN L +K D G +
Sbjct: 120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 179
Query: 219 VFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
++ + Y +PEVL +G ADIWS +++ L++G F + S
Sbjct: 180 CWYDEHYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 237
Query: 278 FDAI--------------------------------------------LRGHIDFSSDPW 293
L +
Sbjct: 238 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS 297
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + D + ML DP++R A ++NHPW++
Sbjct: 298 KDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 93.1 bits (231), Expect = 7e-24
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
K +AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 421 DGNGTIDYIEFITATMH 437
D +GTIDY EFI AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 41.9 bits (98), Expect = 8e-06
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEA---ADVDGNGTIDYIEFITATMHMNRVE 442
+SG I ++ + RLSE E+ L E D D +GTI + E +
Sbjct: 2 SSGHIDDDD-----KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56
Query: 443 REEHLYKAFEYFDKDNS 459
E + + D D S
Sbjct: 57 MESEIKDLMDAADIDKS 73
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 89.5 bits (221), Expect = 2e-21
Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 25/201 (12%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACK-----SISSRKLINRDDVEDVR-REVQIMHHLT 125
G+ +G G+ + + + K S +K+ + D D+ + I
Sbjct: 5 GKLMGEGKESAVFNCYSEKF-GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63
Query: 126 GHRNIVELKGAYEDRH----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
R + +L+G + ++M+L EL+ + ++ V
Sbjct: 64 EFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELY-------RVRVENPDEVLDMILEEV 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ G++H DL N L S + + DF SV +++++
Sbjct: 117 AKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSVEVGEEG-WREILERDVRNIITY 171
Query: 242 LRRNYGAEADIWSAGVILYIL 262
R Y E DI S I IL
Sbjct: 172 FSRTYRTEKDINS--AIDRIL 190
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.6 bits (188), Expect = 3e-18
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 424 GTIDYIEFIT 433
I++ EF+
Sbjct: 61 HQIEFSEFLA 70
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 79.7 bits (195), Expect = 4e-18
Identities = 65/103 (63%), Positives = 81/103 (78%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSW 466
GTIDY EFI AT+H+N++EREE+L AF YFDKD S
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDE 103
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 75.4 bits (185), Expect = 1e-17
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ ++I + +FK DT+ G I+ EL L L ++ EVR++M D DG+G I
Sbjct: 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFIS 59
Query: 428 YIEFITATMHMNRVEREEHLYKAF 451
+ EF + + K F
Sbjct: 60 FDEFT--DFARANRGLVKDVSKIF 81
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 77.9 bits (191), Expect = 2e-17
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KL+ ++ + E + +E EI + F SG ++ EE K S+
Sbjct: 3 KLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKF 60
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ D +G+GTID+ EFI A +R + E+ L AF +D D +
Sbjct: 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGN 109
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 18/92 (19%)
Query: 373 MGLKEMFKSMDTDNSGTITFEELKAGL------------PKLGTRLSESEVRQLMEAADV 420
LK F D D +G I+ E+ + E ++ D
Sbjct: 95 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDT 154
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452
+ +G + EFI + + + + +
Sbjct: 155 NRDGKLSLEEFIRG------AKSDPSIVRLLQ 180
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.0 bits (103), Expect = 1e-05
Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 14/115 (12%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K + + +F++ D + GTI F E L E +++
Sbjct: 45 KKIYGNFFPYGDASKFA--EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFS 102
Query: 417 AADVDGNGTIDYIEF---ITATMHMNRVER---------EEHLYKAFEYFDKDNS 459
D+DGNG I E + A M E+ K F D +
Sbjct: 103 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 157
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 76.9 bits (188), Expect = 2e-17
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
E L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 425 TIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
TID+ EF++ M + EE L +AF+ FD+D +
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 96
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 56.8 bits (136), Expect = 2e-10
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
L E FK D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G I+Y EF+
Sbjct: 84 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 141
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.4 bits (187), Expect = 8e-17
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 365 ENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ + L+E +K + SGT+ E K + V + A D +G+
Sbjct: 13 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 72
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
TID++E++ A + R E L F+ +DKD +
Sbjct: 73 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRN 108
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.3 bits (101), Expect = 2e-05
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K KV + + + + MF++ DT+ TI F E A L + E +++ +
Sbjct: 45 KRFFKVPDNEEATQYV---EAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK 101
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQW 463
D D NG ID E + + ++++ + E K + +
Sbjct: 102 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEV 148
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.9 bits (183), Expect = 9e-17
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 424 GTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
I++ EF+ + + + E+ L +AF+ FDK+
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGD 97
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.5 bits (130), Expect = 1e-09
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
E FK D + G I+ ELK L +G +L+++EV ++ DG+G I+ +F
Sbjct: 86 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAA 142
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 78.5 bits (192), Expect = 1e-16
Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 1/197 (0%)
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
E Q D H + I+ ++ K+ D K + R
Sbjct: 22 EELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAA 81
Query: 332 DASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391
+ + +K + L+ LSEE+ L+++F S SG +
Sbjct: 82 RGDAAAEKQRLASLLKDLED-DASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFS 140
Query: 392 FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
F++LK L K + E +++L + D G + YI + + + +
Sbjct: 141 FQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTN 200
Query: 452 EYFDKDNSTSQWKSWNM 468
+ +
Sbjct: 201 SNGTLSRKEFREHFVRL 217
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 58.5 bits (140), Expect = 5e-10
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
++ D D SG ++ EE++ L + + DVD + ++ Y EF+
Sbjct: 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316
Query: 436 MHM 438
+ M
Sbjct: 317 LLM 319
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 37.7 bits (86), Expect = 0.002
Identities = 7/45 (15%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
+++KV + ++ + F +D D+S +++++E
Sbjct: 273 EEVQKVLEDAHIPESARKKF---EHQFSVVDVDDSKSLSYQEFVM 314
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 70.4 bits (172), Expect = 5e-16
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 427 DYIEFIT 433
D+ EF+T
Sbjct: 62 DFPEFLT 68
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 36.1 bits (83), Expect = 6e-04
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 406 LSESEVRQLMEA---ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L+E ++ + EA D DG+GTI E T + + E L D D +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 58
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 70.3 bits (172), Expect = 5e-16
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTID 427
EEE + FK D + G I F+E K + K+G L+++EV + M+ AD DGNG ID
Sbjct: 1 EEE---ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 57
Query: 428 YIEFIT 433
EF+
Sbjct: 58 IPEFMD 63
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 34.4 bits (79), Expect = 0.002
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER-EEHLYKAFEYFDKDNS 459
E E+ + + D +G+G ID+ EF + + + +A + D+D +
Sbjct: 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGN 53
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 70.4 bits (172), Expect = 6e-16
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67
Query: 427 DYIEFIT 433
D+ EF+
Sbjct: 68 DFEEFLV 74
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 40.0 bits (93), Expect = 3e-05
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 406 LSESEVRQLMEA---ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
LSE + + A D DG G I E T + + +E L E D+D S
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGS 64
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 70.4 bits (172), Expect = 7e-16
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNS-GTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
K E L+EE+ K F G+I+ +EL + LG + E++++++ D
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 420 VDGNGTIDYIEFIT 433
DG+GT+D+ EF+
Sbjct: 63 EDGSGTVDFDEFLV 76
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 8e-16
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KLK ++ + +E+E+ + F SG + + + ++
Sbjct: 4 KLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTKF 61
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+ D + +G I++ EFI A +R +E L AF+ +D DN
Sbjct: 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDND 110
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (109), Expect = 1e-06
Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 18/109 (16%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL------------PKLGTRLS 407
++ ++ L+ FK D DN G IT E+ +
Sbjct: 83 IQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTP 142
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
E V ++ D + +G + EF + + + +A +D
Sbjct: 143 EKRVDRIFAMMDKNADGKLTLQEFQEG------SKADPSIVQALSLYDG 185
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (95), Expect = 9e-05
Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 14/115 (12%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
+ K + +F D + G I F E L + ++R +
Sbjct: 46 QKIYKQFFPFGDPTKFA--TFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFK 103
Query: 417 AADVDGNGTIDYIEFITATMHMNRV------------EREEHLYKAFEYFDKDNS 459
D+D +G I E + + ++ E+ + + F DK+
Sbjct: 104 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNAD 158
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 70.8 bits (172), Expect = 3e-15
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
K E L+EE+ K F G+I+ +EL + LG + E++++++ D
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61
Query: 420 VDGNGTIDYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475
DG+GT+D+ EF+ + + + EE L F FDK+ +
Sbjct: 62 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121
Query: 476 EM 477
E
Sbjct: 122 ET 123
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 55.7 bits (133), Expect = 5e-10
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
L ++F+ D + G I EELK L G ++E ++ +LM+ D + +G IDY EF+
Sbjct: 93 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 150
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 67.6 bits (165), Expect = 6e-15
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
S EE + + F+ D DNSGTIT ++L+ +LG L+E E+++++ AD + + ID
Sbjct: 7 SREE---ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 428 YIEFIT 433
EFI
Sbjct: 64 EDEFIR 69
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 39.5 bits (92), Expect = 5e-05
Identities = 13/57 (22%), Positives = 22/57 (38%)
Query: 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
G R S E+ + D D +GTI + + EE L + D+++
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD 59
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 70.0 bits (170), Expect = 7e-15
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMHMN----RVEREEHLYKAFEYFDKDN----STSQWKSWNMRLRSIIWEMQ 478
D+ EF+ + + + EE L F FDK+ + + E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 59.6 bits (143), Expect = 3e-11
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
L F+ D + G I EEL L G ++E ++ LM+ +D + +G ID+ EF+
Sbjct: 98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 41.5 bits (96), Expect = 5e-05
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 406 LSESEVRQLMEA---ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQ 462
LSE + + A D DG G I E T + + +E L E D+D S +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 463 WKSWNMRLRSIIWEMQKQ 480
+ + + +
Sbjct: 74 DFEEFLVMMVRQMKEDAK 91
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 69.8 bits (170), Expect = 1e-14
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 19/133 (14%)
Query: 357 KVALKVIAENLSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLG--------TRLS 407
++ + +EE+I G + +F + I+ EL+ L ++ S
Sbjct: 1 EIEANIEEIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFS 59
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWN 467
+ +++ D DG+G + EF + + K + D D S +
Sbjct: 60 IETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYE- 112
Query: 468 MRLRSIIWEMQKQ 480
+R + E +
Sbjct: 113 --MRKALEEAGFK 123
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 54.0 bits (129), Expect = 3e-09
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
+++++ +D D SGT+ E++ L + G +L ++ Q++ A D ID+ F+
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCL 152
Query: 436 MHMNRVEREEHLYKAFEYFDKDNS 459
+ + E L+K F+ D +N+
Sbjct: 153 VRL------EILFKIFKQLDPENT 170
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 37.1 bits (85), Expect = 0.002
Identities = 11/79 (13%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
++ E + L ++ + D+ I F+ L +L + ++ + D
Sbjct: 113 MRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRL------EILFKIFKQLD 166
Query: 420 VDGNG--TIDYIEFITATM 436
+ G +D I +++ ++
Sbjct: 167 PENTGTIQLDLISWLSFSV 185
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 66.9 bits (163), Expect = 3e-14
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGN 423
LS+ +K++F+ +D D SG + +ELK L K L+ESE + LM+AAD DG+
Sbjct: 35 LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94
Query: 424 GTIDYIEFI 432
G I EF
Sbjct: 95 GKIGADEFQ 103
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.1 bits (109), Expect = 5e-07
Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 12/101 (11%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVD 421
I + LS E+I + T ++ G +++S S+V+ + D D
Sbjct: 2 ITDILSAEDI---AAALQECQDP--DTFEPQKF---FQTSGLSKMSASQVKDIFRFIDND 53
Query: 422 GNGTIDYIEFITATMHMNRVER---EEHLYKAFEYFDKDNS 459
+G +D E R E + D D
Sbjct: 54 QSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 65.0 bits (158), Expect = 5e-14
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
+K ++ +EEE L ++F+ D + G I EELK L G ++E ++ +LM+ D
Sbjct: 5 MKDDSKGKTEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61
Query: 420 VDGNGTIDYIEFIT 433
+ +G IDY EF+
Sbjct: 62 KNNDGRIDYDEFLE 75
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 38.0 bits (88), Expect = 2e-04
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
+E E+ L D + +G ID E E+ + + + DK+N
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 65
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.3 bits (156), Expect = 6e-14
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 57
Query: 428 YIEFIT 433
Y EF+
Sbjct: 58 YEEFVQ 63
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 34.2 bits (78), Expect = 0.002
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
SE E+R+ D DGNG I E ++ +E + + D D
Sbjct: 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 53
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 67.9 bits (165), Expect = 7e-14
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KL K L + + EI + F + SG + E+ + S +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L D D NG I + EFIT +R EE L AFE +D ++
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHD 113
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.0 bits (121), Expect = 4e-08
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
K S E+ +F D DN+G I FEE L E ++ E D
Sbjct: 52 YKQFFPFGSPEDFA--NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYD 109
Query: 420 VDGNGTIDYIEFITATMHMNRV------------EREEHLYKAFEYFDKDNS 459
++ +G I + E +T + ++ E + K F+ DK+
Sbjct: 110 LNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED 161
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.5 bits (161), Expect = 8e-14
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
EE+ ++E F D D +GTI +ELK + LG + E+++++ D +G G +++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 429 IEFITA-TMHMNRVEREEHLYKAFEYFDKDNSTSQWKS 465
+F+T T M+ + +E + KAF+ FD D +
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFK 99
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.4 bits (140), Expect = 4e-11
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
+ FK D D +G I+F+ LK +LG L++ E++++++ AD DG+G + EF+
Sbjct: 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 64.9 bits (158), Expect = 1e-13
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+K++FK++D D SG I EELK L G L+++E + ++AAD DG+G I EF
Sbjct: 43 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 102
Query: 432 IT 433
T
Sbjct: 103 ET 104
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 49.5 bits (118), Expect = 3e-08
Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
L ++++ ++A V G+ ++ +F + K F+ D D S
Sbjct: 6 LKADDIKKALDA--VKAEGSFNHKKFFALVGLKAM--SANDVKKVFKAIDADAS 55
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 47.6 bits (113), Expect = 1e-07
Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ L ++I K+ ++ + G+ ++ A + +S ++V+++ +A D D
Sbjct: 2 AKDLLKADDI---KKALDAVKAE--GSFNHKKFFALVGL--KAMSANDVKKVFKAIDADA 54
Query: 423 NGTIDYIEFITATMHMNRVER---EEHLYKAFEYFDKDNS 459
+G I+ E R + + DKD
Sbjct: 55 SGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGD 94
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 63.4 bits (154), Expect = 1e-13
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ SEEE L F+ D + G I EEL L G + E ++ LM+ +D + +
Sbjct: 3 AKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 59
Query: 424 GTIDYIEFIT 433
G ID+ EF+
Sbjct: 60 GRIDFDEFLK 69
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 38.4 bits (89), Expect = 1e-04
Identities = 13/53 (24%), Positives = 19/53 (35%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
SE E+ D + +G ID E EE + + DK+N
Sbjct: 7 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 59
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 63.0 bits (153), Expect = 2e-13
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
K +F+ D + G ++ +E + ++ ++ + E DVDGNG ++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 435 TMHM 438
M
Sbjct: 63 IEKM 66
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.9 bits (93), Expect = 3e-05
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
S +++ E D + +G + EF + + +E + K FE D D +
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGN 51
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 62.2 bits (151), Expect = 5e-13
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 368 SEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGN 423
+++ LK +F+ + ++ EELK + L + L + D +G+
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 424 GTIDYIEFITATMHMNR 440
G + + EF +++
Sbjct: 62 GEVSFEEFQVLVKKISQ 78
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.2 bits (148), Expect = 6e-13
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
+ F+ D +++G ++ +L+ L LG +L+++EV +L++ +VD NG IDY +FI
Sbjct: 3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 62.7 bits (152), Expect = 7e-13
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNG 424
++ + +KE+F+ +D D SG I EELK L G L+++E + L+ A D D +G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 425 TIDYIEFIT 433
I EF
Sbjct: 96 KIGADEFAK 104
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 47.6 bits (113), Expect = 1e-07
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 10/96 (10%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L ++I F + GT ++ + G ++++V+++ E D D +G I
Sbjct: 6 LKADDINKAISAF-----KDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQSGFI 58
Query: 427 DYIEFITATMHMNRVER---EEHLYKAFEYFDKDNS 459
+ E + R + D D+
Sbjct: 59 EEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHD 94
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 64.3 bits (156), Expect = 1e-12
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 365 ENLSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLM 415
+ LSEEEI K +F + D+ I+ +EL+ L ++ ++ S R ++
Sbjct: 11 KVLSEEEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 69
Query: 416 EAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
D DGNG + +EF + + F FD D S
Sbjct: 70 NLMDRDGNGKLGLVEFNILWNRIR------NYLTIFRKFDLDKS 107
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 64.0 bits (155), Expect = 2e-12
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
+F+ D D SG+++ E++ + G +L ++ Q++ A D ID+ F+
Sbjct: 93 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFV 151
Query: 433 TATMHMNRVEREEHLYKAFEYFDKDNS 459
+ + E L+K F+ D +N+
Sbjct: 152 RCLVRL------EILFKIFKQLDPENT 172
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 40.5 bits (94), Expect = 2e-04
Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
++A++ L + ++ + D+ I F+ L +L + ++ +
Sbjct: 116 RMAIEAAGFKLPCQLH----QVIVARFADDELIIDFDNFVRCLVRLEI------LFKIFK 165
Query: 417 AADVDGNG--TIDYIEFITATM 436
D + G +D I +++ ++
Sbjct: 166 QLDPENTGTIQLDLISWLSFSV 187
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 61.9 bits (150), Expect = 1e-12
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDG 422
L ++ +K++F +D D SG I +EL + L LS E + LM A D DG
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93
Query: 423 NGTIDYIEFIT 433
+G I EF T
Sbjct: 94 DGKIGVEEFST 104
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 45.7 bits (108), Expect = 7e-07
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 10/100 (10%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + LS E+I K+ + + ++ + + S +V+++ D D
Sbjct: 2 MTDLLSAEDI---KKAIGAFTAA--DSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDK 54
Query: 423 NGTIDYIEFITATMHMNRVER---EEHLYKAFEYFDKDNS 459
+G I+ E + + R + DKD
Sbjct: 55 SGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 63.8 bits (154), Expect = 1e-12
Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 366 NLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
S EI L E+FK + + + G I EE + L K + S ++ + D N
Sbjct: 10 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHN 68
Query: 424 GTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNS 459
G + + EF ++ ++ ++ +F+ +D
Sbjct: 69 GILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQ 105
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.5 bits (91), Expect = 3e-04
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVDGNGTID 427
F+ D G I +E+K + + E + + E AD +G ID
Sbjct: 94 HFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKID 153
Query: 428 YIEFITA 434
E+ +
Sbjct: 154 KEEWRSL 160
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 61.5 bits (149), Expect = 2e-12
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGN 423
L+ + + +K+ F +D D SG I +ELK L L+++E + + D DG+
Sbjct: 34 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 93
Query: 424 GTIDYIEFIT 433
G I EF
Sbjct: 94 GMIGVDEFAA 103
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 48.0 bits (114), Expect = 9e-08
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 12/98 (12%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNG 424
L + ++ + + +E K+G S +V++ D D +G
Sbjct: 4 GLKDADV---AAALAACSAA--DSFKHKEF---FAKVGLASKSLDDVKKAFYVIDQDKSG 55
Query: 425 TIDYIEFITATMHMNRVER---EEHLYKAFEYFDKDNS 459
I+ E + + R + DKD
Sbjct: 56 FIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 93
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 63.2 bits (152), Expect = 2e-12
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 16/107 (14%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR-----------QLME 416
S+ + +K F +D D G IT + ++ +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEH-----LYKAFEYFDKDN 458
V G ID FI + M + + L F D +
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNE 107
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 41.6 bits (96), Expect = 5e-05
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
L F+++DT+ I+ +E L L ++ +A D + +G +
Sbjct: 90 SVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDTNNDGLLSL 147
Query: 429 IEFITA 434
EF+ A
Sbjct: 148 EEFVIA 153
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.3 bits (153), Expect = 2e-12
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-VRQLMEAADVDGNG 424
N ++ E+ L FK + SG + E K + S L A D G
Sbjct: 9 NFTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTG 66
Query: 425 TIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
++ + +F+TA + R E L F +D +
Sbjct: 67 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKD 101
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.5 bits (112), Expect = 6e-07
Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 14/113 (12%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA 418
+ +F + DT +G++ FE+ L L ++R
Sbjct: 39 IYAQFFPHGDASTYA--HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY 96
Query: 419 DVDGNGTIDYIEFITATMHMNRVER------------EEHLYKAFEYFDKDNS 459
D++ +G I+ E + + + +H+ F+ DK+
Sbjct: 97 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 149
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.5 bits (99), Expect = 3e-05
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 18/95 (18%)
Query: 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGT------------RLSESEVRQLMEAADV 420
L+ F D + G I EE+ + + V + D
Sbjct: 87 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDK 146
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+ +G + EF+ + + ++++ ++ + F
Sbjct: 147 NKDGIVTLDEFLES------CQEDDNIMRSLQLFQ 175
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 59.9 bits (145), Expect = 5e-12
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVD 421
E+ + + F + + ELK L + E+ ++LM D +
Sbjct: 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 64
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 65 RDNEVDFQEYCV 76
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.6 bits (149), Expect = 6e-12
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437
F ++D D SGT+ EL+ + +G RLS + +++ NG I + +++ +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK--RYSKNGRIFFDDYVACCVK 132
Query: 438 MNRVEREEHLYKAFEYFDKDNS 459
+ L F D
Sbjct: 133 L------RALTDFFRKRDHLQQ 148
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (134), Expect = 7e-10
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYI 429
+ F ++ G + EEL+ L + G + S R ++ D D G + +
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQKQ 480
F +N + F D+D S + LR I M +
Sbjct: 61 AFKELWAALN------AWKENFMTVDQDGS---GTVEHHELRQAIGLMGYR 102
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (96), Expect = 6e-05
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
+ A+ ++ LS + + + K + G I F++ A KL +
Sbjct: 93 RQAIGLMGYRLSPQTL---TTIVKRYSKN--GRIFFDDYVACCVKLRA------LTDFFR 141
Query: 417 AADVDGNG--TIDYIEFITATMHM 438
D G Y +F+ TM +
Sbjct: 142 KRDHLQQGSANFIYDDFLQGTMAI 165
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 61.5 bits (148), Expect = 1e-11
Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 22/133 (16%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-----LSESEVRQLMEAADVD 421
+ I K MF +D +++G I+ +E+ + +++ + A
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 422 GNGT-----IDYIEFITATMHMNRVEREEH-----------LYKAFEYFDKDNS-TSQWK 464
G G D+ +I + E E++ F+ DKD +
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 465 SWNMRLRSIIWEM 477
W ++
Sbjct: 126 EWKAYTKAAGIIQ 138
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 55.0 bits (131), Expect = 2e-09
Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 11/157 (7%)
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
+ D G I + A DIV L A P++ + + +
Sbjct: 19 NFLDVNHNGKISLD-----EMVYKASDIVINNLGATPEQ-----AKRHKDAVEAFFGGAG 68
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
KL L+ A+N + +F +D D +G IT +E
Sbjct: 69 MKYG-VETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEW 127
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
KA G S + + D+D +G +D E
Sbjct: 128 KAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 164
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.9 bits (142), Expect = 1e-11
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-------------- 410
+ L K F D ++ G + +EL+A K ++ + +
Sbjct: 9 DGLDPNR-FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 67
Query: 411 --VRQLMEAADVDGNGTIDYIEFITAT 435
+M+ D + + + EF+ +T
Sbjct: 68 RMREHVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (146), Expect = 1e-11
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVD 421
+ L F ++ G I +EL+ L + G + R ++ D D
Sbjct: 1 FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS-TSQWKSWNMRLRSIIWEMQKQ 480
+GT+ + EF +N + F FD D S T + L ++ + + Q
Sbjct: 60 MSGTMGFNEFKELWAVLN------GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQ 113
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.7 bits (123), Expect = 2e-08
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
+ F S DTD SGT+ +EL+ L +G RLS V + + NG I + ++I +
Sbjct: 81 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK--RYSTNGKITFDDYIACCV 138
Query: 437 HMNRVEREEHLYKAFEYFDKDNS 459
+ L +F D
Sbjct: 139 KL------RALTDSFRRRDTAQQ 155
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.4 bits (148), Expect = 2e-11
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 351 AMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE 408
L K L+ + +EEE+ + F SG IT +E + K
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADP 61
Query: 409 SE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458
+ + + D + +GT+D+ E++ A + + + L AF +D D
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDG 112
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.6 bits (94), Expect = 1e-04
Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 23/156 (14%)
Query: 346 MKQFRAMNKLKKVALKVIAENLSEEEIMG-----LKEMFKSMDTDNSGTITFEELKAGLP 400
+ F ++ + S+ + +F+S D ++ GT+ F+E L
Sbjct: 31 YQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALH 90
Query: 401 KLGTRLSESEVRQLMEAADVDGNGTIDYIEF--------------ITATMHMNRVEREEH 446
+ ++ DVDGNGTI E T + + E+
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKR 150
Query: 447 LYKAFEYFDKDN----STSQWKSWNMRLRSIIWEMQ 478
K + +F K + + ++ + + I+ +Q
Sbjct: 151 AEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 186
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.6 bits (139), Expect = 2e-11
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG--TRLSESEVRQLMEAADVDGNGT 425
S EEI G E+F + + I+ EELK + LG S + +++E D +G+G
Sbjct: 3 SPEEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 426 IDYIEFIT 433
+ + EF+
Sbjct: 62 VSFEEFLV 69
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 2e-11
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ E+ +F S+ +G ++ +++K L L + ++ E +D+D +G +
Sbjct: 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGML 60
Query: 427 DYIEFITATMHMNRVEREEH 446
D EF A M + E+
Sbjct: 61 DRDEFAVA-MFLVYCALEKE 79
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 4e-11
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
+ + F++ DT + TI+ EE +A + L++ + +L V+ G + Y
Sbjct: 16 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 75
Query: 429 IEFITA 434
+F++
Sbjct: 76 PDFLSR 81
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 56.5 bits (136), Expect = 7e-11
Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 369 EEEIMGLKEMF-KSMDTD-NSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVD 421
E + L +F + + ++ +ELK L + V ++M+ D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN 64
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458
G+G +D+ EF+ + + + +F +++
Sbjct: 65 GDGEVDFQEFVVL---VAALTVACN-----NFFWENS 93
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 56.0 bits (135), Expect = 1e-10
Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 364 AENLS--EEEIMGLKEMF-KSMDTD-NSGTITFEELKAGLPKLG--TRLSESEVRQLMEA 417
AE L+ EE I + F + +++ E K + + + + M++
Sbjct: 3 AEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKS 62
Query: 418 ADVDGNGTIDYIEF---ITATMHMNRVEREEHLYK 449
DV+ + + + E+ I R +++ + K
Sbjct: 63 LDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRK 97
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 2e-10
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+S E E+F D D G ++ E++ L T L + + + D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKL 61
Query: 427 DYIEFITATMHM 438
+F A H+
Sbjct: 62 SKDQFALA-FHL 72
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.0 bits (132), Expect = 2e-10
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+++E+ FK++ D +G I K K E+ + E +D D +G +
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL--PILELSHIWELSDFDKDGAL 60
Query: 427 DYIEFITATMHMNRVEREEH 446
EF A H+ + +
Sbjct: 61 TLDEFCAA-FHLVVARKNGY 79
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 55.0 bits (132), Expect = 2e-10
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGN 423
E + + F D G +T E+L+ + K + V ++M+ D +
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 424 GTIDYIEFIT 433
G + + F +
Sbjct: 64 GKVGFQSFFS 73
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 34.6 bits (79), Expect = 0.004
Identities = 7/60 (11%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
++K + + ++ K +D G + F+ + + L ++ V +
Sbjct: 34 MEKEFPGFLENQKDPLAVD---KIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHM 90
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 56.9 bits (136), Expect = 4e-10
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 22/143 (15%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAG-----LPKLGTRLSESEVRQL 414
+K+ + + I K MF +D + +G IT +E+ + KL +++ Q+
Sbjct: 1 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60
Query: 415 MEAAD-----VDGNGTIDYIEFITATMHMNRVER-----------EEHLYKAFEYFDKDN 458
A ++ I + +F+ + E E F+ FDKD
Sbjct: 61 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120
Query: 459 S-TSQWKSWNMRLRSIIWEMQKQ 480
S T W + ++
Sbjct: 121 SGTITLDEWKAYGKISGISPSQE 143
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 52.7 bits (125), Expect = 1e-08
Identities = 33/161 (20%), Positives = 50/161 (31%), Gaps = 11/161 (6%)
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
D G I I S A D + L A P++ + + +
Sbjct: 21 DFLDINGNGKITLD-----EIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGK 75
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
+ + + +L LK A N +F D D SGTIT +E
Sbjct: 76 E------IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEW 129
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
KA G S+ + D+D G +D E +
Sbjct: 130 KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 55.8 bits (133), Expect = 7e-10
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 26/117 (22%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL---------------SESE 410
++ + LK+ F D D +G + + + +
Sbjct: 3 AIASDR---LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGL 59
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRV--------EREEHLYKAFEYFDKDNS 459
L + A V +G++ +FI T ++ + DK+
Sbjct: 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNAD 116
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 44.3 bits (103), Expect = 6e-06
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
+K + D + G I +E A L LG ++E + D +GNG + E +TA
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALGMS--KAEAAEAFNQVDTNGNGELSLDELLTA 161
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 55.7 bits (133), Expect = 8e-10
Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 18/117 (15%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVD 421
EE+ + +F + D+ ++ EL L K+ T R ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQ 478
G + + + ++ FD D S + S L
Sbjct: 60 TTGKLGF------EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSE---LPGAFEAAG 107
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 54.9 bits (131), Expect = 2e-09
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
+ ++K D D SGTI EL G L+E ++ D G +D+ FI+
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCL 138
Query: 436 MHMNRVEREEHLYKAFEYFDKDNS 459
+ R + +++AF+ DKD +
Sbjct: 139 V------RLDAMFRAFKSLDKDGT 156
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 55.8 bits (133), Expect = 9e-10
Identities = 14/128 (10%), Positives = 36/128 (28%), Gaps = 26/128 (20%)
Query: 367 LSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLGTRLS---------------ESE 410
L++ + +K F D ++ G+I + + + + E E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 411 VRQLMEAADVDGNGTIDY---------IEFITATMHMNRVEREEHLYKAFEYFDKDNSTS 461
R L AD++ + + + ++ + + F+ D
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG- 120
Query: 462 QWKSWNMR 469
+
Sbjct: 121 IVDLEEFQ 128
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 45.8 bits (107), Expect = 2e-06
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+L + +FK MD G + EE + L ++V + G
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154
Query: 425 TIDYIEFITA 434
T D +
Sbjct: 155 TFDLNRYKEL 164
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.6 bits (130), Expect = 1e-09
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
+ E F+ D + +G + EL+ L LG +++E EV ++ D NG I+Y
Sbjct: 73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINY 131
Query: 429 IEFITATM 436
F+ +
Sbjct: 132 EAFLKHIL 139
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (128), Expect = 2e-09
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 8/108 (7%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN-----GTIDYI 429
KE F+ D G I + + + LG + +EV +++ D ++
Sbjct: 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477
+ A E + F FDK+ + K LR ++ +
Sbjct: 62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGN---GKVMGAELRHVLTTL 106
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 52.7 bits (126), Expect = 2e-09
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-------RLSESEVRQLME 416
+ +E I+G+ +MF I L + + + + + + E
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 417 AADVDGNGTIDYIEFIT 433
D + + ID+ EF++
Sbjct: 60 KKDKNEDKKIDFSEFLS 76
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 52.1 bits (125), Expect = 3e-09
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMF-KSMDTDNSG-TITFEELKAGLPKLGT-----RLSESEVRQLMEAADVD 421
E+ + + F + + ELK L K E + + M D +
Sbjct: 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64
Query: 422 GNGTIDYIEFIT 433
+ +D++E++
Sbjct: 65 KDCEVDFVEYVR 76
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (127), Expect = 3e-09
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + +EI L + FK +D DNSG+++ EE + V+++++ D DG
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL----QQNPLVQRVIDIFDTDG 61
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMR 469
NG +D+ EFI + +E + + + +
Sbjct: 62 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 108
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 49.1 bits (117), Expect = 2e-08
Identities = 9/68 (13%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 369 EEEIMGLKEMF-KSMDTDNSGTI-TFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGT 425
E+ + + +++ K + ++LK L + + + D++ +G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 426 IDYIEFIT 433
+++ EF+
Sbjct: 66 VNFQEFLI 73
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (122), Expect = 2e-08
Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 6/100 (6%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE----VRQLMEAADVD 421
L+++EI+ F + ++ + L E + ++
Sbjct: 10 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTS 69
Query: 422 -GNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNS 459
++ + +F+ ++ + + + AF FD D+
Sbjct: 70 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 109
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 2e-05
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLS---------ESEVRQLMEAADVDGNGTIDY 428
F+ D D+ GT+ E+L + L + + ++E +D+D +GTI+
Sbjct: 100 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 159
Query: 429 IEFITATMHMNRVEREEHLYKAF 451
EF + R +F
Sbjct: 160 SEFQHV------ISRSPDFASSF 176
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.8 bits (121), Expect = 4e-08
Identities = 10/81 (12%), Positives = 21/81 (25%), Gaps = 5/81 (6%)
Query: 381 SMDTDNSGTITFEELKAGLPKLGTRLSES--EVRQLMEAADVDGNGTIDYIEFITATMHM 438
M ++ G I + P R+ + D + + M
Sbjct: 15 KMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYK--SFLM 72
Query: 439 NRVEREEHLYKAFEYFDKDNS 459
+ R E + + F +
Sbjct: 73 SLCPRPE-IDEIFTSYHAKAK 92
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (110), Expect = 3e-07
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++EE+ F+S+ D S I+ K ++LS E+ + E +D D +G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNF--FTKSKLSIPELSYIWELSDADCDGAL 73
Query: 427 DYIEFITATMHM 438
EF A H+
Sbjct: 74 TLPEFCAA-FHL 84
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.2 bits (109), Expect = 4e-07
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
++ ++ ++ N+G + + A L K G + + ++ + AD DG G + EF A
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLP--DLILGKIWDLADTDGKGVLSKQEFFVA- 70
Query: 436 MHM 438
+ +
Sbjct: 71 LRL 73
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 47.3 bits (111), Expect = 4e-07
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L +++I +KE F +D D G ++ E++KA +LG + E+ +++ + G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 427 DYIEFITATMHMNRVEREEHLYKA-FEYFDKDNSTSQWKSWNMRLRSIIWEM 477
++ F++ E + F FD+ + + L + +
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDN 108
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 38.8 bits (89), Expect = 3e-04
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
+ F D + + E +K L +G ++ E+R + A V+G G DY++F
Sbjct: 79 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTA 135
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.4 bits (111), Expect = 6e-07
Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDG 422
A + + L +F+ +D D SG I+ EL+ L T + VR ++ D +
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQKQ 480
+ + + ++ K + +
Sbjct: 70 K--AGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 125
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.7 bits (91), Expect = 2e-04
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437
+F++ D DNSG I ELK L G RLS+ L+ D G G I + +FI +
Sbjct: 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150
Query: 438 MNRVEREEHLYKAFEYFDKDNS 459
+ + L F +D D
Sbjct: 151 L------QRLTDIFRRYDTDQD 166
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.2 bits (108), Expect = 1e-06
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN-------GTID 427
K++F D G I + L L +G + V+ ++ A +
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQKQ 480
IE + + E KAF+ FDK+++ + + + E
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD 116
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
+ + F+ D +++G ++ +L+ L LG +L+++EV +L++ +VD NG IDY
Sbjct: 78 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK 137
Query: 430 EFITATMH 437
+FI +
Sbjct: 138 KFIEDVLR 145
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 44.4 bits (105), Expect = 1e-06
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVD 421
EE + G+ +F + T++ ELK L K ++ + ++ + D +
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 422 GNGTIDYIEFIT 433
+ +D+ EFI+
Sbjct: 64 QDEQVDFQEFIS 75
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A ++++ + L E F+++DTD SG I+ EL A L G S + +L+ D + +
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQKQ 480
G I + EF + + + D++ + + + Q
Sbjct: 69 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQAL 125
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 36.6 bits (83), Expect = 0.003
Identities = 16/82 (19%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437
F+ D+ G + E++A L G ++SE + LM D G++ + +++ ++
Sbjct: 89 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 148
Query: 438 MNRVEREEHLYKAFEYFDKDNS 459
+ R + F ++D++ +
Sbjct: 149 VCR------VRNVFAFYDRERT 164
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 44.1 bits (104), Expect = 1e-06
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 369 EEEIMGLKEMF-KSMDTDNSGTIT----FEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
++ I L +F K + +EL +G++L ++E+ +LME D + +
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 424 GTIDYIEFIT 433
+++ E++T
Sbjct: 65 QEVNFQEYVT 74
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 45.4 bits (106), Expect = 2e-06
Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 3/107 (2%)
Query: 367 LSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQL-MEAADVDGN 423
LS++EI LK++F+ D G + +L LG +V + + +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRL 470
+ + +AF+ FD++ + +
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHV 107
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 43.5 bits (101), Expect = 8e-06
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV--DGNGTIDYIEFITAT 435
FK+ D + G I+ EL+ L LG RLS+ +V ++++ D+ D G + Y +F+
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKV 146
Query: 436 MH 437
M
Sbjct: 147 MA 148
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 43.6 bits (101), Expect = 6e-06
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
+FK +D + G +++EE+KA + K +E ++ + ++ D DGNG ID EF
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 437 HMNRVEREEHLYKAFEYF 454
+ + + +
Sbjct: 64 SIQGQDLSDDKIGLKVLY 81
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 36.6 bits (83), Expect = 0.001
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
++K MD D G +T EE+ + K G +V + + AD +G+G I EF+ ++
Sbjct: 80 LYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEFLEFSL 134
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.6 bits (96), Expect = 4e-05
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
K+ F D +G I + L G + +E+ ++ + + +++ +
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVD-MEQFLQVLNRP 66
Query: 436 MHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477
+ E K F+ FDKD LR ++ +
Sbjct: 67 NGFDMPGDPEEFVKGFQVFDKDA---TGMIGVGELRYVLTSL 105
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.5 bits (88), Expect = 3e-04
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
+ F+ D D +G I EL+ L LG +LS E+ +L++ V +G ++Y +F+
Sbjct: 78 FVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFV 134
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Score = 43.3 bits (101), Expect = 4e-05
Identities = 15/147 (10%), Positives = 47/147 (31%), Gaps = 4/147 (2%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD----DVEDVRREVQIMHHLTGHR 128
+E+G G + + ++ + K + + ++ R E + H
Sbjct: 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV 91
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+ + Y D +M+ + ++ + + +G + ++ + + Y
Sbjct: 92 PHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYA 151
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDF 215
+ + K F++ + F
Sbjct: 152 LEPKVKKQLVKQFTNPELCDITERLVF 178
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 38.0 bits (89), Expect = 5e-05
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG 403
SEEEI +E F+ D D +G I+ EL+ + LG
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 39.3 bits (92), Expect = 7e-05
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ ++ L ++F S + + ELK + L + V ++ME D D
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD 64
Query: 422 GNGTIDYIEFIT 433
G+G D+ EF+
Sbjct: 65 GDGECDFQEFMA 76
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 39.3 bits (92), Expect = 9e-05
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + + ++F S ++ T+T ELK + K L + + V +L++ D +
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN 64
Query: 422 GNGTIDYIEFIT 433
G+ +D+ EFI
Sbjct: 65 GDAQVDFSEFIV 76
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 39.0 bits (91), Expect = 1e-04
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E I L +F+ + N+ I+ E + + + ++M+ D+D
Sbjct: 5 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLD 64
Query: 422 GNGTIDYIEFIT 433
+G +D+ EF+
Sbjct: 65 SDGQLDFQEFLN 76
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 480 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.93 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.63 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.63 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.59 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.58 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.56 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.54 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.52 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.52 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.51 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.51 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.5 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.5 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.5 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.5 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.49 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.49 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.49 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.48 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.47 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.45 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.43 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.42 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.42 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.41 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.41 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.41 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.4 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.4 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.39 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.38 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.37 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.37 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.37 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.36 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.36 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.35 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.35 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.34 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.34 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.34 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.34 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.33 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.33 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.33 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.32 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.3 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.29 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.28 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.25 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.24 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.21 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.21 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.2 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.2 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.2 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.19 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.19 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.18 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.18 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.18 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.16 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.15 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.15 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.14 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.13 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.12 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.11 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.1 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.1 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.1 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.08 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.07 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.07 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.06 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.06 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.05 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.04 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.03 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.02 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.0 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.98 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.97 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.97 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.97 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 98.96 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.96 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.96 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.93 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.93 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 98.92 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.92 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.91 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.89 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 98.89 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 98.89 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 98.88 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.88 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.87 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.86 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.85 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.85 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 98.84 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.83 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.83 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.83 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.8 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.79 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.78 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.77 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.77 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 98.77 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.76 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.76 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.76 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.75 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 98.74 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 98.74 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.74 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.74 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.73 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.7 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.69 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.62 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.61 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.59 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.59 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.52 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.5 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.49 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.47 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.44 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.4 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.39 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.39 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.37 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.37 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.29 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.28 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.28 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.27 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.26 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.18 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.15 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.15 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.13 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.12 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.12 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.08 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.03 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.01 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 97.96 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 97.92 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 97.9 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.88 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 97.76 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 97.75 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 97.71 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.51 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.4 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.37 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.14 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 97.14 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 97.05 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 97.03 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 96.44 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 95.92 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.6 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 95.18 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 94.91 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 89.75 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 86.92 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 86.92 | |
| d1wlma1 | 138 | Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090 | 85.52 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 84.11 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 83.94 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 83.46 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4e-64 Score=480.84 Aligned_cols=289 Identities=42% Similarity=0.742 Sum_probs=235.4
Q ss_pred ccccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 62 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.+++.+.|++++.||+|+||+||+|+++.+++.||||++.+..... ....+.+|+.+|++++ |||||++++++.+++
T Consensus 4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 80 (307)
T d1a06a_ 4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIK-HPNIVALDDIYESGG 80 (307)
T ss_dssp CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCC-CTTBCCEEEEEECSS
T ss_pred CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh--HHHHHHHHHHHHHhCC-CCCCCcEEEEEEECC
Confidence 3567788999999999999999999999999999999997654322 2356889999999998 999999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+|||||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...++++.+||+|||+|+..
T Consensus 81 ~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999999999999999999999999999999999999999999999999999987667889999999999987
Q ss_pred CCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.........+||+.|||||++.+ .++.++|||||||++|+|++|..||.+....+....+......++.+.++.+|+++
T Consensus 161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 240 (307)
T d1a06a_ 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240 (307)
T ss_dssp ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHH
Confidence 66666667889999999999875 58999999999999999999999999999999999999988888877778999999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcccHHHHHHHHhhhhhhH
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (480)
.+||.+||++||++|||++|+|+||||+.... .+..+...+.++++++...++
T Consensus 241 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 293 (307)
T d1a06a_ 241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTA-LDKNIHQSVSEQIKKNFAKSK 293 (307)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCC-CCCCCHHHHHHHHHHHSCCCT
T ss_pred HHHHHHHccCCHhHCcCHHHHhcCHhhCCCCc-cccccchhHHHHHHHHHHHhh
Confidence 99999999999999999999999999985432 233444444455555443333
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-63 Score=462.53 Aligned_cols=255 Identities=33% Similarity=0.622 Sum_probs=231.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++++++ |||||++++++.+++.+|+|
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999997655444455678999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|...... .
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~-~ 160 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS-R 160 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCC-C
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCC-c
Confidence 9999999999999998999999999999999999999999999999999999999 45677999999999876543 3
Q ss_pred cccCCCCcccccccccccc-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....||+.|||||++.+. ++.++|||||||++|+|++|+.||.+.+..+....+.+....++ +.+|+++++||.
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 236 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 236 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHH
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHHH
Confidence 4567899999999999764 89999999999999999999999999999999998888776554 368999999999
Q ss_pred HhcccCcCCCCCHHHHhcCCccccc
Q 011647 306 KMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 306 ~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+||++||++|||++|+|+||||+..
T Consensus 237 ~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHccCCHhHCcCHHHHHcCcCcCCc
Confidence 9999999999999999999999743
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-62 Score=459.50 Aligned_cols=259 Identities=29% Similarity=0.558 Sum_probs=219.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|++++.||+|+||+||+|+++.+|+.||||++..... ....+.+.+|+.++++++ |||||++++++.+++.+||
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~i 80 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYL 80 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCceeEE
Confidence 4579999999999999999999999999999999975432 223467899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+......
T Consensus 81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECEETT
T ss_pred EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEEEccchhheeeccCC
Confidence 999999999999998888899999999999999999999999999999999999994 56779999999998764332
Q ss_pred ---ccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 226 ---VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 226 ---~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.....+||+.|||||++.+. ++.++|||||||++|+|++|++||.................. ...+++.+|+++
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~ 236 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSAP 236 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHHH
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCCHHH
Confidence 23457899999999998653 467899999999999999999999776543333222222222 233456789999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.+||.+||+.||++|||++|+|+||||+...
T Consensus 237 ~~li~~~L~~dP~~R~t~~eil~hpwf~~~l 267 (271)
T d1nvra_ 237 LALLHKILVENPSARITIPDIKKDRWYNKPL 267 (271)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence 9999999999999999999999999998553
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-61 Score=460.81 Aligned_cols=266 Identities=39% Similarity=0.679 Sum_probs=240.6
Q ss_pred cccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCC---hhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN---RDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
+.+.++|.+++.||+|+||+||+|+++.+|+.||||++.+..... ....+.+.+|+.+|++++ |||||++++++.+
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~ 84 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 84 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEE
Confidence 345678999999999999999999999999999999997654322 224678999999999998 9999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC-CCCCeeEeecccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLS 218 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~ikl~Dfg~a 218 (480)
++.+|||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++
T Consensus 85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence 999999999999999999999888999999999999999999999999999999999999997543 2346999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.....+.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...++.+|
T Consensus 165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (293)
T d1jksa_ 165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244 (293)
T ss_dssp EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence 98876666677889999999999975 48999999999999999999999999999999999998888777666667899
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
+++++||.+||+.||++|||++|+|+||||+.
T Consensus 245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 276 (293)
T d1jksa_ 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276 (293)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 99999999999999999999999999999974
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-61 Score=455.37 Aligned_cols=257 Identities=28% Similarity=0.492 Sum_probs=225.1
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|++.+.||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.++++++ |||||++++++.+++.+|+
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i 94 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWV 94 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC---hHHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCEEEE
Confidence 4679999999999999999999999999999999875432 33578999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~- 224 (480)
|||||+||+|.+++.+ +.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.....
T Consensus 95 vmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a~~~~~~~ 170 (293)
T d1yhwa1 95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQ 170 (293)
T ss_dssp EEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSTT
T ss_pred EEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEeeccchhheeecccc
Confidence 9999999999987654 5799999999999999999999999999999999999994 5678999999999986543
Q ss_pred CccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHH
Q 011647 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (480)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (480)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+...... ....++.+|+++++|
T Consensus 171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l 249 (293)
T d1yhwa1 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRDF 249 (293)
T ss_dssp CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHHHHH
T ss_pred ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHHHHH
Confidence 34456789999999999875 4899999999999999999999999988877766666554322 122235789999999
Q ss_pred HHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 304 VKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 304 i~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
|.+||++||++|||+.|+|+||||+...
T Consensus 250 i~~~L~~dP~~R~s~~eil~Hp~~~~~~ 277 (293)
T d1yhwa1 250 LNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (293)
T ss_dssp HHHHTCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHccCChhHCcCHHHHhcCHhhCCCC
Confidence 9999999999999999999999998643
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-61 Score=458.43 Aligned_cols=255 Identities=33% Similarity=0.606 Sum_probs=228.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|++++++++ |||||++++++.+++.+|+|
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCEEEEE
Confidence 56999999999999999999999999999999997655444556688999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ ++++.+||+|||+|+.+....
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 456789999999998765322
Q ss_pred --ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 226 --VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.....+||+.|||||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++ ..+++++++
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 239 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 239 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence 2345689999999999875 589999999999999999999999999999999999988776654 368999999
Q ss_pred HHHHhcccCcCCCCCHHH------HhcCCcccc
Q 011647 303 IVKKMLHADPKERLSAAE------VLNHPWMRV 329 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~------~l~h~~~~~ 329 (480)
||.+||++||++|||++| +++||||+.
T Consensus 240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~ 272 (288)
T d1uu3a_ 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272 (288)
T ss_dssp HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCC
Confidence 999999999999999988 578999974
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.9e-61 Score=467.88 Aligned_cols=263 Identities=35% Similarity=0.626 Sum_probs=238.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.++|.+++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|++++ |||||++++++.+++.+|
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 99 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 99 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEE
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 4568999999999999999999999999999999986542 344578899999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+|||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++|||||||||+|||++. +.++.+||+|||+|+....
T Consensus 100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchheeccc
Confidence 99999999999998854 567999999999999999999999999999999999999964 2357899999999998877
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
........||+.|||||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......++...++.+|+++++
T Consensus 179 ~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 258 (350)
T d1koaa2 179 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 258 (350)
T ss_dssp TSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHH
T ss_pred ccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 666677899999999999875 4889999999999999999999999999999999999988887777777789999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
||.+||+.||++|||++|+|+||||+....
T Consensus 259 li~~~L~~dP~~R~t~~eil~hp~~~~~~~ 288 (350)
T d1koaa2 259 FIRKLLLADPNTRMTIHQALEHPWLTPGNA 288 (350)
T ss_dssp HHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred HHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 999999999999999999999999986544
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=8.9e-61 Score=465.69 Aligned_cols=262 Identities=35% Similarity=0.634 Sum_probs=238.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.+.|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+++. |||||++++++.+++.+|
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ 102 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMV 102 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3467999999999999999999999999999999986542 234567889999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
||||||+||+|.+.+...+ ++++..++.++.||+.||.|||++|||||||||+|||++. ..++.+||+|||+|.....
T Consensus 103 ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEECCT
T ss_pred EEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceecCC
Confidence 9999999999998876554 6999999999999999999999999999999999999964 2457899999999999877
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...++.+|+++.+
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 261 (352)
T d1koba_ 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 261 (352)
T ss_dssp TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred CCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 766777899999999999875 4899999999999999999999999999999999999998888888788899999999
Q ss_pred HHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 303 li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
||.+||++||.+|||+.|+|+||||+...
T Consensus 262 li~~~L~~dp~~R~s~~eil~Hp~~~~~~ 290 (352)
T d1koba_ 262 FIKNLLQKEPRKRLTVHDALEHPWLKGDH 290 (352)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence 99999999999999999999999998653
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-60 Score=447.69 Aligned_cols=253 Identities=22% Similarity=0.430 Sum_probs=219.4
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----CCeEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RHSVN 144 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----~~~~~ 144 (480)
|++.+.||+|+||+||+|.++.+++.||+|.+..... .....+.+.+|+++|++++ |||||++++++.+ ...+|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~~ 88 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV 88 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEEE
Confidence 4788899999999999999999999999999876543 4455678999999999998 9999999999865 45689
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++| |+||||||+|||++ ++++.+||+|||+|+...
T Consensus 89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcceecc
Confidence 99999999999999999899999999999999999999999999 99999999999995 345679999999998644
Q ss_pred CCCccccCCCCccccccccccccCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
. ......+||+.|||||++.+.++.++|||||||++|+|++|+.||.+... ......+..+..+. ......++++.
T Consensus 167 ~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~ 243 (270)
T d1t4ha_ 167 A-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIPEVK 243 (270)
T ss_dssp T-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGGGCCCHHHH
T ss_pred C-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCc--ccCccCCHHHH
Confidence 3 34456789999999999998999999999999999999999999977554 44555555443221 12245789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCccc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~ 328 (480)
+||.+||++||++|||++|+|+||||+
T Consensus 244 ~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999999999999999999999996
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.8e-60 Score=447.40 Aligned_cols=262 Identities=36% Similarity=0.664 Sum_probs=238.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh------hcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR------DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
.++|++.+.||+|+||+||+|+++.+++.||||++.+...... ...+.+.+|+.+++++..||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 4689999999999999999999999999999999976543321 1235688999999999889999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
++.+|||||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999 567789999999999
Q ss_pred ecCCCCccccCCCCccccccccccc-------cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCC
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (480)
...........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+..+...++.+.
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 238 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 238 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence 8876666677889999999998752 367899999999999999999999999999999999998888777777
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
++.+|+++++||.+||++||++|||++|+|+||||+..
T Consensus 239 ~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 239 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 78899999999999999999999999999999999854
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-60 Score=459.44 Aligned_cols=255 Identities=32% Similarity=0.592 Sum_probs=233.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++. ||||+++++++.+++.+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC-CCCEEEEEeeeccccccccc
Confidence 57999999999999999999999999999999998665544556788999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC-CC
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~-~~ 225 (480)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.... ..
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 4567899999999987543 34
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
.....+||+.|+|||++.+ .|+.++|||||||++|||++|.+||.+.+..++...+..+.+.++ ..+|+++++||
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 236 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHH
Confidence 4556789999999999865 599999999999999999999999999999999999988877654 36899999999
Q ss_pred HHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 305 KKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
.+||++||.+|++ ++++++||||+.
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~ 266 (337)
T d1o6la_ 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HhhccCCchhhcccccccHHHHHcCccccc
Confidence 9999999999994 999999999974
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1e-60 Score=457.16 Aligned_cols=257 Identities=26% Similarity=0.439 Sum_probs=228.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|++.+.||+|+||+||+|+++.+++.||||++...........+.+.+|+.++++++ |||||++++++.+++.+|+
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~i 92 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWL 92 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEECCEEEE
Confidence 456999999999999999999999999999999998765555556678999999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||||.+|+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|.....
T Consensus 93 v~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~~Kl~DFG~a~~~~~-- 167 (309)
T d1u5ra_ 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP-- 167 (309)
T ss_dssp EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSSS--
T ss_pred EEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC---CCCCEEEeecccccccCC--
Confidence 999999999988788888999999999999999999999999999999999999994 567799999999986543
Q ss_pred ccccCCCCcccccccccc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
....+||+.|||||++. +.|+.++|||||||++|+|++|..||.+....+.+..+.....+... ...+|+++.
T Consensus 168 -~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~ 244 (309)
T d1u5ra_ 168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--SGHWSEYFR 244 (309)
T ss_dssp -BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS--CTTSCHHHH
T ss_pred -CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCCCHHHH
Confidence 24568999999999985 34789999999999999999999999998888877777766543322 346899999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
+||.+||+.||++|||++++|+||||+...
T Consensus 245 ~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~ 274 (309)
T d1u5ra_ 245 NFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (309)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence 999999999999999999999999998653
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-60 Score=452.96 Aligned_cols=257 Identities=29% Similarity=0.508 Sum_probs=225.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.+.|++++.||+|+||+||+|+++.+++.||||++... .....+.+.+|+++|++++ |||||++++++.+++.+++
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 86 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWI 86 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---SSGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCeEEE
Confidence 35699999999999999999999999999999998654 2344577899999999998 9999999999999999999
Q ss_pred EEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 87 vmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 87 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECHHH
T ss_pred EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEEEEechhhhccCCC
Confidence 9999999999998765 45699999999999999999999999999999999999994 5677999999999765322
Q ss_pred -CccccCCCCcccccccccc------ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 -DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
......+||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+..+.+..+..+..+... ..+.+|
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~s 242 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA-QPSRWS 242 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCS-SGGGSC
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-ccccCC
Confidence 1234578999999999873 34789999999999999999999999998888888888776543322 235789
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+++.+||.+||++||++|||++|+|+||||+..
T Consensus 243 ~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 243 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999999999854
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-60 Score=443.45 Aligned_cols=253 Identities=27% Similarity=0.495 Sum_probs=212.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--CCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~~~~~ 144 (480)
++|++.+.||+|+||+||+|+++.+|+.||||++..... +....+.+.+|++++++++ |||||++++++.+ .+.+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEEE
Confidence 579999999999999999999999999999999976543 4455678999999999998 9999999999864 56689
Q ss_pred EEEecCCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcC-----CeecCCCCcceecccCCCCCCeeEeec
Q 011647 145 LIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDF 215 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~ikl~Df 215 (480)
+|||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++| ||||||||+|||+ +.++.+||+||
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~DF 158 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDF 158 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEECCH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEeec
Confidence 99999999999998854 467999999999999999999999987 9999999999999 45678999999
Q ss_pred ccceecCCCC-ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 216 GLSVFFKPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 216 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
|+|+...... .....+||+.|||||++.+ .++.++|||||||++|+|++|..||.+.+..+....+..+.... ..
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---~~ 235 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IP 235 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CC
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---CC
Confidence 9998765433 3356789999999999865 58999999999999999999999999999988888888765532 22
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcc
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~ 327 (480)
..+|+++.+||.+||+.||++|||++|+|+|||+
T Consensus 236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 4689999999999999999999999999999995
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-59 Score=451.52 Aligned_cols=253 Identities=29% Similarity=0.600 Sum_probs=231.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.++++++ |||||++++++.+++.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCeeeeE
Confidence 56999999999999999999999999999999997654444456788999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
||||.||+|..++.....+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.... .
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~--~ 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--V 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS--C
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEecc--c
Confidence 9999999999999999999999999999999999999999999999999999999 4577899999999998643 3
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
....+||+.|||||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+..+...++ +.+|+++.++|.
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 233 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLS 233 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 346789999999999876 489999999999999999999999999999999999888776554 468999999999
Q ss_pred HhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 306 KMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+||.+||.+|+ |++++|+||||+.
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~Hp~f~~ 262 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKE 262 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred HHhhhCHHhccccchhhHHHHHcCccccc
Confidence 99999999996 9999999999974
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-60 Score=455.84 Aligned_cols=261 Identities=31% Similarity=0.631 Sum_probs=237.5
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
++.++|.+++.||+|+||+||+|.++.+++.||||++.... .....+.+|+++|++++ |||||++++++++++.+
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~ 76 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIAR-HRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEE
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 45678999999999999999999999999999999996542 23456889999999998 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
|||||||+||+|.+++...+ .+++..++.|+.||+.||.|||++||+||||||+|||++. +....+||+|||++....
T Consensus 77 ~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhccc
Confidence 99999999999999997665 7999999999999999999999999999999999999964 245679999999999877
Q ss_pred CCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
.........||+.|+|||.+.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...++.+|++++
T Consensus 156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T d1tkia_ 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence 6666667789999999998865 589999999999999999999999999999999999999888887777778999999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+||.+||..||++|||+.|+|+||||+..
T Consensus 236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 236 DFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 99999999999999999999999999754
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-60 Score=454.80 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=216.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++++.||+|+||+||+|+++.+|+.||+|++.... .....+.+.+|+.+|++++ |||||+++++|.+++.+|
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 80 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEIS 80 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 4578999999999999999999999999999999987542 3344578999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 81 iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHH
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCC
Confidence 999999999999999998999999999999999999999997 599999999999999 4567899999999987543
Q ss_pred CCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH----------------------
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA---------------------- 280 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~---------------------- 280 (480)
. .....+||+.|+|||++.+ .|+.++||||+||++|||++|+.||.+.+.......
T Consensus 158 ~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1s9ja_ 158 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236 (322)
T ss_dssp H-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred C-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence 2 2345789999999999875 599999999999999999999999977553221110
Q ss_pred --------------------HHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 281 --------------------ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 281 --------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
+... ..+..+...+|+++.+||.+||..||++|||++|+|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 237 LSSYGMDSRPPMAIFELLDYIVNE--PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp ---------CCCCHHHHHHHHHTS--CCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred ccccccccccchhHHHHHhhhhcc--CCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 0000 00111112468999999999999999999999999999999853
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-59 Score=454.17 Aligned_cols=266 Identities=33% Similarity=0.646 Sum_probs=225.7
Q ss_pred cccceeecc-eecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe----
Q 011647 65 VRNTYIFGR-ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (480)
Q Consensus 65 ~~~~y~~~~-~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~---- 139 (480)
+.++|.+.. .||+|+||+||+|++..+++.||||++... ..+.+|+.++.++.+|||||+++++|++
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~ 80 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 80 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccC
Confidence 456798875 599999999999999999999999998532 5678999998777669999999999875
Q ss_pred CCeEEEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
...+|+|||||+||+|.+++.+. ..+++..++.|+.||+.||+|||++||+||||||+|||++..+..+.+||+|||+
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~ 160 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 160 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccce
Confidence 46789999999999999999874 3699999999999999999999999999999999999998766778899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HHcCCCcCCCCC
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDP 292 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~----~~~~~~~~~~~~ 292 (480)
|+...........+||+.|||||++.+ .++.++|||||||++|+|+||.+||.+......... +......++...
T Consensus 161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (335)
T d2ozaa1 161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 240 (335)
T ss_dssp CEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTH
T ss_pred eeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc
Confidence 998776666677899999999999876 589999999999999999999999987665444333 333444555545
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCCcc
Q 011647 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (480)
Q Consensus 293 ~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~ 338 (480)
+..+|+++.+||.+||+.||++|||+.|+|+||||+........++
T Consensus 241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~~ 286 (335)
T d2ozaa1 241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286 (335)
T ss_dssp HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCEE
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCCc
Confidence 5578999999999999999999999999999999976554444333
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-59 Score=453.24 Aligned_cols=253 Identities=30% Similarity=0.600 Sum_probs=231.0
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++. |||||++++++.+...+++|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC-CCcEeecccccccccccccc
Confidence 68999999999999999999999999999999997655444556788999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCc
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~ 226 (480)
|||+.||+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~-- 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC--
T ss_pred cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc--
Confidence 9999999999999999999999999999999999999999999999999999999 45678999999999986533
Q ss_pred cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHH
Q 011647 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (480)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (480)
.....||+.|||||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++ ..+|+++.+||.
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 270 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLR 270 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHH
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHHH
Confidence 345789999999999875 489999999999999999999999999999999998888766544 468999999999
Q ss_pred HhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 306 KMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 306 ~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
+||.+||.+|+ |++++++||||+.
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~Hp~f~~ 299 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred HHhhhCHHhccccccccHHHHHcCccccC
Confidence 99999999995 9999999999974
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-58 Score=445.40 Aligned_cols=256 Identities=28% Similarity=0.520 Sum_probs=228.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+.++.+..+|||||++++++.+++.+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 46999999999999999999999999999999997654444455677788888776533499999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-C
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~ 225 (480)
||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++..... .
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 45678999999999865433 3
Q ss_pred ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..++...+..+.+.++ +.+|+++.+||
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 234 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 234 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 3445789999999999875 589999999999999999999999999999999999888766544 36899999999
Q ss_pred HHhcccCcCCCCCHH-HHhcCCcccc
Q 011647 305 KKMLHADPKERLSAA-EVLNHPWMRV 329 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~-~~l~h~~~~~ 329 (480)
.+||.+||.+|||+. ++++||||+.
T Consensus 235 ~~~L~~dP~~R~s~~~~l~~hpff~~ 260 (320)
T d1xjda_ 235 VKLFVREPEKRLGVRGDIRQHPLFRE 260 (320)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred HHhcccCCCCCcCHHHHHHhCchhcc
Confidence 999999999999995 8999999974
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.5e-58 Score=448.90 Aligned_cols=257 Identities=27% Similarity=0.432 Sum_probs=216.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHH---HHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE---VQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e---~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+| +.+++.+. |||||++++++.+++.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEEEECCEE
Confidence 579999999999999999999999999999999975443333333444444 55666666 99999999999999999
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999 4567899999999997654
Q ss_pred CCccccCCCCcccccccccc-c-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 224 GDVFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
. .....+||+.|+|||++. + .++.++|||||||++|+|++|+.||.+......... .......+...+..+|++++
T Consensus 160 ~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~ 237 (364)
T d1omwa3 160 K-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTMAVELPDSFSPELR 237 (364)
T ss_dssp S-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSSSCCCCCCSSSCHHHH
T ss_pred C-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHHHH
Confidence 3 334568999999999985 3 489999999999999999999999987654333222 22222223333457999999
Q ss_pred HHHHHhcccCcCCCCC-----HHHHhcCCcccc
Q 011647 302 DIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t-----~~~~l~h~~~~~ 329 (480)
+||.+||++||++||| ++++++||||+.
T Consensus 238 ~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~ 270 (364)
T d1omwa3 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270 (364)
T ss_dssp HHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred HHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence 9999999999999999 799999999974
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-57 Score=434.37 Aligned_cols=258 Identities=25% Similarity=0.372 Sum_probs=214.4
Q ss_pred ecceecccCCeEEEEEEEcCCCceEEEEEecccccCCh--hcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEe
Q 011647 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR--DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (480)
Q Consensus 71 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 148 (480)
.++.||+|+||+||+|+++.+|+.||||++........ ...+.+.+|+.++++++ |||||++++++.+++.+|+|||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC-CCCEeEEEeeeccCCceeehhh
Confidence 35789999999999999999999999999865433221 12356889999999998 9999999999999999999999
Q ss_pred cCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC-Ccc
Q 011647 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVF 227 (480)
Q Consensus 149 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~-~~~ 227 (480)
||.++++..+....+.+++..++.+++||+.||+|||++||+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~ 157 (299)
T d1ua2a_ 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY 157 (299)
T ss_dssp CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCcccc
Confidence 99988877766667789999999999999999999999999999999999999 45778999999999876443 234
Q ss_pred ccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC--------------
Q 011647 228 KDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD-------------- 291 (480)
Q Consensus 228 ~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~-------------- 291 (480)
...+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+..........
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence 45689999999998753 47999999999999999999999999999888777765421111100
Q ss_pred ----------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCC
Q 011647 292 ----------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (480)
Q Consensus 292 ----------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~ 332 (480)
.++.+++++.+||.+||+.||++|||++|+|+||||+....
T Consensus 238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~ 288 (299)
T d1ua2a_ 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG 288 (299)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence 02356899999999999999999999999999999986544
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-57 Score=426.14 Aligned_cols=252 Identities=31% Similarity=0.555 Sum_probs=215.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChh---cHHHHHHHHHHHHHcc-CCCCeeEEEEEEEeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD---DVEDVRREVQIMHHLT-GHRNIVELKGAYEDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~e~~~l~~l~-~hp~iv~~~~~~~~~~ 141 (480)
.++|++++.||+|+||+||+|++..+|+.||||++.+....... ...++.+|+.+++++. .|||||++++++.+++
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~ 82 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 82 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence 46899999999999999999999999999999999765443322 1234678999999986 4899999999999999
Q ss_pred eEEEEEecCCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.+++||||+.+ +++.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. +++.+||+|||+|+.
T Consensus 83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEE
T ss_pred eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--CCCeEEECcccccee
Confidence 99999999976 678888888889999999999999999999999999999999999999953 346799999999987
Q ss_pred cCCCCccccCCCCcccccccccccc--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 221 FKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
... .......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+. ..+..+...++ +.+|+
T Consensus 161 ~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~----~~~s~ 229 (273)
T d1xwsa_ 161 LKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR----QRVSS 229 (273)
T ss_dssp CCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCS----SCCCH
T ss_pred ccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCC----CCCCH
Confidence 543 344567899999999998643 467899999999999999999999653 23444444433 46899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
++++||.+||++||++|||++|+|+||||+..
T Consensus 230 ~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 99999999999999999999999999999743
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.1e-57 Score=426.74 Aligned_cols=262 Identities=25% Similarity=0.399 Sum_probs=224.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
.+.++|++.+.||+|+||+||+|++..+|+.||||++.+....+....+.+.+|+.++++++ |||||++++++...+
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~ 82 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPA 82 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSS
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC-CCCCCcccceeeeccCC
Confidence 35678999999999999999999999999999999998766656666778999999999998 999999999987654
Q ss_pred --eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 142 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
.+|+|||||+|++|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||++ .++.++|+|||.+.
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---~~~~~~l~d~~~~~ 159 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIAR 159 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTSCEEECCCTTCE
T ss_pred CceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---ccccceeehhhhhh
Confidence 3899999999999999999999999999999999999999999999999999999999994 56679999999987
Q ss_pred ecCCCC----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCC
Q 011647 220 FFKPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (480)
Q Consensus 220 ~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
...... .....+||+.|+|||++.+ .++.++|||||||++|+|+||++||.+.+..+....+.......+...++
T Consensus 160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T d1o6ya_ 160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239 (277)
T ss_dssp ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSS
T ss_pred hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhcc
Confidence 653322 3345689999999999875 48999999999999999999999999999888888887777666666677
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
.+|+++.+||.+||++||++||+..+.|.|+|.+.
T Consensus 240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~ 274 (277)
T d1o6ya_ 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 274 (277)
T ss_dssp SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence 89999999999999999999996666667888764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-56 Score=422.90 Aligned_cols=261 Identities=26% Similarity=0.422 Sum_probs=215.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|.+..+|+.||||++..... .....+.+.+|+++++++. |||||++++++.+++.+|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCC-CCcEEEeccccccccceeEE
Confidence 479999999999999999999999999999999965432 3334578899999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHH-h-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 147 MDLCAGGELFDRII-A-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 147 ~e~~~~~~L~~~l~-~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
||||.++ +.+.+. . .+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 80 ~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 80 FEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp EECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCC
T ss_pred EeecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccCC
Confidence 9999664 444443 3 4569999999999999999999999999999999999999 45678999999999876533
Q ss_pred -CccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCC----------
Q 011647 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD---------- 291 (480)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~---------- 291 (480)
.......||+.|+|||++.. .++.++|||||||++|+|++|+.||.+.+..+.+..+..........
T Consensus 156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (298)
T d1gz8a_ 156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235 (298)
T ss_dssp SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence 33445689999999998653 36889999999999999999999999988777666654321111111
Q ss_pred ---------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCC
Q 011647 292 ---------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (480)
Q Consensus 292 ---------------~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~ 333 (480)
..+.+++++.+||.+||++||++|||+.|+|+||||+.-.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p 292 (298)
T d1gz8a_ 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292 (298)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence 123568999999999999999999999999999999855443
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-55 Score=419.63 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=213.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCC-CceEEEEEecccccCChhcHHHHHHHHHHHHHcc--CCCCeeEEEEEEEe---
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYED--- 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~~~~~~~~--- 139 (480)
.++|++++.||+|+||+||+|++..+ ++.||||++...... ......+.+|+.+++.+. .||||+++++++..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 36899999999999999999999765 667999998754332 222344667888877763 49999999999853
Q ss_pred --CCeEEEEEecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecc
Q 011647 140 --RHSVNLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg 216 (480)
...++++||||.++++..... ....+++..++.++.||+.||+|||++|||||||||+|||+ +..+.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchh
Confidence 357899999998877654443 34569999999999999999999999999999999999999 456789999999
Q ss_pred cceecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcC-------
Q 011647 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF------- 288 (480)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~------- 288 (480)
++.............||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+.+..+.......
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence 9987665555667899999999998854 59999999999999999999999999998887777664321100
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 289 ----------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 289 ----------------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
....+..+++++.+||.+||++||++|||++|+|+||||+.-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i 299 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence 001234678999999999999999999999999999999743
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.2e-55 Score=415.73 Aligned_cols=257 Identities=28% Similarity=0.462 Sum_probs=215.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+.+.||+|+||+||+|+++ +|+.||||++..... .....+.+.+|+.+|++++ |||||++++++..++..+++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCceeEE
Confidence 58999999999999999999986 689999999976432 3334578999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
|||+.++.+..+....+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||.+.......
T Consensus 79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC---
T ss_pred EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCcc
Confidence 9999887777776667889999999999999999999999999999999999999 456789999999998765332
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC--------------
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-------------- 289 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~-------------- 289 (480)
......|++.|+|||.+.+ .++.++|||||||++|||++|+.||.+.+..+.+..+........
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence 2345579999999998853 479999999999999999999999998887777666543111110
Q ss_pred -----------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 290 -----------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 290 -----------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
....+.+++++.+||.+||++||++|||++|+|+||||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 0113457899999999999999999999999999999973
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-55 Score=411.83 Aligned_cols=251 Identities=24% Similarity=0.434 Sum_probs=206.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|.+++.||+|+||+||+|+.+ ..||||++..... +....+.+.+|+.++++++ |||||++++++. ++.++
T Consensus 6 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~-~~~~~ 79 (276)
T d1uwha_ 6 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-APQLA 79 (276)
T ss_dssp CTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCEeeeeEEEe-ccEEE
Confidence 3467999999999999999999864 3599999875433 4456788999999999998 999999999864 56789
Q ss_pred EEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+|||||+||+|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla~~~~~ 156 (276)
T d1uwha_ 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSR 156 (276)
T ss_dssp EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCSCC---
T ss_pred EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccceeeccc
Confidence 999999999999999764 569999999999999999999999999999999999999 4567899999999987543
Q ss_pred C---CccccCCCCccccccccccc----cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHcCCCcCC-CCCCC
Q 011647 224 G---DVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA-ILRGHIDFS-SDPWP 294 (480)
Q Consensus 224 ~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~-~~~~~~~~~-~~~~~ 294 (480)
. .......||+.|||||++.+ .++.++|||||||++|||+||+.||.+.+....... +..+..... .....
T Consensus 157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~ 236 (276)
T d1uwha_ 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236 (276)
T ss_dssp ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCT
T ss_pred cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccc
Confidence 2 23345689999999999853 378899999999999999999999988765544443 333332221 22345
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 295 NISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 295 ~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
.+|+++.+||.+||+.||++|||+.+++++
T Consensus 237 ~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 237 NCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 789999999999999999999999999875
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-54 Score=411.71 Aligned_cols=248 Identities=22% Similarity=0.355 Sum_probs=211.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
..++|++.+.||+|+||+||+|.++.+++.||||++.... ...+.+.+|+.+|++++ |||||++++++.+++.++
T Consensus 15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 89 (287)
T d1opja_ 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 89 (287)
T ss_dssp CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCE
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeE
Confidence 3467999999999999999999999999999999986532 34578999999999998 999999999999999999
Q ss_pred EEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+|||||++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+...
T Consensus 90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~a~~~~ 166 (287)
T d1opja_ 90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT 166 (287)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCCTTTCC
T ss_pred EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccceeecC
Confidence 999999999999998764 568999999999999999999999999999999999999 456789999999998765
Q ss_pred CCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHcCCCcCCCCCCCCCCH
Q 011647 223 PGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPF-WGETEQSIFDAILRGHIDFSSDPWPNISS 298 (480)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (480)
.... .....||+.|+|||++. +.++.++|||||||++|||++|..|| .+.+.......+..+. .. .....+|+
T Consensus 167 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~-~~--~~~~~~~~ 243 (287)
T d1opja_ 167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-RM--ERPEGCPE 243 (287)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CC--CCCTTCCH
T ss_pred CCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC-CC--CCCccchH
Confidence 4332 22345889999999886 56899999999999999999976655 4455555555554432 22 22357899
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 299 ~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
++.+||.+||+.||++|||++++++
T Consensus 244 ~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 244 KVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9999999999999999999999976
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-54 Score=416.86 Aligned_cols=264 Identities=27% Similarity=0.441 Sum_probs=216.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe------
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------ 139 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~------ 139 (480)
.++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|++++ ||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-TTSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHHhc-CCCccceEeeeeccccccc
Confidence 4789999999999999999999999999999999876543 3344577889999999998 9999999998754
Q ss_pred --CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 140 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
++.+|+|||||.++.+.........+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeecce
Confidence 45689999999887776555566789999999999999999999999999999999999999 4567899999999
Q ss_pred ceecCCCC-----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCC
Q 011647 218 SVFFKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (480)
Q Consensus 218 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (480)
+....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+.......+......++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 98654322 2234579999999998753 5899999999999999999999999998887777666553333222
Q ss_pred CCCCC----------------------------CCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCC
Q 011647 291 DPWPN----------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (480)
Q Consensus 291 ~~~~~----------------------------~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~ 334 (480)
..+.. .++++.+||.+||++||++|||++|+|+||||+....++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p~ 315 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 315 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCCC
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCCC
Confidence 22111 267889999999999999999999999999999654444
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-55 Score=410.30 Aligned_cols=247 Identities=22% Similarity=0.351 Sum_probs=208.0
Q ss_pred ceecccCCeEEEEEEEc--CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEEEecC
Q 011647 73 RELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (480)
Q Consensus 73 ~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 150 (480)
++||+|+||+||+|.+. .+++.||||++.... .+....+.+.+|+.+|++++ |||||++++++.. +..+||||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~-~~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEES-SSEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCC-CCCCceEEEEecc-CCEEEEEEcC
Confidence 47999999999999864 456789999986543 23445678999999999998 9999999999865 4578999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCCcc---
Q 011647 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (480)
Q Consensus 151 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~~--- 227 (480)
++|+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||++ .++.+||+|||+++........
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~---~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc---ccCcccccchhhhhhcccccccccc
Confidence 9999999999989999999999999999999999999999999999999995 4677999999999876543321
Q ss_pred -ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHH
Q 011647 228 -KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (480)
Q Consensus 228 -~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (480)
....||+.|||||++. +.++.++|||||||++|||+| |..||.+.+..++...+..+... +....+|+++.+||
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li 243 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM 243 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHH
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHHHHHH
Confidence 2357899999999886 458999999999999999997 89999998888888887765432 12246899999999
Q ss_pred HHhcccCcCCCCCHHHH---hcCCccc
Q 011647 305 KKMLHADPKERLSAAEV---LNHPWMR 328 (480)
Q Consensus 305 ~~~L~~dp~~R~t~~~~---l~h~~~~ 328 (480)
.+||+.||++|||++++ |+|+|+.
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~~~ 270 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYYYD 270 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence 99999999999999998 4666654
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.1e-54 Score=412.21 Aligned_cols=250 Identities=23% Similarity=0.388 Sum_probs=204.4
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCc---eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.+.|++.+.||+|+||+||+|.++.+++ .||||.+.... .....+.+.+|+++|++++ |||||++++++.+++.
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~ 101 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTP 101 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCE
Confidence 4679999999999999999999987664 58888875432 3455678999999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+++|||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++++||+|||+++..
T Consensus 102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 178 (299)
T d1jpaa_ 102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFL 178 (299)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEc
Confidence 99999999999999988764 569999999999999999999999999999999999999 55778999999999876
Q ss_pred CCCCcc------ccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCC
Q 011647 222 KPGDVF------KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (480)
Q Consensus 222 ~~~~~~------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
...... ....||+.|||||++. +.++.++|||||||++|||+| |..||.+....+....+..+... +..
T Consensus 179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~---~~~ 255 (299)
T d1jpaa_ 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL---PPP 255 (299)
T ss_dssp -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CCC
T ss_pred cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCC
Confidence 543221 2245789999999986 458999999999999999998 89999999988888887765322 223
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 294 ~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
..+|+++.+||.+||+.||++|||+.+++++
T Consensus 256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 5789999999999999999999999999763
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=419.40 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=211.4
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCc-----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQ-----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+++.||+|+||+||+|++..+++ .||+|.+.... .......+.+|+.++.++.+|||||++++++.+
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~ 112 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 112 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee
Confidence 34689999999999999999999876543 69999886543 233446789999999999559999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCC
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAK-----------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKP 196 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~-----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp 196 (480)
.+.+++|||||++|+|.+++... +.+++..++.++.||+.||.|||++|||||||||
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp 192 (325)
T d1rjba_ 113 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 192 (325)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCch
Confidence 99999999999999999999754 2489999999999999999999999999999999
Q ss_pred cceecccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCC
Q 011647 197 ENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWG 271 (480)
Q Consensus 197 ~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~ 271 (480)
+|||++ .++.+||+|||+|+....... .....||+.|||||++. +.++.++|||||||++|||+| |..||.+
T Consensus 193 ~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~ 269 (325)
T d1rjba_ 193 RNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 269 (325)
T ss_dssp GGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hccccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCC
Confidence 999994 567899999999987654332 23456899999999886 568999999999999999997 8999988
Q ss_pred CChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
......+..+......++. ...+|+++.+||.+||+.||++|||++||++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 270 IPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7766555555555443332 35789999999999999999999999999975
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-54 Score=420.57 Aligned_cols=254 Identities=29% Similarity=0.434 Sum_probs=210.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe------C
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------R 140 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~------~ 140 (480)
.+|..++.||+|+||+||+|+++.+|+.||||++..... ...+|+.+|++++ ||||++++++|.. .
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~ 91 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDE 91 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSC
T ss_pred CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcC-CCCCCcEEEEEEecCccCCc
Confidence 369999999999999999999999999999999975432 2347999999998 9999999999853 3
Q ss_pred CeEEEEEecCCCCchHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 141 HSVNLIMDLCAGGELFDR---IIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 141 ~~~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.++++|||||+++.+... ......+++..++.+++||+.||+|||++||+||||||+|||++. ++..+||+|||+
T Consensus 92 ~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~--~~~~~kl~DFG~ 169 (350)
T d1q5ka_ 92 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGS 169 (350)
T ss_dssp CEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TTCCEEECCCTT
T ss_pred eEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--CCCceeEecccc
Confidence 458999999976543332 234567999999999999999999999999999999999999953 234799999999
Q ss_pred ceecCCCCccccCCCCcccccccccc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcC-----------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG----------- 284 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~----------- 284 (480)
+............+||+.|+|||.+. ..++.++||||+||++|||++|..||...+..+.+..+.+.
T Consensus 170 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp CEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred hhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence 99877666667789999999999764 35899999999999999999999999988877666655321
Q ss_pred ------CCcCC--------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 285 ------HIDFS--------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 285 ------~~~~~--------~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
...++ ....+.+++++.+||.+||..||++|||+.|+|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 00111 11134578999999999999999999999999999999754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-54 Score=407.53 Aligned_cols=256 Identities=25% Similarity=0.378 Sum_probs=215.6
Q ss_pred ccceeecc-eecccCCeEEEEEEEcC--CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 66 RNTYIFGR-ELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 66 ~~~y~~~~-~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
.++|.+.+ +||+|+||+||+|.++. ++..||||++... ......+.+.+|+++|++++ |||||++++++.+ +.
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~-~~ 82 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EA 82 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SS
T ss_pred ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh--cCHHHHHHHHHHHHHHHhCC-CCCEeeEeeeecc-Ce
Confidence 35677777 49999999999998764 3557999998643 24455688999999999998 9999999999865 56
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
+|+|||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKAL 159 (285)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec---cCCceeeccchhhhcc
Confidence 89999999999999987654 5799999999999999999999999999999999999995 4667999999999976
Q ss_pred CCCCc----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 222 KPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... .....||+.|+|||++. +.++.++|||||||++|||+| |..||.+....++...+..+... ...+.
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~ 236 (285)
T d1u59a_ 160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 236 (285)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTT
T ss_pred cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCc
Confidence 54332 22456899999999986 458999999999999999998 99999998888888888776432 12357
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHH---hcCCcccccC
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEV---LNHPWMRVDG 331 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~---l~h~~~~~~~ 331 (480)
+|+++.+||.+||+.||++|||+.++ |+|+|+....
T Consensus 237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~ 275 (285)
T d1u59a_ 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 275 (285)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999888 5788876443
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-54 Score=402.99 Aligned_cols=246 Identities=24% Similarity=0.440 Sum_probs=203.1
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|.+++.||+|+||+||+|.+.. ++.||||++.... ...+.+.+|++++++++ |||||++++++.+++.+++|
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA----MSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETT-TEEEEEEECCSSS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECC-CCEEEEEEECCCc----CcHHHHHHHHHHHHhcC-CCCcccccceeccCCceEEE
Confidence 469999999999999999999874 6789999986532 23467999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++......
T Consensus 79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC---------
T ss_pred EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCC
Confidence 9999999999988755 568999999999999999999999999999999999999 456789999999998765432
Q ss_pred c--cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 V--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
. .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||......+....+..+..... ....++++.
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~ 232 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHVY 232 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC---CTTSCHHHH
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC---ccccCHHHH
Confidence 2 234578999999999874 58999999999999999999 5777777777778887776543222 246789999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+||.+||+.||++|||++++++|
T Consensus 233 ~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 233 QIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999875
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-54 Score=405.80 Aligned_cols=252 Identities=19% Similarity=0.330 Sum_probs=213.6
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
...++|++++.||+|+||+||+|.++ +++.||||++.... ...+.+.+|+.++++++ |||||++++++. ++.+
T Consensus 10 i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~-~~~~ 82 (272)
T d1qpca_ 10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQ-HQRLVRLYAVVT-QEPI 82 (272)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSSC
T ss_pred cCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----CCHHHHHHHHHHHHhCC-CCCEeEEEeeec-cCCe
Confidence 34578999999999999999999986 46789999986532 23467999999999998 999999999875 4567
Q ss_pred EEEEecCCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 144 NLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
++|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ ++++.+||+|||+|+..
T Consensus 83 ~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~ 159 (272)
T d1qpca_ 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLI 159 (272)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEc
Confidence 9999999999998876533 359999999999999999999999999999999999999 56778999999999987
Q ss_pred CCCCc--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 222 KPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 222 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
..... .....||+.|||||++. +.++.++|||||||++|||+|| .+||......+....+..+.... ....+|
T Consensus 160 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~---~p~~~~ 236 (272)
T d1qpca_ 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV---RPDNCP 236 (272)
T ss_dssp SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCC
T ss_pred cCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---CcccCh
Confidence 54432 23457899999999986 4589999999999999999995 56667777777777776653322 224789
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhc--CCccc
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLN--HPWMR 328 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~--h~~~~ 328 (480)
+++.+||.+||+.||++|||+.++++ |+||.
T Consensus 237 ~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 237 EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 99999999999999999999999998 78875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=6e-54 Score=415.85 Aligned_cols=253 Identities=26% Similarity=0.528 Sum_probs=211.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe--CCeE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSV 143 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~--~~~~ 143 (480)
.++|++++.||+|+||+||+|+++.+|+.||||++... ..+.+.+|+.+|+++.+||||+++++++.. ...+
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 46899999999999999999999999999999998643 346789999999999779999999999974 4569
Q ss_pred EEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
++|||||.+++|... .+.+++..++.++.||+.||.|||++|||||||||+|||++. ++..+||+|||+|.....
T Consensus 108 ~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 108 ALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHP 182 (328)
T ss_dssp EEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCGGGCEECCT
T ss_pred eEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCeeeecccccceeccC
Confidence 999999999999765 357999999999999999999999999999999999999963 344699999999998877
Q ss_pred CCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHc-------------CCCc
Q 011647 224 GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILR-------------GHID 287 (480)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~-------------~~~~ 287 (480)
.......+||+.|+|||++.+ .++.++||||+||++|+|++|..||...... .....+.. ....
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 262 (328)
T d3bqca1 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262 (328)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence 666677889999999998754 4799999999999999999999999765432 22111110 0000
Q ss_pred --------------------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccc
Q 011647 288 --------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (480)
Q Consensus 288 --------------------~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~ 329 (480)
........+++++.+||.+||++||++|||++|+|+||||+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~ 324 (328)
T d3bqca1 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324 (328)
T ss_dssp CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 011122347899999999999999999999999999999974
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-53 Score=397.99 Aligned_cols=246 Identities=24% Similarity=0.411 Sum_probs=215.5
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|+++ +++.||||++++... ..+.+.+|+.++++++ ||||+++++++.+++.+++|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~~~iv 77 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFII 77 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTCC-CTTBCCEEEEECCSSSEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEE
Confidence 46899999999999999999985 678999999875432 3467999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC
Q 011647 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~ 225 (480)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~ 154 (258)
T d1k2pa_ 78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE 154 (258)
T ss_dssp EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSS
T ss_pred EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCC
Confidence 999999999988665 4569999999999999999999999999999999999999 457789999999998765433
Q ss_pred c--cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHH
Q 011647 226 V--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (480)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (480)
. .....||+.|+|||++. ..++.++|||||||++|||+| |+.||.+.+..+....+..+.... .....++++.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~ 231 (258)
T d1k2pa_ 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVY 231 (258)
T ss_dssp CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHH
T ss_pred ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC---CcccccHHHH
Confidence 2 23457899999999986 458999999999999999998 899999999988888887754322 2246889999
Q ss_pred HHHHHhcccCcCCCCCHHHHhcC
Q 011647 302 DIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 302 ~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+||.+||+.||++|||++++++|
T Consensus 232 ~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 232 TIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999987
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-54 Score=417.78 Aligned_cols=259 Identities=27% Similarity=0.444 Sum_probs=212.4
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
.+.++|++++.||+|+||+||+|.++.+|+.||||++.... .+....+.+.+|+++|+++. |||||+++++|...+
T Consensus 15 ~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpniv~l~~~~~~~~~~ 92 (346)
T d1cm8a_ 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETL 92 (346)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSST
T ss_pred ecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcC-CCCeeEEEEEeccCccc
Confidence 36789999999999999999999999999999999997533 34455678999999999998 999999999997655
Q ss_pred ----eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccc
Q 011647 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (480)
Q Consensus 142 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~ 217 (480)
.+|+||||| +.+|...+ ..+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+
T Consensus 93 ~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 93 DDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL 167 (346)
T ss_dssp TTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred cccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---ccccccccccccc
Confidence 579999999 66776654 55689999999999999999999999999999999999999 5677899999999
Q ss_pred ceecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC---------
Q 011647 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------- 286 (480)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~--------- 286 (480)
|+.... .....+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+....+..+.....
T Consensus 168 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1cm8a_ 168 ARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 245 (346)
T ss_dssp CEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred eeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhh
Confidence 987643 3456789999999998854 478999999999999999999999998877665544332111
Q ss_pred --------------cCCC----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 287 --------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 287 --------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
.... ...+.+++++.+||.+||..||.+|||+.|+|+||||+.-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 246 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 1111 12346789999999999999999999999999999998543
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-54 Score=415.42 Aligned_cols=261 Identities=29% Similarity=0.518 Sum_probs=219.0
Q ss_pred ccceeecceecccCCeEEEEEEEc---CCCceEEEEEecccccC-ChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
.++|++++.||+|+||+||+|++. .+|+.||||++.+.... +....+.+.+|+++++++++||||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 367999999999999999999974 46899999998754332 22335678899999999985699999999999999
Q ss_pred eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.+++||||+.+|+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||++ .++.+||+|||+++.+
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCCEEEeeccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999999994 5678999999999876
Q ss_pred CCCC--ccccCCCCccccccccccc---cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGD--VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
.... ......|++.|+|||.+.+ .++.++|||||||+||+|++|..||.+.........+..............+
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 259 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTS
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccC
Confidence 4322 2345679999999998853 3688999999999999999999999876654444444333322233333478
Q ss_pred CHHHHHHHHHhcccCcCCCC-----CHHHHhcCCcccc
Q 011647 297 SSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~-----t~~~~l~h~~~~~ 329 (480)
|+++.+||.+||.+||.+|| |++|+|+||||+.
T Consensus 260 s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~ 297 (322)
T d1vzoa_ 260 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297 (322)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred CHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence 99999999999999999999 5899999999974
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-53 Score=415.04 Aligned_cols=265 Identities=29% Similarity=0.473 Sum_probs=212.8
Q ss_pred ccccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
++..+|++++.||+|+||+||+|.++.+|+.||||++.+.. .....+.+.+|+.+|++++ ||||+++++++....
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~ 81 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIE 81 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTT
T ss_pred CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeecccc
Confidence 35578999999999999999999999999999999996533 3445678899999999998 999999999986543
Q ss_pred --eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 142 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
..+++++|+.||+|.+++.. +.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~~~~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a~ 157 (345)
T d1pmea_ 82 QMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLAR 157 (345)
T ss_dssp TCCCEEEEEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred ccceEEEEEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCcee
Confidence 23344455668999998865 479999999999999999999999999999999999999 456789999999998
Q ss_pred ecCCCC----ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCc------
Q 011647 220 FFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------ 287 (480)
Q Consensus 220 ~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~------ 287 (480)
...... .....+||+.|+|||++.. .++.++||||+||++|+|++|+.||.+................
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
T d1pmea_ 158 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237 (345)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred eccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhh
Confidence 754322 2345679999999998743 4789999999999999999999999887765544443211000
Q ss_pred --------------CC---C----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCC
Q 011647 288 --------------FS---S----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (480)
Q Consensus 288 --------------~~---~----~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~ 335 (480)
.+ . ..++.+++++.+||.+||+.||.+|||+.|+|+||||+......+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~ 306 (345)
T d1pmea_ 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 306 (345)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCcc
Confidence 00 0 113567899999999999999999999999999999986655443
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-53 Score=401.66 Aligned_cols=259 Identities=25% Similarity=0.457 Sum_probs=219.3
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 146 (480)
++|++++.||+|+||+||+|++..+++.||||+++.... .....+++.+|+.++++++ ||||+++++++.+....++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhcC-cCCEEeeccccccccceeEE
Confidence 579999999999999999999999999999999965442 4445688999999999998 99999999999999999999
Q ss_pred EecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCCC-
Q 011647 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (480)
Q Consensus 147 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~- 225 (480)
++++.+++|..++...+.+++..++.++.|++.||+|||++|||||||||+|||++ .++.+||+|||.+.......
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSCCS
T ss_pred eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc---cCCceeeeecchhhcccCCCc
Confidence 99999999998888888999999999999999999999999999999999999994 46679999999999865433
Q ss_pred ccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHcCCCcC--------------
Q 011647 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFW-GETEQSIFDAILRGHIDF-------------- 288 (480)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~-~~~~~~~~~~~~~~~~~~-------------- 288 (480)
......+++.|+|||++.+ .++.++|||||||++|+|++|+.||. +.+..+....+.......
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence 3344567889999998764 37899999999999999999999864 444555555443211110
Q ss_pred -----------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCccccc
Q 011647 289 -----------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (480)
Q Consensus 289 -----------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~ 330 (480)
.....+.+++.+.+||.+||++||.+|||++|+|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~ 289 (292)
T d1unla_ 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred cccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence 111234678999999999999999999999999999999754
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-53 Score=411.45 Aligned_cols=264 Identities=27% Similarity=0.411 Sum_probs=215.7
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeC----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~---- 140 (480)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+.. .+....+.+.+|+.+|+++. |||||++++++...
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~~~ 93 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLE 93 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSTT
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeccccc
Confidence 4578999999999999999999999999999999997543 34455678899999999998 99999999998633
Q ss_pred -CeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccce
Q 011647 141 -HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (480)
Q Consensus 141 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~ 219 (480)
...++||+|+.||+|.+++. .+++++..++.++.||+.||+|||++||+||||||+|||+ +.++.+|++|||++.
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~a~ 169 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLAR 169 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC----
T ss_pred cCceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccchhc
Confidence 33456667778999998774 4679999999999999999999999999999999999999 456789999999997
Q ss_pred ecCCCCccccCCCCccccccccccc--cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCCcCC--------
Q 011647 220 FFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-------- 289 (480)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~-------- 289 (480)
... .......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+.......+........
T Consensus 170 ~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 247 (348)
T d2gfsa1 170 HTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247 (348)
T ss_dssp CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCC
T ss_pred ccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhcc
Confidence 643 33455789999999998654 368999999999999999999999999887766666543221111
Q ss_pred ---------------CC----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccCCCCCC
Q 011647 290 ---------------SD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336 (480)
Q Consensus 290 ---------------~~----~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~~~~~~ 336 (480)
.. .+..+++++.+||.+||+.||.+|||+.|+|+||||+...++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~ 313 (348)
T d2gfsa1 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313 (348)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSC
T ss_pred chhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccC
Confidence 00 124678999999999999999999999999999999876554443
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-52 Score=394.46 Aligned_cols=250 Identities=26% Similarity=0.373 Sum_probs=203.1
Q ss_pred cccceeecceecccCCeEEEEEEEcCCC---ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCC
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~ 141 (480)
..++|++++.||+|+||+||+|.+..++ ..||||.+... ......+.+.+|+.++++++ |||||++++++. ++
T Consensus 5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~~ 80 (273)
T d1mp8a_ 5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-EN 80 (273)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-SS
T ss_pred CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe-cC
Confidence 3468999999999999999999987543 46888887543 24445678999999999998 999999999985 56
Q ss_pred eEEEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 142 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.+++|||||++|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||+|+.
T Consensus 81 ~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~---~~~~~Kl~DfG~a~~ 157 (273)
T d1mp8a_ 81 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRY 157 (273)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC------
T ss_pred eEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec---CCCcEEEccchhhee
Confidence 78999999999999988765 45699999999999999999999999999999999999995 456799999999987
Q ss_pred cCCCC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 221 FKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 221 ~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... ......||+.|+|||++. +.++.++|||||||++|||++ |.+||.+....+....+..+... +.++.+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~ 234 (273)
T d1mp8a_ 158 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNC 234 (273)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTC
T ss_pred ccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCC
Confidence 64332 223457899999999986 468999999999999999998 89999999988888888776432 234578
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
|+++.+||.+||+.||++|||+.++++|
T Consensus 235 ~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 235 PPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999999999999999999999999864
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-53 Score=413.00 Aligned_cols=259 Identities=28% Similarity=0.416 Sum_probs=203.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-----
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----- 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~----- 139 (480)
+.++|++++.||+|+||+||+|+++.+|+.||||++.... .+.....++.+|+.+++++. |||||+++++|..
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~ 92 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLE 92 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccc
Confidence 4478999999999999999999999999999999997543 34556678999999999997 9999999999953
Q ss_pred -CCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccc
Q 011647 140 -RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (480)
Q Consensus 140 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a 218 (480)
...+|+|||||.++ +.+.+ .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~~-l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~---~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC-
T ss_pred cCceeEEEEeccchH-HHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---cccceeeechhhh
Confidence 46899999999664 44544 45799999999999999999999999999999999999994 5677999999999
Q ss_pred eecCCCCccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHcCCC-----------
Q 011647 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------- 286 (480)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~----------- 286 (480)
+...........+||+.|+|||++.+ .+++++||||+||++|+|++|++||.+.+.......+.....
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (355)
T d2b1pa1 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence 88776666677789999999999865 589999999999999999999999998877665555432111
Q ss_pred -----------cCCCCC----------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHhcCCcccccC
Q 011647 287 -----------DFSSDP----------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (480)
Q Consensus 287 -----------~~~~~~----------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h~~~~~~~ 331 (480)
...... ....++++.+||.+||..||++|||++|+|+||||+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~ 318 (355)
T d2b1pa1 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318 (355)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 110000 011357789999999999999999999999999998643
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-52 Score=392.48 Aligned_cols=248 Identities=21% Similarity=0.365 Sum_probs=202.4
Q ss_pred cceeecceecccCCeEEEEEEEcCCC----ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
+.|.+.+.||+|+||+||+|.++.++ ..||||++.... .......+.+|+.++++++ |||||++++++.+.+.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCc
Confidence 46899999999999999999987654 469999986432 3444567899999999998 9999999999999999
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++|||||.++++.+.+... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----
T ss_pred eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhcc
Confidence 99999999999998877654 579999999999999999999999999999999999999 45778999999999876
Q ss_pred CCCC----ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHcCCCcCCCCCCCC
Q 011647 222 KPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (480)
Q Consensus 222 ~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
.... ......||+.|||||++.+ .++.++|||||||++|||++| .+|+......+....+..+... +....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~ 237 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL---PTPMD 237 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CCCTT
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC---CCchh
Confidence 4332 1233568999999998864 589999999999999999995 5556666777777776665322 22346
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 296 ~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
+++++.+||.+||+.||++|||+.++++
T Consensus 238 ~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 238 CPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 8999999999999999999999999976
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-52 Score=390.98 Aligned_cols=252 Identities=22% Similarity=0.377 Sum_probs=207.9
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
.++|++++.||+|+||+||+|+++.+ +.||||++.... ...+.+.+|+.++++++ |||||++++++.+ +.+++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~----~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~-~~~~l 88 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 88 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECccc----CCHHHHHHHHHHHHhcc-cCCEeEEEEEEec-CCeEE
Confidence 46799999999999999999999765 579999986433 23477999999999998 9999999999854 56789
Q ss_pred EEecCCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 146 IMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
|||||++|+|..++.. .+.+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++....
T Consensus 89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~---~~~~~kl~DfGla~~~~~ 165 (285)
T d1fmka3 89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIED 165 (285)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC----
T ss_pred EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC---CCCcEEEcccchhhhccC
Confidence 9999999999888754 45799999999999999999999999999999999999994 567899999999987643
Q ss_pred CC--ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHH
Q 011647 224 GD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (480)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (480)
.. ......||+.|+|||++. +.++.++|||||||++|||++| .+|+.+....+.+..+..+... +..+.+|++
T Consensus 166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~ 242 (285)
T d1fmka3 166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---PCPPECPES 242 (285)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTSCHH
T ss_pred CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---CCCcccCHH
Confidence 33 223457999999999886 4689999999999999999995 5556667777777777665321 223578999
Q ss_pred HHHHHHHhcccCcCCCCCHHHHhc--CCccccc
Q 011647 300 AKDIVKKMLHADPKERLSAAEVLN--HPWMRVD 330 (480)
Q Consensus 300 ~~~li~~~L~~dp~~R~t~~~~l~--h~~~~~~ 330 (480)
+.+||.+||+.||++|||++++++ |+||+..
T Consensus 243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 999999999999999999999998 8899754
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-52 Score=399.03 Aligned_cols=250 Identities=26% Similarity=0.358 Sum_probs=209.7
Q ss_pred cceeecceecccCCeEEEEEEEcCCCce--EEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
++|++.+.||+|+||+||+|.++.++.. ||||.+... ......+.+.+|+++|.++.+|||||++++++.+++.++
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc--cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 5799999999999999999999988765 667766432 233445779999999999955999999999999999999
Q ss_pred EEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC
Q 011647 145 LIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
+|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCCC
Confidence 999999999999998643 569999999999999999999999999999999999999 4567
Q ss_pred CeeEeecccceecCCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHcCCC
Q 011647 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGV-PPFWGETEQSIFDAILRGHI 286 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~-~pf~~~~~~~~~~~~~~~~~ 286 (480)
.+||+|||+++............||+.|+|||.+. +.++.++|||||||++|||++|. +||.+.+..++...+..+..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~ 244 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence 79999999998765444444567999999999986 45899999999999999999965 67888888888887766532
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
...+..+++++.+||.+||+.||++|||+.++++|
T Consensus 245 ---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 245 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp ---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 22335789999999999999999999999999986
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-52 Score=395.05 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=199.4
Q ss_pred cccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|++++.||+|+||+||+|.+.. +++.||||++.... .....+.+.+|+.++.++.+||||+.+++++..
T Consensus 11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~ 88 (299)
T d1ywna1 11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 88 (299)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc
Confidence 34689999999999999999999754 34689999986432 334457788899999998779999999998765
Q ss_pred -CCeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecc
Q 011647 140 -RHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (480)
Q Consensus 140 -~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 202 (480)
+..+++|||||++|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 89 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl- 167 (299)
T d1ywna1 89 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL- 167 (299)
T ss_dssp TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-
T ss_pred CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE-
Confidence 45689999999999999998653 248999999999999999999999999999999999999
Q ss_pred cCCCCCCeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHH
Q 011647 203 SSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSG-VPPFWGETEQSI 277 (480)
Q Consensus 203 ~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~ 277 (480)
+.++.+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|||++| .+||.+......
T Consensus 168 --~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~ 245 (299)
T d1ywna1 168 --SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 245 (299)
T ss_dssp --CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred --CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 456789999999998654332 2334679999999998864 589999999999999999986 567877654443
Q ss_pred H-HHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 278 F-DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 278 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+ ..+..+. .++ ....+++++.+||.+||+.||++|||++|+++|
T Consensus 246 ~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 246 FCRRLKEGT-RMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHHTC-CCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCC-CCC--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 3 4444432 222 234689999999999999999999999999986
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-52 Score=389.82 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=203.1
Q ss_pred cceeecceecccCCeEEEEEEEcCC-C--ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDT-K--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~-~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~ 143 (480)
++|++.+.||+|+||+||+|++..+ + ..||||++.+.........+.+.+|+.++++++ |||||++++++.+ +..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEee-cch
Confidence 5699999999999999999987533 3 368999987765555566788999999999998 9999999999965 567
Q ss_pred EEEEecCCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 144 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
++|||||++++|.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++...
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~---~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc---ccceeeccchhhhhcc
Confidence 899999999999987765 456999999999999999999999999999999999999954 5679999999999865
Q ss_pred CCCc----cccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 223 PGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 223 ~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
.... .....|+..|+|||++.+ .++.++|||||||++|||+| |..||.+.+..+....+......++. .+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~ 240 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PEDC 240 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTTC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC--cccc
Confidence 4332 223467889999999865 48899999999999999998 89999999999988888776554433 3578
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
|+++.+||.+||..||++|||++++++
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999999963
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=397.26 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=205.2
Q ss_pred cceeecceecccCCeEEEEEEEcCCCc----eEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCe
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~ 142 (480)
..|++++.||+|+||+||+|.+..+|+ .||+|.+... ......+.+.+|+.++++++ |||||++++++.++ .
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~-~ 84 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 84 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-S
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-C
Confidence 459999999999999999999988776 4788877533 23345678999999999998 99999999999765 5
Q ss_pred EEEEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceec
Q 011647 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (480)
Q Consensus 143 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~ 221 (480)
.++++||+.+++|.+.+... ..+++..+..++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+..
T Consensus 85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~---~~~~~kl~DFGla~~~ 161 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 161 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCCSHHHHT
T ss_pred eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC---CCCCeEeeccccceec
Confidence 67888999999998877764 5799999999999999999999999999999999999995 4667999999999876
Q ss_pred CCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCC
Q 011647 222 KPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (480)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
..... .....||+.|+|||++. +.++.++|||||||++|||+| |.+||.+.+..++...+..+... +..+.+
T Consensus 162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~---~~p~~~ 238 (317)
T d1xkka_ 162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPIC 238 (317)
T ss_dssp TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC---CCCTTB
T ss_pred ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccc
Confidence 54332 23346899999999886 458999999999999999998 89999988888777777665432 122468
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 297 ~~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
++++.+||.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 239 TIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 9999999999999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.9e-51 Score=391.57 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=214.8
Q ss_pred cccccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 63 EDVRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 63 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
+..+++|.+++.||+|+||+||+|+++. +++.||||++.... .....+.+.+|+.++++++ ||||+++++++
T Consensus 9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~ 85 (301)
T d1lufa_ 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVC 85 (301)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcC-CCCcccceeee
Confidence 3456789999999999999999999763 46789999986432 3445678999999999998 99999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecC
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAKG------------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRD 193 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~~------------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D 193 (480)
.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++||||||
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD 165 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 165 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence 99999999999999999999886532 388999999999999999999999999999
Q ss_pred CCCcceecccCCCCCCeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCC-CC
Q 011647 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGV-PP 268 (480)
Q Consensus 194 lkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~-~p 268 (480)
|||+|||++ .++.+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|||++|. +|
T Consensus 166 lKp~NILld---~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p 242 (301)
T d1lufa_ 166 LATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242 (301)
T ss_dssp CSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred EcccceEEC---CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence 999999994 56789999999998654322 2334678999999998865 5899999999999999999985 68
Q ss_pred CCCCChHHHHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
|.+....+....+..+.... ....+|+++.+||.+||+.||++|||+.||++
T Consensus 243 ~~~~~~~e~~~~v~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 243 YYGMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp TTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999988888887765422 23478999999999999999999999999964
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-51 Score=388.32 Aligned_cols=251 Identities=26% Similarity=0.441 Sum_probs=210.3
Q ss_pred cccceeecceecccCCeEEEEEEEcCCC-------ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTK-------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~ 137 (480)
..++|.+++.||+|+||.||+|++..++ ..||||++.... .......+.+|+..+.++.+|||||++++++
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~ 88 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 88 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence 3578999999999999999999976554 479999986533 3445677899999999996699999999999
Q ss_pred EeCCeEEEEEecCCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 138 EDRHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 138 ~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
.+++.+++|||||++|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 89 ~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl 168 (299)
T d1fgka_ 89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168 (299)
T ss_dssp CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee
Confidence 9999999999999999999999754 358999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCC---ccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+.++.+||+|||+++...... ......||+.|+|||++. +.++.++|||||||++|||++ |.+||.+.....
T Consensus 169 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~ 245 (299)
T d1fgka_ 169 ---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245 (299)
T ss_dssp ---CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred ---cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH
Confidence 456789999999998765432 233467899999999885 569999999999999999998 799999888888
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
....+..+... + ....+|+++.+||.+||+.||++|||+.|+++
T Consensus 246 ~~~~i~~~~~~-~--~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 246 LFKLLKEGHRM-D--KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHHTTCCC-C--CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHcCCCC-C--CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 88777665322 2 23468999999999999999999999999976
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-51 Score=382.03 Aligned_cols=242 Identities=23% Similarity=0.382 Sum_probs=200.5
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE-eCCeEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE-DRHSVN 144 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~-~~~~~~ 144 (480)
.++|++++.||+|+||.||+|.++ |..||||+++.. ...+.+.+|++++++++ ||||+++++++. ..+.++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~ 77 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLY 77 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCE
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-----HHHHHHHHHHHHHHhCC-CCCEeeEEEEEEecCCcEE
Confidence 357999999999999999999985 678999998643 23477999999999998 999999999885 456789
Q ss_pred EEEecCCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecC
Q 011647 145 LIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~ 222 (480)
+||||+++|+|.+++...+ .+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++...
T Consensus 78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~ 154 (262)
T d1byga_ 78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS 154 (262)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecC
Confidence 9999999999999986543 48999999999999999999999999999999999999 557789999999998754
Q ss_pred CCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHcCCCcCCCCCCCCCCHHH
Q 011647 223 PGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (480)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (480)
.. .....+|+.|+|||++. +.++.++|||||||++|||+| |.+||...+..+....+..+... +..+.+++++
T Consensus 155 ~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~ 229 (262)
T d1byga_ 155 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPAV 229 (262)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC---CCCTTCCHHH
T ss_pred CC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccCCHHH
Confidence 32 34457899999999885 568999999999999999998 79999988888888887665322 1234688999
Q ss_pred HHHHHHhcccCcCCCCCHHHHhc
Q 011647 301 KDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 301 ~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+||.+||..||.+|||+.++++
T Consensus 230 ~~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 230 YEVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcccCHhHCcCHHHHHH
Confidence 99999999999999999999976
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-50 Score=385.81 Aligned_cols=260 Identities=22% Similarity=0.296 Sum_probs=207.5
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.++|++++.||+|+||+||+|++..+|+.||||++..... .+.+.+|+++++.+.+|++|+.+..++.+.+..+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ 79 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence 45689999999999999999999999999999999865432 1347889999999986666778888888999999
Q ss_pred EEEecCCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCC
Q 011647 145 LIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~ 223 (480)
+||||+ +++|.+.+. ..+.+++..+..++.|++.||+|||++|||||||||+|||++..+.+..+||+|||+|+....
T Consensus 80 ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 80 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred EEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 999999 456655554 456799999999999999999999999999999999999997666778899999999998654
Q ss_pred CC--------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---HcCCCcCC-C
Q 011647 224 GD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI---LRGHIDFS-S 290 (480)
Q Consensus 224 ~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~---~~~~~~~~-~ 290 (480)
.. ......||+.|||||++.+ .++.++|||||||++|||++|..||...........+ .......+ .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh
Confidence 32 2235689999999999876 4899999999999999999999999876544332222 11111111 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHH---HhcCCccccc
Q 011647 291 DPWPNISSSAKDIVKKMLHADPKERLSAAE---VLNHPWMRVD 330 (480)
Q Consensus 291 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~~---~l~h~~~~~~ 330 (480)
...+.+|+++.++|.+||+.||++||++.+ +|+|+|.+..
T Consensus 239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~ 281 (299)
T d1ckia_ 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281 (299)
T ss_dssp HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence 123578999999999999999999999875 4677776543
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-50 Score=383.72 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=211.1
Q ss_pred cccceeecceecccCCeEEEEEEEc-----CCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~ 139 (480)
..++|.+++.||+|+||+||+|++. .+++.||||++.... .......+.+|+.+++++.+|||||++++++.+
T Consensus 21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~ 98 (311)
T d1t46a_ 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (311)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee
Confidence 3478999999999999999999863 456789999997543 344556789999999999669999999999999
Q ss_pred CCeEEEEEecCCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceec
Q 011647 140 RHSVNLIMDLCAGGELFDRIIAKG------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (480)
Q Consensus 140 ~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 201 (480)
...+++|||||++|+|.+++.... .+++..+..++.||+.||.|||++|||||||||+||++
T Consensus 99 ~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~ 178 (311)
T d1t46a_ 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178 (311)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc
Confidence 999999999999999999987543 58999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeEeecccceecCCCCc---cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011647 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (480)
Q Consensus 202 ~~~~~~~~ikl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 276 (480)
+ ..+.+||+|||+++....... .....||+.|+|||++. +.++.++|||||||++|||+| |.+||.+....+
T Consensus 179 ~---~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~ 255 (311)
T d1t46a_ 179 T---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (311)
T ss_dssp E---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred c---ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH
Confidence 4 567799999999987654322 23457899999999886 458999999999999999998 666676666655
Q ss_pred HHHHHHcCCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.+..+......... ...+|+++.+||.+||+.||++|||++++++
T Consensus 256 ~~~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 256 KFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 55444443332222 2468999999999999999999999999986
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-50 Score=383.14 Aligned_cols=256 Identities=22% Similarity=0.358 Sum_probs=218.1
Q ss_pred ccccceeecceecccCCeEEEEEEEcC-----CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEE
Q 011647 64 DVRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (480)
Q Consensus 64 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~ 138 (480)
...++|.+++.||+|+||+||+|.++. ++..||||++.... .......+.+|+.+++++. |||||++++++.
T Consensus 17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~ 93 (308)
T d1p4oa_ 17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVS 93 (308)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEEEEC
T ss_pred ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcC-CCCEeeeeeEEe
Confidence 345789999999999999999998853 35789999986432 4445567899999999998 999999999999
Q ss_pred eCCeEEEEEecCCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCC
Q 011647 139 DRHSVNLIMDLCAGGELFDRIIAK----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (480)
Q Consensus 139 ~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 208 (480)
.++..++|||||++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||+ +.++
T Consensus 94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~~ 170 (308)
T d1p4oa_ 94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDF 170 (308)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTC
T ss_pred cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCCc
Confidence 999999999999999999988643 247899999999999999999999999999999999999 5677
Q ss_pred CeeEeecccceecCCCC---ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHc
Q 011647 209 PLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILR 283 (480)
Q Consensus 209 ~ikl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~ 283 (480)
++||+|||+++...... ......||+.|+|||.+.+ .++.++||||||+++|||+|| .+||.+.+..+.+..+..
T Consensus 171 ~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~ 250 (308)
T d1p4oa_ 171 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250 (308)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred eEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence 89999999998654332 2234468999999999864 588899999999999999998 588988888888888877
Q ss_pred CCCcCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc------CCccc
Q 011647 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN------HPWMR 328 (480)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~------h~~~~ 328 (480)
+.... ..+.+|+.+.++|.+||+.||++|||+.++++ +|+|+
T Consensus 251 ~~~~~---~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~ 298 (308)
T d1p4oa_ 251 GGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 298 (308)
T ss_dssp TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred CCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCc
Confidence 65422 22578999999999999999999999999997 66665
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-49 Score=375.23 Aligned_cols=246 Identities=23% Similarity=0.332 Sum_probs=200.6
Q ss_pred eecceecccCCeEEEEEEEcCCC---ceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEe-CCeEEE
Q 011647 70 IFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSVNL 145 (480)
Q Consensus 70 ~~~~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 145 (480)
.+.+.||+|+||+||+|.+..++ ..||||++.. ..+....+.+.+|+++|++++ ||||+++++++.. ++.+++
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l 106 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLV 106 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECC--CCCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc--ccCHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEE
Confidence 34678999999999999986543 3689999863 235556788999999999998 9999999998765 568999
Q ss_pred EEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEeecccceecCCC
Q 011647 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (480)
Q Consensus 146 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~~~~~ 224 (480)
|||||++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||+ ++++.+||+|||+++.....
T Consensus 107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDK 183 (311)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTT
T ss_pred EEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhcccc
Confidence 99999999999988754 457888999999999999999999999999999999999 45778999999999876543
Q ss_pred Cc-----cccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHcCCCcCCCCCCCCCC
Q 011647 225 DV-----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDPWPNIS 297 (480)
Q Consensus 225 ~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.. .....||+.|+|||.+. +.++.++||||||+++|||++|..||... +..+....+..+.... ..+.++
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~---~p~~~~ 260 (311)
T d1r0pa_ 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL---QPEYCP 260 (311)
T ss_dssp TCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC---CCTTCC
T ss_pred ccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CcccCc
Confidence 21 22356899999999876 56899999999999999999977777554 3444555555554322 124678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHhcC
Q 011647 298 SSAKDIVKKMLHADPKERLSAAEVLNH 324 (480)
Q Consensus 298 ~~~~~li~~~L~~dp~~R~t~~~~l~h 324 (480)
+++.+||.+||+.||++|||+.|+++|
T Consensus 261 ~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 261 DPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3.1e-48 Score=368.84 Aligned_cols=253 Identities=22% Similarity=0.282 Sum_probs=207.2
Q ss_pred cccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 65 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
+.++|++++.||+|+||+||+|++..+|+.||||++..... ...+.+|++.++.+.+|+|++.+++++......+
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 45789999999999999999999999999999998864322 2347789999999987799999999999999999
Q ss_pred EEEecCCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCC--CCCCeeEeecccceec
Q 011647 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFF 221 (480)
Q Consensus 145 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~ikl~Dfg~a~~~ 221 (480)
+||||+ +++|.+++... +.+++..+..++.|++.||+|||++||+||||||+|||++... ..+.+||+|||+|+..
T Consensus 78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 999999 78998888765 4699999999999999999999999999999999999996432 3567999999999876
Q ss_pred CCCC--------ccccCCCCccccccccccc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHcCCCcCC
Q 011647 222 KPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFS 289 (480)
Q Consensus 222 ~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~ 289 (480)
.... .....+||+.|||||++.+ .++.++|||||||++|+|++|..||.+... ......+.......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 236 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence 4321 2335689999999999875 489999999999999999999999976443 233333322211111
Q ss_pred -CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 290 -SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 290 -~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
....+.+|+++.+++..|+..+|++||+.+.+.+
T Consensus 237 ~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 1122468899999999999999999998876643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-47 Score=365.99 Aligned_cols=245 Identities=22% Similarity=0.293 Sum_probs=188.6
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHH--HHHHHHHHccCCCCeeEEEEEEEeCC--
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVELKGAYEDRH-- 141 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~--~e~~~l~~l~~hp~iv~~~~~~~~~~-- 141 (480)
..+|.+.+.||+|+||+||+|++ +|+.||||++.... .+... +|+..+.+++ |||||++++++.+.+
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~ 72 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGT 72 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSS
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc------hhHHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCc
Confidence 35789999999999999999987 57899999985432 23333 4455555666 999999999987654
Q ss_pred --eEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------cCCeecCCCCcceecccCCCCCCee
Q 011647 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------MGVMHRDLKPENFLFSSSAEDSPLK 211 (480)
Q Consensus 142 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~--------~~ivH~Dlkp~Nil~~~~~~~~~ik 211 (480)
.+++|||||++|+|.+++.+. .+++..+..++.|++.||.|||+ +|||||||||+|||| +.++.+|
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~K 148 (303)
T d1vjya_ 73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEE
T ss_pred ceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeE
Confidence 689999999999999999764 69999999999999999999996 599999999999999 5677899
Q ss_pred EeecccceecCCCC-----ccccCCCCcccccccccccc-------CCCchhHHHHHHHHHHHHhCCCCCCCCC------
Q 011647 212 ATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSGVPPFWGET------ 273 (480)
Q Consensus 212 l~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~~lltg~~pf~~~~------ 273 (480)
|+|||+++...... .....+||+.|+|||++.+. ++.++|||||||+||||+||..||....
T Consensus 149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~ 228 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence 99999998765432 22346899999999998643 4668999999999999999988764321
Q ss_pred ---------hHHHHHHHHcCCCcCCCC-CC--CCCCHHHHHHHHHhcccCcCCCCCHHHHhc
Q 011647 274 ---------EQSIFDAILRGHIDFSSD-PW--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (480)
Q Consensus 274 ---------~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 323 (480)
.................+ .+ ...+..+.+|+.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 122222232222211110 00 112345889999999999999999999976
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.4e-45 Score=358.50 Aligned_cols=258 Identities=24% Similarity=0.456 Sum_probs=194.9
Q ss_pred cceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHcc----------CCCCeeEEEEE
Q 011647 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT----------GHRNIVELKGA 136 (480)
Q Consensus 67 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~----------~hp~iv~~~~~ 136 (480)
++|++++.||+|+||+||+|+++.+|+.||||++.+.. ...+.+.+|+.+++.+. +|+||++++++
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 46999999999999999999999999999999997532 23467788999888875 26889999988
Q ss_pred EEe--CCeEEEEEecCCCCchHHH-HH--hcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCcceecccCCCC---
Q 011647 137 YED--RHSVNLIMDLCAGGELFDR-II--AKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAED--- 207 (480)
Q Consensus 137 ~~~--~~~~~lv~e~~~~~~L~~~-l~--~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~--- 207 (480)
+.. ....+++|+++..+..... .. ....+++..++.++.||+.||.|||+ .||+||||||+|||++..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence 753 4566777777655443322 22 34579999999999999999999998 899999999999999643321
Q ss_pred CCeeEeecccceecCCCCccccCCCCcccccccccc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCChH------HHHHH
Q 011647 208 SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ------SIFDA 280 (480)
Q Consensus 208 ~~ikl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~------~~~~~ 280 (480)
..++|+|||.+..... .....+||+.|+|||++. ..++.++||||+||++++|++|+.||...... .....
T Consensus 169 ~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~ 246 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246 (362)
T ss_dssp EEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred ceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence 2489999999986543 335568999999999876 45899999999999999999999999754321 11111
Q ss_pred HHc--CC------------------C----cC--------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHh
Q 011647 281 ILR--GH------------------I----DF--------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322 (480)
Q Consensus 281 ~~~--~~------------------~----~~--------------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 322 (480)
... +. . .. ........++++.+||.+||..||.+|||++|+|
T Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L 326 (362)
T d1q8ya_ 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326 (362)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 100 00 0 00 0001123467899999999999999999999999
Q ss_pred cCCccccc
Q 011647 323 NHPWMRVD 330 (480)
Q Consensus 323 ~h~~~~~~ 330 (480)
+||||+..
T Consensus 327 ~Hp~f~~~ 334 (362)
T d1q8ya_ 327 NHPWLKDT 334 (362)
T ss_dssp TCGGGTTC
T ss_pred cCcccCCC
Confidence 99999843
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=4.7e-27 Score=207.69 Aligned_cols=167 Identities=18% Similarity=0.172 Sum_probs=123.6
Q ss_pred eeecceecccCCeEEEEEEEcCCCceEEEEEecccccC-----C----------hhcHHHHHHHHHHHHHccCCCCeeEE
Q 011647 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----N----------RDDVEDVRREVQIMHHLTGHRNIVEL 133 (480)
Q Consensus 69 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~----------~~~~~~~~~e~~~l~~l~~hp~iv~~ 133 (480)
+.+++.||+|+||+||+|.+. +|+.||||+++..... . ........+|...+.++. |++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence 568899999999999999985 5899999987532110 0 011233567888999998 9999998
Q ss_pred EEEEEeCCeEEEEEecCCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCcceecccCCCCCCeeEe
Q 011647 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (480)
Q Consensus 134 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ikl~ 213 (480)
+++. . .++||||+++..+.+ ++...+..++.|++.+|.|||++||+||||||+|||++. ..++|+
T Consensus 80 ~~~~--~--~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~----~~~~li 144 (191)
T d1zara2 80 YAWE--G--NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE----EGIWII 144 (191)
T ss_dssp EEEE--T--TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET----TEEEEC
T ss_pred EEec--C--CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC----CCEEEE
Confidence 8763 2 379999998866533 556667889999999999999999999999999999952 338999
Q ss_pred ecccceecCCCCccccCCCCccccc------cccccccCCCchhHHHHHHHH
Q 011647 214 DFGLSVFFKPGDVFKDLVGSAYYVA------PEVLRRNYGAEADIWSAGVIL 259 (480)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DiwslG~il 259 (480)
|||+|........ ..|.. .+.+.+.|+.++|+||+.--+
T Consensus 145 DFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 9999987543221 11221 133456789999999976433
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.63 E-value=2.5e-16 Score=131.63 Aligned_cols=110 Identities=34% Similarity=0.511 Sum_probs=100.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc-cccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-VERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-~~~~ 444 (480)
+++++++++++++|..+|.+++|.|+.+||..++...+..++...+..++..+|.+++|.|+|+||+.++..... ....
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 578899999999999999999999999999999999999999999999999999999999999999998765332 3456
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|.|++|+|+.+|++.+...++
T Consensus 82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 112 (146)
T d1exra_ 82 EELIEAFKVFDRDGNGLISAAELRHVMTNLG 112 (146)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence 7899999999999999999999998887654
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.63 E-value=2.6e-16 Score=130.78 Aligned_cols=105 Identities=22% Similarity=0.412 Sum_probs=94.4
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccHH
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREE 445 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~~ 445 (480)
++++++++++++|..||.+++|.|+..||..+|+.+|..++..++..++. +++|.|+|++|+.++.. .....+++
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~ 76 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE 76 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence 46889999999999999999999999999999999999999999988874 56899999999998764 44456688
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+..+|+.||+|++|+|+.+|++++...++
T Consensus 77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 106 (142)
T d1wdcb_ 77 TIRNAFAMFDEQETKKLNIEYIKDLLENMG 106 (142)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSS
T ss_pred hHHHhhhhhcccCCCcccHHHHHHHHHHcc
Confidence 999999999999999999999999887764
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.59 E-value=2e-15 Score=126.01 Aligned_cols=111 Identities=35% Similarity=0.488 Sum_probs=101.3
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-ccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~ 443 (480)
++++++++..++++|+.||.|++|.|+.+||..++...|..++...+..++..++.++++.++|++|...+... ....+
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999987653 33456
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
++.+..+|+.||+|++|+|+.+|++.++..++
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g 113 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 78899999999999999999999999887765
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.58 E-value=8.2e-16 Score=129.27 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=94.5
Q ss_pred hhHHHHhhHHHhhcccCC--CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc--ccc
Q 011647 367 LSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN--RVE 442 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~--~~~ 442 (480)
++++++++++++|..||. +++|.|+..||..+|+.+|..+++.++..+. ..+.+++|.|+|+||+.++.... ...
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~ 79 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence 467889999999999994 8999999999999999999999999998764 45788899999999999876532 345
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+++..+|+.||+|++|+|+.+|+++++..++
T Consensus 80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g 112 (152)
T d1wdcc_ 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALG 112 (152)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSS
T ss_pred HHHhhhhhhhccccccCccchHHHHHHHHHHcC
Confidence 678899999999999999999999999987653
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.56 E-value=1.6e-15 Score=126.38 Aligned_cols=104 Identities=15% Similarity=0.213 Sum_probs=91.4
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCC--CCcceeHHHHHHHHcccc---ccccHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNGTIDYIEFITATMHMN---RVEREEH 446 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~I~~~eF~~~~~~~~---~~~~~~~ 446 (480)
.++++++|..||.|++|.|+.+||..+|+.+|..++..++..++..++.+ ++|.|+|+||+.++.... .....+.
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 35689999999999999999999999999999999999999999888655 688999999999875432 2345678
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+..+|+.+|+|++|+|+.+|+++++..++
T Consensus 83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g 111 (145)
T d2mysc_ 83 FVEGLRVFDKEGNGTVMGAELRHVLATLG 111 (145)
T ss_pred HHHHHHHhhcCCCCEEcHHHHHHHHHHhC
Confidence 99999999999999999999999988765
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.54 E-value=8.2e-15 Score=121.14 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=88.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc---ccccHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---RVEREEHLYK 449 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~---~~~~~~~~~~ 449 (480)
..++++|..||.+++|.|+..||..+|+.+|.+++.+++..+ +.+++|.|+|++|+.++.... .....+++..
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 678999999999999999999999999999999999887654 678899999999999886432 2345678999
Q ss_pred HHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+|+.+|+|++|+|+.+|+++++..++.
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~ 107 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTSLGE 107 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHS
T ss_pred HHHHHhccCCCcchHHHHHHHHHHcCC
Confidence 999999999999999999999988764
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.52 E-value=8.6e-15 Score=120.04 Aligned_cols=98 Identities=23% Similarity=0.321 Sum_probs=87.5
Q ss_pred HHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc---ccHHHHHHHHH
Q 011647 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV---EREEHLYKAFE 452 (480)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~---~~~~~~~~~F~ 452 (480)
..+|+.+|.|+||.|+..||..++..++...+.++++.+|..+|.|++|.|+|+||+.++...... .....+..+|+
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~ 82 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK 82 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 578999999999999999999999999999999999999999999999999999999987654332 33567899999
Q ss_pred HhcCCCCCceehhhhHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+|.|++|+|+.+|++.+...
T Consensus 83 ~~D~~~~g~i~~~el~~~~~~ 103 (134)
T d1jfja_ 83 LMDVDGDGKLTKEEVTSFFKK 103 (134)
T ss_dssp HHCCSSSSEEEHHHHHHHHTT
T ss_pred ccccccCCcccHHHHHHHHHh
Confidence 999999999999999877543
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.6e-14 Score=119.56 Aligned_cols=108 Identities=26% Similarity=0.467 Sum_probs=96.5
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-cccccHHH
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVEREEH 446 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~~~~ 446 (480)
++++.++++++|..+|.|++|.|+..||..+++..|..++...+..++..+|.+++|.|+|.||+..+... ......+.
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 80 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999987543 23345678
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+..+|+.+|.+++|.|+..++..+...++
T Consensus 81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g 109 (141)
T d2obha1 81 ILKAFKLFDDDETGKISFKNLKRVAKELG 109 (141)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHhcccCCCCccHHHHHHHHHHhC
Confidence 99999999999999999999988877654
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.51 E-value=1.4e-14 Score=123.03 Aligned_cols=110 Identities=30% Similarity=0.406 Sum_probs=97.1
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc----cc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NR 440 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~----~~ 440 (480)
..++++++.+++++|..+|.+++|.|+..||..++...+..++...+..++..+|.+++|.|+|.||+..+... ..
T Consensus 12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~ 91 (162)
T d1topa_ 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAK 91 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcc
Confidence 45788899999999999999999999999999999999999999999999999999999999999998875432 22
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
....+.+..+|+.+|.|++|+|+.+|++++....
T Consensus 92 ~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~ 125 (162)
T d1topa_ 92 GKSEEELANCFRIFDKNADGFIDIEELGEILRAT 125 (162)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhh
Confidence 2345678899999999999999999998877654
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.51 E-value=1.1e-14 Score=106.61 Aligned_cols=73 Identities=42% Similarity=0.641 Sum_probs=69.8
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.+++++++.+++++|..||.|++|+|+..||+.+|+.+|..++..++..++..+|.|++|.|+|+||+.++..
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999999999998754
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.50 E-value=8.3e-15 Score=121.97 Aligned_cols=107 Identities=24% Similarity=0.354 Sum_probs=91.0
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc-ccccccHH
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREE 445 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~-~~~~~~~~ 445 (480)
|+++++.+++++|..+|.+++|.|+.+||..+|+.+|..++..+ ++..++.+++|.|+|++|+.++.. .......+
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 77 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGADPED 77 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccchHH
Confidence 57889999999999999999999999999999999997655443 344556678899999999998755 44455677
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
.+..+|+.||+|++|+|+.+|+++++..++.
T Consensus 78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~ 108 (145)
T d2mysb_ 78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGG 108 (145)
T ss_pred HHHHHHHhhhhcccchhhHHHHHHHHHHcCC
Confidence 8999999999999999999999999887764
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.50 E-value=2.6e-15 Score=130.12 Aligned_cols=109 Identities=59% Similarity=0.831 Sum_probs=96.3
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
.+++++++.+++++|+.+|.|++|+|+.+||..+++.++..++..+++.++..+|.+++|.|+|++|+.+..........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 46788889999999999999999999999999999999999999999999999999999999999999987665555556
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+.+..+|+.+|.+++|+|+..+++++...
T Consensus 82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~ 110 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSGYITLDEIQQACKD 110 (182)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTT
T ss_pred HHHHHHHHHHhhcCCCccchhhhhhhhhh
Confidence 67888888888888888888888766543
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.7e-14 Score=121.60 Aligned_cols=109 Identities=26% Similarity=0.427 Sum_probs=93.8
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-cc
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RV 441 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~ 441 (480)
|..+++++++..++++|+.+|.|++|.|+.+||..++.....+ .++.+|..+|.+++|.|+|+||+.++.... ..
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~----~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~ 81 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 81 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCT----THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCH----HHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence 5678999999999999999999999999999999876554332 467789999999999999999999887654 34
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
...+.+..+|+.+|.|++|+|+.+|+.++.+...
T Consensus 82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~ 115 (165)
T d1auib_ 82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV 115 (165)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccccccccHHHHHHHHHHhc
Confidence 5567899999999999999999999998876653
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.50 E-value=2.1e-14 Score=106.06 Aligned_cols=69 Identities=33% Similarity=0.579 Sum_probs=64.8
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+++++..++++|+.||.|++|.|+..||+.+|+.+| .++..++..+|..+|.|++|.|+|+||+.++..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 467889999999999999999999999999999999 589999999999999999999999999998754
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.49 E-value=1.5e-14 Score=104.63 Aligned_cols=71 Identities=42% Similarity=0.686 Sum_probs=68.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+++++++.+++++|+.||.+++|+|+..||..+++.+|..++.+++..++..+|.|++|.|+|+||+.++.
T Consensus 1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999864
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=3.8e-14 Score=123.50 Aligned_cols=110 Identities=23% Similarity=0.337 Sum_probs=94.0
Q ss_pred HHHHhhHHHhhcccCCC-CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHH
Q 011647 369 EEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 447 (480)
.....+++++|+.|+.+ ++|.|+.+||.+++...+...+...++.+|..+|.|++|.|+|.||+.++........++.+
T Consensus 17 ~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~ 96 (189)
T d1jbaa_ 17 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 96 (189)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred ccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHH
Confidence 33344455555555544 58999999999999999999999999999999999999999999999998876666778889
Q ss_pred HHHHHHhcCCCCCceehhhhHHHHHHHHHHh
Q 011647 448 YKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQ 478 (480)
Q Consensus 448 ~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~~ 478 (480)
+.+|+.||.|++|.|+.+|+..+...++.+.
T Consensus 97 ~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~ 127 (189)
T d1jbaa_ 97 KWTFKIYDKDRNGCIDRQELLDIVESIYKLK 127 (189)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhccCCCCcccHhHHHHHHHHHHHhh
Confidence 9999999999999999999999988776653
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.49 E-value=2.4e-14 Score=120.69 Aligned_cols=113 Identities=25% Similarity=0.340 Sum_probs=96.6
Q ss_pred HhhhhhHHHHhhHHHhhcccCCCC-CCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc----
Q 011647 363 IAENLSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH---- 437 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~---- 437 (480)
..++++++++++++++|..||.++ ||.|+..||..+|+.+|..++..++..++..++.+++|.+++.+|......
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 83 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence 456789999999999999999995 899999999999999999999999999999999999999999999876432
Q ss_pred ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 438 MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 438 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
......++.+..+|+.||.|++|+|+.+|++++...++
T Consensus 84 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~ 121 (156)
T d1dtla_ 84 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121 (156)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-
T ss_pred cccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcC
Confidence 22345667899999999999999999999988765543
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.48 E-value=2.6e-14 Score=105.45 Aligned_cols=76 Identities=28% Similarity=0.487 Sum_probs=71.1
Q ss_pred HHhhhhhHHHHhhHHHhhcccCCCC-CCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 362 VIAENLSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 362 ~~~~~~~~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
....+++++++..++++|..||.++ +|.|+..||+.+|+.+|..++..+++.++..+|.|++|.|+|+||+.++.+
T Consensus 4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 4557899999999999999999995 899999999999999999999999999999999999999999999998753
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.47 E-value=3.3e-14 Score=104.96 Aligned_cols=73 Identities=36% Similarity=0.567 Sum_probs=69.2
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
..++++++.+++++|..||.|++|+|+..||+.+|+.+|..+++.+++.++..+|.|++|.|+|+||+.++..
T Consensus 6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998753
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.45 E-value=3.7e-14 Score=122.72 Aligned_cols=95 Identities=24% Similarity=0.285 Sum_probs=77.1
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
++++++|+.+|.|++|.|+.+||..+|+.+|..++..+++.++..+|.|++|+|+|+||...+... ..+..+|+
T Consensus 18 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~------~~~~~~F~ 91 (182)
T d1y1xa_ 18 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFR 91 (182)
T ss_dssp SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccc------cccccchh
Confidence 579999999999999999999999999999999999999999999999999999999998865322 24555566
Q ss_pred HhcCCCCCceehhhhHHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+|.|++|+|+.+|++++...
T Consensus 92 ~~D~~~~g~I~~~el~~~l~~ 112 (182)
T d1y1xa_ 92 KRDSSGDGRLDSNEVRAALLS 112 (182)
T ss_dssp HHCTTSSSCBCHHHHHHHHHT
T ss_pred ccccccchhhhhHHHHHHHHH
Confidence 666666666666665555443
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.4e-14 Score=119.73 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=86.3
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcC--CCCcceeHHHHHHHHcccc---ccccHHHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV--DGNGTIDYIEFITATMHMN---RVEREEHLY 448 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~I~~~eF~~~~~~~~---~~~~~~~~~ 448 (480)
+++++|..||.+++|.|+.+||..+|+.+|..++..++..++..++. +++|.|+|.+|..++.... .....+++.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 36899999999999999999999999999999999999999887763 6789999999999865322 233456789
Q ss_pred HHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+|+.+|+|++|+|+.+|++++...++
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~~g 107 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTTLG 107 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHHSS
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHHhC
Confidence 999999999999999999999988765
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.42 E-value=3.6e-13 Score=116.50 Aligned_cols=111 Identities=20% Similarity=0.253 Sum_probs=95.9
Q ss_pred hhhhHHHHhhHHHhhcccCCC--CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-cc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RV 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-~~ 441 (480)
..|+.+++..|++.|..+|.+ ++|.|+.+||..++...+.... ..++.+|..+|.|++|.|+|+||+.++.... ..
T Consensus 9 t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~ 87 (183)
T d2zfda1 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 87 (183)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhccC
Confidence 578999999999999999876 6999999999999988776655 4678999999999999999999999875543 34
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
..++.++.+|+.+|.|++|.|+.+|++.+...+..
T Consensus 88 ~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~ 122 (183)
T d2zfda1 88 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA 122 (183)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHH
T ss_pred cHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHh
Confidence 56778999999999999999999999998776543
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.42 E-value=1.3e-14 Score=108.59 Aligned_cols=75 Identities=68% Similarity=0.993 Sum_probs=70.5
Q ss_pred HHHhhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
..|...++++++..++++|..||.+++|.|+..||+.+|+.+|..+++.+++.++..+|.|++|.|+|+||+.++
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 456678888999999999999999999999999999999999999999999999999999999999999999765
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.41 E-value=2.7e-13 Score=117.08 Aligned_cols=98 Identities=22% Similarity=0.231 Sum_probs=85.6
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~ 450 (480)
.+.+.++|+.+|.|++|+|+.+||..+|+.++.. .+..+++.++..+|.|++|.|+|+||+.++... ..+..+
T Consensus 18 ~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~~ 91 (181)
T d1hqva_ 18 QSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNV 91 (181)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------cccccc
Confidence 4668899999999999999999999999998754 688999999999999999999999999987543 357788
Q ss_pred HHHhcCCCCCceehhhhHHHHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
|+.+|++++|+|+.+|++++....+
T Consensus 92 f~~~D~~~~G~i~~~el~~~l~~~~ 116 (181)
T d1hqva_ 92 FRTYDRDNSGMIDKNELKQALSGFG 116 (181)
T ss_dssp HHHHCTTCCSSBCHHHHHHHHHHHT
T ss_pred cccccccccchhhhHHHHHHHHHcC
Confidence 9999999999999998888876653
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=2.6e-13 Score=114.71 Aligned_cols=91 Identities=23% Similarity=0.313 Sum_probs=80.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..|+.+|+.||+|++|+|+.+||+.+++.+|..++.++++.++..+|. +|.|+|+||+.++... +.+..+|+
T Consensus 70 ~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l------~~~~~~F~ 141 (165)
T d1k94a_ 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKL------RALTDFFR 141 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHH------HHHHHHHH
T ss_pred chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHH------HHHHHHHH
Confidence 568899999999999999999999999999999999999999999976 5889999999987654 35788999
Q ss_pred HhcCCCCCcee--hhhhHHHH
Q 011647 453 YFDKDNSTSQW--KSWNMRLR 471 (480)
Q Consensus 453 ~~D~d~~G~i~--~~e~~~~~ 471 (480)
.+|+|++|+|+ .+|+..+.
T Consensus 142 ~~D~d~~G~i~l~~~ef~~~~ 162 (165)
T d1k94a_ 142 KRDHLQQGSANFIYDDFLQGT 162 (165)
T ss_dssp TTCTTCCSEEEEEHHHHHHHH
T ss_pred HhCCCCCCcEEecHHHHHHHH
Confidence 99999999986 46776553
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.41 E-value=1.1e-13 Score=115.20 Aligned_cols=102 Identities=17% Similarity=0.214 Sum_probs=86.4
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHh-hcCCCCcceeHHHHHHHHcccc------ccccHHH
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA-ADVDGNGTIDYIEFITATMHMN------RVEREEH 446 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~-~d~~~~g~I~~~eF~~~~~~~~------~~~~~~~ 446 (480)
.++++|..||.+++|.|+.+||..+|+.+|..++.++++.++.. .+.+.+|.|+|++|..++.... .....+.
T Consensus 3 ~~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1m45a_ 3 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED 82 (146)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence 46889999999999999999999999999999999999999864 5566789999999999864321 2244578
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 447 LYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 447 ~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+..+|+.+|+|++|.|+.+|++.++..++
T Consensus 83 l~~~F~~~D~~~~G~I~~~el~~~l~~~g 111 (146)
T d1m45a_ 83 FVKAFQVFDKESTGKVSVGDLRYMLTGLG 111 (146)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHHHHST
T ss_pred HHHHHHhhccccccccchhhhhhhhcccC
Confidence 99999999999999999999999987764
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.40 E-value=1.7e-13 Score=99.31 Aligned_cols=66 Identities=29% Similarity=0.490 Sum_probs=62.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+.++++|+.||.+++|+|+..||+.+|+.+|..++.++++.++..+|.|++|+|+|+||+.++..+
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~ 74 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 74 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 468899999999999999999999999999999999999999999999999999999999987643
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.40 E-value=1.8e-13 Score=96.32 Aligned_cols=63 Identities=33% Similarity=0.705 Sum_probs=60.0
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
++++++|+.||.+++|+|+.+||+.+++.+|..+++.+++.++..+|.|++|.|+|+||+.++
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 457899999999999999999999999999999999999999999999999999999999863
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.39 E-value=5.7e-14 Score=121.58 Aligned_cols=103 Identities=26% Similarity=0.313 Sum_probs=73.8
Q ss_pred hhhHHHHh-hHHHhhcccCCCCCCcccHHHHhhhhcccCCC--------CCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 366 NLSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 366 ~~~~~~~~-~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.++++++. .++++|+.+| +++|.|+..||..+|...+.. ++.+.++.++..+|.|++|+|+|+||..++.
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 90 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 34555554 5899999999 558999999999999876543 4568899999999999999999999999875
Q ss_pred cccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 437 HMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 437 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.. +.++.+|+.||+|++|+|+..|++.+...++
T Consensus 91 ~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g 123 (188)
T d1qxpa2 91 RI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAG 123 (188)
T ss_dssp HH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTT
T ss_pred hh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhh
Confidence 43 4789999999999999999999998887664
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=2.1e-13 Score=115.29 Aligned_cols=93 Identities=18% Similarity=0.209 Sum_probs=77.5
Q ss_pred HHhhcccCCCCCCcccHHHHhhhhcccCCCC-----CHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHH
Q 011647 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (480)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~ 450 (480)
..+|+.+ .+.+|.|+.+||..+|+..|.+. +.+.++.++..+|.|++|.|+|+||+.++... +.++.+
T Consensus 3 ~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~ 75 (165)
T d1k94a_ 3 YTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKEN 75 (165)
T ss_dssp HHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHH
Confidence 4566666 57799999999999999887544 56788999999999999999999999886543 478899
Q ss_pred HHHhcCCCCCceehhhhHHHHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
|+.||+|++|+|+.+|++.+...++
T Consensus 76 F~~fD~d~sG~I~~~El~~~l~~~G 100 (165)
T d1k94a_ 76 FMTVDQDGSGTVEHHELRQAIGLMG 100 (165)
T ss_dssp HHHHCTTCCSBCCHHHHHHHHHHTT
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHhh
Confidence 9999999999999999988877654
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.37 E-value=2.7e-13 Score=119.23 Aligned_cols=111 Identities=22% Similarity=0.329 Sum_probs=95.2
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCC-CHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
.+++..++..+.+.|. +.+++|.|+.+||..++..++... ....++.+|..+|.|++|.|+|.||+.++........
T Consensus 20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 4588888888888884 456789999999999999987544 4566789999999999999999999998876666677
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
++.++.+|+.||.|++|+|+.+|+..+...++.+
T Consensus 98 ~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~ 131 (201)
T d1omra_ 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131 (201)
T ss_dssp GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhh
Confidence 7889999999999999999999999888776543
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.37 E-value=4.4e-13 Score=98.75 Aligned_cols=65 Identities=32% Similarity=0.583 Sum_probs=62.1
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+.++++|..||.+++|+|+..||..+++.+|.+++..+++.++..+|.|++|+|+|+||+.++..
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999998865
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=8e-13 Score=114.73 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=94.9
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC-HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
.++.+++..|.+.|... +++|.++..+|..++..++.... ...++.+|..+|.+++|.|+|+||+.++........+
T Consensus 18 ~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~ 95 (187)
T d1g8ia_ 18 YFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD 95 (187)
T ss_dssp SSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence 57888888888888654 57899999999999998876655 4556789999999999999999999998877667778
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEM 477 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~ 477 (480)
+.+..+|+.||.|++|+|+.+|+..+...+..+
T Consensus 96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~ 128 (187)
T d1g8ia_ 96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 128 (187)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhh
Confidence 889999999999999999999999998876654
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.36 E-value=3.9e-13 Score=95.21 Aligned_cols=64 Identities=22% Similarity=0.500 Sum_probs=60.7
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.++++|+.||.|++|+|+..||+.+++.+|..+++++++.+|..+|.|++|.|+|+||+.++.+
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999998754
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.36 E-value=4.6e-13 Score=116.09 Aligned_cols=91 Identities=23% Similarity=0.379 Sum_probs=78.3
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
...|+.+|+.+|+|++|.|+.+||..+|+.+|...+.+.++ ++...|.|++|+|+|+||+.++... +.+..+|
T Consensus 90 ~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~-~~~~~d~d~dg~I~f~eFi~~~~~l------~~~~~~F 162 (186)
T d1df0a1 90 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQ-VIVARFADDELIIDFDNFVRCLVRL------EILFKIF 162 (186)
T ss_dssp HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHH-HHHHHHCCSTTEECHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHH-HHHHHHcCCCCeEeHHHHHHHHHHH------HHHHHHH
Confidence 35688999999999999999999999999999998877665 5556899999999999999987544 4789999
Q ss_pred HHhcCCCCCceehh--hhHH
Q 011647 452 EYFDKDNSTSQWKS--WNMR 469 (480)
Q Consensus 452 ~~~D~d~~G~i~~~--e~~~ 469 (480)
+.+|+|++|.||.+ |+..
T Consensus 163 ~~~D~~~~G~i~l~~~ef~~ 182 (186)
T d1df0a1 163 KQLDPENTGTIQLDLISWLS 182 (186)
T ss_dssp HHHCTTCCSEEEEEHHHHHH
T ss_pred HHhCCCCCCcEEecHHHHHH
Confidence 99999999998664 4443
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.35 E-value=3.3e-13 Score=95.65 Aligned_cols=64 Identities=38% Similarity=0.618 Sum_probs=60.0
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++++++|+.||.+++|+|+.+||..+|+.+|.. .+..+++.++..+|.|++|.|+|+||+.++.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 458899999999999999999999999999875 6999999999999999999999999999875
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.35 E-value=4.8e-13 Score=116.44 Aligned_cols=109 Identities=24% Similarity=0.231 Sum_probs=95.1
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC-HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
.++..++..|.+.|.. .+++|.|+..||..++..++...+ ...++.+|..+|.|++|.|+|.||+.++........+
T Consensus 21 ~fs~~Ei~~l~~~F~~--~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~ 98 (190)
T d1fpwa_ 21 YFDRREIQQWHKGFLR--DCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE 98 (190)
T ss_dssp CSTHHHHHHHHHHHHH--HCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred CCCHHHHHHHHHHHHH--HCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchH
Confidence 5888999999888854 456899999999999998875444 4557899999999999999999999998777767788
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
+.++.+|+.||.|++|.|+.+|+..+...+..
T Consensus 99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~ 130 (190)
T d1fpwa_ 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYK 130 (190)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999887764
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=4.8e-13 Score=92.67 Aligned_cols=61 Identities=33% Similarity=0.671 Sum_probs=58.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~ 433 (480)
++++++|+.||++++|+|+..||+.+|..+|..+++.+++.+++.+|.|++|+|+|+||+.
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 3578999999999999999999999999999999999999999999999999999999984
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.34 E-value=5.3e-13 Score=97.45 Aligned_cols=68 Identities=32% Similarity=0.513 Sum_probs=63.5
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+.++++|+.||.|++|+|+.+||..+|+.+|..++..++..+|..+|.|++|.|+|+||+.++.+
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 34467899999999999999999999999999999999999999999999999999999999998754
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=1.1e-12 Score=113.18 Aligned_cols=110 Identities=25% Similarity=0.310 Sum_probs=95.9
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC-HHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
.+++.+++..+.+.|.. .+++|.|+.+||..++..++.... ...++.+|..+|.+++|.|+|+||+.++........
T Consensus 16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 46889999988888854 467899999999999999875554 567899999999999999999999999877766777
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
++.+..+|+.+|.|++|+|+.+|+..+...+..
T Consensus 94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~ 126 (181)
T d1bjfa_ 94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 126 (181)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhh
Confidence 889999999999999999999999999887654
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.34 E-value=1.4e-12 Score=112.27 Aligned_cols=112 Identities=22% Similarity=0.268 Sum_probs=95.0
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCC-CHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccccc
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 443 (480)
..++..++..+.+.|.. .+++|.|+.+||..++..++... ....++.+|..+|.|++|.|+|+||+.++........
T Consensus 8 t~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 46788888888887754 45689999999999999886554 4556789999999999999999999998876666677
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHHHHh
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWEMQ 478 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~~~ 478 (480)
.+.+..+|+.||.|++|.|+.+|+..+...+..+.
T Consensus 86 ~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~ 120 (178)
T d1s6ca_ 86 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM 120 (178)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhc
Confidence 88999999999999999999999988887776553
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.33 E-value=9.7e-13 Score=112.62 Aligned_cols=86 Identities=26% Similarity=0.456 Sum_probs=75.8
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|+.||.+++|.|+..|+..+|+..|...+++.++.++ .+|.|++|.|+|+||+.++... +.+..+|+
T Consensus 77 ~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~------~~~~~~f~ 149 (173)
T d1alva_ 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII-RRYSDEGGNMDFDNFISCLVRL------DAMFRAFK 149 (173)
T ss_dssp HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH-HHHTCSSSCBCHHHHHHHHHHH------HHHHHHHH
T ss_pred hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhh-ccccCCCCeEeHHHHHHHHHHH------HHHHHHHH
Confidence 4577899999999999999999999999999999988887666 5566999999999999987544 47889999
Q ss_pred HhcCCCCCceehh
Q 011647 453 YFDKDNSTSQWKS 465 (480)
Q Consensus 453 ~~D~d~~G~i~~~ 465 (480)
.+|+|++|.||.+
T Consensus 150 ~~D~d~~G~it~~ 162 (173)
T d1alva_ 150 SLDKDGTGQIQVN 162 (173)
T ss_dssp HHSSSCCSEEEEE
T ss_pred HhCCCCCCcEEec
Confidence 9999999999765
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.33 E-value=1.5e-12 Score=112.57 Aligned_cols=87 Identities=21% Similarity=0.370 Sum_probs=76.5
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
+..|+.+|+.+|+|++|.|+..||..+|..+|..++.+.++.++.. +.|++|.|+|+||+.++..+. .+..+|
T Consensus 92 ~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l~------~~~~~F 164 (188)
T d1qxpa2 92 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRLE------ILFKIF 164 (188)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHHH------HHHHHH
T ss_pred hHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHHH------HHHHHH
Confidence 3568899999999999999999999999999999998888877776 569999999999999876543 677899
Q ss_pred HHhcCCCCCceehh
Q 011647 452 EYFDKDNSTSQWKS 465 (480)
Q Consensus 452 ~~~D~d~~G~i~~~ 465 (480)
+.+|++++|+|+.+
T Consensus 165 ~~~D~~~~G~i~l~ 178 (188)
T d1qxpa2 165 KQLDPENTGTIQLD 178 (188)
T ss_dssp HHSCSSCCSCEEEE
T ss_pred HHhCCCCCCeEEee
Confidence 99999999988654
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=4e-13 Score=114.94 Aligned_cols=99 Identities=20% Similarity=0.218 Sum_probs=84.8
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCC-----CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-----LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
++...++.+|..++ ++||.|+..||..+|+.+|.. ++.+++..++..+|.|++|+|+|+||+.++...
T Consensus 4 ~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------ 76 (172)
T d1juoa_ 4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------ 76 (172)
T ss_dssp CCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------
T ss_pred chHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh------
Confidence 34466888999986 789999999999999998754 457899999999999999999999999887543
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.....+|+.+|.|++|+|+.+|++.+...++
T Consensus 77 ~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g 107 (172)
T d1juoa_ 77 NGWRQHFISFDTDRSGTVDPQELQKALTTMG 107 (172)
T ss_dssp HHHHHHHHTTCTTCCSEECHHHHHHHHHHTT
T ss_pred hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHH
Confidence 3678899999999999999999988876653
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.32 E-value=5.7e-13 Score=115.51 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=81.6
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccC--------CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLG--------TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~--------~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~ 444 (480)
+.++++|..+| ++||.|+..||..+|..+| ...+.+++..++..+|.|++|+|+|+||+.++...
T Consensus 18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------ 90 (186)
T d1df0a1 18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI------ 90 (186)
T ss_dssp HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH------
T ss_pred HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhH------
Confidence 34789999998 8999999999999998764 33567889999999999999999999999886543
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 445 EHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 445 ~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|+.+|+|++|+|+.+|++.+...++
T Consensus 91 ~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g 121 (186)
T d1df0a1 91 QKYQKIYREIDVDRSGTMNSYEMRKALEEAG 121 (186)
T ss_dssp HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTT
T ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHH
Confidence 4688999999999999999999998887653
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.30 E-value=8.9e-13 Score=112.88 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=83.4
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCC--------CCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~ 441 (480)
+++.+++++|..+|. .||.|+..||..+|..+|.. .+.+.+..++..+|.|++|.|+|+||+.++...
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~--- 76 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI--- 76 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh---
Confidence 367889999999995 48999999999999876533 457889999999999999999999999886433
Q ss_pred ccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 442 EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+..+|+.||+|++|+|+..|++.+....+
T Consensus 77 ---~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g 107 (173)
T d1alva_ 77 ---KKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107 (173)
T ss_dssp ---HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHT
T ss_pred ---hHHHHHHHHhccCCCCeecHHHHHHHHHHHH
Confidence 3678889999999999999998888776654
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.29 E-value=3.8e-12 Score=110.61 Aligned_cols=99 Identities=22% Similarity=0.275 Sum_probs=85.9
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc------------ccc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------------RVE 442 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------------~~~ 442 (480)
..++|+.+|.+++|.|+..||..++..+......+.++.+|+.+|.|++|.|+++||..++.... ...
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~ 144 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT 144 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhh
Confidence 35789999999999999999999999998888899999999999999999999999999864321 122
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.++.+..+|+.+|.|+||.|+.+|+++....
T Consensus 145 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (190)
T d1fpwa_ 145 PEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175 (190)
T ss_dssp HHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3577899999999999999999999876543
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.28 E-value=6.3e-12 Score=108.35 Aligned_cols=91 Identities=18% Similarity=0.401 Sum_probs=81.6
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+.+.|+.+|.+++|.|+.+||..++..+|...++++++.++..+|.|++|.|+|+||+.++.... .+..+|+
T Consensus 84 ~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l~------~~~~~F~ 157 (182)
T d1y1xa_ 84 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVC------RVRNVFA 157 (182)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH------HHHHHHH
T ss_pred cccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHH------HHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999875543 6888999
Q ss_pred HhcCCCCCceeh--hhhHH
Q 011647 453 YFDKDNSTSQWK--SWNMR 469 (480)
Q Consensus 453 ~~D~d~~G~i~~--~e~~~ 469 (480)
.+|.+++|.||. +++..
T Consensus 158 ~~D~~~~G~is~~~~~f~~ 176 (182)
T d1y1xa_ 158 FYDRERTGQVTFTFDTFIG 176 (182)
T ss_dssp HHCTTCCSEEEEEHHHHHH
T ss_pred HhCCCCCCcEEeeHHHHHH
Confidence 999999999865 45544
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.25 E-value=8e-12 Score=107.56 Aligned_cols=92 Identities=28% Similarity=0.445 Sum_probs=81.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..++.+|+.+|.+++|.|+.+||+.++...+...++++++.++..+|.+++|.|+|+||+.++... +.+...|+
T Consensus 86 ~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l------~~l~~~F~ 159 (181)
T d1hqva_ 86 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFR 159 (181)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH------HHHHHHHH
T ss_pred cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHH
Confidence 346789999999999999999999999999999999999999999999999999999999887544 36889999
Q ss_pred HhcCCCCCcee--hhhhHHH
Q 011647 453 YFDKDNSTSQW--KSWNMRL 470 (480)
Q Consensus 453 ~~D~d~~G~i~--~~e~~~~ 470 (480)
.+|++++|.|+ .+|+..+
T Consensus 160 ~~D~~~dG~i~~~~~ef~~~ 179 (181)
T d1hqva_ 160 RYDTDQDGWIQVSYEQYLSM 179 (181)
T ss_dssp HHCTTCSSCCCCCHHHHHHH
T ss_pred HhCCCCCCCEEecHHHHHHH
Confidence 99999999875 4566554
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.24 E-value=1.1e-11 Score=107.46 Aligned_cols=109 Identities=23% Similarity=0.221 Sum_probs=83.0
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhc-----ccCCCCC-----------------------------------
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLP-----KLGTRLS----------------------------------- 407 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~-----~~~~~~~----------------------------------- 407 (480)
..+.+++++++|..||.|++|.|+.+||..++. .+|..++
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence 456678899999999999999999999865432 1121111
Q ss_pred -----------------HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHH
Q 011647 408 -----------------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRL 470 (480)
Q Consensus 408 -----------------~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~ 470 (480)
...+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.|+||.|+.+|+.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 168 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 112445788889999999999999999887776788899999999999999999999999988
Q ss_pred HHHHHH
Q 011647 471 RSIIWE 476 (480)
Q Consensus 471 ~~~~~~ 476 (480)
...+|-
T Consensus 169 ~~~~~~ 174 (189)
T d1qv0a_ 169 HLGFWY 174 (189)
T ss_dssp HHHHHT
T ss_pred HHHhCC
Confidence 877764
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=2.3e-11 Score=103.76 Aligned_cols=90 Identities=27% Similarity=0.388 Sum_probs=78.7
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+...|+.+|.+++|.|+.+|+..+|..+|...+.++++.+++.+|. +|.|+|++|+.++.... .+..+|+
T Consensus 77 ~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~~------~~~~~f~ 148 (172)
T d1juoa_ 77 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCVKLR------ALTDSFR 148 (172)
T ss_dssp HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHHHH------HHHHHHH
T ss_pred hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHHHH------HHHHHHH
Confidence 346678999999999999999999999999999999999999999965 58899999999886543 6889999
Q ss_pred HhcCCCCCceeh--hhhHHH
Q 011647 453 YFDKDNSTSQWK--SWNMRL 470 (480)
Q Consensus 453 ~~D~d~~G~i~~--~e~~~~ 470 (480)
.+|+|++|+||. +|+..+
T Consensus 149 ~~D~d~~G~Itl~~~eFl~~ 168 (172)
T d1juoa_ 149 RRDTAQQGVVNFPYDDFIQC 168 (172)
T ss_dssp HTCTTCCSEEEEEHHHHHHH
T ss_pred HhCCCCCCcEEecHHHHHHH
Confidence 999999999965 566543
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.21 E-value=1.9e-11 Score=105.69 Aligned_cols=107 Identities=23% Similarity=0.257 Sum_probs=84.8
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcc-----cCCCCCH-----------------------------------
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSE----------------------------------- 408 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~----------------------------------- 408 (480)
...+.+++++|+.+|.|+||.|+.+||..++.. ++..++.
T Consensus 8 p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (187)
T d1uhka1 8 PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL 87 (187)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHHH
Confidence 455778999999999999999999999765432 2221111
Q ss_pred -----------------HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 409 -----------------SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 409 -----------------~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
..+..+|..+|.|++|.|+.+||..++.......+.+++..+|+.+|.|+||.|+.+|+.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~ 167 (187)
T d1uhka1 88 ATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQH 167 (187)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHH
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence 114557788899999999999999988776666778899999999999999999999998877
Q ss_pred HHHH
Q 011647 472 SIIW 475 (480)
Q Consensus 472 ~~~~ 475 (480)
..+|
T Consensus 168 ~~~~ 171 (187)
T d1uhka1 168 LGFW 171 (187)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7665
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.20 E-value=1.1e-11 Score=106.09 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=71.0
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC----C---------------------------CCC----------
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG----T---------------------------RLS---------- 407 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~---------------------------~~~---------- 407 (480)
+...++++.+|+.+|.|+||.|+.+||..++..++ . ..+
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 45667899999999999999999999988775321 0 011
Q ss_pred -----------HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 408 -----------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 408 -----------~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
...+..+|..+|.|++|.|+.+||..++.... .+.+++..+|+.+|.|+||.|+.+|+..+...++
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~--~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~ 158 (174)
T d2scpa_ 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFF 158 (174)
T ss_dssp HTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHH
T ss_pred hhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHh--hhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHh
Confidence 01234466777777777777777776654332 2344566777777777777777777777666553
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.20 E-value=9.4e-12 Score=96.85 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=45.8
Q ss_pred CCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cccccHHHHHHHHHHhcCCCCCcee
Q 011647 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKAFEYFDKDNSTSQW 463 (480)
Q Consensus 387 ~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~~~~~~~~~~F~~~D~d~~G~i~ 463 (480)
+|.|+..||..++.. ...+.+++..+|..+|.|++|.|+.+|+..++... ....+++++...|+.+|.|+||.|+
T Consensus 21 ~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~ 98 (109)
T d5pala_ 21 PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIG 98 (109)
T ss_dssp TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEE
T ss_pred CCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEe
Confidence 455666666544322 12245556666666666666666666665554322 2234455566666666666666666
Q ss_pred hhhhHHHHH
Q 011647 464 KSWNMRLRS 472 (480)
Q Consensus 464 ~~e~~~~~~ 472 (480)
.+||..++.
T Consensus 99 ~~EF~~~m~ 107 (109)
T d5pala_ 99 ADEFAKMVA 107 (109)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655543
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.20 E-value=1.2e-11 Score=107.42 Aligned_cols=101 Identities=22% Similarity=0.219 Sum_probs=85.3
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-------------
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------------- 439 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------------- 439 (480)
..+..+|+.+|.|++|.|+..||..++..+........+..+|+.+|.|++|.|++.||..++....
T Consensus 58 ~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~ 137 (189)
T d1jbaa_ 58 QYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAE 137 (189)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSS
T ss_pred HHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhh
Confidence 3457899999999999999999999999887777788999999999999999999999988653211
Q ss_pred ----ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 440 ----RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 440 ----~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
....++.+..+|+.+|+|+||.||.+|+.+++..
T Consensus 138 ~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (189)
T d1jbaa_ 138 QQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175 (189)
T ss_dssp TTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred hhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 1123466789999999999999999999887653
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.19 E-value=1.6e-11 Score=95.47 Aligned_cols=86 Identities=17% Similarity=0.149 Sum_probs=56.0
Q ss_pred CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cccccHHHHHHHHHHhcCCCCCc
Q 011647 385 DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKAFEYFDKDNSTS 461 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~~~~~~~~~~~F~~~D~d~~G~ 461 (480)
+++|.|+..||..++.. ...+..+++.+|..+|.|++|.|+.+|+..++... ....+.+++...|+.+|.|+||.
T Consensus 19 d~dG~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~ 96 (109)
T d1pvaa_ 19 KAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGK 96 (109)
T ss_dssp CSTTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSS
T ss_pred CCCCCCcHHHHHHHHHH--ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCc
Confidence 34566777777665433 23345667777777777777777777776665543 22345667777777777777777
Q ss_pred eehhhhHHHHH
Q 011647 462 QWKSWNMRLRS 472 (480)
Q Consensus 462 i~~~e~~~~~~ 472 (480)
|+.+||..++.
T Consensus 97 I~~~EF~~~m~ 107 (109)
T d1pvaa_ 97 IGIDEFETLVH 107 (109)
T ss_dssp BCHHHHHHHHH
T ss_pred EeHHHHHHHHH
Confidence 77777766653
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.19 E-value=5.8e-11 Score=92.30 Aligned_cols=65 Identities=40% Similarity=0.576 Sum_probs=59.9
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
...++++|+.||.|++|+|+.+||+.+++.+ |..+++++++.++..+|.|+||+|+|+||+.++.
T Consensus 40 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d1pvaa_ 40 ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 107 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHH
Confidence 3567899999999999999999999999887 6778999999999999999999999999999864
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.18 E-value=1.7e-11 Score=105.84 Aligned_cols=107 Identities=15% Similarity=0.230 Sum_probs=65.2
Q ss_pred hhHHHHhhHHHhhcc-cCCCCCCcccHHHHhhhhcccCC----CC-----------------------------------
Q 011647 367 LSEEEIMGLKEMFKS-MDTDNSGTITFEELKAGLPKLGT----RL----------------------------------- 406 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~-~D~~~~g~i~~~e~~~~l~~~~~----~~----------------------------------- 406 (480)
+++.+..+++++|+. +|.|+||.|+.+||..++..++. ..
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 466677778888876 58888888888888777754310 00
Q ss_pred ---------------------CHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehh
Q 011647 407 ---------------------SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKS 465 (480)
Q Consensus 407 ---------------------~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~ 465 (480)
....+..+|..+|.|++|.|+.+||..++.... .+.+++..+|+.+|+|++|.|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~~~~~~f~~~D~d~dG~i~~~ 159 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLN 159 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSCCSHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHHHHHHHHHHcCCCCCCCCcHH
Confidence 011244456666666666666666666554332 334456666666666666666666
Q ss_pred hhHHHHHHHH
Q 011647 466 WNMRLRSIIW 475 (480)
Q Consensus 466 e~~~~~~~~~ 475 (480)
|+.++...++
T Consensus 160 EF~~~~~~f~ 169 (185)
T d2sasa_ 160 RYKELYYRLL 169 (185)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666665544
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.18 E-value=2.1e-11 Score=94.76 Aligned_cols=67 Identities=39% Similarity=0.531 Sum_probs=51.4
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.....++++|+.||.|++|+|+.+||+.+++.+ +..+++++++.++..+|.|+||+|+|+||+.++.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 334557778888888888888888888888776 3456778888888888888888888888887653
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.18 E-value=9.1e-11 Score=91.15 Aligned_cols=65 Identities=37% Similarity=0.514 Sum_probs=60.0
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhccc---CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.+.++++|+.||.|++|+|+.+||+.+|+.+ |..++.++++.++..+|.|++|.|+|+||+.++.
T Consensus 40 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 3578999999999999999999999999875 6788999999999999999999999999999874
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=2.3e-11 Score=105.21 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=84.7
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc------------cccc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM------------NRVE 442 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~------------~~~~ 442 (480)
...+|+.+|.+++|.|+..||..++..+......+.+..+|+.+|.|++|.|+.+|+..++... ....
T Consensus 62 ~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~ 141 (187)
T d1g8ia_ 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT 141 (187)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred HHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence 3568999999999999999999999887655567889999999999999999999999876422 1223
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.++.+..+|+.+|.|+||.||.+|+.+....-.
T Consensus 142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p 174 (187)
T d1g8ia_ 142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKADP 174 (187)
T ss_dssp HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCH
Confidence 456789999999999999999999998776543
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=4.2e-11 Score=102.73 Aligned_cols=106 Identities=14% Similarity=0.188 Sum_probs=83.8
Q ss_pred hhhhHHHHhhHHHhhcccCCCCCCc--------ccHHHHhhhhcccCCCCCHHHHHHHHHhhcCC-CCcceeHHHHHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMDTDNSGT--------ITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITAT 435 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D~~~~g~--------i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~I~~~eF~~~~ 435 (480)
+.++.+++..+++.|..+|++++|. ++.+++..+. .+..++ -.+.+|..+|.| ++|.|+|+||+.++
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~-~l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l 84 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP-ELKANP---FKERICRVFSTSPAKDSLSFEDFLDLL 84 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSH-HHHTCT---THHHHHHHHCCSTTCCEECHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCc-ccccCh---HHHHHHHhccCCCCCCcCcHHHHHHHH
Confidence 4688999999999999999888765 4555554422 222222 357789999987 79999999999987
Q ss_pred cccc-ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 436 MHMN-RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 436 ~~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.... ....++.++.+|+.||.|++|+|+.+|+..+...+
T Consensus 85 ~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~ 124 (180)
T d1xo5a_ 85 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCL 124 (180)
T ss_dssp HHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHH
Confidence 6543 45667889999999999999999999999988766
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.15 E-value=2.5e-11 Score=94.09 Aligned_cols=65 Identities=31% Similarity=0.471 Sum_probs=50.2
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccC---CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.++++++|+.||.+++|+|+..||..+++.++ ..++.++++.+|+.+|.|++|.|+|+||+.++.
T Consensus 39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 39 LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 34577788888888888888888888887764 456778888888888888888888888887653
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=3.4e-11 Score=89.03 Aligned_cols=64 Identities=22% Similarity=0.379 Sum_probs=60.8
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
...+.++|..+|.+++|.|+.+||+.+|..++..+++.++..++..+|.|++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4568899999999999999999999999999999999999999999999999999999999865
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.13 E-value=1.2e-11 Score=116.52 Aligned_cols=110 Identities=23% Similarity=0.287 Sum_probs=91.0
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccc-----
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR----- 440 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~----- 440 (480)
.++.++...++++|..+|.|++|.|+.+||+.+|..+|..++..++..++..+|.|++|.|+|.||+.++.....
T Consensus 115 ~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F 194 (321)
T d1ij5a_ 115 MLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADF 194 (321)
T ss_dssp CCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHH
Confidence 456778888999999999999999999999999999999999999999999999999999999999754211000
Q ss_pred -------------------------c-----------------------------ccHHHHHHHHHHhcCCCCCceehhh
Q 011647 441 -------------------------V-----------------------------EREEHLYKAFEYFDKDNSTSQWKSW 466 (480)
Q Consensus 441 -------------------------~-----------------------------~~~~~~~~~F~~~D~d~~G~i~~~e 466 (480)
. .....+..+|+.+|.|++|+|+.+|
T Consensus 195 ~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~E 274 (321)
T d1ij5a_ 195 RKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEE 274 (321)
T ss_dssp HHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHH
T ss_pred HHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHHH
Confidence 0 0012244589999999999999999
Q ss_pred hHHHHHHHH
Q 011647 467 NMRLRSIIW 475 (480)
Q Consensus 467 ~~~~~~~~~ 475 (480)
++.+...++
T Consensus 275 ~~~~l~~~~ 283 (321)
T d1ij5a_ 275 VQKVLEDAH 283 (321)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999887765
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.12 E-value=4.9e-11 Score=92.92 Aligned_cols=83 Identities=14% Similarity=0.039 Sum_probs=44.4
Q ss_pred CCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc---ccccHHHHHHHHHHhcCCCCCcee
Q 011647 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---RVEREEHLYKAFEYFDKDNSTSQW 463 (480)
Q Consensus 387 ~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~---~~~~~~~~~~~F~~~D~d~~G~i~ 463 (480)
+|.|+..||..++.... .+..+++.+|+.+|.|++|.|+.+||..++..+. ...+.+++..+|+.+|.|+||.|+
T Consensus 21 ~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~ 98 (109)
T d1rwya_ 21 ADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98 (109)
T ss_dssp TTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEE
T ss_pred CCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEe
Confidence 34566666555443221 2345555566666666666666666655544321 224455556666666666666666
Q ss_pred hhhhHHHH
Q 011647 464 KSWNMRLR 471 (480)
Q Consensus 464 ~~e~~~~~ 471 (480)
.+|+.+++
T Consensus 99 ~~EF~~~m 106 (109)
T d1rwya_ 99 VEEFSTLV 106 (109)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665554
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.11 E-value=1.8e-10 Score=89.65 Aligned_cols=69 Identities=35% Similarity=0.479 Sum_probs=61.2
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccC---CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.......++++|+.||.|++|+|+.+||+.+|+.++ ..+++.+++.+|..+|.|+||+|+|+||+.++.
T Consensus 36 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 107 (109)
T d1rwya_ 36 KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred ccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 333456788999999999999999999999998874 467899999999999999999999999999874
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.10 E-value=4.6e-11 Score=104.63 Aligned_cols=98 Identities=21% Similarity=0.322 Sum_probs=82.4
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc-------------
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV------------- 441 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~------------- 441 (480)
...+|+.+|.+++|.|+..||..++..+........++.+|..+|.|++|.|+++||..++......
T Consensus 65 ~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~ 144 (201)
T d1omra_ 65 AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDE 144 (201)
T ss_dssp HHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGG
T ss_pred HHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhh
Confidence 4678999999999999999999999888776777889999999999999999999999876432111
Q ss_pred -ccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 442 -EREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 442 -~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..++.+..+|+.+|+|+||.||.+|+.+...
T Consensus 145 ~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~ 176 (201)
T d1omra_ 145 NTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL 176 (201)
T ss_dssp SSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 1245678899999999999999999876543
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.10 E-value=6.8e-11 Score=89.04 Aligned_cols=68 Identities=25% Similarity=0.298 Sum_probs=62.7
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++.+.++++|+.+|.+++|.|+.+|+..++...+ ++..++..++..+|.|++|.|+|+||+.++.
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~ 70 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 5788889999999999999999999999999999976 5789999999999999999999999997653
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=3.4e-11 Score=91.30 Aligned_cols=68 Identities=22% Similarity=0.271 Sum_probs=62.5
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++.+.+.++|+.+|.|++|.|+.+|+..++...| ++.+++..++..+|.|++|.|+|+||+.++.
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 5678889999999999999999999999999999876 5689999999999999999999999998763
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.08 E-value=2.6e-11 Score=87.92 Aligned_cols=65 Identities=26% Similarity=0.471 Sum_probs=56.1
Q ss_pred hhHHHhhcccCCC--CCCcccHHHHhhhhcccCCCCC--HHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 373 MGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLS--ESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 373 ~~~~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~--~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
++++++|+.||.+ ++|+|+.+||+.+|+.+|..++ ..+++.++..+|.|++|.|+|+||+.++.+
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence 4578889988654 5799999999999999987765 457999999999999999999999998754
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.07 E-value=1.5e-10 Score=99.59 Aligned_cols=101 Identities=19% Similarity=0.174 Sum_probs=82.5
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc--------cccccHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHM--------NRVEREE 445 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~--------~~~~~~~ 445 (480)
...+|..+|.+++|.|+..||..++..+... .....++.+|..+|.|++|.|+.+|+..++... .....++
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 3578999999999999999999998776433 446679999999999999999999999976432 1112245
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 446 HLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 446 ~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
.+..+|+.+|.|++|.|+.+|+.++...-.
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~~p 165 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLRHP 165 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHSG
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHCH
Confidence 578899999999999999999998876543
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.07 E-value=2.9e-10 Score=92.25 Aligned_cols=95 Identities=19% Similarity=0.174 Sum_probs=79.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCC---HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS---ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~---~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~ 449 (480)
..+..+|..+|.+++|.|+.+||..++........ ...+..+|..+|.|++|.|+.+||..++.... .+.+..
T Consensus 36 ~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~----~~~~~~ 111 (134)
T d1jfja_ 36 QLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAE 111 (134)
T ss_dssp HHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTT----CHHHHH
T ss_pred HHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccCCcccHHHHHHHHHhcC----cHHHHH
Confidence 35677899999999999999999998877543333 35577899999999999999999999976543 356788
Q ss_pred HHHHhcCCCCCceehhhhHHHH
Q 011647 450 AFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 450 ~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
.|+.+|+|+||.||.+|+.+++
T Consensus 112 ~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 112 QVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHh
Confidence 8999999999999999998764
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.06 E-value=1.6e-10 Score=99.23 Aligned_cols=99 Identities=21% Similarity=0.287 Sum_probs=85.1
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc------------ccc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------------RVE 442 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------------~~~ 442 (480)
..++|..+|.+++|.|+..||..++...-.....+.+..+|..+|.|++|.|+.+||..++.... ...
T Consensus 61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~ 140 (181)
T d1bjfa_ 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDEST 140 (181)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSS
T ss_pred HHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCccccc
Confidence 45789999999999999999999998887666678899999999999999999999999875421 123
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.++.+..+|+.+|.|+||.||.+|+.++...
T Consensus 141 ~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 171 (181)
T d1bjfa_ 141 PEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 171 (181)
T ss_dssp HHHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 4567889999999999999999999987764
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.06 E-value=4e-10 Score=87.38 Aligned_cols=102 Identities=17% Similarity=0.116 Sum_probs=80.2
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---cc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NR 440 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---~~ 440 (480)
...++.+++..+.+.+ +.+|.++..+|...+... ..+..+++.+|+.+|.|++|+|+++||..++..+ ..
T Consensus 3 ~d~ls~~dI~~~l~~~-----~~~~s~~~~~F~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (108)
T d1rroa_ 3 TDILSAEDIAAALQEC-----QDPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GGTSCHHHHHHHHHHT-----CSTTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred hhhCCHHHHHHHHHhc-----ccCCCccHHHHHHHHccC--cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccC
Confidence 4456666665554433 456789999996655432 3467889999999999999999999999988654 33
Q ss_pred cccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 441 VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
..+++++..+|+.+|.|+||.|+.+||..++.
T Consensus 76 ~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 76 ELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 46788999999999999999999999998764
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.05 E-value=4.7e-11 Score=101.93 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=25.1
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPK 401 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~ 401 (480)
.++++++|+.+|.|++|.|+.+||+.++..
T Consensus 6 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~ 35 (176)
T d1nyaa_ 6 SDRLKKRFDRWDFDGNGALERADFEKEAQH 35 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 356788899999999999999999888754
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=3.1e-10 Score=97.14 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=82.0
Q ss_pred HHHhhcccCCC-CCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc---------ccccc
Q 011647 375 LKEMFKSMDTD-NSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---------NRVER 443 (480)
Q Consensus 375 ~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~---------~~~~~ 443 (480)
..++|+.||.+ ++|.|+.+||..++..+. ....++.+..+|+.+|.|++|.|+.+|+..++... .....
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 35688899987 799999999999998764 44456789999999999999999999999976532 11222
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
++-+..+|+.+|.|+||.||.+|+.++...-.
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P 170 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISRSP 170 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHCH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCH
Confidence 34577899999999999999999998876543
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.03 E-value=1.2e-10 Score=99.66 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=80.1
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc------------ccc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------------RVE 442 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~------------~~~ 442 (480)
...+|+.+|.+++|.|+.+||..++..+........+..+|+.+|.|++|.|++.|+..++.... ...
T Consensus 53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 132 (178)
T d1s6ca_ 53 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDT 132 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHH
Confidence 45789999999999999999999998776666788899999999999999999999988654321 112
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
.++.+..+|+.+|+|+||.||.+|+.+..
T Consensus 133 ~~~~~~~if~~~D~d~DG~Is~~EF~~~i 161 (178)
T d1s6ca_ 133 PRQHVDVFFQKMDKNKDGIVTLDEFLESC 161 (178)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 34567899999999999999999997653
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.02 E-value=1.5e-10 Score=95.68 Aligned_cols=99 Identities=22% Similarity=0.275 Sum_probs=80.9
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCC-CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F 451 (480)
..+..+|..+|.+++|.|+..||..++..... ....+.+..+|..+|.|++|.|+..||..++.......+.+++..+|
T Consensus 45 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~ 124 (146)
T d1exra_ 45 AELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMI 124 (146)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 34567788889999999999999888765322 22356788899999999999999999999888777777888999999
Q ss_pred HHhcCCCCCceehhhhHHHH
Q 011647 452 EYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 452 ~~~D~d~~G~i~~~e~~~~~ 471 (480)
+.+|.|++|.|+.+|+.+++
T Consensus 125 ~~~D~d~dG~i~~~eF~~~l 144 (146)
T d1exra_ 125 READIDGDGHINYEEFVRMM 144 (146)
T ss_dssp HHHCSSSSSSBCHHHHHHHH
T ss_pred HHhCCCCCCeEeHHHHHHHh
Confidence 99999999999999988775
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.00 E-value=3.3e-10 Score=94.68 Aligned_cols=67 Identities=31% Similarity=0.553 Sum_probs=58.2
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
....+..+|+.||.+++|+|+.+||..++..+|..+++.+++.+|..+|.|+||.|+|+||+.++.+
T Consensus 89 ~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g 155 (156)
T d1dtla_ 89 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 155 (156)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence 3456788999999999999999999999999999999999999999999999999999999988754
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=3.9e-10 Score=85.14 Aligned_cols=67 Identities=22% Similarity=0.339 Sum_probs=61.2
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.++...+.++|..+| +++|+|+.+|++.++...| +..++++.|+..+|.|++|.|+|+||+.++.
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 57788899999999999 8999999999999999876 4688999999999999999999999987654
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.97 E-value=1.3e-09 Score=84.23 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=79.2
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc---cccc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---RVER 443 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~---~~~~ 443 (480)
++.+++. .++...|. +|.|+..||...+...+ ...++++.+|+.+|.|++|.|+.+||..++..+. ...+
T Consensus 5 ls~~di~---~~~~~~~~--~gsi~~~eF~~~~~l~~--~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~ 77 (107)
T d2pvba_ 5 LKDADVA---AALAACSA--ADSFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT 77 (107)
T ss_dssp SCHHHHH---HHHHHTCS--TTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC
T ss_pred CCHHHHH---HHHHhccC--CCCcCHHHHHHHHhccc--CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCC
Confidence 4555544 44444444 56799999988776432 3578899999999999999999999999877653 3467
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 444 EEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 444 ~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+++++.+|+.+|.|+||.|+.+|+..+++
T Consensus 78 ~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 78 DAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 89999999999999999999999988765
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.97 E-value=2.6e-10 Score=85.87 Aligned_cols=70 Identities=21% Similarity=0.367 Sum_probs=59.7
Q ss_pred HHHHhhHHHhhccc-CCCCC-CcccHHHHhhhhcccC-----CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSM-DTDNS-GTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..++.+.++|..| |.+|+ |.|+.+||+.+|..++ .+.+..+++.+|..+|.|+||.|+|+||+.++..+
T Consensus 5 E~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34457788999887 88875 9999999999998764 45678999999999999999999999999987543
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.97 E-value=9.3e-11 Score=87.86 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=59.6
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc-----CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..++.+..+|..+|.+ +|.|+.+||+.+|... +...+...++.+|..+|.|+||.|+|+||+.++..+
T Consensus 5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 45577899999999987 8999999999999873 444567889999999999999999999999987553
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=7.3e-10 Score=93.45 Aligned_cols=99 Identities=19% Similarity=0.239 Sum_probs=82.1
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCCC-CHHHHHHHHHhhcCCCCcceeHHHHHHHHccc-----cccccHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHM-----NRVEREEHLY 448 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-----~~~~~~~~~~ 448 (480)
..++|..+|.+++|.|+.+||..++....... ....+..+|..+|.|++|.|+.+|+..++... .....++.+.
T Consensus 50 ~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~ 129 (165)
T d1auib_ 50 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 129 (165)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHH
Confidence 34678899999999999999999998875443 45678999999999999999999999987542 1223356688
Q ss_pred HHHHHhcCCCCCceehhhhHHHHHH
Q 011647 449 KAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 449 ~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+|..+|.|+||.||.+|+.+++..
T Consensus 130 ~~~~~~D~~~dG~Is~~EF~~i~~~ 154 (165)
T d1auib_ 130 KTIINADKDGDGRISFEEFCAVVGG 154 (165)
T ss_dssp HHHHHHCTTSSSSEEHHHHHHHHGG
T ss_pred HHHHHcCCCCCCcEeHHHHHHHHhc
Confidence 9999999999999999999987763
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.96 E-value=4.8e-10 Score=84.05 Aligned_cols=70 Identities=21% Similarity=0.369 Sum_probs=59.5
Q ss_pred HHHHhhHHHhhccc-CCCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
++.+..+.++|..| |.+++| .|+.+||+.+|+. ++...++++++.+|..+|.|+||+|+|+||+.++.++
T Consensus 5 E~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 34567788999998 666655 7999999999987 4567789999999999999999999999999987654
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.96 E-value=4.9e-10 Score=92.46 Aligned_cols=63 Identities=32% Similarity=0.548 Sum_probs=51.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+.+..+|+.+|.+++|+|+.+||+.++..+|...+..+++.++..+| |++|+|+|+||+.++.
T Consensus 83 ~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence 45677888888888888888888888888888888888888888887 8888888888887764
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.93 E-value=6.3e-11 Score=85.99 Aligned_cols=69 Identities=19% Similarity=0.340 Sum_probs=57.9
Q ss_pred HHHhhHHHhhcccCC-C-CCCcccHHHHhhhhccc--CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 370 EEIMGLKEMFKSMDT-D-NSGTITFEELKAGLPKL--GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~-~-~~g~i~~~e~~~~l~~~--~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
...+.++.+|..||. + +.|.|+.+||+.+++.+ +...+.++++.++..+|.|+||.|+|+||+.++.++
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 345678899999975 3 45899999999999987 455567789999999999999999999999987543
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.93 E-value=6.8e-10 Score=77.46 Aligned_cols=63 Identities=21% Similarity=0.230 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHH
Q 011647 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRL 470 (480)
Q Consensus 408 ~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~ 470 (480)
++++..+|..+|.|++|.|+++||..++..+....+++++..+|+.+|.|++|.|+.+|+.++
T Consensus 2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~ 64 (65)
T d1fw4a_ 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 64 (65)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence 578899999999999999999999999988888889999999999999999999999999876
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.92 E-value=8e-10 Score=77.64 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=58.9
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 410 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.++.+|..+|.|++|.|+..||..++.......+.+++..+|+.+|.|++|.|+.+|+..++..
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3678999999999999999999999988888888999999999999999999999999887653
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.92 E-value=4.2e-10 Score=85.31 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=58.7
Q ss_pred HHHHhhHHHhhccc-CCCCC-CcccHHHHhhhhcccC--CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSM-DTDNS-GTITFEELKAGLPKLG--TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~-g~i~~~e~~~~l~~~~--~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..+..+.++|+.| |.+++ |.|+..||+.+++.++ ...+..+++.++..+|.|+||.|+|+||+.++...
T Consensus 10 E~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34567888999887 77775 9999999999999864 33466779999999999999999999999987543
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.91 E-value=6.6e-10 Score=83.03 Aligned_cols=70 Identities=19% Similarity=0.339 Sum_probs=59.8
Q ss_pred HHHHhhHHHhhccc-CCCCCC-cccHHHHhhhhccc-----CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPKL-----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~g-~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..+..+..+|+.| |++|+| .|+++||+.+|+.. +...+..+++.++..+|.|+||+|+|+||+.++..+
T Consensus 5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 45567788899887 999999 59999999999874 445678999999999999999999999999987543
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.89 E-value=2.4e-09 Score=89.81 Aligned_cols=67 Identities=28% Similarity=0.479 Sum_probs=56.0
Q ss_pred HHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 371 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
....++++|+.+|.+++|.|+..||+.++...+...+..+++.+|..+|.|++|.|+|+||+.++.+
T Consensus 94 ~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 3455677888888888888888888888888888888888888888888888888888888888754
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=98.89 E-value=2.9e-09 Score=77.77 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=62.9
Q ss_pred CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 404 TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
...+++++..+|..+|.|++|.|+..||..++.......+.+++..+|+.+|.|++|.|+.+||.++++
T Consensus 10 ~~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 334678899999999999999999999999998888788899999999999999999999999988764
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.89 E-value=2.1e-09 Score=77.82 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
|..-+.+++..+|..+|.|++|.|+.+||..++..+....+.+++..+|+.+|.|++|.|+.+||.+++..
T Consensus 3 ge~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp TTSSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 34445778999999999999999999999999988877788899999999999999999999999888653
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=1e-09 Score=89.87 Aligned_cols=97 Identities=15% Similarity=0.284 Sum_probs=73.5
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccC-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHH
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~ 453 (480)
+...+..+|.+++|.|+..||...+.... ......++..+|..+|.+++|.|+.++|..++.......+.+++..+|+.
T Consensus 44 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~ 123 (141)
T d2obha1 44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 123 (141)
T ss_dssp HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 44556667888888888888877775532 12234667778888888888888888888887777667778888888888
Q ss_pred hcCCCCCceehhhhHHHH
Q 011647 454 FDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 454 ~D~d~~G~i~~~e~~~~~ 471 (480)
+|.|++|.|+.+||.+++
T Consensus 124 ~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 124 ADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HCTTSSSSBCHHHHHHHH
T ss_pred HCCCCCCCEeHHHHHHhC
Confidence 888888888888887764
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.88 E-value=8.7e-10 Score=90.93 Aligned_cols=64 Identities=31% Similarity=0.652 Sum_probs=60.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+.+.++|..+|.+++|.|+.+||..+|..+|..+++.+++.++..+|.|++|.|+|+||+..+.
T Consensus 81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~ 144 (146)
T d1m45a_ 81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 144 (146)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999999999999999998764
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.87 E-value=2.6e-09 Score=76.70 Aligned_cols=69 Identities=19% Similarity=0.080 Sum_probs=63.4
Q ss_pred CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
..+++++..+|..+|.|++|.|+..||..++..+....+.+++..+|+.+|.|++|.|+.+||.+++..
T Consensus 5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 346789999999999999999999999999988888888999999999999999999999999888653
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.86 E-value=7e-10 Score=82.13 Aligned_cols=69 Identities=25% Similarity=0.443 Sum_probs=60.0
Q ss_pred HHHHhhHHHhhccc-CCCCCC-cccHHHHhhhhcc---cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPK---LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~g-~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+..+.++|..| |++++| .|+..||+.++.. ++...++.+++.+++.+|.|+||+|+|+||+.++..
T Consensus 5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 44566788899888 999999 6999999999987 566677889999999999999999999999998754
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.85 E-value=3e-09 Score=91.71 Aligned_cols=65 Identities=28% Similarity=0.322 Sum_probs=56.4
Q ss_pred HhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
...+..+|..+|.|++|+|+.+||..++..+|..++.++++.+|..+|.|+||.|+|+||+.++.
T Consensus 106 ~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~ 170 (189)
T d1qv0a_ 106 REWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170 (189)
T ss_dssp HHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 34567789999999999999999999999999999999999999999999999999999998763
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=5.5e-11 Score=100.85 Aligned_cols=96 Identities=11% Similarity=0.113 Sum_probs=68.6
Q ss_pred HHHhhcc--cCCCCCCcccHHHHhhhhcccCCCC--CHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHH
Q 011647 375 LKEMFKS--MDTDNSGTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (480)
Q Consensus 375 ~~~~F~~--~D~~~~g~i~~~e~~~~l~~~~~~~--~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~ 450 (480)
++++|.. +|.|++|.|+.+||..+++..+... ..+.+..++...|.+++|.|+|+||..++..+. ...++..+
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~ 83 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHH
Confidence 3444443 7999999999999999998765432 234556678888999999999999999876543 34579999
Q ss_pred HHHhcCCCCCceehhhhHHHHHH
Q 011647 451 FEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 451 F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
|+.+|.|++|+||.+|++..+.+
T Consensus 84 F~~~d~d~~~~it~~el~~fL~~ 106 (170)
T d2zkmx1 84 FTSYHAKAKPYMTKEHLTKFINQ 106 (170)
T ss_dssp CC--------CCCHHHHHHHHHH
T ss_pred HHHHcCCCCCcccHHHHHHHHHH
Confidence 99999999999999999877654
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=98.84 E-value=4.6e-09 Score=76.63 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=57.4
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
.+++.+|..+|.|++|.|+.+||..++..+. ..+.+++..+|+.+|.|++|.|+.+|+..++..
T Consensus 6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 6 ADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4677899999999999999999999988776 467889999999999999999999999887654
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.83 E-value=1.8e-09 Score=88.91 Aligned_cols=65 Identities=26% Similarity=0.359 Sum_probs=61.2
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
..+.++|+.||.+++|+|+..||+.+|..+|.++++++++.++..+|.|++|+|+|.+|+.++.+
T Consensus 77 ~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 77 DVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141 (145)
T ss_pred HHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence 45788999999999999999999999999999999999999999999999999999999999864
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=5.4e-10 Score=86.69 Aligned_cols=69 Identities=28% Similarity=0.288 Sum_probs=61.8
Q ss_pred hhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 366 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.++.++.+.+.++|+.+|++++|+|+.+|++.+|.+.| ++..++..++..+|.|++|.|+++||+.++.
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 46777889999999999999999999999999998876 4567799999999999999999999998764
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.83 E-value=4e-09 Score=90.69 Aligned_cols=67 Identities=24% Similarity=0.332 Sum_probs=61.6
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.....+..+|..+|.|++|.|+.+||+.++..+|...+.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 102 ~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~ 168 (187)
T d1uhka1 102 LIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168 (187)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 3445578899999999999999999999999999999999999999999999999999999998753
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.80 E-value=1.1e-08 Score=83.64 Aligned_cols=63 Identities=22% Similarity=0.471 Sum_probs=37.2
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+.+.++|+.||.+++|+|+.+||+.++..+|.+++.++++.++..+|.| +|+|+|+||+.++.
T Consensus 76 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~ 138 (142)
T d1wdcb_ 76 ETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 138 (142)
T ss_dssp HHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred hhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHh
Confidence 3455556666666666666666666666666556666666666666555 35666666665553
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.79 E-value=7.7e-09 Score=75.42 Aligned_cols=64 Identities=22% Similarity=0.177 Sum_probs=58.2
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 410 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
++..+|..+|.|++|.|+.+||..++.......++.++..+|+.+|.|++|.|+.+||..++..
T Consensus 15 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 15 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4566799999999999999999999988887888999999999999999999999999887753
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.78 E-value=6.1e-09 Score=71.42 Aligned_cols=61 Identities=5% Similarity=0.026 Sum_probs=56.5
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMR 469 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~ 469 (480)
+++..+|..+|.+++|.|+.+||..++.......+..++...|+.+|.|++|.|+.+||.+
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 4678899999999999999999999998888888999999999999999999999998753
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=2.1e-09 Score=81.90 Aligned_cols=62 Identities=21% Similarity=0.259 Sum_probs=45.5
Q ss_pred HHHhhcccCCCCCCcccHHHHhhhhcccCCC-------C---------CHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTR-------L---------SESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 375 ~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-------~---------~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
++.+|..+|.|+||.|+.+||..++..++.. . ....++.+|..+|.|+||.|+|+||+.++.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~ 95 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 5788999999999999999999988754211 0 123456677777777788888887777653
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.77 E-value=9.9e-10 Score=81.06 Aligned_cols=70 Identities=13% Similarity=0.288 Sum_probs=59.1
Q ss_pred HHHHhhHHHhhccc-CCCCCCc-ccHHHHhhhhcc-cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSM-DTDNSGT-ITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~g~-i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
+..+..+.++|+.+ |++|+|. ++.+||+.++.. ++...++++++.++..+|.|+||+|+|+||+.++..+
T Consensus 6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 44556778888887 8999986 599999999976 6766677889999999999999999999999987653
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.77 E-value=4.1e-09 Score=73.99 Aligned_cols=64 Identities=20% Similarity=0.226 Sum_probs=58.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccccc-cccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+++..+|..+|.|++|.|+..||..++..... ..+.+++...|+.+|.|++|.|+.+||..++.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 57889999999999999999999999888765 36899999999999999999999999988764
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.76 E-value=7.6e-09 Score=75.87 Aligned_cols=69 Identities=22% Similarity=0.362 Sum_probs=57.0
Q ss_pred HHHHhhHHHhhccc-CCCCCC-cccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~-D~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
+..+..+..+|..+ +.++++ .|+.+||+.+|+. ++...++..++.++...|.|+||.|+|+||+.++..
T Consensus 4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 44566788899888 455555 6999999999987 344557899999999999999999999999998754
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.76 E-value=1.1e-09 Score=83.36 Aligned_cols=70 Identities=19% Similarity=0.315 Sum_probs=58.8
Q ss_pred hHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCC-------CCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 368 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
.+..+..+.++|+.+| +++|.|+..||+.+|+.... ..+...++.+|..+|.|+||.|+|+||+.++..+
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 4566778889999997 68899999999999998643 2345678999999999999999999999987653
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.76 E-value=6.4e-09 Score=76.93 Aligned_cols=84 Identities=18% Similarity=0.189 Sum_probs=68.2
Q ss_pred CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceeh
Q 011647 385 DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWK 464 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~ 464 (480)
+++|.|+..+...+ ..+.... -.++..+|..+|.|++|.|++.||..++.......+++++..+|+.+|.|++|.|+.
T Consensus 1 ~~~g~id~~~~~ma-~~l~~~~-i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~ 78 (87)
T d1s6ja_ 1 HSSGHIDDDDKHMA-ERLSEEE-IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHHSS-SSSCSSS-TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCchHHHHH-hhCCHHH-HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeH
Confidence 36788888774433 3333222 134778999999999999999999999988887888999999999999999999999
Q ss_pred hhhHHH
Q 011647 465 SWNMRL 470 (480)
Q Consensus 465 ~e~~~~ 470 (480)
+||..+
T Consensus 79 ~EFl~a 84 (87)
T d1s6ja_ 79 GEFIAA 84 (87)
T ss_dssp HHHTTC
T ss_pred HHHHHH
Confidence 998643
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.75 E-value=3.3e-09 Score=90.83 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=82.1
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHH
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~ 452 (480)
..+..+|..+|.+++|.|+..++..+..........+++..+|..+|.+++|.|+..++..++.... .+++++..+|+
T Consensus 46 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~g--l~~~ev~~~f~ 123 (182)
T d1s6ia_ 46 SEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIK 123 (182)
T ss_dssp HHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHH
T ss_pred ccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHHHHHHHHHhhcCCCccchhhhhhhhhhcC--ccHHHHHHHHH
Confidence 3467788999999999999999988776655445556788899999999999999999998876543 56778899999
Q ss_pred HhcCCCCCceehhhhHHHHH
Q 011647 453 YFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 453 ~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+|.|+||.|+.+||++++.
T Consensus 124 ~~D~d~DG~Is~~EF~~~m~ 143 (182)
T d1s6ia_ 124 EIDQDNDGQIDYGEFAAMMR 143 (182)
T ss_dssp HHCSSSSSEEETTHHHHTTS
T ss_pred HhhcCCCCeEeHHHHHHHHH
Confidence 99999999999999988754
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=98.74 E-value=8e-09 Score=73.73 Aligned_cols=63 Identities=21% Similarity=0.199 Sum_probs=57.4
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 410 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
++..+|..+|.|++|.|++.||..++.......+++.+..+|+.+|.|++|.|+.+||..++.
T Consensus 9 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp HHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 455679999999999999999999998888788899999999999999999999999987754
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.74 E-value=2e-08 Score=82.32 Aligned_cols=83 Identities=19% Similarity=0.180 Sum_probs=36.7
Q ss_pred CCCcccHHHHhhhhcccC---CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCce
Q 011647 386 NSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQ 462 (480)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i 462 (480)
++|.|+..||..++.... ......++..+|+.+|.|++|.|+.+||..++.......+.+++...++. |.|++|.|
T Consensus 55 ~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I 133 (145)
T d2mysc_ 55 NAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCI 133 (145)
T ss_pred ccCccchhHHHHHHhhhhhccccchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeE
Confidence 344455555544443321 11123334444555555555555555555444443333444444444442 44455555
Q ss_pred ehhhhHH
Q 011647 463 WKSWNMR 469 (480)
Q Consensus 463 ~~~e~~~ 469 (480)
+.+||.+
T Consensus 134 ~y~eF~~ 140 (145)
T d2mysc_ 134 NYEAFVK 140 (145)
T ss_pred EHHHHHH
Confidence 5544433
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.74 E-value=3.1e-08 Score=81.94 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=76.9
Q ss_pred hhhhhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhccc-C-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc
Q 011647 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-G-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~ 441 (480)
+...+++++.. +...|.+++|.|+.+||..++... . ...+..++..+|+.+|.+++|.|+.+||..++......
T Consensus 39 G~~~t~~e~~~----~~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ 114 (152)
T d1wdcc_ 39 GINPRNEDVFA----VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER 114 (152)
T ss_dssp TCCCCHHHHHH----TTCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC
T ss_pred ccCccHhhhhh----hhhhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCCC
Confidence 33445554433 234577888889988888877654 2 33556778888888999999999999998888777777
Q ss_pred ccHHHHHHHHHHhcCC--CCCceehhhhHHHH
Q 011647 442 EREEHLYKAFEYFDKD--NSTSQWKSWNMRLR 471 (480)
Q Consensus 442 ~~~~~~~~~F~~~D~d--~~G~i~~~e~~~~~ 471 (480)
.+++++..+++.+|.+ ++|.|+.+||.+.+
T Consensus 115 ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~ 146 (152)
T d1wdcc_ 115 LSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKV 146 (152)
T ss_dssp CCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCCCCEEEHHHHHHHH
Confidence 7888888888888864 45789988886654
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.74 E-value=1.6e-08 Score=82.36 Aligned_cols=89 Identities=10% Similarity=0.034 Sum_probs=67.4
Q ss_pred cCCCCCCcccHHHHhhhhcccC---CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCC
Q 011647 382 MDTDNSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458 (480)
Q Consensus 382 ~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~ 458 (480)
+|.+++|.|+.++|..++.... .....+++..+|+.+|.|++|.|+.+||..++.......+.+++..+|+.+|.|
T Consensus 46 ~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~- 124 (140)
T d1ggwa_ 46 IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK- 124 (140)
T ss_dssp HHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-
T ss_pred hhccccccccchhhhhhhhhhhhcchhhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-
Confidence 3567788888888887776432 233466778888888888888888888888877666667778888888888877
Q ss_pred CCceehhhhHHHH
Q 011647 459 STSQWKSWNMRLR 471 (480)
Q Consensus 459 ~G~i~~~e~~~~~ 471 (480)
+|.|+.+|+.+++
T Consensus 125 dG~I~y~eF~~~m 137 (140)
T d1ggwa_ 125 DGMVNYHDFVQMI 137 (140)
T ss_dssp SCCSTTTHHHHHH
T ss_pred CCEEeHHHHHHHH
Confidence 7888888877664
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.73 E-value=4.2e-09 Score=85.83 Aligned_cols=66 Identities=27% Similarity=0.490 Sum_probs=57.2
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHH
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 435 (480)
......+.++|+.+|.+++|+|+.+||+.++..+|..+++.+++.++.. |.|++|.|+|+||+.++
T Consensus 73 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred ccHHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 3344567889999999999999999999999999999999999999875 88999999999999875
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.70 E-value=6.4e-09 Score=78.89 Aligned_cols=62 Identities=24% Similarity=0.385 Sum_probs=56.7
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
..+.++|+.+|.+++|+|+.+|+..++...| ++.+++..++..+|.|++|.|+++||+.++.
T Consensus 11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 4577899999999999999999999999876 5789999999999999999999999998764
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.69 E-value=1.7e-08 Score=72.85 Aligned_cols=62 Identities=21% Similarity=0.181 Sum_probs=56.7
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 410 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
++..+|..+|.|++|.|+.+|+..++.......+.+++..+|+.+|.|++|.|+.+||..++
T Consensus 11 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m 72 (77)
T d1f54a_ 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72 (77)
T ss_dssp HHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 45667999999999999999999999888777889999999999999999999999998765
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.62 E-value=3e-08 Score=83.86 Aligned_cols=67 Identities=27% Similarity=0.370 Sum_probs=59.5
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
......++.+|..+|.|++|.|+.+||+.++..+| .+..+++.+|..+|.|++|+|+|+||+.++..
T Consensus 98 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 98 RVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 33345678899999999999999999999999876 57899999999999999999999999998765
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.61 E-value=1.2e-07 Score=85.88 Aligned_cols=88 Identities=18% Similarity=0.115 Sum_probs=63.3
Q ss_pred ccceeecceecccCCeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEEE
Q 011647 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 66 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~l 145 (480)
...|+..+..+.++.+.||+... .++.+++|+........ ...+.+|...+..+.++--+++++.+...++..++
T Consensus 13 ~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~---~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l 87 (263)
T d1j7la_ 13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred hhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccc---hhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence 34566666655566678998753 45668889875443222 23467888888888766557888988888999999
Q ss_pred EEecCCCCchHHH
Q 011647 146 IMDLCAGGELFDR 158 (480)
Q Consensus 146 v~e~~~~~~L~~~ 158 (480)
||++++|.++.+.
T Consensus 88 v~~~l~G~~~~~~ 100 (263)
T d1j7la_ 88 LMSEADGVLCSEE 100 (263)
T ss_dssp EEECCSSEEHHHH
T ss_pred EEEeccccccccc
Confidence 9999999877543
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.59 E-value=5.6e-08 Score=70.73 Aligned_cols=64 Identities=14% Similarity=0.116 Sum_probs=57.7
Q ss_pred HHHHHHHHhhcCCC-CcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 409 SEVRQLMEAADVDG-NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 409 ~~~~~~~~~~d~~~-~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
.+++.+|..+|.|+ +|.|+..|+..++..+....++++++..|+.+|.|++|.|+.+||..++.
T Consensus 15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 15 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 35666799999995 79999999999998888888999999999999999999999999988765
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.59 E-value=4.9e-09 Score=60.49 Aligned_cols=32 Identities=25% Similarity=0.261 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
++++++.||+.||+|++|+|+..|+++++..|
T Consensus 1 seeel~eAF~~FDkDg~G~Is~~EL~~vm~~l 32 (33)
T d2hf5a1 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL 32 (33)
T ss_dssp CHHHHHHHHHHHSSSCCSCBCHHHHHHHTTSC
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 36789999999999999999999999987654
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.52 E-value=2.4e-08 Score=85.44 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=57.6
Q ss_pred HHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 370 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
.....+..+|+.+|.|++|+|+.+||+.++..+|. +.++++.+|..+|.|++|.|+|+||..++.
T Consensus 102 ~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l--~~~~~~~~f~~~D~d~dG~i~~~EF~~~~~ 166 (185)
T d2sasa_ 102 WCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL--QCADVPAVYNVITDGGKVTFDLNRYKELYY 166 (185)
T ss_dssp THHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC--CCSSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC--CHHHHHHHHHHcCCCCCCCCcHHHHHHHHH
Confidence 33455788999999999999999999999998764 567899999999999999999999998864
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=7.9e-08 Score=72.91 Aligned_cols=62 Identities=11% Similarity=0.051 Sum_probs=50.2
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHccccc----------------cccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 411 VRQLMEAADVDGNGTIDYIEFITATMHMNR----------------VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 411 ~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~----------------~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
++.+|..+|.|++|.|+.+||..++..... ...++.+..+|+.+|+|+||.||.+|+.+..+
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~ 95 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 577999999999999999999998753210 11235688999999999999999999987653
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.49 E-value=5.6e-08 Score=82.19 Aligned_cols=66 Identities=21% Similarity=0.290 Sum_probs=58.0
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
......+..+|..+|.|++|.|+.+||..+++.++. +..+++.+|..+|.|++|.|+|+||+.++.
T Consensus 90 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~--~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 155 (174)
T d2scpa_ 90 SVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL--DKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CGGGHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh--hhHHHHHHHhhcCCCCCCcEeHHHHHHHHH
Confidence 344556789999999999999999999999998864 567889999999999999999999999864
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=3.2e-07 Score=68.78 Aligned_cols=62 Identities=11% Similarity=0.037 Sum_probs=53.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRS 472 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~ 472 (480)
+.++.+|..+|.|++|.|+.+|+..++... ..+.+.+..+|+.+|.|++|+|+.+||..++.
T Consensus 10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~--~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTT--TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHhc--CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 456779999999999999999999998654 35788999999999999999999999965543
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.5e-07 Score=68.78 Aligned_cols=63 Identities=13% Similarity=0.031 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHH
Q 011647 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRL 470 (480)
Q Consensus 408 ~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~ 470 (480)
...+..+|..+|.+++|.|+.+||..++.......+++++..+|+.+|.|++|.|+..|+...
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~ 81 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 81 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHH
Confidence 467888999999999999999999999988877889999999999999999999999988654
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.40 E-value=2.4e-07 Score=66.30 Aligned_cols=68 Identities=15% Similarity=0.051 Sum_probs=56.0
Q ss_pred CHHHHHHHHHhhcCC--CCcceeHHHHHHHHccccccc--cHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 407 SESEVRQLMEAADVD--GNGTIDYIEFITATMHMNRVE--REEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 407 ~~~~~~~~~~~~d~~--~~g~I~~~eF~~~~~~~~~~~--~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+.+++..+|..+|.+ ++|.|+.+|+..++....... ...++...|+.+|.|+||.|+.+||..++..+
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 568899999999654 479999999999987654332 34579999999999999999999999887654
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.39 E-value=8.1e-08 Score=55.27 Aligned_cols=31 Identities=32% Similarity=0.593 Sum_probs=28.8
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccC
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLG 403 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~ 403 (480)
++++++|+.||+|++|+|+..||+.+|+.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 4788999999999999999999999999876
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.39 E-value=3.2e-07 Score=67.17 Aligned_cols=69 Identities=23% Similarity=0.419 Sum_probs=55.2
Q ss_pred HHHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 370 EEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 370 ~~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
..+..+..+|..+. .+|+ +.|++.||+..+.. ++....+..++.+|...|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34456777888774 4454 47999999999987 3455567889999999999999999999999987543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.37 E-value=5e-07 Score=86.67 Aligned_cols=82 Identities=11% Similarity=0.149 Sum_probs=53.6
Q ss_pred cceecccCCeEEEEEEEcCCCceEEEEEecccccC----ChhcHHHHHHHHHHHHHccCC--CCeeEEEEEEEeCCeEEE
Q 011647 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI----NRDDVEDVRREVQIMHHLTGH--RNIVELKGAYEDRHSVNL 145 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~l~~l~~h--p~iv~~~~~~~~~~~~~l 145 (480)
.+.||.|....||++.+..+++.|+||........ -....++...|.+.|+.+..+ ..+++++.+ ++...++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 45789999999999998877889999975432111 111345667788888877543 346667654 4555678
Q ss_pred EEecCCCCch
Q 011647 146 IMDLCAGGEL 155 (480)
Q Consensus 146 v~e~~~~~~L 155 (480)
|||++.+..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987554
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.37 E-value=1.8e-07 Score=87.15 Aligned_cols=101 Identities=22% Similarity=0.252 Sum_probs=78.7
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHH-----------------------------HHHHHHHhhcCCCC
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES-----------------------------EVRQLMEAADVDGN 423 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~-----------------------------~~~~~~~~~d~~~~ 423 (480)
..+...|..+|.+++|.++..++...+...+...... .+..+|..+|.|++
T Consensus 188 ~~~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~ 267 (321)
T d1ij5a_ 188 AALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKS 267 (321)
T ss_dssp HTSCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSC
T ss_pred hhhhHHHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCC
Confidence 3456678888888888888888888877766543221 12235788899999
Q ss_pred cceeHHHHHHHHccccc-cccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 424 GTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 424 g~I~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
|.|+..||..++....- ..+.+.+...|+.+|+|+||.|+.+||.+++--
T Consensus 268 G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml~ 318 (321)
T d1ij5a_ 268 GQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (321)
T ss_dssp SSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999865542 456678999999999999999999999988753
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.29 E-value=9.2e-07 Score=65.73 Aligned_cols=58 Identities=14% Similarity=-0.122 Sum_probs=51.2
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHH
Q 011647 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMR 469 (480)
Q Consensus 410 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~ 469 (480)
..+.+|..+|.|++|.|+.+|+..++... ..+...+..+|+.+|.|++|+|+.+||.-
T Consensus 10 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~~--~l~~~~l~~i~~~~D~d~dG~l~~~EF~~ 67 (92)
T d1fi6a_ 10 YYVNQFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDGALTLDEFCA 67 (92)
T ss_dssp HHHHHHTTTCCSTTCEEEHHHHHHHHHHH--SSCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HHHHHHHHhCCCcccchhHHHHHHHHHHc--cCCHHHHHHHHHHhCCCCCCeecHHHHHH
Confidence 35568999999999999999999998754 36778999999999999999999999964
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.28 E-value=1.1e-06 Score=65.32 Aligned_cols=67 Identities=9% Similarity=0.004 Sum_probs=53.6
Q ss_pred HHHHHHHHhh-cCCCC-cceeHHHHHHHHcccc-----ccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 409 SEVRQLMEAA-DVDGN-GTIDYIEFITATMHMN-----RVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 409 ~~~~~~~~~~-d~~~~-g~I~~~eF~~~~~~~~-----~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+.+..+|..+ |.||+ |+|+.+||..++.... ...+.+.+...|+.+|.|+||.|+.+||..++..+-
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~ 82 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 3456677776 78875 9999999999876532 345678899999999999999999999987775553
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.28 E-value=4.5e-07 Score=67.24 Aligned_cols=66 Identities=8% Similarity=-0.079 Sum_probs=53.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccc-----cccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHM-----NRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
..+..+|..+|.| +|.|+.+||..++... ......+.+..+|+.+|.|+||.|+.+|+..+...+-
T Consensus 9 e~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~ 79 (92)
T d1a4pa_ 9 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 79 (92)
T ss_dssp HHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 3566788899987 8999999999998642 2234566899999999999999999999987765543
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.27 E-value=1.4e-06 Score=64.59 Aligned_cols=68 Identities=10% Similarity=-0.003 Sum_probs=53.7
Q ss_pred HHHHHHHHhh-cCCCC-cceeHHHHHHHHccc-----cccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHHH
Q 011647 409 SEVRQLMEAA-DVDGN-GTIDYIEFITATMHM-----NRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIWE 476 (480)
Q Consensus 409 ~~~~~~~~~~-d~~~~-g~I~~~eF~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~~ 476 (480)
..+..+|..+ |.|++ |+|+.+||..++... ....+++.+..+|+.+|.|+||.|+.+||..++..+..
T Consensus 9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~~ 83 (93)
T d3c1va1 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAM 83 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 3456678776 56654 479999999998652 34567889999999999999999999999887766543
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.26 E-value=5.1e-07 Score=66.68 Aligned_cols=68 Identities=19% Similarity=0.316 Sum_probs=54.3
Q ss_pred HHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 371 EIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 371 ~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
.+..+..+|..+. .+|+ +.|+..||+..|.. ++.......++.+|..+|.|+||.|+|+||+.++..+
T Consensus 7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 7 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 3455667787764 4454 57999999999986 4445567889999999999999999999999987543
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.18 E-value=1.7e-06 Score=65.17 Aligned_cols=65 Identities=9% Similarity=-0.007 Sum_probs=55.7
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
...+.+|..+|.|++|.|+.+|+..++... ..+.+.+..+|+.+|.|++|.|+.+||...+.-+.
T Consensus 11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s--~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li~ 75 (99)
T d1qjta_ 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKS--GLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVA 75 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHTS--SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHc--CCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHH
Confidence 356789999999999999999999998654 36788999999999999999999999976655443
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.15 E-value=2.5e-06 Score=76.33 Aligned_cols=75 Identities=11% Similarity=0.117 Sum_probs=52.5
Q ss_pred eecccC-CeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCC-CCeeEEEEEEEeCCeEEEEEecCC
Q 011647 74 ELGRGQ-FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDLCA 151 (480)
Q Consensus 74 ~lG~G~-~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~~~~~~~~~~~~~lv~e~~~ 151 (480)
.+..|. -+.||+.... .+..+++|...... ...+.+|...++.+..+ -.+++++.+..+++..++||++++
T Consensus 17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~ 89 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 89 (255)
T ss_dssp ECSCTTSSCEEEEEECT-TSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred EcCCcccCCeEEEEEeC-CCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence 444444 3678988764 46678889865432 13467788888777633 236778888888889999999998
Q ss_pred CCch
Q 011647 152 GGEL 155 (480)
Q Consensus 152 ~~~L 155 (480)
|.++
T Consensus 90 G~~~ 93 (255)
T d1nd4a_ 90 GQDL 93 (255)
T ss_dssp SEET
T ss_pred cccc
Confidence 8665
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=4.8e-06 Score=62.01 Aligned_cols=60 Identities=10% Similarity=-0.003 Sum_probs=51.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 409 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
+..+.+|..+| +++|.|+.+|+..++... ..+.+++..+|+..|.|++|+|+.+||.-.+
T Consensus 10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~--gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~ 69 (95)
T d2jxca1 10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNS--KLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69 (95)
T ss_dssp HHHHHHHHHTC-CBTTEEEHHHHHHHHTTS--SCCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCceeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCeEcHHHHHHHH
Confidence 34677999999 889999999999998754 3677899999999999999999999985433
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.13 E-value=7.9e-07 Score=63.75 Aligned_cols=69 Identities=14% Similarity=0.061 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHhhcC--CCCcceeHHHHHHHHccccc--cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 406 LSESEVRQLMEAADV--DGNGTIDYIEFITATMHMNR--VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 406 ~~~~~~~~~~~~~d~--~~~g~I~~~eF~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
...+++..+|+.+|. +++|+|+.+||..++..... ..+.+.+...|+.+|+|+||.|+.+||..++..+
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 356788999999974 34589999999999876422 2345568899999999999999999998887654
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.12 E-value=1.6e-06 Score=63.81 Aligned_cols=69 Identities=25% Similarity=0.409 Sum_probs=50.9
Q ss_pred HHHhhHHHhhcccC-CCCC-CcccHHHHhhhhcc-----cCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 370 EEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 370 ~~~~~~~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
..+..+..+|..+. .+++ +.+++.||+..+.. ++....+..++.++...|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34455677888774 3444 48999999999986 3444456789999999999999999999999987543
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.12 E-value=9.2e-07 Score=48.37 Aligned_cols=31 Identities=26% Similarity=0.148 Sum_probs=26.8
Q ss_pred cHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 443 REEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+++++-.+|+.||+|+||+|+.+|+..+.+.
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~ 32 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRA 32 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence 4678889999999999999999999887764
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.08 E-value=4.2e-06 Score=61.82 Aligned_cols=65 Identities=11% Similarity=-0.034 Sum_probs=52.8
Q ss_pred HHHHHHhh-cCCCCc-ceeHHHHHHHHccc-----cccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 411 VRQLMEAA-DVDGNG-TIDYIEFITATMHM-----NRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 411 ~~~~~~~~-d~~~~g-~I~~~eF~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+-.+|+.+ |.+|+| +|+.+||..++... ......+.+...++.+|.|+||.|+.+||..++..+.
T Consensus 11 i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~ 82 (93)
T d1ksoa_ 11 IVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC 82 (93)
T ss_dssp HHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 44466665 888898 69999999997642 3345678999999999999999999999988877664
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.03 E-value=1.6e-06 Score=47.46 Aligned_cols=31 Identities=32% Similarity=0.442 Sum_probs=26.4
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccC
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLG 403 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~ 403 (480)
+++.+.|+.||+|.||+|+.+||..+++..|
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 5677889999999999999999999887643
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.01 E-value=3.2e-06 Score=63.28 Aligned_cols=65 Identities=12% Similarity=0.070 Sum_probs=50.6
Q ss_pred HHHHHHHhh-cCCCC-cceeHHHHHHHHccccc--cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 410 EVRQLMEAA-DVDGN-GTIDYIEFITATMHMNR--VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 410 ~~~~~~~~~-d~~~~-g~I~~~eF~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
.+..+|+.+ |.||+ |+|+..||..++..... ..+.+.+...|+.+|.|+||.|+.+||..+...+
T Consensus 15 ~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 15 TVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 344466665 67765 99999999999875332 2345579999999999999999999998887654
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.96 E-value=6e-06 Score=63.23 Aligned_cols=62 Identities=10% Similarity=-0.170 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHH
Q 011647 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLR 471 (480)
Q Consensus 408 ~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~ 471 (480)
.+.++.+|..+|.|++|.|+.+|+..++... ..+.+.+..+|+..|.|++|+|+.+||.-++
T Consensus 21 ~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s--~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am 82 (110)
T d1iq3a_ 21 REYYVNQFRSLQPDPSSFISGSVAKNFFTKS--KLSIPELSYIWELSDADCDGALTLPEFCAAF 82 (110)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS--SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhHHHHHHHHHhh--ccchHHHHHHHHHhccCCCCeECHHHHHHHH
Confidence 4667789999999999999999999988653 3556679999999999999999999986433
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.92 E-value=1.7e-06 Score=72.39 Aligned_cols=96 Identities=8% Similarity=-0.004 Sum_probs=65.5
Q ss_pred hhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccccc----------c
Q 011647 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV----------E 442 (480)
Q Consensus 373 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~----------~ 442 (480)
..+..+|...|.+++|.|+.+||...+..+.. ..++..+|..+|.|++|.|+.+||..++...... .
T Consensus 45 ~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~---r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~ 121 (170)
T d2zkmx1 45 SACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPA 121 (170)
T ss_dssp HHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---CHHHHTTCC--------CCCHHHHHHHHHHTCC------------
T ss_pred HHHhhhhccccccCCCccCHHHHHHHHhccCC---HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccC
Confidence 45667899999999999999999999998854 3678899999999999999999999988654322 2
Q ss_pred cHHHHHHHHHHhcCCCC----CceehhhhHHHH
Q 011647 443 REEHLYKAFEYFDKDNS----TSQWKSWNMRLR 471 (480)
Q Consensus 443 ~~~~~~~~F~~~D~d~~----G~i~~~e~~~~~ 471 (480)
+.+.+...++.++.+.+ |.||.++|...+
T Consensus 122 ~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL 154 (170)
T d2zkmx1 122 RPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 154 (170)
T ss_dssp ---CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHccccccccCCeECHHHHHHHH
Confidence 44567788888887654 899999887743
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=97.90 E-value=1.3e-05 Score=58.61 Aligned_cols=65 Identities=8% Similarity=0.103 Sum_probs=51.5
Q ss_pred HHHHHHhh-cCCCCc-ceeHHHHHHHHcc---ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 411 VRQLMEAA-DVDGNG-TIDYIEFITATMH---MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 411 ~~~~~~~~-d~~~~g-~I~~~eF~~~~~~---~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+-.+|+.+ |.|++| +|+-.||..++.. .......+.+...++.+|.|+||.|+.+||..+...+-
T Consensus 11 ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~la 80 (89)
T d1k8ua_ 11 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA 80 (89)
T ss_dssp HHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 44466666 889888 7999999998764 23334557899999999999999999999988776553
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.88 E-value=1.2e-05 Score=57.59 Aligned_cols=65 Identities=22% Similarity=0.317 Sum_probs=50.0
Q ss_pred HhhHHHhhcccCC-CC-CCcccHHHHhhhhcc-cC----CC-CCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 372 IMGLKEMFKSMDT-DN-SGTITFEELKAGLPK-LG----TR-LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 372 ~~~~~~~F~~~D~-~~-~g~i~~~e~~~~l~~-~~----~~-~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
+..+-.+|..+.. +| .+.++..||+..+.. ++ .. ..+..++.++...|.|+||.|+|+||+.++.
T Consensus 9 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 9 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 4456677777753 33 358999999999986 32 22 3566799999999999999999999998764
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=97.76 E-value=6.9e-06 Score=61.77 Aligned_cols=63 Identities=17% Similarity=0.067 Sum_probs=48.2
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHccccc-------cccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 411 VRQLMEAADVDGNGTIDYIEFITATMHMNR-------VEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 411 ~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~-------~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+-.+|+.++ +++|.|+-.||..++..... ..+...+..+|+.+|.|+||.|+.+||..+...+
T Consensus 12 l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 12 MIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 334555554 78999999999998865332 1234568999999999999999999998776654
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=97.75 E-value=5e-05 Score=54.96 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=50.3
Q ss_pred HHHHHHhh-cCCCC-cceeHHHHHHHHcc-----ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 411 VRQLMEAA-DVDGN-GTIDYIEFITATMH-----MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 411 ~~~~~~~~-d~~~~-g~I~~~eF~~~~~~-----~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+-.+|+.+ +.+++ ++|+.+||..++.. .....+.+.+...|+.+|.|+||.|+.+||..+...+-
T Consensus 10 li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l~ 81 (87)
T d1e8aa_ 10 IVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIAL 81 (87)
T ss_dssp HHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence 44566666 44544 47999999999864 23345678899999999999999999999988776543
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=97.71 E-value=2.1e-05 Score=57.19 Aligned_cols=64 Identities=9% Similarity=-0.057 Sum_probs=49.4
Q ss_pred HHHHHHhh-cCCCCcc-eeHHHHHHHHcc-ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 411 VRQLMEAA-DVDGNGT-IDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 411 ~~~~~~~~-d~~~~g~-I~~~eF~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+-.+|+.+ |.||+|. ++.+||..++.. .....+.+.+...++.+|.|+||.|+.+||..+...+
T Consensus 12 ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 12 IIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 33455555 8888886 589999998765 3444455679999999999999999999998777654
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.51 E-value=1e-05 Score=62.60 Aligned_cols=74 Identities=8% Similarity=0.065 Sum_probs=56.7
Q ss_pred hhhhHHHHhhHHHhhcccC---CCCCCcccHHHHhhhhcccCC-C-CCHHHHHHHHHhhcCCCC--------cceeHHHH
Q 011647 365 ENLSEEEIMGLKEMFKSMD---TDNSGTITFEELKAGLPKLGT-R-LSESEVRQLMEAADVDGN--------GTIDYIEF 431 (480)
Q Consensus 365 ~~~~~~~~~~~~~~F~~~D---~~~~g~i~~~e~~~~l~~~~~-~-~~~~~~~~~~~~~d~~~~--------g~I~~~eF 431 (480)
.+++..+++.|.+.|+... ...+|.|+.++|+.++..+.. . ..+.-++.+|..+|.|++ |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 4578888888888886543 246789999999999887532 2 346788889999999876 88999999
Q ss_pred HHHHccc
Q 011647 432 ITATMHM 438 (480)
Q Consensus 432 ~~~~~~~ 438 (480)
+..+.-+
T Consensus 100 v~~LS~l 106 (118)
T d1tuza_ 100 SCYFSLL 106 (118)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9876543
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.40 E-value=7.3e-05 Score=57.62 Aligned_cols=87 Identities=11% Similarity=0.046 Sum_probs=64.1
Q ss_pred CCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhc------CCCCcceeHHHHHHHHccccc-c-ccHHHHHHHHHHhcC
Q 011647 385 DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD------VDGNGTIDYIEFITATMHMNR-V-EREEHLYKAFEYFDK 456 (480)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d------~~~~g~I~~~eF~~~~~~~~~-~-~~~~~~~~~F~~~D~ 456 (480)
+.++.|+.+++.+..+... ++..+++.+++.+. ...+|.|++++|..++..... . .+..-.+++|+.||+
T Consensus 3 ~~~s~l~p~~l~~L~~~T~--fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~ 80 (118)
T d1tuza_ 3 KERGLISPSDFAQLQKYME--YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFET 80 (118)
T ss_dssp CCCSCSCHHHHHHHHHHHH--HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCC
T ss_pred cccCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHcc
Confidence 4567899999999877754 34556667776662 235799999999999875433 2 346678899999999
Q ss_pred CCC--------CceehhhhHHHHHH
Q 011647 457 DNS--------TSQWKSWNMRLRSI 473 (480)
Q Consensus 457 d~~--------G~i~~~e~~~~~~~ 473 (480)
|++ |.|+..|+.....-
T Consensus 81 ~~d~~~~~~~~g~I~f~efv~~LS~ 105 (118)
T d1tuza_ 81 GHCLNETNVTKDVVCLNDVSCYFSL 105 (118)
T ss_dssp CCCTTCCCCCSCCEEHHHHHHHHHH
T ss_pred ccccccccCCCceeeHHHHHHHHHH
Confidence 987 88998877654443
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.37 E-value=0.00031 Score=66.66 Aligned_cols=75 Identities=11% Similarity=0.120 Sum_probs=52.8
Q ss_pred cceecccCCeEEEEEEEcC-------CCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCeeEEEEEEEeCCeEE
Q 011647 72 GRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (480)
Q Consensus 72 ~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~~~~~~~~~~~~~ 144 (480)
++.|+.|-.-.+|++.... .++.|.+++.-.. .......+|..+++.+..+.-.+++++++.. .
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-----~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-----chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 4689999999999998753 2456777776421 1223456899999988766555688887642 5
Q ss_pred EEEecCCCCch
Q 011647 145 LIMDLCAGGEL 155 (480)
Q Consensus 145 lv~e~~~~~~L 155 (480)
+||||++|..|
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 89999988544
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.00091 Score=61.49 Aligned_cols=69 Identities=10% Similarity=0.135 Sum_probs=45.3
Q ss_pred CeEEEEEEEcCCCceEEEEEecccccCChhcHHHHHHHHHHHHHccCCCCe--eEEE-----EEEEeCCeEEEEEecCCC
Q 011647 80 FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI--VELK-----GAYEDRHSVNLIMDLCAG 152 (480)
Q Consensus 80 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~i--v~~~-----~~~~~~~~~~lv~e~~~~ 152 (480)
--.||++... +|..|++|+..+.. ...+.+..|...+..|..+ ++ +..+ ..+..++..+.+++++.|
T Consensus 35 EN~vy~v~~~-dg~~~VlK~~rp~~----~s~~~i~~E~~~l~~L~~~-gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G 108 (325)
T d1zyla1 35 ENRVYQFQDE-DRRRFVVKFYRPER----WTADQILEEHQFALQLVND-EVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 108 (325)
T ss_dssp SSEEEEECCT-TCCCEEEEEECTTT----SCHHHHHHHHHHHHHHHHT-TCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred cceeEEEEcC-CCCEEEEEEeCCCC----CCHHHHHHHHHHHHHHHhc-CCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence 4679998874 57889999986532 1246678888888887622 22 1111 123456778899999987
Q ss_pred Cc
Q 011647 153 GE 154 (480)
Q Consensus 153 ~~ 154 (480)
..
T Consensus 109 ~~ 110 (325)
T d1zyla1 109 RQ 110 (325)
T ss_dssp EE
T ss_pred cC
Confidence 43
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.14 E-value=0.00012 Score=58.15 Aligned_cols=58 Identities=21% Similarity=0.212 Sum_probs=48.9
Q ss_pred hhcccCCC-CCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcc
Q 011647 378 MFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (480)
Q Consensus 378 ~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 437 (480)
.|..+|.| +||.|+..|++.+...+ -+.+.-+..++..+|.|+||.|++.|+..++.-
T Consensus 82 ~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v 140 (151)
T d1sraa_ 82 QFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 140 (151)
T ss_dssp HHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred ehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCC
Confidence 39999999 59999999999976544 234566888999999999999999999998753
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=97.05 E-value=0.00088 Score=48.83 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=48.0
Q ss_pred HHHHHhh-cCCCC-cceeHHHHHHHHcc-----ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 412 RQLMEAA-DVDGN-GTIDYIEFITATMH-----MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 412 ~~~~~~~-d~~~~-g~I~~~eF~~~~~~-----~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
-.+|..+ ..+|+ ++++..||..++.. .......+.+...|+.+|.|+||.|+.+|+..+...+-
T Consensus 12 i~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la 82 (95)
T d1qlsa_ 12 IAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA 82 (95)
T ss_dssp HHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 3355554 33443 67999999999875 23344567899999999999999999999977765553
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=97.03 E-value=0.0015 Score=47.12 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=48.7
Q ss_pred HHHHHHhh-cCCCC-cceeHHHHHHHHcc-----ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHHH
Q 011647 411 VRQLMEAA-DVDGN-GTIDYIEFITATMH-----MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSIIW 475 (480)
Q Consensus 411 ~~~~~~~~-d~~~~-g~I~~~eF~~~~~~-----~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~~ 475 (480)
+-.+|+.+ ..+|+ ++++..||..++.. .......+.+...|+.+|.|+||.|+.+|+..+...+.
T Consensus 11 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~la 82 (90)
T d3cr5x1 11 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 82 (90)
T ss_dssp HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 33456655 34444 57999999999865 23345567899999999999999999999977765543
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=96.44 E-value=0.0038 Score=45.27 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=44.4
Q ss_pred HHHHHHhhc-CCC-CcceeHHHHHHHHcc-----ccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 411 VRQLMEAAD-VDG-NGTIDYIEFITATMH-----MNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 411 ~~~~~~~~d-~~~-~g~I~~~eF~~~~~~-----~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
+-.+|..+. .+| .++++..||..++.. .......+.+...|+.+|.|+||.|+.+|+..+.-.+
T Consensus 11 ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 11 IIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 344566653 333 358999999999864 2223345679999999999999999999987665544
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=95.92 E-value=0.018 Score=40.38 Aligned_cols=63 Identities=11% Similarity=0.007 Sum_probs=46.1
Q ss_pred HHHHHHhhc-CC-CCcceeHHHHHHHHccc-----ccc-ccHHHHHHHHHHhcCCCCCceehhhhHHHHHH
Q 011647 411 VRQLMEAAD-VD-GNGTIDYIEFITATMHM-----NRV-EREEHLYKAFEYFDKDNSTSQWKSWNMRLRSI 473 (480)
Q Consensus 411 ~~~~~~~~d-~~-~~g~I~~~eF~~~~~~~-----~~~-~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~ 473 (480)
+-.+|+.+. .+ ..++++..||..++... ... .....+...|+.+|.|+||.|+.+|+..+...
T Consensus 12 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 12 IINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 334566663 23 34689999999997642 122 34567999999999999999999999877654
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.60 E-value=0.0081 Score=54.46 Aligned_cols=31 Identities=32% Similarity=0.435 Sum_probs=25.5
Q ss_pred cCCeecCCCCcceecccCCCCCCeeEeeccccee
Q 011647 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (480)
Q Consensus 187 ~~ivH~Dlkp~Nil~~~~~~~~~ikl~Dfg~a~~ 220 (480)
.|+||+|+.++||+++ .+...-|+||+.+..
T Consensus 183 ~giIHgDl~~dNvl~~---~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFL---GDELSGLIDFYFACN 213 (316)
T ss_dssp EEEECSCCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred cccccCCcchhhhhcc---cccceeEeccccccc
Confidence 5799999999999995 344568999998864
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=95.18 E-value=0.02 Score=36.91 Aligned_cols=71 Identities=23% Similarity=0.301 Sum_probs=57.4
Q ss_pred hhHHHHhhHHHhhcccCCCCCCcccHHHHhhhhcccCCCCCHHHHHHHHHhhc-CCC-CcceeHHHHHHHHcc
Q 011647 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD-VDG-NGTIDYIEFITATMH 437 (480)
Q Consensus 367 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~~-~g~I~~~eF~~~~~~ 437 (480)
+..++.++-.++|++||+|....-...+-..+|.++|+..+..+.+.++...- ..+ ...|.-+|++.++.+
T Consensus 8 lgpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcsk 80 (86)
T d1j7qa_ 8 LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK 80 (86)
T ss_dssp CSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence 45677788899999999999888888999999999999999999998887762 222 234888899887654
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.91 E-value=0.0056 Score=48.21 Aligned_cols=59 Identities=17% Similarity=0.051 Sum_probs=47.5
Q ss_pred HHHHHHHHhhcCC-CCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHH
Q 011647 409 SEVRQLMEAADVD-GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMR 469 (480)
Q Consensus 409 ~~~~~~~~~~d~~-~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~ 469 (480)
--+.++|..+|.| .||.++..|...+...+ ...+..++..|+..|.|+||.||..|...
T Consensus 77 ~~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~ 136 (151)
T d1sraa_ 77 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAG 136 (151)
T ss_dssp HHHHHHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred ccceeehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHH
Confidence 3577899999999 59999999987764322 23455688999999999999999998754
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.75 E-value=0.18 Score=36.02 Aligned_cols=63 Identities=13% Similarity=0.144 Sum_probs=46.0
Q ss_pred hHHHhhcccCCCCCCcccHHHHhhhhcccC--CCCCHHHHHHHHHhhcCCC----CcceeHHHHHHHHcc
Q 011647 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLG--TRLSESEVRQLMEAADVDG----NGTIDYIEFITATMH 437 (480)
Q Consensus 374 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~--~~~~~~~~~~~~~~~d~~~----~g~I~~~eF~~~~~~ 437 (480)
++..+|..+-.+ .+.|+.++|...|..-. ...+...+..++..+..+. .+.+++++|..++..
T Consensus 9 ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S 77 (94)
T d1qasa1 9 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 77 (94)
T ss_dssp HHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred HHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence 355666666433 46799999999998853 2457777888999987653 367999999998754
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=86.92 E-value=0.94 Score=32.55 Aligned_cols=69 Identities=7% Similarity=0.068 Sum_probs=52.0
Q ss_pred HHHHhhHHHhhcccCCCCCCcccHHHHhhhhcc---c-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHccc
Q 011647 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK---L-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (480)
Q Consensus 369 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~---~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 438 (480)
..++....+.|..|-.-..-.++...|..+++. + +...+..+++.+|..+-..+ .+|+|++|..++..+
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~l 76 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFV 76 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHH
Confidence 345666677777775322236999999999987 3 35799999999999996554 569999999987543
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=86.92 E-value=0.34 Score=31.12 Aligned_cols=48 Identities=27% Similarity=0.401 Sum_probs=23.0
Q ss_pred CCCCCCcccHHHHhhhhccc-CC-CCCHHHHHHHHHhhcCCCCcceeHHHHHHH
Q 011647 383 DTDNSGTITFEELKAGLPKL-GT-RLSESEVRQLMEAADVDGNGTIDYIEFITA 434 (480)
Q Consensus 383 D~~~~g~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~ 434 (480)
|.|+||.|+..++..+...+ +. .+++.+ +...|.|+||.|+..++..+
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~~----~~aaDvn~Dg~i~i~D~~~l 51 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTDDA----KARADVDKNGSINAADVLLL 51 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHHH----HHHHCTTCSSCCSHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCChhh----hhccccCCCCCCCHHHHHHH
Confidence 44556666666555555442 21 222221 34445555555555555443
|
| >d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Protein cgi-38 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=85.52 E-value=2.3 Score=32.32 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=55.9
Q ss_pred HHHhhcccCCC-CCC-cccHHHHhhhhccc---C-CCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHcccc-----cccc
Q 011647 375 LKEMFKSMDTD-NSG-TITFEELKAGLPKL---G-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-----RVER 443 (480)
Q Consensus 375 ~~~~F~~~D~~-~~g-~i~~~e~~~~l~~~---~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~-----~~~~ 443 (480)
....|..|..- .+| .|+...|..+++.. + ..++..+++.+|..+-.-+.-.|+|++|+.++..+. ....
T Consensus 13 ~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~iA~kk~~~~s~ 92 (138)
T d1wlma1 13 SFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKGKSK 92 (138)
T ss_dssp HHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTHHHHSSSCCH
T ss_pred HHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhcCCccH
Confidence 33445555432 233 58999999999874 3 468999999999998766777899999998876442 1223
Q ss_pred HHHHHHHHHHhc
Q 011647 444 EEHLYKAFEYFD 455 (480)
Q Consensus 444 ~~~~~~~F~~~D 455 (480)
++.+..+.+.+-
T Consensus 93 ~e~~~~i~~~i~ 104 (138)
T d1wlma1 93 EEAFDAICQLIA 104 (138)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 455666666654
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=84.11 E-value=0.59 Score=29.91 Aligned_cols=54 Identities=22% Similarity=0.163 Sum_probs=39.0
Q ss_pred cCCCCcceeHHHHHHHHccccccccHHHHHHHHHHhcCCCCCceehhhhHHHHHHH
Q 011647 419 DVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSTSQWKSWNMRLRSII 474 (480)
Q Consensus 419 d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~~~~~ 474 (480)
|.|+||.|+..+...+.........- -...|...|.|+||.|+..++..+.+-+
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~--~~~~~~aaDvn~Dg~i~i~D~~~l~~~I 55 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITL--TDDAKARADVDKNGSINAADVLLLSRYL 55 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCC--CHHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCC--ChhhhhccccCCCCCCCHHHHHHHHHHH
Confidence 67899999999998875432211110 1224678999999999999988887754
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.94 E-value=0.88 Score=32.19 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHccccc--cccHHHHHHHHHHhcCCC----CCceehhhhHHH
Q 011647 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNR--VEREEHLYKAFEYFDKDN----STSQWKSWNMRL 470 (480)
Q Consensus 408 ~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~--~~~~~~~~~~F~~~D~d~----~G~i~~~e~~~~ 470 (480)
-.+|+.+|..+-.+ .+.|+.++|...+..... ...++.+..+|..|..+. .|.+|.+.|...
T Consensus 7 R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~f 74 (94)
T d1qasa1 7 RAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMY 74 (94)
T ss_dssp CHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHH
T ss_pred cHHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHH
Confidence 36889999999654 467999999999876433 346777889999998764 377998876544
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=83.46 E-value=0.11 Score=35.05 Aligned_cols=49 Identities=12% Similarity=0.198 Sum_probs=33.6
Q ss_pred CCCCCCcccHHHHhhhhccc-CCCCCHHHHHHHHHhhcCCCCcceeHHHHHHHHc
Q 011647 383 DTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (480)
Q Consensus 383 D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 436 (480)
|.|+||.|+..++..+++.+ +.. +..+ +...|.|+||+|+..++..+..
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~-~~~~----~~~aDvn~DG~Id~~D~~~l~~ 57 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSG-ISIN----TDNADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSC-SCCC----GGGTCSSSSSSCSSHHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCC-CcCC----CcceecCCCCCcCHHHHHHHHH
Confidence 77888999888888877764 322 1111 1246888888888888877643
|