Query 011649
Match_columns 480
No_of_seqs 344 out of 1738
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:30:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011649.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011649hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.1E-63 7.1E-68 516.0 27.8 349 114-477 5-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.5E-59 8.4E-64 484.8 28.8 343 116-480 8-395 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 3.3E-56 1.1E-60 458.1 28.6 329 118-478 3-373 (381)
4 3psg_A Pepsinogen; hydrolase(a 100.0 2.8E-56 9.7E-61 456.6 27.3 303 118-478 46-370 (370)
5 1mpp_A Pepsin; hydrolase(acid 100.0 3.7E-56 1.3E-60 454.6 25.8 312 116-480 6-357 (361)
6 1tzs_A Cathepsin E; hydrolase, 100.0 1E-55 3.5E-60 449.7 27.5 306 118-480 13-344 (351)
7 1j71_A Candidapepsin, aspartic 100.0 3.6E-56 1.2E-60 450.0 22.7 298 117-480 2-326 (334)
8 3fv3_A SAPP1P-secreted asparti 100.0 1.1E-55 3.9E-60 447.1 26.4 300 118-480 3-331 (339)
9 3cms_A Chymosin B; hydrolase, 100.0 8E-56 2.7E-60 445.4 23.4 301 118-478 4-323 (323)
10 2qzx_A Candidapepsin-5; aspart 100.0 1E-55 3.4E-60 448.1 23.6 299 118-480 3-333 (342)
11 2apr_A Rhizopuspepsin; hydrola 100.0 1.3E-55 4.4E-60 444.3 24.0 294 128-478 13-324 (325)
12 1dpj_A Proteinase A; proteinas 100.0 2.3E-55 7.8E-60 443.2 25.6 302 118-478 3-329 (329)
13 1am5_A Pepsin, acid proteinase 100.0 3E-55 1E-59 441.4 26.0 300 119-478 3-324 (324)
14 2x0b_A Renin; hydrolase-hormon 100.0 5.6E-56 1.9E-60 455.7 20.7 303 118-478 51-383 (383)
15 3c9x_A Trichoderma reesei aspa 100.0 2.9E-55 9.9E-60 442.5 25.4 297 128-477 13-329 (329)
16 1oew_A Endothiapepsin; hydrola 100.0 5.1E-55 1.7E-59 440.7 24.6 296 128-477 13-329 (329)
17 1htr_B Gastricsin; aspartyl pr 100.0 7.4E-55 2.5E-59 439.4 22.8 302 119-478 4-329 (329)
18 2ewy_A Beta-secretase 2; BACE2 100.0 3.7E-54 1.3E-58 443.1 25.8 311 128-480 11-357 (383)
19 4aa9_A Chymosin; hydrolase, as 100.0 1.2E-54 4.2E-59 436.1 21.5 293 128-478 9-320 (320)
20 3pvk_A Candidapepsin-2; hydrol 100.0 2.2E-54 7.7E-59 438.0 23.0 300 118-480 3-333 (342)
21 1miq_A Plasmepsin; aspartic pr 100.0 2.3E-54 7.7E-59 443.2 23.2 299 118-478 52-374 (375)
22 1qdm_A Prophytepsin; aspartic 100.0 1.6E-53 5.5E-58 449.0 29.5 317 118-478 42-478 (478)
23 2qp8_A Beta-secretase 1; BACE1 100.0 7.9E-54 2.7E-58 442.5 24.6 310 128-480 19-369 (395)
24 2bju_A Plasmepsin II; aspartic 100.0 5.3E-54 1.8E-58 448.6 23.2 300 118-478 128-450 (453)
25 3k1w_A Renin; protease, altern 100.0 6.3E-54 2.2E-58 434.5 21.0 305 116-478 6-340 (341)
26 3vf3_A Beta-secretase 1; struc 100.0 3.8E-53 1.3E-57 438.3 25.9 314 128-480 26-376 (402)
27 3lpj_A Beta-secretase 1; alzhe 100.0 6.5E-53 2.2E-57 443.3 24.8 313 128-480 72-422 (455)
28 1yg9_A Aspartic protease BLA G 100.0 4.2E-53 1.4E-57 426.8 21.2 302 118-478 7-329 (330)
29 1izd_A Aspartic proteinase; su 100.0 5.4E-53 1.8E-57 424.8 21.3 293 128-478 13-323 (323)
30 3qvc_A Histo-aspartic protease 100.0 9.8E-53 3.3E-57 439.4 23.7 299 118-478 127-449 (451)
31 1ibq_A Aspergillopepsin; aspar 100.0 1.7E-52 5.9E-57 421.5 24.5 294 128-478 12-325 (325)
32 1wkr_A Polyporopepsin; hydrola 100.0 2.6E-52 8.7E-57 422.8 24.5 297 118-480 3-335 (340)
33 1bxo_A Protein (penicillopepsi 100.0 7.1E-53 2.4E-57 423.9 19.8 292 128-478 13-323 (323)
34 1b5f_A Protein (cardosin A); h 100.0 6.4E-42 2.2E-46 329.7 15.2 218 119-379 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.1E-35 3.9E-40 286.2 17.1 212 247-478 6-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.7E-22 5.8E-27 166.2 8.5 89 119-237 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 1.2E-15 4.1E-20 122.7 7.9 77 401-478 6-87 (87)
38 2i1a_A DNA damage-inducible pr 91.2 1.4 4.7E-05 37.6 10.0 26 450-475 109-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 91.0 0.76 2.6E-05 39.7 8.1 108 327-476 24-134 (148)
40 1fmb_A EIAV protease; hydrolas 80.7 1.5 5.2E-05 35.4 4.0 25 133-159 10-34 (104)
41 2hs1_A HIV-1 protease; ultra-h 80.4 1.9 6.6E-05 34.4 4.5 28 133-162 10-37 (99)
42 3ec0_A Protease; HIV-2, inhibi 75.7 3.2 0.00011 33.1 4.4 28 133-162 10-37 (99)
43 2i1a_A DNA damage-inducible pr 72.6 3.1 0.00011 35.3 4.0 31 128-160 23-53 (148)
44 3liy_A Protease; hydrolase, hy 71.8 3.4 0.00012 33.7 3.8 31 133-163 12-45 (116)
45 2hah_A Protease, retropepsin; 68.6 4.3 0.00015 33.4 3.8 26 133-161 16-41 (116)
46 1lya_A Cathepsin D; lysosomal 63.9 11 0.00038 29.5 5.3 40 316-368 5-44 (97)
47 3sqf_A Protease; folded monome 62.5 7.3 0.00025 31.8 4.0 29 133-163 11-39 (114)
48 3s8i_A Protein DDI1 homolog 1; 58.0 8.2 0.00028 33.0 3.8 32 128-161 21-52 (148)
49 3slz_A GAG-Pro-POL polyprotein 47.1 21 0.00072 29.9 4.5 30 131-162 22-51 (132)
50 2rsp_A RSV protease; hydrolase 46.0 19 0.00065 29.8 4.0 23 138-162 27-49 (124)
51 1bxo_A Protein (penicillopepsi 45.3 19 0.00065 34.6 4.6 41 312-369 5-45 (323)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.6 18 0.0006 32.7 3.8 26 133-160 10-35 (203)
53 1mpp_A Pepsin; hydrolase(acid 41.8 34 0.0012 33.3 5.9 44 310-368 4-49 (361)
54 1izd_A Aspartic proteinase; su 41.1 23 0.0008 34.0 4.5 40 313-369 6-45 (323)
55 1ibq_A Aspergillopepsin; aspar 39.7 23 0.00077 34.1 4.1 32 325-369 13-44 (325)
56 3cms_A Chymosin B; hydrolase, 38.7 39 0.0013 32.3 5.7 44 312-368 2-45 (323)
57 1b5f_A Protein (cardosin A); h 33.1 45 0.0015 30.4 4.9 40 316-368 5-44 (239)
58 3aup_A SBG7S, BG, basic 7S glo 29.3 60 0.0021 32.1 5.4 42 315-368 11-52 (403)
59 1oew_A Endothiapepsin; hydrola 27.5 48 0.0016 31.8 4.1 31 325-368 14-46 (329)
60 1wkr_A Polyporopepsin; hydrola 26.8 69 0.0024 30.7 5.2 39 315-367 4-42 (340)
61 1am5_A Pepsin, acid proteinase 26.4 80 0.0027 30.0 5.6 40 316-368 4-43 (324)
62 2apr_A Rhizopuspepsin; hydrola 26.3 60 0.0021 31.0 4.6 31 325-368 14-46 (325)
63 3k1w_A Renin; protease, altern 26.0 82 0.0028 30.1 5.6 44 312-368 6-49 (341)
64 3c9x_A Trichoderma reesei aspa 25.7 54 0.0018 31.4 4.1 32 325-369 14-47 (329)
65 3ka2_A [L-Ala51;Gly51']HIV-1 p 25.5 56 0.0019 29.4 3.8 27 133-161 114-140 (203)
66 1j71_A Candidapepsin, aspartic 25.5 85 0.0029 30.0 5.6 39 316-368 5-43 (334)
67 3fv3_A SAPP1P-secreted asparti 25.2 86 0.0029 29.9 5.6 40 315-368 4-43 (339)
68 2qzx_A Candidapepsin-5; aspart 25.1 93 0.0032 29.8 5.8 40 315-368 4-43 (342)
69 1dpj_A Proteinase A; proteinas 24.4 87 0.003 29.8 5.4 41 315-368 4-44 (329)
70 3vla_A EDGP; extracellular, in 23.5 70 0.0024 31.9 4.6 45 311-367 6-50 (413)
71 3pvk_A Candidapepsin-2; hydrol 22.0 93 0.0032 29.7 5.1 33 325-368 11-43 (342)
72 1fmb_A EIAV protease; hydrolas 21.9 88 0.003 24.8 4.0 31 332-372 10-40 (104)
73 3slz_A GAG-Pro-POL polyprotein 21.3 73 0.0025 26.5 3.5 24 334-367 26-49 (132)
74 4aa9_A Chymosin; hydrolase, as 21.2 71 0.0024 30.2 4.0 33 325-368 10-42 (320)
75 2hah_A Protease, retropepsin; 20.7 83 0.0028 25.6 3.6 30 327-367 11-40 (116)
76 2hs1_A HIV-1 protease; ultra-h 20.2 89 0.0031 24.6 3.6 27 331-367 9-35 (99)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.1e-63 Score=516.01 Aligned_cols=349 Identities=22% Similarity=0.373 Sum_probs=286.9
Q ss_pred cCcceeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCcccc
Q 011649 114 KTKAFTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCK 193 (480)
Q Consensus 114 ~~~~~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~ 193 (480)
..+++.+|++... .+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.++|.++.|.
T Consensus 5 ~~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~ 70 (413)
T 3vla_A 5 RPSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCS 70 (413)
T ss_dssp CCSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHH
T ss_pred CCccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccc
Confidence 3557889998743 689999999999999999999999999999999976 37999999999999998
Q ss_pred ccccCCC----CCCCCCCCCCCCcceeee-cCCCcEEEEEEEEEEEEeecCCCc---ccccCCeEEEEEecC--CCCCCC
Q 011649 194 ILLEWFP----PNGQDKCSSKECPYDIAY-VDGSGETGFWATDRMTIQEVNGNG---YFARYPFLLGCTDNN--TGDQNG 263 (480)
Q Consensus 194 ~~~~~~~----~~~~~~C~~~~c~y~~~Y-gdgs~~~G~~~~Dtltl~~~~~~~---~~~~~~~~FGc~~~~--~g~~~~ 263 (480)
....... ......|.++.|.|.+.| +|++.+.|++++|+|+|++.+.+. .+.++++.|||++.+ .+.+..
T Consensus 71 ~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~ 150 (413)
T 3vla_A 71 LSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASG 150 (413)
T ss_dssp HTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTT
T ss_pred ccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccc
Confidence 7652000 001235666779999999 588789999999999998532210 123389999999986 455678
Q ss_pred CCceeecCCCCccceeecccc-----eeEEEecCCCCCceeEEeCCCCC-c-----CCCC-cEEeeceeCCCC-------
Q 011649 264 ASGIMGLDRGPVSIISKTNIS-----YFFYCLHSPYGSTGYITFGKPDT-V-----NKKF-VKYTPIVTTPEQ------- 324 (480)
Q Consensus 264 ~~GilGLg~~~~Sl~sQl~~~-----~FS~cL~~~~~~~G~L~fGg~d~-~-----~~~~-~~~tpl~~~~~~------- 324 (480)
++||||||++++|+++|+..+ .|||||++.....|.|+||+.|. . +.++ +.||||+.++..
T Consensus 151 ~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~ 230 (413)
T 3vla_A 151 VVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQ 230 (413)
T ss_dssp CCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCT
T ss_pred cccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccc
Confidence 999999999999999998863 29999998655689999999875 2 4667 999999986532
Q ss_pred ---CeeEEEEEeeEEEcceEeecCccccC-----CCCEEEecCCcceeccHHHHHHHHHHHHHHhh--hccCCCCccccc
Q 011649 325 ---SEFYHITLTGISVGGERLPLKASYFT-----KLSTEIDSGTIITRFPAPVYSALRSAFRKRMK--KYKMGKGIEDLF 394 (480)
Q Consensus 325 ---~~~y~v~l~gIsVgg~~l~i~~~~~~-----~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~--~~~~~~~~~~~~ 394 (480)
..+|+|+|++|+||++.+.+++..|. .+++||||||++|+||+++|++|+++|.+++. +++...+. ..+
T Consensus 231 ~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~-~~~ 309 (413)
T 3vla_A 231 GEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASV-APF 309 (413)
T ss_dssp TCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCC-TTC
T ss_pred cCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCC-CCC
Confidence 27999999999999999998877663 36899999999999999999999999999875 34444333 567
Q ss_pred ccceecCCCcc----cccceEEEEEcC-CcEEEecCCCeEEEeCCCeEEEEEEeCCCC-CCeeeechhhhceeEEEEeCC
Q 011649 395 DTCYDLSAYKT----VVVPKITIHFLG-GVDLELDVRGTLVVESVRQVCLGFALLPSD-PNSILLGNVQQRGYEVHYDVA 468 (480)
Q Consensus 395 ~~C~~~~~~~~----~~~P~i~~~f~g-g~~~~l~~~~~~~~~~~~~~Cl~~~~~~~~-~~~~IlG~~f~~~~~vvfD~~ 468 (480)
+.||+.++... ..+|+|+|+|+| +++|+|++++|+++.+++..|++|...... .+.||||++|||++|+|||++
T Consensus 310 ~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~ 389 (413)
T 3vla_A 310 GACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLA 389 (413)
T ss_dssp SCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETT
T ss_pred cceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECC
Confidence 89999876432 579999999987 589999999999987667899998876432 257999999999999999999
Q ss_pred CCEEEEeeC
Q 011649 469 GRRLGFGPG 477 (480)
Q Consensus 469 ~~riGFa~~ 477 (480)
++|||||++
T Consensus 390 ~~riGfa~~ 398 (413)
T 3vla_A 390 TSRVGFSGT 398 (413)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.5e-59 Score=484.84 Aligned_cols=343 Identities=21% Similarity=0.326 Sum_probs=271.8
Q ss_pred cceeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 116 KAFTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 116 ~~~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
+.+.+|++.. ..+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.++|.++.|...
T Consensus 8 ~~~~~pl~~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~ 73 (403)
T 3aup_A 8 NLVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRA 73 (403)
T ss_dssp CCEEEEEEEC-TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHT
T ss_pred ccEEEeeecC-CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCc
Confidence 4567888842 1678999999999999999999999999999999875 3799999999999999876
Q ss_pred ccCCC------CCCCCCCCCCCCcceeeec-CCCcEEEEEEEEEEEEeecCCCc-----ccccCCeEEEEEecCC---CC
Q 011649 196 LEWFP------PNGQDKCSSKECPYDIAYV-DGSGETGFWATDRMTIQEVNGNG-----YFARYPFLLGCTDNNT---GD 260 (480)
Q Consensus 196 ~~~~~------~~~~~~C~~~~c~y~~~Yg-dgs~~~G~~~~Dtltl~~~~~~~-----~~~~~~~~FGc~~~~~---g~ 260 (480)
.. + ......|.+..|.|.+.|+ |++.+.|.+++|+|+|++..... .+.++++.|||++... +.
T Consensus 74 ~~--~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~ 151 (403)
T 3aup_A 74 NT--HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL 151 (403)
T ss_dssp TC--CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSS
T ss_pred cc--cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCC
Confidence 53 1 1112356667899999998 78789999999999998732100 0222899999999874 33
Q ss_pred CCCCCceeecCCCCccceeecccc-----eeEEEecCCCCCceeEEeCCCCC-cC--C-C-----CcEEeeceeCCCCCe
Q 011649 261 QNGASGIMGLDRGPVSIISKTNIS-----YFFYCLHSPYGSTGYITFGKPDT-VN--K-K-----FVKYTPIVTTPEQSE 326 (480)
Q Consensus 261 ~~~~~GilGLg~~~~Sl~sQl~~~-----~FS~cL~~~~~~~G~L~fGg~d~-~~--~-~-----~~~~tpl~~~~~~~~ 326 (480)
+...+||||||++++|+++|++.. .||+||++.....|.|+||+ |+ ++ . + ++.|+|++.++ ..
T Consensus 152 ~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~ 228 (403)
T 3aup_A 152 PRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QG 228 (403)
T ss_dssp STTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TS
T ss_pred CCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC--CC
Confidence 467899999999999999998653 29999998655689999999 76 55 3 4 89999999854 36
Q ss_pred eEEEEEeeEEEcceEe-ecCccccC-----CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceec
Q 011649 327 FYHITLTGISVGGERL-PLKASYFT-----KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDL 400 (480)
Q Consensus 327 ~y~v~l~gIsVgg~~l-~i~~~~~~-----~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~ 400 (480)
+|+|.|++|+||++.+ .++...+. .+++||||||++++||+++|++|+++|.+++..++..... ..++.||+.
T Consensus 229 ~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~c~~c 307 (403)
T 3aup_A 229 EYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSV-APFGLCFNS 307 (403)
T ss_dssp CEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCC-TTCSCEECG
T ss_pred cceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCC-CCCCceEEC
Confidence 9999999999999998 77766552 3679999999999999999999999998876544433322 345578764
Q ss_pred CCCcccccceEEEEEcCC--cEEEecCCCeEEEeCCCeEEEEEEeCCCC-CCeeeechhhhceeEEEEeCCCCEEEE---
Q 011649 401 SAYKTVVVPKITIHFLGG--VDLELDVRGTLVVESVRQVCLGFALLPSD-PNSILLGNVQQRGYEVHYDVAGRRLGF--- 474 (480)
Q Consensus 401 ~~~~~~~~P~i~~~f~gg--~~~~l~~~~~~~~~~~~~~Cl~~~~~~~~-~~~~IlG~~f~~~~~vvfD~~~~riGF--- 474 (480)
. ....+|+|+|+|+|+ ++|+|++++|+++..++..|++|...... .+.||||++|||++|+|||++++||||
T Consensus 308 ~--~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~ 385 (403)
T 3aup_A 308 N--KINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTS 385 (403)
T ss_dssp G--GCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESS
T ss_pred C--CcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecc
Confidence 3 334799999999886 69999999999987656789999886532 357999999999999999999999999
Q ss_pred ----eeCCCC
Q 011649 475 ----GPGNCN 480 (480)
Q Consensus 475 ----a~~~C~ 480 (480)
++++|+
T Consensus 386 ~~~~~~~~C~ 395 (403)
T 3aup_A 386 SLHSHGVKCA 395 (403)
T ss_dssp CGGGGTCCGG
T ss_pred cccccCCCcc
Confidence 778884
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.3e-56 Score=458.08 Aligned_cols=329 Identities=23% Similarity=0.430 Sum_probs=261.9
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCcccccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLE 197 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~ 197 (480)
+.+|++. ...+.+|+++|.|||| |+|||||+++||+|.+|. +|+.++|+++.|.....
T Consensus 3 ~~~pv~~-~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~ 60 (381)
T 1t6e_X 3 VLAPVTK-DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANA 60 (381)
T ss_dssp EEEEEEE-CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHS
T ss_pred eEEeEEe-cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccC
Confidence 4567764 1267899999999998 999999999999998751 36678899999976542
Q ss_pred CCCCCCCCCCC---------CCCC-cceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCe----EEEEEecC--CCCC
Q 011649 198 WFPPNGQDKCS---------SKEC-PYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPF----LLGCTDNN--TGDQ 261 (480)
Q Consensus 198 ~~~~~~~~~C~---------~~~c-~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~----~FGc~~~~--~g~~ 261 (480)
+. ...|+ +..| .|.++|+||+.++|.+++|+|+|++.+....+ +++ .|||++.+ .+.+
T Consensus 61 --~~--~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v--~~~~~~~~Fg~~~~~~~~~~~ 134 (381)
T 1t6e_X 61 --YP--APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPV--SKVNVGVLAACAPSKLLASLP 134 (381)
T ss_dssp --SC--CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEE--EEEEEEEEEEECCGGGGTTSC
T ss_pred --CC--CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccc--cceeeeeEeecCcccccCCCC
Confidence 10 22454 2357 59999999988899999999999864311112 443 67999886 4445
Q ss_pred CCCCceeecCCCCccceeecccc----e-eEEEecCCCCCceeEEeCCCCC---cCCCCcEEeeceeCCCCCeeEEEEEe
Q 011649 262 NGASGIMGLDRGPVSIISKTNIS----Y-FFYCLHSPYGSTGYITFGKPDT---VNKKFVKYTPIVTTPEQSEFYHITLT 333 (480)
Q Consensus 262 ~~~~GilGLg~~~~Sl~sQl~~~----~-FS~cL~~~~~~~G~L~fGg~d~---~~~~~~~~tpl~~~~~~~~~y~v~l~ 333 (480)
...+||||||++++|+++|+..+ . ||+||++. ..|.|+||+.+. ++.+++.|+|++.++.. .+|+|+|+
T Consensus 135 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~ 211 (381)
T 1t6e_X 135 RGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISAR 211 (381)
T ss_dssp TTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEE
T ss_pred CCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEE
Confidence 78899999999999999998753 2 99999875 579999999764 25789999999986543 35779999
Q ss_pred eEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhh-------hccCC-CCcccccccceecCCCc-
Q 011649 334 GISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMK-------KYKMG-KGIEDLFDTCYDLSAYK- 404 (480)
Q Consensus 334 gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~-------~~~~~-~~~~~~~~~C~~~~~~~- 404 (480)
+|+||++.+.++...|..+++||||||++++||+++|++|+++|.+++. .+++. ... ..++.||+.++..
T Consensus 212 ~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~C~~~~~~~~ 290 (381)
T 1t6e_X 212 SIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAV-APFGVCYDTKTLGN 290 (381)
T ss_dssp EEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCC-TTCSCEEEGGGCCE
T ss_pred EEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCC-CCCCccCCCCCCcc
Confidence 9999999998887767557899999999999999999999999999874 23332 222 4568999876532
Q ss_pred ---ccccceEEEEEcCCcEEEecCCCeEEEeCCCeEEEEEEeCCC------CCCeeeechhhhceeEEEEeCCCCEEEEe
Q 011649 405 ---TVVVPKITIHFLGGVDLELDVRGTLVVESVRQVCLGFALLPS------DPNSILLGNVQQRGYEVHYDVAGRRLGFG 475 (480)
Q Consensus 405 ---~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~Cl~~~~~~~------~~~~~IlG~~f~~~~~vvfD~~~~riGFa 475 (480)
...+|+|+|+|+||++|+|++++|+++..++..|++|..... ..+.||||++|||++|+|||++++|||||
T Consensus 291 ~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 291 NLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp ETTEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred cccCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 247899999998779999999999998766789999887653 12579999999999999999999999999
Q ss_pred eCC
Q 011649 476 PGN 478 (480)
Q Consensus 476 ~~~ 478 (480)
++.
T Consensus 371 ~~~ 373 (381)
T 1t6e_X 371 RLP 373 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 854
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.8e-56 Score=456.57 Aligned_cols=303 Identities=23% Similarity=0.389 Sum_probs=247.5
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIH--CSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
...|+.+- .+.+|+++|+||||+|++.|++||||+++||+|..|.. |..+ +.|||++|+||+..
T Consensus 46 ~~~~l~n~--~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~--~~y~~~~SsT~~~~---------- 111 (370)
T 3psg_A 46 GDEPLENY--LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDH--NQFNPDDSSTFEAT---------- 111 (370)
T ss_dssp CCCTTGGG--TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS--CCBCGGGCTTCEEE----------
T ss_pred ceecceec--cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCC--CCCCCccCcCcEEC----------
Confidence 44566542 67899999999999999999999999999999999986 6654 89999999999987
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecCC
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLDR 272 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~ 272 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ +++.|||++...+. | ..++||||||+
T Consensus 112 ----------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v------~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~ 169 (370)
T 3psg_A 112 ----------S-----QELSITYGTGS-MTGILGYDTVQVGGISD------TNQIFGLSETEPGSFLYYAPFDGILGLAY 169 (370)
T ss_dssp ----------E-----EEEEEESSSCE-EEEEEEEEEEEETTEEE------EEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred ----------C-----cEEEEEeCCce-EEEEEEEEEEeeCCccc------CCeEEEEEEeecccccccCCccceeccCC
Confidence 2 79999999995 89999999999988765 89999999998763 3 56899999999
Q ss_pred CCccc------eeecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcc
Q 011649 273 GPVSI------ISKTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGG 339 (480)
Q Consensus 273 ~~~Sl------~sQl~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg 339 (480)
..++. +.++..+ .||+||.+.....|.|+|||+|+ ++.+++.|+|+.. ..+|.|.|++|+|++
T Consensus 170 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g 245 (370)
T 3psg_A 170 PSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDG 245 (370)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSS
T ss_pred ccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECC
Confidence 87653 2223222 29999998755689999999998 8899999999987 678999999999999
Q ss_pred eEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCc
Q 011649 340 ERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGV 419 (480)
Q Consensus 340 ~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~ 419 (480)
+.+..... ..+||||||++++||++++++|.+++++.. ...+ +|.++|.....+|+|+|+|+| +
T Consensus 246 ~~~~~~~~----~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----~~~g-------~~~v~C~~~~~lP~i~f~~~g-~ 309 (370)
T 3psg_A 246 ETIACSGG----CQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSDG-------EMVISCSSIDSLPDIVFTIDG-V 309 (370)
T ss_dssp SEEECTTC----EEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTTC-------CEECCGGGGGGCCCEEEEETT-E
T ss_pred EEEecCCC----ceEEEcCCCCcEECCHHHHHHHHHHhCCcc----cCCC-------cEEEECCCcccCCcEEEEECC-E
Confidence 88764322 469999999999999999999999886641 1122 234444445689999999965 9
Q ss_pred EEEecCCCeEEEeCCCeEEE-EEEeCCC---CCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 420 DLELDVRGTLVVESVRQVCL-GFALLPS---DPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 420 ~~~l~~~~~~~~~~~~~~Cl-~~~~~~~---~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
++.|++++|+++ . ...|+ +|...+. ....||||++|||++|+|||.+++|||||+++
T Consensus 310 ~~~l~~~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 310 QYPLSPSAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEEECHHHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEECHHHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999998 3 44698 6776432 22369999999999999999999999999974
No 5
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.7e-56 Score=454.56 Aligned_cols=312 Identities=23% Similarity=0.318 Sum_probs=258.1
Q ss_pred cceeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCccccccCCCccc
Q 011649 116 KAFTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI---HCSQQRDPFFDPSKSKTFSKIPCNSTTC 192 (480)
Q Consensus 116 ~~~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~---~C~~~~~~~fdps~SsT~~~~~C~s~~C 192 (480)
+...+|+... .+..|+++|.||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 6 ~~~~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~------- 74 (361)
T 1mpp_A 6 SVDTPGLYDF--DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK--RFFDPSSSSTFKET------- 74 (361)
T ss_dssp CEEEEEEEET--TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS--CCBCGGGCTTCEEE-------
T ss_pred ccceEEeecC--CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC--CcCCCccCCceEec-------
Confidence 3455777752 5789999999999999999999999999999999998 59865 79999999999986
Q ss_pred cccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCC------CC--CCC
Q 011649 193 KILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTG------DQ--NGA 264 (480)
Q Consensus 193 ~~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g------~~--~~~ 264 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+ .| ...
T Consensus 75 -------------~-----~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~v------~~~~fg~~~~~~~~~~~~~~~~~~~~ 129 (361)
T 1mpp_A 75 -------------D-----YNLNITYGTGG-ANGIYFRDSITVGGATV------KQQTLAYVDNVSGPTAEQSPDSELFL 129 (361)
T ss_dssp -------------E-----EEEEEECSSCE-EEEEEEEEEEEETTEEE------EEEEEEEEEEEESGGGSSCTTCSSCC
T ss_pred -------------C-----CeEEEEECCce-EEEEEEEEEEEECCEEE------eceEEEEEEeccCccccccccccCCC
Confidence 2 79999999996 89999999999987664 8999999998765 33 568
Q ss_pred CceeecCCCCcccee------------ecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCC
Q 011649 265 SGIMGLDRGPVSIIS------------KTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQS 325 (480)
Q Consensus 265 ~GilGLg~~~~Sl~s------------Ql~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~ 325 (480)
+||||||+..+++.. |+..+ .||+||.+. ...|.|+|||+|+ ++.+++.|+|+.......
T Consensus 130 ~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~ 208 (361)
T 1mpp_A 130 DGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGY 208 (361)
T ss_dssp CEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEE
T ss_pred CCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCce
Confidence 999999998765432 33222 299999985 4589999999998 788999999998854323
Q ss_pred eeEEEEEeeEEEcceEeecCccccCCCCEE-EecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCc
Q 011649 326 EFYHITLTGISVGGERLPLKASYFTKLSTE-IDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYK 404 (480)
Q Consensus 326 ~~y~v~l~gIsVgg~~l~i~~~~~~~~~~i-iDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 404 (480)
.+|.|.|++|+|+++.+.++.. .++| |||||++++||+++|++|.+++.+. ++...+. +..+|+.
T Consensus 209 ~~~~v~l~~i~v~~~~~~~~~~----~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~---~~~~~g~--~~~~C~~----- 274 (361)
T 1mpp_A 209 FFWDAPVTGVKIDGSDAVSFDG----AQAFTIDTGTNFFIAPSSFAEKVVKAALPD---ATESQQG--YTVPCSK----- 274 (361)
T ss_dssp EEEEEEEEEEEETTEEEEEEEE----EEEEEEETTCCSEEEEHHHHHHHHHHHCTT---CEEETTE--EEEEHHH-----
T ss_pred eEEEEEEeEEEECCeeeccCCC----CEEEEECCCCCceeCCHHHHHHHHHHhCCc---ccCCCCc--EEEECCC-----
Confidence 4899999999999998753322 4599 9999999999999999999998765 2322222 3457764
Q ss_pred cccc-ceEEEEE--cC----CcEEEecCCCeEEEeC-CCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEe
Q 011649 405 TVVV-PKITIHF--LG----GVDLELDVRGTLVVES-VRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFG 475 (480)
Q Consensus 405 ~~~~-P~i~~~f--~g----g~~~~l~~~~~~~~~~-~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa 475 (480)
...+ |+|+|+| ++ |+++.|++++|+++.. ....|+ +|.... .+.||||++|||++|+|||++++|||||
T Consensus 275 ~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~--~~~~iLG~~fl~~~yvvfD~~~~~igfa 352 (361)
T 1mpp_A 275 YQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG--GNQFIVGNLFLRFFVNVYDFGKNRIGFA 352 (361)
T ss_dssp HTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES--SSCCEEEHHHHTTEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC--CCCEEEChHHhccEEEEEECCCCEEEEE
Confidence 3467 9999999 51 6999999999999875 356898 888762 3479999999999999999999999999
Q ss_pred eCCCC
Q 011649 476 PGNCN 480 (480)
Q Consensus 476 ~~~C~ 480 (480)
+++|+
T Consensus 353 ~~~~~ 357 (361)
T 1mpp_A 353 PLASG 357 (361)
T ss_dssp EBCTT
T ss_pred EcccC
Confidence 99995
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1e-55 Score=449.65 Aligned_cols=306 Identities=24% Similarity=0.378 Sum_probs=249.4
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI--HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
..+|+... .+..|+++|.||||+|++.|++||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 13 ~~~~l~n~--~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~---------- 78 (351)
T 1tzs_A 13 AKEPLINY--LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH--SRFQPSQSSTYSQP---------- 78 (351)
T ss_dssp -CCTTGGG--SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS--CCBCGGGCTTCBCC----------
T ss_pred cceeceec--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC--CcCCcccCcceEEC----------
Confidence 44666542 5689999999999999999999999999999999998 48765 79999999999876
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecCC
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLDR 272 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~ 272 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ +++.|||++...+. | ...+||||||+
T Consensus 79 ----------~-----~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~------~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 136 (351)
T 1tzs_A 79 ----------G-----QSFSIQYGTGS-LSGIIGADQVSVEGLTV------VGQQFGESVTEPGQTFVDAEFDGILGLGY 136 (351)
T ss_dssp ----------S-----CEEEEESSSCE-EEEEEEEEEEEETTEEE------EEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred ----------C-----CEEEEEeCCCC-eEEEEEEeEEEECCeEE------CCeEEEEEEeccccccccCCCceEEecCC
Confidence 3 79999999995 89999999999987664 89999999988664 3 56899999999
Q ss_pred CCccc------eeeccc------ceeEEEecCCCCC--ceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEE
Q 011649 273 GPVSI------ISKTNI------SYFFYCLHSPYGS--TGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISV 337 (480)
Q Consensus 273 ~~~Sl------~sQl~~------~~FS~cL~~~~~~--~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsV 337 (480)
..++. +.|+.. ..||+||.+.... .|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|++|+|
T Consensus 137 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 212 (351)
T 1tzs_A 137 PSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQV 212 (351)
T ss_dssp GGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEE
T ss_pred ccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEE
Confidence 87763 223322 2299999886433 79999999998 7889999999987 6799999999999
Q ss_pred cceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcC
Q 011649 338 GGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLG 417 (480)
Q Consensus 338 gg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (480)
+++.+.... ..++||||||++++||+++|++|.+++++.. .. + .+..+|++ ...+|+|+|+|+|
T Consensus 213 ~~~~~~~~~----~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~--g--~~~~~C~~-----~~~~P~i~f~f~g 276 (351)
T 1tzs_A 213 GGTVMFCSE----GCQAIVDTGTSLITGPSDKIKQLQNAIGAAP---VD--G--EYAVECAN-----LNVMPDVTFTING 276 (351)
T ss_dssp TTEEEECTT----CEEEEECTTCSSEEECHHHHHHHHHHHTCEE---CS--S--SEEECGGG-----GGGSCCEEEEETT
T ss_pred CCceEEcCC----CceEEeccCCcceeCCHHHHHHHHHHhCCcc---cC--C--eEEEeCCC-----CccCCcEEEEECC
Confidence 998864322 2469999999999999999999999986542 11 2 23446764 3578999999965
Q ss_pred CcEEEecCCCeEEEeCC--CeEEE-EEEeCCC---CCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 418 GVDLELDVRGTLVVESV--RQVCL-GFALLPS---DPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 418 g~~~~l~~~~~~~~~~~--~~~Cl-~~~~~~~---~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
++++|++++|+++... ...|+ +|..... ..+.||||++|||++|+|||++++|||||+++|.
T Consensus 277 -~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 277 -VPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp -EEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred -EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 9999999999987642 45898 7876531 2457999999999999999999999999999983
No 7
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.6e-56 Score=449.99 Aligned_cols=298 Identities=20% Similarity=0.303 Sum_probs=249.3
Q ss_pred ceeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCC--CCCC---------CCCCCCCCCCCCCCCccccc
Q 011649 117 AFTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCK--PCIH---------CSQQRDPFFDPSKSKTFSKI 185 (480)
Q Consensus 117 ~~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~--~C~~---------C~~~~~~~fdps~SsT~~~~ 185 (480)
.+.+|+.+ .+..|+++|.||||+|++.|+|||||+++||+|. +|.. |..+ +.|||++|+||+..
T Consensus 2 ~~~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~ 76 (334)
T 1j71_A 2 DVPTTLIN---EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQE--GTFDPSSSSSAQNL 76 (334)
T ss_dssp CEEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSS--CCBCGGGCTTCEEE
T ss_pred ceeEEEec---CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCC--CcCCcccCCCcccC
Confidence 36778887 6789999999999999999999999999999866 6753 6543 79999999999986
Q ss_pred cCCCccccccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCCCCCC
Q 011649 186 PCNSTTCKILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQNGAS 265 (480)
Q Consensus 186 ~C~s~~C~~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~ 265 (480)
+ |.|.+.|+||+.++|.+++|+|+|++..+ +++.|||++... ..+
T Consensus 77 --------------------~-----~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~------~~~~fg~~~~~~----~~~ 121 (334)
T 1j71_A 77 --------------------N-----QDFSIEYGDLTSSQGSFYKDTVGFGGISI------KNQQFADVTTTS----VDQ 121 (334)
T ss_dssp --------------------E-----EEEEEEBTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEES----SSS
T ss_pred --------------------C-----CceEEEECCCCEEEEEEEEEEEEECCEEE------ccEEEEEEEecC----CCc
Confidence 2 79999999998889999999999987654 899999999864 689
Q ss_pred ceeecCCCCc--------cceeecccc----e--eEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEE
Q 011649 266 GIMGLDRGPV--------SIISKTNIS----Y--FFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHI 330 (480)
Q Consensus 266 GilGLg~~~~--------Sl~sQl~~~----~--FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v 330 (480)
||||||+... +++.||..+ . ||+||.+.....|.|+|||+|+ ++.+++.|+|+.. ..+|.|
T Consensus 122 GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v 197 (334)
T 1j71_A 122 GIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRV 197 (334)
T ss_dssp CEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEE
T ss_pred cEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccC----CCeEEE
Confidence 9999999865 445555432 2 9999987655689999999987 7789999999987 458999
Q ss_pred EEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccce
Q 011649 331 TLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPK 410 (480)
Q Consensus 331 ~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ 410 (480)
.|++|+|+|+.+..+ .++||||||++++||+++|++|.+++.+.+ ....+. ..+.+|+ .+|.
T Consensus 198 ~l~~i~v~g~~~~~~------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~~~-~~~~~C~--------~~p~ 259 (334)
T 1j71_A 198 HLGSINFDGTSVSTN------ADVVLDSGTTITYFSQSTADKFARIVGATW---DSRNEI-YRLPSCD--------LSGD 259 (334)
T ss_dssp EEEEEEETTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEE---ETTTTE-EECSSSC--------CCSE
T ss_pred EEeEEEECCEeccCC------ccEEEeCCCCcEecCHHHHHHHHHHcCCcc---cCCCce-EEEEcCC--------CCCc
Confidence 999999999988643 359999999999999999999999998764 211112 1225674 2799
Q ss_pred EEEEEcCCcEEEecCCCeEEEeCCCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 411 ITIHFLGGVDLELDVRGTLVVESVRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 411 i~~~f~gg~~~~l~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
|+|+|.||++++|++++|+++..++..|+ +|... +.||||++|||++|++||++++|||||+++|+
T Consensus 260 i~f~f~~g~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 326 (334)
T 1j71_A 260 AVFNFDQGVKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQVKYT 326 (334)
T ss_dssp EEEEESTTCEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEECCC
T ss_pred eEEEEcCCcEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEecCCC
Confidence 99999767999999999999875555698 45543 25999999999999999999999999999995
No 8
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.1e-55 Score=447.06 Aligned_cols=300 Identities=21% Similarity=0.348 Sum_probs=254.4
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEe-----CCCCCCCCCCCCCCCCCCCCCccccccCCCccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQ-----CKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTC 192 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~-----c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C 192 (480)
+.+|+.. .+..|+++|.||||+|++.|++||||+++||+ |.+|..|..+ +.|||++|+||+..
T Consensus 3 i~~~l~~---~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~--~~y~~~~SsT~~~~------- 70 (339)
T 3fv3_A 3 ISLSLIN---EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSS--GTFTPSSSSSYKNL------- 70 (339)
T ss_dssp EEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTT--CCBCGGGCTTCEEE-------
T ss_pred eeeEEEc---CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCC--CcCCCccCcceeeC-------
Confidence 6778887 67899999999999999999999999999998 7777779865 79999999999987
Q ss_pred cccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCCCCCCceeecCC
Q 011649 193 KILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQNGASGIMGLDR 272 (480)
Q Consensus 193 ~~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~ 272 (480)
+ |.|.+.|++|+.+.|.+++|+|+|++..+ +++.|||++...+ .+||||||+
T Consensus 71 -------------~-----~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v------~~~~fg~~~~~~~----~~GilGLg~ 122 (339)
T 3fv3_A 71 -------------G-----AAFTIRYGDGSTSQGTWGKDTVTINGVSI------TGQQIADVTQTSV----DQGILGIGY 122 (339)
T ss_dssp -------------E-----EEEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEESS----SSCEEECSC
T ss_pred -------------C-----ceEEEEECCCceEEEEEEEEEEEECCEEE------CceEEEEEEecCC----CceeEEecC
Confidence 2 79999999999999999999999998765 8999999998763 699999999
Q ss_pred CCcc----------------ceeecccce------eEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEE
Q 011649 273 GPVS----------------IISKTNISY------FFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYH 329 (480)
Q Consensus 273 ~~~S----------------l~sQl~~~~------FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~ 329 (480)
...+ ++.||..+. ||+||.+.....|.|+|||+|+ ++.+++.|+|+.. +.+|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~ 198 (339)
T 3fv3_A 123 TSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS----SQALT 198 (339)
T ss_dssp GGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC----SSSCE
T ss_pred ccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc----CccEE
Confidence 8764 444554432 9999998766689999999998 7889999999987 55899
Q ss_pred EEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccc
Q 011649 330 ITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVP 409 (480)
Q Consensus 330 v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P 409 (480)
|+|++|+|+++.+... .++||||||++++||+++|++|.+++.+.....+...+ .+..+|+. ..+|
T Consensus 199 v~l~~i~v~g~~~~~~------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~--~~~~~C~~------~~~p 264 (339)
T 3fv3_A 199 ISLASVNLKGSSFSFG------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQY--LYFIDCNT------DTSG 264 (339)
T ss_dssp EEEEEEEESSCEEEEE------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEE--EEEECTTC------CCCS
T ss_pred EEEEEEEECCEeecCC------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCc--eEEEecCC------CCCC
Confidence 9999999999988643 35999999999999999999999999865321111122 23446753 4689
Q ss_pred eEEEEEcCCcEEEecCCCeEEEeCCCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 410 KITIHFLGGVDLELDVRGTLVVESVRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 410 ~i~~~f~gg~~~~l~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
.|+|+|++|++++|++++|+++.+ ...|+ +|.+. +.||||++|||++|++||++++|||||+++|+
T Consensus 265 ~i~f~f~~g~~~~v~~~~~~~~~~-~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 265 TTVFNFGNGAKITVPNTEYVYQNG-DGTCLWGIQPS----DDTILGDNFLRHAYLLYNLDANTISIAQVKYT 331 (339)
T ss_dssp EEEEEETTSCEEEEEGGGGEEECS-SSCEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred cEEEEECCCCEEEECHHHheeeCC-CCeEEEEEEeC----CcEEeChHHHhCEEEEEECCCCEEEEEecCCC
Confidence 999999767999999999999864 45685 88772 36999999999999999999999999999995
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=8e-56 Score=445.42 Aligned_cols=301 Identities=20% Similarity=0.354 Sum_probs=248.3
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI--HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
..+|+.+. .+.+|+++|.||||+|++.|++||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 4 ~~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~---------- 69 (323)
T 3cms_A 4 ASVPLTNY--LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH--QRFDPRKSSTFQNL---------- 69 (323)
T ss_dssp EEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEE----------
T ss_pred ceeeeEec--cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC--CCCCCccCCCeEEC----------
Confidence 34667652 5789999999999999999999999999999999995 49765 78999999999986
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCC-CC--CCCCceeecCC
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTG-DQ--NGASGIMGLDR 272 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~ 272 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ +++.|||++...+ .| ...+||||||+
T Consensus 70 ----------~-----~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~------~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 127 (323)
T 3cms_A 70 ----------G-----KPLSIHYGTGS-MQGILGYDTVTVSNIVD------IQQTVGLSTQEPGDFFTYAEFDGILGMAY 127 (323)
T ss_dssp ----------E-----EEEEEEETTEE-EEEEEEEEEEEETTEEE------EEEEEEEEEECCSHHHHHSSCSEEEECSC
T ss_pred ----------C-----cEEEEEeCCCC-eEEEEEEEEEEECCeEE------eccEEEEEEecccccccccCCceEEecCc
Confidence 2 79999999996 89999999999987664 8999999998866 23 57899999999
Q ss_pred CCccc----------eeeccc--ceeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcc
Q 011649 273 GPVSI----------ISKTNI--SYFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGG 339 (480)
Q Consensus 273 ~~~Sl----------~sQl~~--~~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg 339 (480)
..++. .+|... ..||+||.+... .|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|++|+|++
T Consensus 128 ~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~ 202 (323)
T 3cms_A 128 PSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISG 202 (323)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETT
T ss_pred chhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECC
Confidence 87753 233222 229999988643 39999999997 7789999999986 578999999999999
Q ss_pred eEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCc
Q 011649 340 ERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGV 419 (480)
Q Consensus 340 ~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~ 419 (480)
+.+.++.. .++||||||++++||+++|++|.+++.+. ....+ .+..+|++ ...+|+|+|+|+| +
T Consensus 203 ~~~~~~~~----~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~g--~~~~~C~~-----~~~~P~i~f~f~g-~ 266 (323)
T 3cms_A 203 VVVACEGG----CQAILDTGTSKLVGPSSDILNIQQAIGAT----QNQYG--EFDIDCDN-----LSYMPTVVFEING-K 266 (323)
T ss_dssp EEEESTTC----EEEEECTTCCSEEECHHHHHHHHHHHTCE----EETTT--EEEECTTC-----TTTSCCEEEEETT-E
T ss_pred EEeecCCC----cEEEEecCCccEeCCHHHHHHHHHHhCCe----ecCCC--cEEEECCC-----CccCceEEEEECC-E
Confidence 98765432 46999999999999999999999998653 11122 23345654 4578999999965 9
Q ss_pred EEEecCCCeEEEeCCCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 420 DLELDVRGTLVVESVRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 420 ~~~l~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+++|++++|+++ ....|+ +|.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 267 ~~~i~~~~y~~~--~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 267 MYPLTPSAYTSQ--DQGFCTSGFQSEN-HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EEEECHHHHEEE--ETTEEEESEEEC----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhccC--CCCEEEEEEEeCC-CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 999999999998 356898 687764 23579999999999999999999999999864
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1e-55 Score=448.12 Aligned_cols=299 Identities=21% Similarity=0.312 Sum_probs=247.8
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCC--CCCC---------CCCCCCCCCCCCCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCK--PCIH---------CSQQRDPFFDPSKSKTFSKIP 186 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~--~C~~---------C~~~~~~~fdps~SsT~~~~~ 186 (480)
+.+|+.+ ++..|+++|.||||+|++.|+|||||+++||+|. +|.. |..+ +.|||++|+||+..
T Consensus 3 v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~- 76 (342)
T 2qzx_A 3 VAVTLHN---EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSA--GSYSPASSRTSQNL- 76 (342)
T ss_dssp EEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTT--CCBCGGGCTTCEEE-
T ss_pred eeEEEec---CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCC--CcCCcccCCCcccC-
Confidence 5678877 6789999999999999999999999999999865 6752 6543 79999999999986
Q ss_pred CCCccccccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCCCCCCc
Q 011649 187 CNSTTCKILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQNGASG 266 (480)
Q Consensus 187 C~s~~C~~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~G 266 (480)
+ |.|.+.|+||+.++|.+++|+|+|++..+ +++.|||++... ..+|
T Consensus 77 -------------------~-----~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v------~~~~fg~~~~~~----~~~G 122 (342)
T 2qzx_A 77 -------------------N-----TRFDIKYGDGSYAKGKLYKDTVGIGGVSV------RDQLFANVWSTS----ARKG 122 (342)
T ss_dssp -------------------E-----EEEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEEC----SSSC
T ss_pred -------------------C-----CcEEEEeCCCCeEEEEEEEEEEEECCEEe------cceEEEEEEecC----CCcC
Confidence 2 79999999998889999999999987654 899999999864 5899
Q ss_pred eeecCCCCc--------cceeecccc----e--eEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEE
Q 011649 267 IMGLDRGPV--------SIISKTNIS----Y--FFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHIT 331 (480)
Q Consensus 267 ilGLg~~~~--------Sl~sQl~~~----~--FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~ 331 (480)
|||||+... +++.||..+ . ||+||.+.....|.|+|||+|+ ++.+++.|+|+.. ..+|.|.
T Consensus 123 ilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~ 198 (342)
T 2qzx_A 123 ILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS----EKKLTVG 198 (342)
T ss_dssp EEECSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEE
T ss_pred EEEEccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC----CceEEEE
Confidence 999999865 444555432 2 9999987655689999999997 7889999999987 4589999
Q ss_pred EeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceE
Q 011649 332 LTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKI 411 (480)
Q Consensus 332 l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 411 (480)
|++|+|+|+.+..+ .++||||||++++||+++|++|.+++.+.+. +....+. .+..+|+ .+|.|
T Consensus 199 l~~i~v~g~~~~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~C~--------~~p~i 262 (342)
T 2qzx_A 199 LRSVNVRGRNVDAN------TNVLLDSGTTISYFTRSIVRNILYAIGAQMK-FDSAGNK-VYVADCK--------TSGTI 262 (342)
T ss_dssp EEEEEETTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE-ECTTSCE-EEEECTT--------CCCEE
T ss_pred EeEEEECCEecCCC------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeee-eccCCCc-EEEEECC--------CCCcE
Confidence 99999999988643 3599999999999999999999999987642 1122221 1233563 27999
Q ss_pred EEEEcCCcEEEecCCCeEEEe-----CCCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 412 TIHFLGGVDLELDVRGTLVVE-----SVRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 412 ~~~f~gg~~~~l~~~~~~~~~-----~~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
+|+|+||++++|++++|+++. +....|++ |... +.||||++|||++|++||++++|||||+++|+
T Consensus 263 ~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 263 DFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYT 333 (342)
T ss_dssp EEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCC
Confidence 999976799999999999874 22467984 5443 25999999999999999999999999999995
No 11
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.3e-55 Score=444.26 Aligned_cols=294 Identities=21% Similarity=0.324 Sum_probs=244.4
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.||||+|++.|++||||+++||+|.+|..| .+..+.|||++|+||+.. +
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~--------------------~- 70 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQAD--------------------G- 70 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEE--------------------E-
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeC--------------------C-
Confidence 788999999999999999999999999999999999998 666789999999999875 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC--CCCCceeecCCCCccc-------e
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ--NGASGIMGLDRGPVSI-------I 278 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~--~~~~GilGLg~~~~Sl-------~ 278 (480)
|.|.+.|+||+.+.|.+++|+|+|++..+ +++.|||++...+.| ...+||||||+..++. +
T Consensus 71 ----~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v------~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 140 (325)
T 2apr_A 71 ----RTWSISYGDGSSASGILAKDNVNLGGLLI------KGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPM 140 (325)
T ss_dssp ----EEEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHH
T ss_pred ----CEEEEEECCCCCEEEEEEEEEEEECCEEE------CcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHH
Confidence 79999999998899999999999987664 899999999876555 3589999999987753 3
Q ss_pred eecccc------eeEEEecCC-CCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccC
Q 011649 279 SKTNIS------YFFYCLHSP-YGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFT 350 (480)
Q Consensus 279 sQl~~~------~FS~cL~~~-~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 350 (480)
.|+..+ .||+||.+. ....|.|+|||+|+ ++.+++.|+|+... +.+|.|.|++|+||+ .+. ...
T Consensus 141 ~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~--~~~-- 212 (325)
T 2apr_A 141 DNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-STV--ASS-- 212 (325)
T ss_dssp HHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-EEE--ECC--
T ss_pred HHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-Eec--CCC--
Confidence 343322 299999653 34589999999998 78899999999752 568999999999999 332 222
Q ss_pred CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEE
Q 011649 351 KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLV 430 (480)
Q Consensus 351 ~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~ 430 (480)
.++||||||++++||+++|++|.+++.+.+. .. + .+..+|+ ...+|+|+|+|+| .++.|++++|++
T Consensus 213 -~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~---~~-g--~~~~~C~------~~~~p~i~f~f~g-~~~~ip~~~~~~ 278 (325)
T 2apr_A 213 -FDGILDTGTTLLILPNNIAASVARAYGASDN---GD-G--TYTISCD------TSAFKPLVFSING-ASFQVSPDSLVF 278 (325)
T ss_dssp -EEEEECTTCSSEEEEHHHHHHHHHHHTCEEC---SS-S--CEEECSC------GGGCCCEEEEETT-EEEEECGGGGEE
T ss_pred -ceEEEecCCccEECCHHHHHHHHHHHhcccC---CC-C--eEEEECC------CCCCCcEEEEECC-EEEEECHHHEEE
Confidence 3599999999999999999999999987642 22 2 2333565 2358999999987 599999999998
Q ss_pred EeCCCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 431 VESVRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 431 ~~~~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+.. +..|++ |.... .+.||||++|||++|+|||++++|||||+++
T Consensus 279 ~~~-~~~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 279 EEF-QGQCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEE-TTEEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCC-CCeEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 764 668985 55443 3579999999999999999999999999874
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.3e-55 Score=443.19 Aligned_cols=302 Identities=20% Similarity=0.364 Sum_probs=250.9
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIH--CSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
.++|+..- .+.+|+++|.||||+|++.|++||||+++||+|.+|.. |..+ +.|||++|+||+..
T Consensus 3 ~~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~---------- 68 (329)
T 1dpj_A 3 HDVPLTNY--LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH--SKYDHEASSSYKAN---------- 68 (329)
T ss_dssp EEEECEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEE----------
T ss_pred cceeeeec--CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc--CcCCcccCcCeEEC----------
Confidence 35677652 56899999999999999999999999999999999987 8765 78999999999875
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCC-CC--CCCCceeecCC
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTG-DQ--NGASGIMGLDR 272 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g-~~--~~~~GilGLg~ 272 (480)
+ |.|.+.|++| .++|.+++|+|+|++..+ +++.|||++...+ .| ...+||||||+
T Consensus 69 ----------~-----~~~~i~Yg~G-s~~G~~~~D~v~ig~~~~------~~~~fg~~~~~~~~~f~~~~~~GilGLg~ 126 (329)
T 1dpj_A 69 ----------G-----TEFAIQYGTG-SLEGYISQDTLSIGDLTI------PKQDFAEATSEPGLTFAFGKFDGILGLGY 126 (329)
T ss_dssp ----------E-----EEEEEEETTE-EEEEEEEEEEEEETTEEE------EEEEEEEEEECCHHHHTTCSCSEEEECSC
T ss_pred ----------C-----cEEEEEECCc-eEEEEEEEEEEEECCeEE------CCeEEEEEEecCccccccCCcceEEEeCC
Confidence 2 7999999999 699999999999987664 8999999998765 22 56899999999
Q ss_pred CCccce----------eecc--cceeEEEecCCC---CCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEE
Q 011649 273 GPVSII----------SKTN--ISYFFYCLHSPY---GSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGIS 336 (480)
Q Consensus 273 ~~~Sl~----------sQl~--~~~FS~cL~~~~---~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIs 336 (480)
..+++. +|.. ...||+||.+.. ...|.|+||++|+ ++.+++.|+|+.. +.+|.|.|++|+
T Consensus 127 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~ 202 (329)
T 1dpj_A 127 DTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIG 202 (329)
T ss_dssp GGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEE
T ss_pred chhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEE
Confidence 887643 3321 222999997652 2479999999997 7889999999986 679999999999
Q ss_pred EcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEc
Q 011649 337 VGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFL 416 (480)
Q Consensus 337 Vgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~ 416 (480)
|+++.+... ...+||||||++++||+++|++|.+++.+. ... +.||.++|.....+|+|+|+|+
T Consensus 203 v~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~-------~g~~~~~C~~~~~~P~i~f~f~ 266 (329)
T 1dpj_A 203 LGDEYAELE-----SHGAAIDTGTSLITLPSGLAEMINAEIGAK----KGW-------TGQYTLDCNTRDNLPDLIFNFN 266 (329)
T ss_dssp ETTEEEECS-----SCEEEECTTCSCEEECHHHHHHHHHHHTCE----ECT-------TSSEEECGGGGGGCCCEEEEET
T ss_pred ECCeEecCC-----CccEEeeCCCCcEECCHHHHHHHHHHhCCc----cCC-------CCeEEEECCCCCcCCcEEEEEC
Confidence 999987632 256999999999999999999999988653 111 1245555555678999999997
Q ss_pred CCcEEEecCCCeEEEeCCCeEEE-EEEeCC---CCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 417 GGVDLELDVRGTLVVESVRQVCL-GFALLP---SDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 417 gg~~~~l~~~~~~~~~~~~~~Cl-~~~~~~---~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
| ++++|++++|+++.+ ..|+ +|.... ...+.||||++|||++|+|||++++|||||+++
T Consensus 267 g-~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 267 G-YNFTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp T-EEEEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C-EEEEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 5 999999999999874 5898 787653 233589999999999999999999999999864
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3e-55 Score=441.44 Aligned_cols=300 Identities=23% Similarity=0.427 Sum_probs=250.3
Q ss_pred eeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCccccccCCCccccccc
Q 011649 119 TFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIH--CSQQRDPFFDPSKSKTFSKIPCNSTTCKILL 196 (480)
Q Consensus 119 ~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 196 (480)
.+|+... .+.+|+++|.||||+|++.|++||||+++||+|.+|.. |..+ +.|||++|+||+..
T Consensus 3 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~----------- 67 (324)
T 1am5_A 3 TEQMKNE--ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH--NKFKPRQSSTYVET----------- 67 (324)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS--CCBCGGGCTTCEEE-----------
T ss_pred eeeeecC--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC--CcCCCccCCCeEeC-----------
Confidence 4677642 67899999999999999999999999999999999984 8765 78999999999986
Q ss_pred cCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecCCC
Q 011649 197 EWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLDRG 273 (480)
Q Consensus 197 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~ 273 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+. | ...+||||||+.
T Consensus 68 ---------~-----~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~~------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (324)
T 1am5_A 68 ---------G-----KTVDLTYGTGG-MRGILGQDTVSVGGGSD------PNQELGESQTEPGPFQAAAPFDGILGLAYP 126 (324)
T ss_dssp ---------E-----EEEEEECSSCE-EEEEEEEEEEESSSSCE------EEEEEEEEEECCSTTTTTCSSSEEEECSCG
T ss_pred ---------C-----cEEEEEECCCC-eEEEEEECceeECCcEE------cccEEEEEEecccccccCCCCceEEecCCc
Confidence 2 79999999995 69999999999987664 89999999988663 3 468999999998
Q ss_pred Cccce------eecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcce
Q 011649 274 PVSII------SKTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGE 340 (480)
Q Consensus 274 ~~Sl~------sQl~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~ 340 (480)
.++.. .|+..+ .||+||.+.....|.|+||++|+ ++.+++.|+|+.. +.+|.|.|++|+|+++
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~ 202 (324)
T 1am5_A 127 SIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQ 202 (324)
T ss_dssp GGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTE
T ss_pred cccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCc
Confidence 87643 222222 29999998755689999999998 7889999999987 6799999999999998
Q ss_pred EeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcE
Q 011649 341 RLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVD 420 (480)
Q Consensus 341 ~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~ 420 (480)
.+..+. ..+||||||++++||+++|++|.+++.+. ...+ .+..+|++ ...+|+|+|+|+| ++
T Consensus 203 ~~~~~~-----~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~g--~~~~~C~~-----~~~~P~i~f~f~g-~~ 264 (324)
T 1am5_A 203 TAACEG-----CQAIVDTGTSKIVAPVSALANIMKDIGAS-----ENQG--EMMGNCAS-----VQSLPDITFTING-VK 264 (324)
T ss_dssp ECCCCC-----EEEEECTTCSSEEECTTTHHHHHHHHTCE-----ECCC--CEECCTTS-----SSSSCCEEEEETT-EE
T ss_pred eeeccC-----ceEEEecCCccEECCHHHHHHHHHHhCCc-----ccCC--cEEEeCCC-----cccCCcEEEEECC-EE
Confidence 764221 45999999999999999999999988664 1122 23346653 4578999999965 99
Q ss_pred EEecCCCeEEEeCCCeEEE-EEEeCC---CCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 421 LELDVRGTLVVESVRQVCL-GFALLP---SDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 421 ~~l~~~~~~~~~~~~~~Cl-~~~~~~---~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
++|++++|+++. +..|+ +|.... ...+.||||++|||++|++||++++|||||+++
T Consensus 265 ~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 265 QPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred EEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999999987 56898 787753 123589999999999999999999999999874
No 14
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=5.6e-56 Score=455.71 Aligned_cols=303 Identities=20% Similarity=0.349 Sum_probs=251.0
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCccccccCCCcccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI----HCSQQRDPFFDPSKSKTFSKIPCNSTTCK 193 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~----~C~~~~~~~fdps~SsT~~~~~C~s~~C~ 193 (480)
..+|+.+- .+.+|+++|+||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 51 ~~~~l~n~--~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~--~~y~~~~SsT~~~~-------- 118 (383)
T 2x0b_A 51 SSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHN-------- 118 (383)
T ss_dssp CEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS--CCBCGGGCTTCEEE--------
T ss_pred ceEeeeec--CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC--CCCCCCCCCcEEEC--------
Confidence 45677652 6789999999999999999999999999999999996 49866 79999999999986
Q ss_pred ccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeec
Q 011649 194 ILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGL 270 (480)
Q Consensus 194 ~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGL 270 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ + +.|||++...+. | ..++|||||
T Consensus 119 ------------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v------~-~~Fg~a~~~~g~~f~~~~~dGIlGL 173 (383)
T 2x0b_A 119 ------------G-----TELTLRYSTGT-VSGFLSQDIITVGGITV------T-QMFGEVTEMPALPFMLAEFDGVVGM 173 (383)
T ss_dssp ------------E-----EEEEEECSSCE-EEEEEEEEEEEETTEEE------E-EEEEEEEECCHHHHTTCSSSEEEEC
T ss_pred ------------C-----cEEEEEcCCcc-EEEEEEeeEEEEcCceE------E-EEEEEEEecCCcccccCCCceEecc
Confidence 3 79999999995 89999999999987664 8 999999998663 2 578999999
Q ss_pred CCCCccc----------eeeccc--ceeEEEecCCCCC----ceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEe
Q 011649 271 DRGPVSI----------ISKTNI--SYFFYCLHSPYGS----TGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLT 333 (480)
Q Consensus 271 g~~~~Sl----------~sQl~~--~~FS~cL~~~~~~----~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~ 333 (480)
|+..+|. .+|... ..||+||.+.... .|.|+|||+|+ ++.+++.|+|+.. ..+|.|.|+
T Consensus 174 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~ 249 (383)
T 2x0b_A 174 GFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMK 249 (383)
T ss_dssp SCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEEC
T ss_pred CCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEe
Confidence 9988763 344222 2299999886433 79999999998 7889999999986 679999999
Q ss_pred eEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEE
Q 011649 334 GISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITI 413 (480)
Q Consensus 334 gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~ 413 (480)
+|+|+++.+.... ..++||||||+++++|+++|++|.+++++. + ..+. +..+|++ ...+|+|+|
T Consensus 250 ~i~v~~~~~~~~~----~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~-~~g~--~~v~C~~-----~~~~P~i~f 313 (383)
T 2x0b_A 250 GVSVGSSTLLCED----GCLALVDTGASYISGSTSSIEKLMEALGAK----K-RLFD--YVVKCNE-----GPTLPDISF 313 (383)
T ss_dssp EEEESSCCCBSTT----CEEEEECTTCSSEEECHHHHHHHHHHHTCE----E-CSSC--EEEEGGG-----TTTCCCEEE
T ss_pred EEEeCCceEEcCC----CcEEEEcCCCceEEcCHHHHHHHHHHhCCc----c-cCCc--EEEeccc-----cccCceEEE
Confidence 9999998753221 246999999999999999999999998764 2 2222 3346764 357899999
Q ss_pred EEcCCcEEEecCCCeEEEeCC--CeEEE-EEEeCCC---CCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 414 HFLGGVDLELDVRGTLVVESV--RQVCL-GFALLPS---DPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 414 ~f~gg~~~~l~~~~~~~~~~~--~~~Cl-~~~~~~~---~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+|+| +++.|++++|+++... ...|+ +|...+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 314 ~~~g-~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 314 HLGG-KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EETT-EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECC-EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9965 9999999999988652 46898 7877531 24579999999999999999999999999864
No 15
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.9e-55 Score=442.47 Aligned_cols=297 Identities=25% Similarity=0.335 Sum_probs=246.2
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.||||+|++.|+|||||+++||+|.+|..|..+..+.|||++|+||+.++ +
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~-------------------~- 72 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS-------------------G- 72 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT-------------------T-
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC-------------------C-
Confidence 77899999999999999999999999999999999998765556899999999999861 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCcccee-----
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSIIS----- 279 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~s----- 279 (480)
|.|.+.|+||+.++|.+++|+|+|++..+ +++.|||++...+.| ...+||||||+..++.++
T Consensus 73 ----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 142 (329)
T 3c9x_A 73 ----ASWSISYGDGSSSSGDVYTDKVTIGGFSV------NTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQK 142 (329)
T ss_dssp ----CBEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCC
T ss_pred ----CeEEEEeCCCCcEEEEEEEEEEEECCEEE------cceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCC
Confidence 79999999998899999999999987664 899999999876644 478999999998877543
Q ss_pred --------ecccceeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccC
Q 011649 280 --------KTNISYFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFT 350 (480)
Q Consensus 280 --------Ql~~~~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 350 (480)
|+....||+||.+. ..|.|+|||+|+ ++.+++.|+|+... ..+|.|.|++|+|+++.+. ...
T Consensus 143 ~~~~~l~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~--~~~-- 213 (329)
T 3c9x_A 143 TWFSNAASSLAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLN--RNS-- 213 (329)
T ss_dssp CHHHHHHTTSSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCC--SCC--
T ss_pred CHHHHHHHhcCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEecc--CCC--
Confidence 22223399999863 579999999998 88999999999752 5689999999999998763 222
Q ss_pred CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEE
Q 011649 351 KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLV 430 (480)
Q Consensus 351 ~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~ 430 (480)
.++||||||++++||+++|++|.+++.++. +....+. +..+|+ ..+|+|+|+|+| +++.|++++|++
T Consensus 214 -~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~--~~~~~~~--~~~~C~-------~~~P~i~f~f~g-~~~~ip~~~~~~ 280 (329)
T 3c9x_A 214 -IDGIADTGTTLLLLDDNVVDAYYANVQSAQ--YDNQQEG--VVFDCD-------EDLPSFSFGVGS-STITIPGDLLNL 280 (329)
T ss_dssp -EEEEECTTCCSEEECHHHHHHHHTTCTTCE--EETTTTE--EEEETT-------CCCCCEEEEETT-EEEEECGGGGEE
T ss_pred -ceEEEECCCCcEeCCHHHHHHHHHhCCCcE--EcCCCCE--EEEECC-------CCCCcEEEEECC-EEEEECHHHeee
Confidence 469999999999999999999998875432 2222222 334675 368999999975 999999999998
Q ss_pred EeC--CCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeC
Q 011649 431 VES--VRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPG 477 (480)
Q Consensus 431 ~~~--~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~ 477 (480)
... ....|++ |.... ..+.||||++|||++|+|||++++|||||+.
T Consensus 281 ~~~~~~~~~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 281 TPLEEGSSTCFGGLQSSS-GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EESSTTCSEEEESEEECT-TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eccCCCCCeEEEEEEcCC-CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 763 2478995 66553 3357999999999999999999999999974
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=5.1e-55 Score=440.69 Aligned_cols=296 Identities=22% Similarity=0.295 Sum_probs=244.1
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.||||+|++.|+|||||+++||+|.+|..|.. ..+.|||++|+||+.++ +
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~-------------------~- 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLS-------------------G- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEE-------------------E-
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecC-------------------C-
Confidence 67899999999999999999999999999999999998654 45899999999999862 1
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCcccee-----
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSIIS----- 279 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~s----- 279 (480)
|.|.+.|++|+.++|.+++|+|+|++..+ +++.|||++...+.| ...+||||||+..++.++
T Consensus 72 ----~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 141 (329)
T 1oew_A 72 ----ATWSISYGDGSSSSGDVYTDTVSVGGLTV------TGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQK 141 (329)
T ss_dssp ----EEEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCC
T ss_pred ----CeEEEEeCCCCcEEEEEEEEEEEECCEEE------eeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCC
Confidence 79999999998799999999999987664 899999999876644 478999999998876542
Q ss_pred --------ecccceeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccC
Q 011649 280 --------KTNISYFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFT 350 (480)
Q Consensus 280 --------Ql~~~~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 350 (480)
|+....||+||.+. ..|.|+|||+|+ ++.+++.|+|+... +.+|.|.|++|+|+++.+. ...
T Consensus 142 ~~~~~l~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~--~~~-- 212 (329)
T 1oew_A 142 TFFDNAKASLDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFK--STS-- 212 (329)
T ss_dssp CHHHHHTTTSSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCE--EEE--
T ss_pred CHHHHHHHhccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeecc--CCC--
Confidence 32223399999863 579999999998 78999999999752 5689999999999998764 221
Q ss_pred CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEE
Q 011649 351 KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLV 430 (480)
Q Consensus 351 ~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~ 430 (480)
.++||||||++++||+++|++|.+++.++. +....+. +..+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 213 -~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~--~~~~~g~--~~~~C~-------~~~P~i~f~fg-g~~~~ip~~~~~~ 279 (329)
T 1oew_A 213 -IDGIADTGTTLLYLPATVVSAYWAQVSGAK--SSSSVGG--YVFPCS-------ATLPSFTFGVG-SARIVIPGDYIDF 279 (329)
T ss_dssp -EEEEECTTCCSEEECHHHHHHHHTTSTTCE--EETTTTE--EEEETT-------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred -ceEEEeCCCCCEECCHHHHHHHHHhCCCcE--EcCCCCE--EEEECC-------CCCCcEEEEEC-CEEEEECHHHeee
Confidence 359999999999999999999998875432 2222222 334675 36899999995 5999999999998
Q ss_pred EeC--CCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeC-CCCEEEEeeC
Q 011649 431 VES--VRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDV-AGRRLGFGPG 477 (480)
Q Consensus 431 ~~~--~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~-~~~riGFa~~ 477 (480)
+.. ....|++ |.... ..+.||||++|||++|+|||+ +++|||||+.
T Consensus 280 ~~~~~~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 280 GPISTGSSSCFGGIQSSA-GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EESSTTCSEEEESEEEST-TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eecCCCCCeEEEEEEeCC-CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 763 3478995 66553 335899999999999999999 9999999984
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=7.4e-55 Score=439.45 Aligned_cols=302 Identities=25% Similarity=0.426 Sum_probs=249.4
Q ss_pred eeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCccccccCCCccccccc
Q 011649 119 TFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIH--CSQQRDPFFDPSKSKTFSKIPCNSTTCKILL 196 (480)
Q Consensus 119 ~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 196 (480)
.+|+.. .+..|+++|.||||+|++.|++||||+++||+|.+|.. |..+ +.|||++|+||+..
T Consensus 4 ~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~----------- 67 (329)
T 1htr_B 4 YEPMAY---MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH--SRFNPSESSTYSTN----------- 67 (329)
T ss_dssp CCGGGG---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEE-----------
T ss_pred eeeeEE---cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC--CcCCCccCCCeEEC-----------
Confidence 356662 67899999999999999999999999999999999985 8765 79999999999986
Q ss_pred cCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecCCC
Q 011649 197 EWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLDRG 273 (480)
Q Consensus 197 ~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~ 273 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+. | ...+||||||+.
T Consensus 68 ---------~-----~~~~i~Yg~gs-~~G~~~~D~v~~g~~~~------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (329)
T 1htr_B 68 ---------G-----QTFSLQYGSGS-LTGFFGYDTLTVQSIQV------PNQEFGLSENEPGTNFVYAQFDGIMGLAYP 126 (329)
T ss_dssp ---------E-----EEEEEEETTEE-EEEEEEEEEEEETTEEE------EEEEEEEESSCSSGGGGGCSCCEEEECCCC
T ss_pred ---------C-----cEEEEEeCCCC-eEEEEEeeeEEEcceEE------CceEEEEEEEccccccccCCCceEEecCCC
Confidence 2 79999999995 69999999999987664 89999999988663 3 578999999998
Q ss_pred Cccce------eecccc------eeEEEecCCCCC-ceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcc
Q 011649 274 PVSII------SKTNIS------YFFYCLHSPYGS-TGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGG 339 (480)
Q Consensus 274 ~~Sl~------sQl~~~------~FS~cL~~~~~~-~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg 339 (480)
.++.. .|+..+ .||+||.+.... .|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|++|+|++
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~ 202 (329)
T 1htr_B 127 ALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGG 202 (329)
T ss_dssp SCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETT
T ss_pred cccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECC
Confidence 87643 222222 299999987544 89999999997 7789999999986 679999999999999
Q ss_pred eEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCc
Q 011649 340 ERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGV 419 (480)
Q Consensus 340 ~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~ 419 (480)
+.+..... ..++||||||++++||+++|++|.+++.+.. ...+ .+..+|++ ...+|+|+|+|+| +
T Consensus 203 ~~~~~~~~---~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~~~g--~~~~~C~~-----~~~~P~i~f~f~g-~ 267 (329)
T 1htr_B 203 QASGWCSE---GCQAIVDTGTSLLTVPQQYMSALLQATGAQE----DEYG--QFLVNCNS-----IQNLPSLTFIING-V 267 (329)
T ss_dssp EECCTTTT---CEEEEECTTCCSEEEEGGGHHHHHHHHTCEE----CTTS--CEEECGGG-----GGGSCCEEEEETT-E
T ss_pred ceeeecCC---CceEEEecCCccEECCHHHHHHHHHHhCCee----cCCC--eEEEeCCC-----cccCCcEEEEECC-E
Confidence 87641111 2469999999999999999999999987642 1122 23446764 4578999999965 9
Q ss_pred EEEecCCCeEEEeCCCeEEE-EEEeCC---CCCC-eeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 420 DLELDVRGTLVVESVRQVCL-GFALLP---SDPN-SILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 420 ~~~l~~~~~~~~~~~~~~Cl-~~~~~~---~~~~-~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+++|++++|+++.. + .|+ +|.... ...+ .||||++|||++|++||++++|||||+++
T Consensus 268 ~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 268 EFPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 99999999999876 3 898 787653 1234 79999999999999999999999999864
No 18
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.7e-54 Score=443.09 Aligned_cols=311 Identities=23% Similarity=0.368 Sum_probs=250.5
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.||||+|++.|+|||||+++||+|.+|..|. +.|||++|+||+.. +
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~----~~f~~~~SsT~~~~--------------------~- 65 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID----TYFDTERSSTYRSK--------------------G- 65 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS----CCCCGGGCTTCEEE--------------------E-
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc----cCcccccCccceeC--------------------C-
Confidence 3467999999999999999999999999999999997774 68999999999987 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCcc--------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVS-------- 276 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~S-------- 276 (480)
|.|.+.|++|+ ++|.+++|+|+|++... . ...+.|+|..+..+.| ...+||||||+..++
T Consensus 66 ----~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~ 136 (383)
T 2ewy_A 66 ----FDVTVKYTQGS-WTGFVGEDLVTIPKGFN---T-SFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLET 136 (383)
T ss_dssp ----EEEEEECSSCE-EEEEEEEEEEEETTTEE---E-EEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred ----ceEEEEECCcE-EEEEEEEEEEEECCCcc---c-eeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccC
Confidence 78999999995 79999999999975432 1 0246789887766655 367999999998764
Q ss_pred ----ceeecccce-eEEEecC-------CCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEee
Q 011649 277 ----IISKTNISY-FFYCLHS-------PYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLP 343 (480)
Q Consensus 277 ----l~sQl~~~~-FS~cL~~-------~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~ 343 (480)
|++|..... ||+||.. .....|.|+|||+|+ ++.+++.|+|+.. ..+|.|.|++|+|+++.+.
T Consensus 137 ~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~ 212 (383)
T 2ewy_A 137 FFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEILKLEIGGQSLN 212 (383)
T ss_dssp HHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEEEEEETTEECC
T ss_pred HHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEEEEEECCEEcc
Confidence 445555432 9999863 123579999999997 7899999999987 5789999999999999988
Q ss_pred cCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCC-Cc-ccccccceecCCCcccccceEEEEEcCC---
Q 011649 344 LKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGK-GI-EDLFDTCYDLSAYKTVVVPKITIHFLGG--- 418 (480)
Q Consensus 344 i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~-~~-~~~~~~C~~~~~~~~~~~P~i~~~f~gg--- 418 (480)
++...+...++||||||++++||+++|++|++++.+.+.. +... +. ..+..+|++........+|+|+|+|+|+
T Consensus 213 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~ 291 (383)
T 2ewy_A 213 LDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLI-PEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSS 291 (383)
T ss_dssp CCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS-SCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTT
T ss_pred ccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhccc-ccCccccccccccccccCCcccHhhCCcEEEEECCCCCC
Confidence 7766554467999999999999999999999999987521 1111 10 0235689876544445799999999874
Q ss_pred --cEEEecCCCeEEEeC---CCeEEEEE--EeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 419 --VDLELDVRGTLVVES---VRQVCLGF--ALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 419 --~~~~l~~~~~~~~~~---~~~~Cl~~--~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
.+++|++++|+++.. .+..|++| .+. .+.||||++|||++|+|||++++|||||+++|+
T Consensus 292 ~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 292 RSFRITILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp EEEEEEECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred ceEEEEEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 379999999999863 35689864 332 246999999999999999999999999999994
No 19
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.2e-54 Score=436.09 Aligned_cols=293 Identities=22% Similarity=0.384 Sum_probs=245.9
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIH--CSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQD 205 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~--C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~ 205 (480)
.+.+|+++|.||||+|++.|++||||+++||+|.+|.. |..+ +.|||++|+||+..
T Consensus 9 ~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~-------------------- 66 (320)
T 4aa9_A 9 LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH--HRFDPRKSSTFRNL-------------------- 66 (320)
T ss_dssp CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEE--------------------
T ss_pred cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC--CCCCCCCCcCeEcC--------------------
Confidence 56899999999999999999999999999999999985 7755 79999999999987
Q ss_pred CCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecCCCCccc-----
Q 011649 206 KCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLDRGPVSI----- 277 (480)
Q Consensus 206 ~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~~~~Sl----- 277 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++...+. | ...+||||||+..++.
T Consensus 67 ~-----~~~~i~Yg~gs-~~G~~~~D~v~ig~~~v------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 134 (320)
T 4aa9_A 67 G-----KPLSIHYGTGS-MEGFLGYDTVTVSNIVD------PNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVP 134 (320)
T ss_dssp E-----EEEEEEETTEE-EEEEEEEEEEEETTEEE------EEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCC
T ss_pred C-----cEEEEEECCcE-EEEEEEEEEEEECCEee------cCeEEEEEEEcccccccccCcccEEecCcccccccCCCC
Confidence 2 79999999996 89999999999988664 89999999988763 3 4679999999987653
Q ss_pred -eeecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCcccc
Q 011649 278 -ISKTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYF 349 (480)
Q Consensus 278 -~sQl~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~ 349 (480)
+.|+..+ .||+||.+. ...|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|++|+|+++.+.++..
T Consensus 135 ~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~-- 207 (320)
T 4aa9_A 135 VFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACVGG-- 207 (320)
T ss_dssp HHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEESTTC--
T ss_pred HHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccCCC--
Confidence 3333322 299999986 4589999999998 7889999999976 67899999999999998865422
Q ss_pred CCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeE
Q 011649 350 TKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTL 429 (480)
Q Consensus 350 ~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~ 429 (480)
..+||||||++++||+++|++|.+++++.. ...+ .+..+|+ ....+|+|+|+|+| ++++|++++|+
T Consensus 208 --~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g--~~~~~C~-----~~~~~p~i~f~f~g-~~~~l~~~~y~ 273 (320)
T 4aa9_A 208 --CQAILDTGTSVLFGPSSDILKIQMAIGATE----NRYG--EFDVNCG-----NLRSMPTVVFEING-RDYPLSPSAYT 273 (320)
T ss_dssp --EEEEECTTCSSEEEEHHHHHHHHHHTTCEE----CTTS--CEEECGG-----GGGGCCCEEEEETT-EEEEECHHHHE
T ss_pred --cEEEEECCCCcEECCHHHHHHHHHHhCCcc----cCCC--cEEEeCC-----CCCcCceEEEEECC-EEEEECHHHhc
Confidence 469999999999999999999999886542 1122 2333554 35679999999975 99999999999
Q ss_pred EEeCCCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 430 VVESVRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 430 ~~~~~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
.+. ...|+ +|..... .+.||||++|||++|++||++++|||||+++
T Consensus 274 ~~~--~~~C~~~i~~~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 274 SKD--QGFCTSGFQGDNN-SELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEE--TTEEEESEEEETT-CCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCC--CCeEEEEEEcCCC-CCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 874 56898 6776432 3579999999999999999999999999874
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.2e-54 Score=438.02 Aligned_cols=300 Identities=20% Similarity=0.319 Sum_probs=246.9
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCC--CC---------CCCCCCCCCCCCCCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKP--CI---------HCSQQRDPFFDPSKSKTFSKIP 186 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~--C~---------~C~~~~~~~fdps~SsT~~~~~ 186 (480)
+.+|+.. ++.+|+++|.||||+|++.|++||||+++||+|.. |. .|..+ +.|||++|+||+..
T Consensus 3 v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~- 76 (342)
T 3pvk_A 3 VPVTLHN---EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQK--GTYDPSGSSASQDL- 76 (342)
T ss_dssp EEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTT--CCBCGGGCTTCEEE-
T ss_pred cceEEec---CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCC--CcCCCccCcceeec-
Confidence 5667776 77899999999999999999999999999998543 42 37644 79999999999987
Q ss_pred CCCccccccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCCCCCCc
Q 011649 187 CNSTTCKILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQNGASG 266 (480)
Q Consensus 187 C~s~~C~~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~G 266 (480)
+ |.|.+.|+||+.+.|.+++|+|+|++..+ +++.|||++... ..+|
T Consensus 77 -------------------~-----~~~~i~Yg~gs~~~G~~~~D~v~ig~~~v------~~~~fg~~~~~~----~~~G 122 (342)
T 3pvk_A 77 -------------------N-----TPFKIGYGDGSSSQGTLYKDTVGFGGVSI------KNQVLADVDSTS----IDQG 122 (342)
T ss_dssp -------------------E-----EEEEEECSSSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEES----SSSC
T ss_pred -------------------C-----CeEEEEecCCCeEEEEEEEEEEEECCEEe------cceEEEEEEccC----CCcc
Confidence 2 79999999998899999999999988664 899999999865 5899
Q ss_pred eeecCCCCc-------cceeecccce------eEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEE
Q 011649 267 IMGLDRGPV-------SIISKTNISY------FFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITL 332 (480)
Q Consensus 267 ilGLg~~~~-------Sl~sQl~~~~------FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l 332 (480)
|||||+... +++.||..+. ||+||.+.....|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|
T Consensus 123 ilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l 198 (342)
T 3pvk_A 123 ILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS----DRELRISL 198 (342)
T ss_dssp EEECSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEE
T ss_pred EEEecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc----cceEEEEE
Confidence 999999874 4555554432 9999988666689999999998 8899999999987 45899999
Q ss_pred eeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEE
Q 011649 333 TGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKIT 412 (480)
Q Consensus 333 ~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 412 (480)
++|+|+++.+..+. ..+||||||++++||+++|++|.+++.+.... ...+...+..+|+ .+|+|+
T Consensus 199 ~~i~v~g~~~~~~~-----~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~--~~~~~~~~~~~C~--------~~p~i~ 263 (342)
T 3pvk_A 199 GSVEVSGKTINTDN-----VDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ--DSNGNSFYEVDCN--------LSGDVV 263 (342)
T ss_dssp EEEEETTEEEEEEE-----EEEEECTTCSSEEECHHHHHHHHHHTTCEEEE--CTTSCEEEEECSC--------CCSEEE
T ss_pred eEEEECCEEecCCC-----ceEEEeCCCCCeecCHHHHHHHHHHcCCeecc--cCCCceEEEEecC--------CCCceE
Confidence 99999999987542 35999999999999999999999999776421 1111101344564 249999
Q ss_pred EEEcCCcEEEecCCCeEEEeC--CC---eEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 413 IHFLGGVDLELDVRGTLVVES--VR---QVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 413 ~~f~gg~~~~l~~~~~~~~~~--~~---~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
|+|++|++++|++++|+++.. .+ ..|+ +|... +.+|||++|||++|++||++++|||||+++|+
T Consensus 264 f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 264 FNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQVKYT 333 (342)
T ss_dssp EEESTTCEEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC
Confidence 999867999999999998732 22 6798 55552 36999999999999999999999999999995
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.3e-54 Score=443.24 Aligned_cols=299 Identities=22% Similarity=0.311 Sum_probs=249.6
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI--HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
..+|+... .+..|+++|.||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 52 ~~~pl~~~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~---------- 117 (375)
T 1miq_A 52 DVIELDDV--ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK--NLYDSSKSKSYEKD---------- 117 (375)
T ss_dssp BCCCGGGT--BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS--CCBCGGGCTTCEEE----------
T ss_pred ceEEcccC--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC--CcCCCccCCceEEC----------
Confidence 44677642 5789999999999999999999999999999999997 48765 79999999999986
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEec----CCCCC--CCCCceee
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDN----NTGDQ--NGASGIMG 269 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~----~~g~~--~~~~GilG 269 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++..+ ++ .|||++. .. .| ...+||||
T Consensus 118 ----------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v------~~-~Fg~~~~~~~~~~-~f~~~~~dGilG 173 (375)
T 1miq_A 118 ----------G-----TKVDITYGSGT-VKGFFSKDLVTLGHLSM------PY-KFIEVTDTDDLEP-IYSSVEFDGILG 173 (375)
T ss_dssp ----------E-----EEEEEEETTEE-EEEEEEEEEEEETTEEE------EE-EEEEEEECGGGTT-HHHHSCCCEEEE
T ss_pred ----------C-----cEEEEEeCCCe-EEEEEEEEEEEEcCceE------Cc-EEEEEEecccccc-ccccCCCceEEe
Confidence 2 79999999996 89999999999987664 88 9999998 54 44 57899999
Q ss_pred cCCCCcccee------ecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEE
Q 011649 270 LDRGPVSIIS------KTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGIS 336 (480)
Q Consensus 270 Lg~~~~Sl~s------Ql~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIs 336 (480)
||+..++... |+..+ .||+||++.....|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|+ |+
T Consensus 174 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~ 248 (375)
T 1miq_A 174 LGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VH 248 (375)
T ss_dssp CSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EE
T ss_pred CCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EE
Confidence 9998876432 22222 29999998754689999999997 7789999999976 679999999 99
Q ss_pred EcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEc
Q 011649 337 VGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFL 416 (480)
Q Consensus 337 Vgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~ 416 (480)
|+++.+ . ..++||||||++++||+++|++|.+++.+. ++...+. +..+|+. ..+|+|+|+|+
T Consensus 249 v~g~~~----~---~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~---~~~~~g~--~~~~C~~------~~~P~i~f~f~ 310 (375)
T 1miq_A 249 FGKQTM----E---KANVIVDSGTTTITAPSEFLNKFFANLNVI---KVPFLPF--YVTTCDN------KEMPTLEFKSA 310 (375)
T ss_dssp ETTEEE----E---EEEEEECTTBSSEEECHHHHHHHHHHHTCE---ECTTSSC--EEEETTC------TTCCCEEEECS
T ss_pred ECCEEc----c---cceEEecCCCccEEcCHHHHHHHHHHhCCc---ccCCCCe--EEEECCC------CCCCcEEEEEC
Confidence 999887 1 146999999999999999999999998764 3333322 4456763 57899999996
Q ss_pred CCcEEEecCCCeEEEeC--CCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 417 GGVDLELDVRGTLVVES--VRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 417 gg~~~~l~~~~~~~~~~--~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
| ++++|++++|+++.. +...|+ +|.+.....+.||||++|||++|+|||++++|||||+++
T Consensus 311 g-~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 311 N-NTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp S-CEEEECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred C-EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 5 999999999999875 346898 888765323589999999999999999999999999864
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.6e-53 Score=448.99 Aligned_cols=317 Identities=21% Similarity=0.353 Sum_probs=250.6
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCccccccCCCccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI---HCSQQRDPFFDPSKSKTFSKIPCNSTTCKI 194 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~---~C~~~~~~~fdps~SsT~~~~~C~s~~C~~ 194 (480)
..+|+... .+..|+++|.||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 42 ~~~~l~n~--~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~--~~y~~~~SsT~~~~--------- 108 (478)
T 1qdm_A 42 DIVALKNY--MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH--SRYKAGASSTYKKN--------- 108 (478)
T ss_dssp CSGGGCCG--GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS--CCBCGGGCTTCBCC---------
T ss_pred ceEEeEec--cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC--CCCCcccCCCeeeC---------
Confidence 45677652 5689999999999999999999999999999999996 49876 78999999999875
Q ss_pred cccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecC
Q 011649 195 LLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLD 271 (480)
Q Consensus 195 ~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg 271 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ +++.|||++...+. | ..++||||||
T Consensus 109 -----------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v------~~~~Fg~a~~~~~~~f~~~~~dGIlGLg 165 (478)
T 1qdm_A 109 -----------G-----KPAAIQYGTGS-IAGYFSEDSVTVGDLVV------KDQEFIEATKEPGITFLVAKFDGILGLG 165 (478)
T ss_dssp -----------C-----CEEEEEETTEE-EEEEEEEEEEEETTEEE------EEEEEEEEEECCBSHHHHCSSSEEEECS
T ss_pred -----------C-----cEEEEEcCCCC-eEEEEEEEEEEECCeEE------CCEEEEEEEecCCcccccccccceeccc
Confidence 3 78999999996 89999999999987664 89999999987653 3 5789999999
Q ss_pred CCCccc----------eeeccc--ceeEEEecCCC--CCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEE
Q 011649 272 RGPVSI----------ISKTNI--SYFFYCLHSPY--GSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGIS 336 (480)
Q Consensus 272 ~~~~Sl----------~sQl~~--~~FS~cL~~~~--~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIs 336 (480)
+..+|+ ++|... ..||+||++.. ...|.|+|||+|+ ++.+++.|+|+.. .++|.|.|++|+
T Consensus 166 ~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~ 241 (478)
T 1qdm_A 166 FKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVL 241 (478)
T ss_dssp CGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEE
T ss_pred ccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEE
Confidence 988763 344222 22999998752 3489999999997 7789999999987 679999999999
Q ss_pred EcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHh----------------------hhccC--------
Q 011649 337 VGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRM----------------------KKYKM-------- 386 (480)
Q Consensus 337 Vgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~----------------------~~~~~-------- 386 (480)
|+++.+.+... ..++||||||++++||+++|++|.++|.+.. ...+.
T Consensus 242 v~g~~~~~~~~---~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~ig 318 (478)
T 1qdm_A 242 VGGKSTGFCAG---GCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVG 318 (478)
T ss_dssp ETTEECSTTTT---CEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTT
T ss_pred ECCEEEeecCC---CceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccc
Confidence 99998765433 2469999999999999999999999886420 00000
Q ss_pred ------C-----------C-------Cc------------------------------ccccccceecC---------CC
Q 011649 387 ------G-----------K-------GI------------------------------EDLFDTCYDLS---------AY 403 (480)
Q Consensus 387 ------~-----------~-------~~------------------------------~~~~~~C~~~~---------~~ 403 (480)
. . .. +...+.|+.++ |.
T Consensus 319 lC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~ 398 (478)
T 1qdm_A 319 LCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCG 398 (478)
T ss_dssp CC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGG
T ss_pred ccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecc
Confidence 0 0 00 00123454433 33
Q ss_pred cccccceEEEEEcCCcEEEecCCCeEEEeCC--CeEEE-EEEeCC---CCCCeeeechhhhceeEEEEeCCCCEEEEeeC
Q 011649 404 KTVVVPKITIHFLGGVDLELDVRGTLVVESV--RQVCL-GFALLP---SDPNSILLGNVQQRGYEVHYDVAGRRLGFGPG 477 (480)
Q Consensus 404 ~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~--~~~Cl-~~~~~~---~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~ 477 (480)
....+|+|+|+|+| ++|+|+|++|+++.+. ...|+ +|...+ ...+.||||++|||++|+|||++++|||||++
T Consensus 399 ~~~~lP~i~f~~gg-~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 399 SLGSMPDIEFTIGG-KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp GGTTCCCEEEEETT-EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cccccccEEEEECC-EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 34579999999965 9999999999998754 46898 577543 12357999999999999999999999999986
Q ss_pred C
Q 011649 478 N 478 (480)
Q Consensus 478 ~ 478 (480)
.
T Consensus 478 ~ 478 (478)
T 1qdm_A 478 A 478 (478)
T ss_dssp C
T ss_pred C
Confidence 3
No 23
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=7.9e-54 Score=442.47 Aligned_cols=310 Identities=20% Similarity=0.348 Sum_probs=249.5
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.||||+|++.|+|||||+++||+|.+|..|. +.|||++|+||+.. +
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~----~~y~~~~SsT~~~~--------------------~- 73 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH----RYYQRQLSSTYRDL--------------------R- 73 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS----CCCCGGGCTTCEEE--------------------E-
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc----CCcCcccCCCceeC--------------------C-
Confidence 4568999999999999999999999999999999997664 68999999999987 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEee-cCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCcc-------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQE-VNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVS------- 276 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~-~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~S------- 276 (480)
|.|.+.|++|+ ++|.+++|+|+|++ ... - ..+.|+|.....+.| ...+||||||+..++
T Consensus 74 ----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~---~--~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~ 143 (395)
T 2qp8_A 74 ----KGVYVPYTQGK-WEGELGTDLVSIPHGPNV---T--VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLE 143 (395)
T ss_dssp ----EEEEEECSSCE-EEEEEEEEEEECTTSCSC---E--EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred ----ceEEEEECCcE-EEEEEEeEEEEECCCCCc---e--EEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCC
Confidence 78999999995 69999999999973 332 0 136788887665555 367999999998764
Q ss_pred -----ceeecccce-eEEEecCC----------CCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcc
Q 011649 277 -----IISKTNISY-FFYCLHSP----------YGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGG 339 (480)
Q Consensus 277 -----l~sQl~~~~-FS~cL~~~----------~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg 339 (480)
|++|..... ||+||.+. ....|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|++|+|++
T Consensus 144 ~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g 219 (395)
T 2qp8_A 144 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEING 219 (395)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETT
T ss_pred CHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEEECC
Confidence 344544333 99999752 13579999999997 7889999999986 578999999999999
Q ss_pred eEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCC-Cc-ccccccceecCCCcccccceEEEEEcC
Q 011649 340 ERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGK-GI-EDLFDTCYDLSAYKTVVVPKITIHFLG 417 (480)
Q Consensus 340 ~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~-~~-~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (480)
+.+.++...|...++||||||++++||+++|++|.+++.+.+.. +... +. .....+|+.........+|+|+|+|+|
T Consensus 220 ~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g 298 (395)
T 2qp8_A 220 QDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMG 298 (395)
T ss_dssp EECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEEC
T ss_pred EEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhccc-ccCCccccccccccccccccchHhhCCcEEEEEcc
Confidence 99887665554467999999999999999999999999987531 1111 10 012468987655444579999999987
Q ss_pred Cc-----EEEecCCCeEEEeCC----CeEEEE--EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 418 GV-----DLELDVRGTLVVESV----RQVCLG--FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 418 g~-----~~~l~~~~~~~~~~~----~~~Cl~--~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
+. +++|++++|+++... ...|++ +.+.. +.||||++|||++|+|||++++|||||+++|+
T Consensus 299 ~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~---~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 299 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS---TGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp SSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES---SCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred CCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCC---CcEEEChHHhCCeeEEEECCCCEEEEEeccCC
Confidence 53 799999999998642 358974 44432 46999999999999999999999999999995
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.3e-54 Score=448.62 Aligned_cols=300 Identities=21% Similarity=0.302 Sum_probs=248.9
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI--HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
..+|+... .+..|+++|.||||+|++.|++||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 128 ~~~~L~n~--~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~--~~ydps~SsT~~~~---------- 193 (453)
T 2bju_A 128 DNIELVDF--QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK--HLYDSSKSRTYEKD---------- 193 (453)
T ss_dssp EEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS--CCBCGGGCTTCEEE----------
T ss_pred CceeeEec--CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC--CcCCCccCCceeEC----------
Confidence 45777642 6789999999999999999999999999999999997 48765 79999999999986
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCC--CC-C--CCCCceeec
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNT--GD-Q--NGASGIMGL 270 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~--g~-~--~~~~GilGL 270 (480)
+ |.|.+.|+||+ ++|.+++|+|+|++..+ + +.|||++... +. | ...+|||||
T Consensus 194 ----------~-----~~~~i~YgdGs-~~G~~~~Dtv~ig~~~v------~-~~Fg~a~~~~~~g~~f~~~~~dGIlGL 250 (453)
T 2bju_A 194 ----------G-----TKVEMNYVSGT-VSGFFSKDLVTVGNLSL------P-YKFIEVIDTNGFEPTYTASTFDGILGL 250 (453)
T ss_dssp ----------E-----EEEEEECSSSE-EEEEEEEEEEEETTEEE------E-EEEEEEEECGGGTTHHHHSSCCEEEEC
T ss_pred ----------C-----cEEEEEcCCCC-eEEEEEEEEEEEeCcEE------E-EEEEEEEEecccCccccccCCceeEec
Confidence 2 79999999996 89999999999987664 8 9999999986 54 3 578999999
Q ss_pred CCCCcccee------ecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEE
Q 011649 271 DRGPVSIIS------KTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISV 337 (480)
Q Consensus 271 g~~~~Sl~s------Ql~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsV 337 (480)
|+..++... |+..+ .||+||++.+...|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|+ |+|
T Consensus 251 g~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~V 325 (453)
T 2bju_A 251 GWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHV 325 (453)
T ss_dssp SCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEE
T ss_pred cCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEE
Confidence 998776432 22222 29999998755689999999997 7889999999987 679999999 999
Q ss_pred cceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcC
Q 011649 338 GGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLG 417 (480)
Q Consensus 338 gg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g 417 (480)
++ .+ + . ..++||||||++++||+++|++|.+++.+. +...+. .+..+|+. ..+|+|+|+|+|
T Consensus 326 gg-~~-~--~---~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~-~~~v~C~~------~~~P~itf~fgg 387 (453)
T 2bju_A 326 GN-IM-L--E---KANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLP-FYVTLCNN------SKLPTFEFTSEN 387 (453)
T ss_dssp TT-EE-E--E---EEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSS-CEEEETTC------TTCCCEEEECSS
T ss_pred Cc-EE-e--c---cccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCc-eEEEecCC------CCCCcEEEEECC
Confidence 99 43 2 1 246999999999999999999999887653 222221 23446653 578999999965
Q ss_pred CcEEEecCCCeEEEeC--CCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 418 GVDLELDVRGTLVVES--VRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 418 g~~~~l~~~~~~~~~~--~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
++++|++++|+++.. +...|+ +|.+.+...+.||||++|||++|+|||++++|||||+++
T Consensus 388 -~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 388 -GKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp -CEEEECHHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred -EEEEECHHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999999999875 346898 788765434589999999999999999999999999864
No 25
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6.3e-54 Score=434.54 Aligned_cols=305 Identities=20% Similarity=0.348 Sum_probs=250.3
Q ss_pred cceeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCccccccCCCcc
Q 011649 116 KAFTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI----HCSQQRDPFFDPSKSKTFSKIPCNSTT 191 (480)
Q Consensus 116 ~~~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~----~C~~~~~~~fdps~SsT~~~~~C~s~~ 191 (480)
+.+.+|+..- .+.+|+++|.||||+|++.|++||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 6 ~~~~~~l~n~--~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~--~~y~~~~SsT~~~~------ 75 (341)
T 3k1w_A 6 TTSSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHN------ 75 (341)
T ss_dssp BCEEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS--CCBCGGGCTTCEEE------
T ss_pred CCccccceEc--cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC--CCCCCCcCcCeeEC------
Confidence 3467788763 5789999999999999999999999999999999998 48655 79999999999875
Q ss_pred ccccccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCcee
Q 011649 192 CKILLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIM 268 (480)
Q Consensus 192 C~~~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~Gil 268 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++.. + ++.|||++...+. | ...+|||
T Consensus 76 --------------~-----~~~~i~Yg~gs-~~G~~~~D~v~ig~~~------v-~~~fg~~~~~~~~~~~~~~~~Gil 128 (341)
T 3k1w_A 76 --------------G-----TELTLRYSTGT-VSGFLSQDIITVGGIT------V-TQMFGEVTEMPALPFMLAEFDGVV 128 (341)
T ss_dssp --------------E-----EEEEEEETTEE-EEEEEEEEEEEETTEE------E-EEEEEEEEECCHHHHTTCSSSEEE
T ss_pred --------------C-----CEEEEEECCcE-EEEEEEEEEEEECCce------e-eEEEEEEEEccccccccCCcceEE
Confidence 2 79999999996 8999999999997643 3 8999999988753 3 5679999
Q ss_pred ecCCCCcc------ceeecccc------eeEEEecCCC----CCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEE
Q 011649 269 GLDRGPVS------IISKTNIS------YFFYCLHSPY----GSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHIT 331 (480)
Q Consensus 269 GLg~~~~S------l~sQl~~~------~FS~cL~~~~----~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~ 331 (480)
|||+...+ ++.|+..+ .||+||.+.. ...|.|+|||+|+ ++.+++.|+|+.. +.+|.|.
T Consensus 129 GLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~ 204 (341)
T 3k1w_A 129 GMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQ 204 (341)
T ss_dssp ECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEE
T ss_pred ECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEE
Confidence 99998775 23333322 2999998864 2389999999998 7889999999986 6799999
Q ss_pred EeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceE
Q 011649 332 LTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKI 411 (480)
Q Consensus 332 l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 411 (480)
+++|+|+++.+..+.. ..+||||||++++||+++|++|.+++.+.. . .. .+..+|. ....+|+|
T Consensus 205 l~~i~v~~~~~~~~~~----~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~---~-~~---g~~~~C~-----~~~~~p~i 268 (341)
T 3k1w_A 205 MKGVSVGSSTLLCEDG----CLALVDTGASYISGSTSSIEKLMEALGAKK---R-LF---DYVVKCN-----EGPTLPDI 268 (341)
T ss_dssp ECCEEETTEEEECTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE---C-SS---CEEEEGG-----GGGGCCCE
T ss_pred EeEEEECCEEeecCCC----CEEEEECCCChhcCCHHHHHHHHHHcCCee---c-CC---CeEEeCC-----CCCcCCcE
Confidence 9999999997654432 469999999999999999999999986642 1 11 1233454 45678999
Q ss_pred EEEEcCCcEEEecCCCeEEEeC--CCeEEE-EEEeCC---CCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 412 TIHFLGGVDLELDVRGTLVVES--VRQVCL-GFALLP---SDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 412 ~~~f~gg~~~~l~~~~~~~~~~--~~~~Cl-~~~~~~---~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+|+|+| ++++|++++|+++.. .+..|+ +|...+ ...+.||||++|||++|+|||++++|||||+++
T Consensus 269 ~f~f~g-~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 269 SFHLGG-KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEEETT-EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECC-EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999975 999999999998764 367898 777642 224579999999999999999999999999874
No 26
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.8e-53 Score=438.34 Aligned_cols=314 Identities=21% Similarity=0.347 Sum_probs=248.2
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
....|+++|.||||+|++.|+|||||+++||+|.+| |.. ++.|||++|+||+.. +
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~--~~~y~~~~SsT~~~~--------------------~- 80 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL--HRYYQRQLSSTYRDL--------------------R- 80 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC--SCCCCGGGCTTCEEE--------------------E-
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc--cCCcCcccCcccccC--------------------C-
Confidence 346899999999999999999999999999999998 443 378999999999987 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCccce------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSII------ 278 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~------ 278 (480)
|.|.+.|++|+ +.|.+++|+|+|++... + ...+.|+|.....+.| ...+||||||+..++..
T Consensus 81 ----~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~---~-~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 151 (402)
T 3vf3_A 81 ----KGVYVPYTQGK-WEGELGTDLVSIPHGPN---V-TVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEP 151 (402)
T ss_dssp ----EEEEEECSSCE-EEEEEEEEEEECTTSCS---C-EEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred ----CEEEEEECcEE-EEEEEEEEEEEECCccc---c-ceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCc
Confidence 79999999995 79999999999984322 1 0235588888766655 46799999999876543
Q ss_pred ------eecccce-eEEEecCC----------CCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcce
Q 011649 279 ------SKTNISY-FFYCLHSP----------YGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGE 340 (480)
Q Consensus 279 ------sQl~~~~-FS~cL~~~----------~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~ 340 (480)
+|..... ||+||.+. ....|.|+|||+|+ ++.+++.|+|+.. +.+|.|.+++|+|+++
T Consensus 152 ~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~ 227 (402)
T 3vf3_A 152 FFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQ 227 (402)
T ss_dssp HHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEETTE
T ss_pred HHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEECCE
Confidence 2333222 99999642 23479999999998 7889999999987 6789999999999999
Q ss_pred EeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCc-ccccccceecCCCcccccceEEEEEcCCc
Q 011649 341 RLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGI-EDLFDTCYDLSAYKTVVVPKITIHFLGGV 419 (480)
Q Consensus 341 ~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~P~i~~~f~gg~ 419 (480)
.+.++...+....+||||||++++||+++|++|.+++.+.....+..... ..++.+|+.........+|+|+|+|+|+.
T Consensus 228 ~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~ 307 (402)
T 3vf3_A 228 DLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEV 307 (402)
T ss_dssp ECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSS
T ss_pred EecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCC
Confidence 99876654434679999999999999999999999999985311111111 12357999876544457999999998753
Q ss_pred -----EEEecCCCeEEEeCCC----eEEEEEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 420 -----DLELDVRGTLVVESVR----QVCLGFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 420 -----~~~l~~~~~~~~~~~~----~~Cl~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
+++|++++|+++.... ..|++|..... .+.||||++|||++|+|||++++|||||+++|+
T Consensus 308 ~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 308 TNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp TTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTC
T ss_pred CCceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccC
Confidence 5999999999987532 58986432211 246999999999999999999999999999995
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=6.5e-53 Score=443.27 Aligned_cols=313 Identities=20% Similarity=0.334 Sum_probs=251.8
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.||||+|++.|+|||||+++||+|.+| |.. ++.|||++|+||+.. +
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~--~~~y~~~~SsT~~~~--------------------~- 126 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL--HRYYQRQLSSTYRDL--------------------R- 126 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC--SCCCCGGGCTTCEEE--------------------E-
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc--CCcccCCCCCCcccC--------------------C-
Confidence 456899999999999999999999999999999998 543 378999999999987 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCccce------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSII------ 278 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~------ 278 (480)
|.|.+.|++|+ +.|.+++|+|+|++... +. ..+.|+|+....+.| ...+||||||+..++..
T Consensus 127 ----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~---~~-~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 197 (455)
T 3lpj_A 127 ----KGVYVPYTQGK-WEGELGTDLVSIPHGPN---VT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEP 197 (455)
T ss_dssp ----EEEEEECSSCE-EEEEEEEEEEECTTSCS---CE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred ----ccEEEEeCCeE-EEEEEEEEEEEECCCcc---ee-eEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCc
Confidence 79999999995 69999999999985321 10 246789988876655 46799999999876543
Q ss_pred ------eecccce-eEEEecCC----------CCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcce
Q 011649 279 ------SKTNISY-FFYCLHSP----------YGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGE 340 (480)
Q Consensus 279 ------sQl~~~~-FS~cL~~~----------~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~ 340 (480)
+|..... ||+||.+. ....|.|+|||+|+ ++.+++.|+|+.. ..+|.|.+++|+|+++
T Consensus 198 ~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~ 273 (455)
T 3lpj_A 198 FFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQ 273 (455)
T ss_dssp HHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTE
T ss_pred HHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEECCE
Confidence 3333322 99999753 23479999999998 7889999999987 6789999999999999
Q ss_pred EeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCC-c-ccccccceecCCCcccccceEEEEEcCC
Q 011649 341 RLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKG-I-EDLFDTCYDLSAYKTVVVPKITIHFLGG 418 (480)
Q Consensus 341 ~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~-~-~~~~~~C~~~~~~~~~~~P~i~~~f~gg 418 (480)
.+.++...+....+||||||++++||+++|++|.++|.+.+.. ..... . ..++.+|+.........+|+|+|+|+|+
T Consensus 274 ~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~ 352 (455)
T 3lpj_A 274 DLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGE 352 (455)
T ss_dssp ECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT-SCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECS
T ss_pred EccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccc-cccCcccccCcceecccccCCchhcCCcEEEEEcCC
Confidence 9987665544467999999999999999999999999998531 11111 0 1235789986654455799999999885
Q ss_pred c-----EEEecCCCeEEEeCCC----eEEEEEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 419 V-----DLELDVRGTLVVESVR----QVCLGFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 419 ~-----~~~l~~~~~~~~~~~~----~~Cl~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
. +++|++++|+++.... ..|++|..... .+.||||++|||++|+|||++++|||||+++|+
T Consensus 353 ~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 353 VTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp STTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred CcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccc
Confidence 4 5999999999987532 58997533221 247999999999999999999999999999994
No 28
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=4.2e-53 Score=426.84 Aligned_cols=302 Identities=16% Similarity=0.236 Sum_probs=244.6
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI--HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
+..|+... .+..|+++|.|| +|++.|++||||+++||+|.+|. .|..+.++.|||++| ||+..
T Consensus 7 ~~~~l~n~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~---------- 71 (330)
T 1yg9_A 7 LYKLVHVF--INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISD---------- 71 (330)
T ss_dssp SCSCEEEE--ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEE----------
T ss_pred eEeeeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEEC----------
Confidence 44566542 567899999999 89999999999999999999998 494334489999999 99875
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC--CCCCceeecCCC
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ--NGASGIMGLDRG 273 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~--~~~~GilGLg~~ 273 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++..+ +++.|||++.....| ...+||||||+.
T Consensus 72 ----------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~------~~~~fg~~~~~~~~f~~~~~~GilGLg~~ 129 (330)
T 1yg9_A 72 ----------G-----NVQVKFFDTGS-AVGRGIEDSLTISQLTT------SQQDIVLADELSQEVCILSADVVVGIAAP 129 (330)
T ss_dssp ----------E-----EEEEEETTTEE-EEEEEEEEEEEETTEEE------EEEEEEEEEEECTHHHHTTCSEEEECSCT
T ss_pred ----------C-----CEEEEEECCce-EEEEEEEEEEEECCEEE------cCeEEEEEEEcccccccccCceEEEcCcc
Confidence 2 78999999995 59999999999987664 899999999883334 578999999998
Q ss_pred Ccc-------c----eeeccc-ceeEEEecCCCCC--ceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEc
Q 011649 274 PVS-------I----ISKTNI-SYFFYCLHSPYGS--TGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVG 338 (480)
Q Consensus 274 ~~S-------l----~sQl~~-~~FS~cL~~~~~~--~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVg 338 (480)
.++ + .+|... ..||+||.+.... .|.|+|||+|+ ++.+++.|+|+.. +.+|.|.|++|+|+
T Consensus 130 ~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~ 205 (330)
T 1yg9_A 130 GCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIG 205 (330)
T ss_dssp TSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEET
T ss_pred hhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEEC
Confidence 877 3 334222 2299999886333 89999999998 7889999999985 67999999999999
Q ss_pred ceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccc-cccceecCCCcccccceEEEEEcC
Q 011649 339 GERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDL-FDTCYDLSAYKTVVVPKITIHFLG 417 (480)
Q Consensus 339 g~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~P~i~~~f~g 417 (480)
++.+. . . ...+||||||++++||+++|++|.+++++.. . ..+...+ ..+|+ ....+|+|+|+|+
T Consensus 206 ~~~~~-~-~---~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~-~~g~~~~~~~~C~-----~~~~~p~i~f~fg- 270 (330)
T 1yg9_A 206 DTTVA-P-A---GTQAIIDTSKAIIVGPKAYVNPINEAIGCVV---E-KTTTRRICKLDCS-----KIPSLPDVTFVIN- 270 (330)
T ss_dssp TEEEE-C-T---TCEEEECTTCSSEEEEHHHHHHHHHHHTCEE---E-ECSSCEEEEECGG-----GGGGSCCEEEEET-
T ss_pred CEEEc-C-C---CcEEEEecCCccccCCHHHHHHHHHHhCCcc---c-CCCceEEEEEECC-----CccccCcEEEEEC-
Confidence 98875 2 1 2469999999999999999999999986542 1 1120011 23454 3457899999995
Q ss_pred CcEEEecCCCeEEEeCCCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 418 GVDLELDVRGTLVVESVRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 418 g~~~~l~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
|++++|++++|+++. +..|+ +|...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 271 g~~~~l~~~~y~~~~--~~~C~~~i~~~~-~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 271 GRNFNISSQYYIQQN--GNLCYSGFQPCG-HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp TEEEEECHHHHEEEE--TTEEEESEEEET-TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHhcccC--CCcEEEEEEeCC-CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 599999999999987 56898 777653 23579999999999999999999999999864
No 29
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=5.4e-53 Score=424.81 Aligned_cols=293 Identities=19% Similarity=0.295 Sum_probs=240.0
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.|| +|++.|+|||||+++||+|.+|..|..+.++.|||++|+ ++.. +
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~--------------------~- 68 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKID--------------------G- 68 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEE--------------------E-
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccC--------------------C-
Confidence 678999999999 899999999999999999999987544445899999998 5432 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCccce------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSII------ 278 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~------ 278 (480)
|.|.+.|+||+.++|.+++|+|+|++..+ +++.|||++...+.| ...+||||||+..++.+
T Consensus 69 ----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~ 138 (323)
T 1izd_A 69 ----ATWSISYGDGSSASGDVYKDKVTVGGVSY------DSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQK 138 (323)
T ss_dssp ----EEEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCC
T ss_pred ----CeEEEEcCCCCeEEEEEEEEEEEECCEEE------CceEEEEEEeccccccccCCCceEEecCcccccccCCCCCC
Confidence 79999999998799999999999987664 899999999876544 46899999999877653
Q ss_pred -------eecccceeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccC
Q 011649 279 -------SKTNISYFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFT 350 (480)
Q Consensus 279 -------sQl~~~~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 350 (480)
+|+....||+||.+. ..|.|+|||+|+ ++.+++.|+|+... ..+|.|.|++|+|++ .+. ...
T Consensus 139 ~~~~~l~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~--~~~-- 208 (323)
T 1izd_A 139 TFFDNVKSSLSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSS--SDS-- 208 (323)
T ss_dssp CHHHHHGGGSSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEE--CCC--
T ss_pred CHHHHHHHhccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-ccc--CCC--
Confidence 243333399999864 579999999997 78899999999752 578999999999999 543 222
Q ss_pred CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEE
Q 011649 351 KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLV 430 (480)
Q Consensus 351 ~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~ 430 (480)
.++||||||++++||+++|++|.+++.++. +....+. +..+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 209 -~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g~--~~~~C~-------~~~P~i~f~fg-g~~~~i~~~~~~~ 275 (323)
T 1izd_A 209 -ITGIADTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQGG--YVFPSS-------ASLPDFSVTIG-DYTATVPGEYISF 275 (323)
T ss_dssp -EEEEECTTCCSEEECHHHHHHHHTTSTTCE--EETTTTE--EEEETT-------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred -ceEEEeCCCcceeCCHHHHHHHHHhCCCcE--EcCcCCE--EEEECC-------CCCceEEEEEC-CEEEecCHHHeEE
Confidence 469999999999999999999998885432 2222222 233564 36899999995 5999999999998
Q ss_pred EeCCCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 431 VESVRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 431 ~~~~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+..++..|++ |.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 276 ~~~~~~~C~~~i~~~~-~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 276 ADVGNGQTFGGIQSNS-GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EECSTTEEEESEEECT-TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecCCCCeEEEEEEcCC-CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 8755678995 77653 23579999999999999999999999999864
No 30
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=9.8e-53 Score=439.44 Aligned_cols=299 Identities=19% Similarity=0.283 Sum_probs=247.6
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI--HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
..+|+... .+.+|+++|.||||+|++.|++||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 127 ~~~pL~n~--~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~--~~ydps~SsT~~~~---------- 192 (451)
T 3qvc_A 127 DNVELKDL--ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK--NHYDSSKSKTYEKD---------- 192 (451)
T ss_dssp CCCCGGGG--BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS--CCBCGGGCTTCEEE----------
T ss_pred Cccceeec--CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC--CCCCCCCCcccccC----------
Confidence 45666542 5788999999999999999999999999999999996 49765 79999999999976
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEec----CCCCC--CCCCceee
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDN----NTGDQ--NGASGIMG 269 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~----~~g~~--~~~~GilG 269 (480)
+ |.|.+.|+||+ +.|.+++|+|+|++..+ + +.|||++. ..+ | ...+||||
T Consensus 193 ----------~-----~~f~i~YgdGs-~~G~~~~Dtv~igg~~v------~-~~Fg~a~~t~~~~~~-f~~~~~dGILG 248 (451)
T 3qvc_A 193 ----------D-----TPVKLTSKAGT-ISGIFSKDLVTIGKLSV------P-YKFIEMTEIVGFEPF-YSESDVDGVFG 248 (451)
T ss_dssp ----------E-----EEEEEECSSEE-EEEEEEEEEEEETTEEE------E-EEEEEEEEEEECTTH-HHHSCCCEEEE
T ss_pred ----------C-----CEEEEEECCCE-EEEEEEEEEEEECCEEE------E-EEEEEEEeccccCCC-ccCCCCCEEEe
Confidence 2 79999999996 99999999999988765 8 99999998 666 5 56899999
Q ss_pred cCCCCcc------ceeecccc------eeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEE
Q 011649 270 LDRGPVS------IISKTNIS------YFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGIS 336 (480)
Q Consensus 270 Lg~~~~S------l~sQl~~~------~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIs 336 (480)
||++.++ ++.|+..+ .||+||.+.....|.|+|||+|+ ++.+++.|+|+.. +.+|.|.++ |+
T Consensus 249 Lg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~ 323 (451)
T 3qvc_A 249 LGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VH 323 (451)
T ss_dssp CSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EE
T ss_pred cCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EE
Confidence 9998754 33344333 29999998766689999999998 7889999999986 679999999 99
Q ss_pred EcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEc
Q 011649 337 VGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFL 416 (480)
Q Consensus 337 Vgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~ 416 (480)
|+++ . .. ...+||||||++++||++++++|.+++.+.. ....+ .+..+| . ...+|+|+|+|+
T Consensus 324 Vgg~-~--~~----~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~---~~~~g--~y~v~C-----~-~~~~P~itf~fg 385 (451)
T 3qvc_A 324 FGNV-S--SK----KANVILDSATSVITVPTEFFNQFVESASVFK---VPFLS--LYVTTC-----G-NTKLPTLEYRSP 385 (451)
T ss_dssp ETTE-E--EE----EEEEEECTTBSSEEECHHHHHHHHTTTTCEE---CTTSS--CEEEET-----T-CTTCCCEEEEET
T ss_pred ECCc-c--CC----CceEEEeCCCccccCCHHHHHHHHHHcCCee---cCCCC--eEEeeC-----C-cCcCCcEEEEEC
Confidence 9998 1 11 1459999999999999999999999886542 21122 223345 4 467899999997
Q ss_pred CCcEEEecCCCeEEEeC--CCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 417 GGVDLELDVRGTLVVES--VRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 417 gg~~~~l~~~~~~~~~~--~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
| .+++|++++|+++.. ....|+ +|.+.+...+.||||++|||++|+|||.+++|||||+++
T Consensus 386 g-~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 386 N-KVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp T-EEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred C-EEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 5 999999999999875 357898 777765324689999999999999999999999999864
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-52 Score=421.47 Aligned_cols=294 Identities=20% Similarity=0.292 Sum_probs=240.5
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.|| +|++.|++||||+++||+|.+|..|..+.++.|||++|+ ++.. +
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~--------------------~- 67 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLS--------------------G- 67 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECT--------------------T-
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccC--------------------C-
Confidence 678999999999 899999999999999999999988654555899999998 4421 3
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCccce------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSII------ 278 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~------ 278 (480)
|.|.+.|+||+.++|.+++|+|+|++..+ +++.|||++...+.| ...+||||||+..++..
T Consensus 68 ----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~ 137 (325)
T 1ibq_A 68 ----YSWDISYGDGSSASGDVYRDTVTVGGVTT------NKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQT 137 (325)
T ss_dssp ----CBEEEECSSSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCC
T ss_pred ----CEEEEEeCCCCEEEEEEEEeEEEECCEEE------cceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCC
Confidence 89999999998799999999999987664 899999999876544 46899999999876642
Q ss_pred ---eecc----cceeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccC
Q 011649 279 ---SKTN----ISYFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFT 350 (480)
Q Consensus 279 ---sQl~----~~~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 350 (480)
+|+. ...||+||.+. ..|.|+|||+|+ ++.+++.|+|+... ..+|.|.|++|+|+++.+. ..
T Consensus 138 ~~~~~l~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~--~~--- 207 (325)
T 1ibq_A 138 TFFDTVKSQLDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSS--SS--- 207 (325)
T ss_dssp CHHHHHGGGSSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCB--SC---
T ss_pred CHHHHHHHhcCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeecc--CC---
Confidence 3433 23399999874 589999999998 88999999999752 5689999999999998763 22
Q ss_pred CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEE
Q 011649 351 KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLV 430 (480)
Q Consensus 351 ~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~ 430 (480)
..++||||||++++||+++|++|.+++.++. +....+. +..+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 208 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g~--~~~~C~-------~~~P~i~f~fg-g~~~~i~~~~~~~ 275 (325)
T 1ibq_A 208 GFSAIADTGTTLILLDDEIVSAYYEQVSGAQ--ESYEAGG--YVFSCS-------TDLPDFTVVIG-DYKAVVPGKYINY 275 (325)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHTTSTTCB--CCSSSSS--CEEETT-------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred CceEEEeCCCCcEeCCHHHHHHHHHhCCCce--EcCcCCe--EEEEcC-------CCCCcEEEEEC-CEEEEECHHHhcc
Confidence 2469999999999999999999999885432 2222222 333675 36899999995 5999999999998
Q ss_pred EeC--CCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 431 VES--VRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 431 ~~~--~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+.. +...|++ |.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 276 ~~~~~~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 276 APVSTGSSTCYGGIQSNS-GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EESSTTCSEEEESEEECT-TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cccCCCCCeEEEEEEcCC-CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 763 3378985 66653 33579999999999999999999999999874
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-52 Score=422.77 Aligned_cols=297 Identities=21% Similarity=0.304 Sum_probs=239.4
Q ss_pred eeeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCcccccccc
Q 011649 118 FTFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLE 197 (480)
Q Consensus 118 ~~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~ 197 (480)
.++|+.+ .+..|+++|.||||+|++.|+|||||+++||+|. +.|||++|+++.
T Consensus 3 ~~~~l~n---~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~-------------- 55 (340)
T 1wkr_A 3 GSVPATN---QLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSAT-------------- 55 (340)
T ss_dssp EEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEE--------------
T ss_pred ccEeeec---cCcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCcccc--------------
Confidence 4578877 4579999999999999999999999999999875 479999987642
Q ss_pred CCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCCCCCCceeecCCCCccc
Q 011649 198 WFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQNGASGIMGLDRGPVSI 277 (480)
Q Consensus 198 ~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~GilGLg~~~~Sl 277 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ +++.|||++...+ |...+||||||+..+++
T Consensus 56 --------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~v------~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~ 114 (340)
T 1wkr_A 56 --------S-----DKVSVTYGSGS-FSGTEYTDTVTLGSLTI------PKQSIGVASRDSG-FDGVDGILGVGPVDLTV 114 (340)
T ss_dssp --------E-----EEEEEECSSCE-EEEEEEEEEEEETTEEE------EEEEEEEEEEEES-CTTCSEEEECSCGGGGT
T ss_pred --------C-----ceEEEEECCcE-EEEEEEEEEEEECCEEE------cceEEEEEEccCC-CcCCCcEEECCcccccc
Confidence 1 79999999996 89999999999987654 8999999999766 56789999999988765
Q ss_pred e--------------eeccc------ceeEEEecCC---CCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEe
Q 011649 278 I--------------SKTNI------SYFFYCLHSP---YGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLT 333 (480)
Q Consensus 278 ~--------------sQl~~------~~FS~cL~~~---~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~ 333 (480)
. .++.. ..||+||.+. ....|.|+||++|+ ++.+++.|+|+..++....+|.|. +
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~ 193 (340)
T 1wkr_A 115 GTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-Q 193 (340)
T ss_dssp TSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-E
T ss_pred ccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-e
Confidence 2 22221 1299999864 23479999999998 789999999998865446799999 9
Q ss_pred eEEEcc-eEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEE
Q 011649 334 GISVGG-ERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKIT 412 (480)
Q Consensus 334 gIsVgg-~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 412 (480)
+|+|++ +.+..+ +++||||||++++||+++|++|.+++++.+ ....+. +..+|. ....+|+|+
T Consensus 194 ~i~v~~~~~l~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~---~~~~g~--~~~~C~-----~~~~~p~i~ 257 (340)
T 1wkr_A 194 SIRYGSSTSILSS------TAGIVDTGTTLTLIASDAFAKYKKATGAVA---DNNTGL--LRLTTA-----QYANLQSLF 257 (340)
T ss_dssp EEEETTTEEEEEE------EEEEECTTBCSEEECHHHHHHHHHHHTCEE---CTTTSS--EEECHH-----HHHTCCCEE
T ss_pred eEEECCCeEccCC------CeEEEeCCcccccCCHHHHHHHHHhhCCEE---cCCCCe--EEeecc-----ccccCCcEE
Confidence 999998 877422 359999999999999999999988887642 222221 233554 345789999
Q ss_pred EEEcCCcEEEecCCCeEEEeC-------CCeEEE-EEEeCCC---CCCeeeechhhhceeEEEEeCCCCEEEEeeCCCC
Q 011649 413 IHFLGGVDLELDVRGTLVVES-------VRQVCL-GFALLPS---DPNSILLGNVQQRGYEVHYDVAGRRLGFGPGNCN 480 (480)
Q Consensus 413 ~~f~gg~~~~l~~~~~~~~~~-------~~~~Cl-~~~~~~~---~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~C~ 480 (480)
|+|+| .++.|++++|+++.. ....|+ +|.+... ....||||++|||++|+|||++++|||||+++|+
T Consensus 258 f~f~g-~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 258 FTIGG-QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp EEETT-EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTT
T ss_pred EEECC-EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCC
Confidence 99975 999999999998753 124675 7776431 1236999999999999999999999999999984
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=7.1e-53 Score=423.92 Aligned_cols=292 Identities=21% Similarity=0.297 Sum_probs=238.7
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccccccCCCccccccccCCCCCCCCCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCIHCSQQRDPFFDPSKSKTFSKIPCNSTTCKILLEWFPPNGQDKC 207 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~~~~~~~~C 207 (480)
.+..|+++|.|| +|++.|+|||||+++||+|.+|..|..+.++.|||++|+ ++.. +
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~--------------------~- 68 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELS--------------------G- 68 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEE--------------------E-
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccC--------------------C-
Confidence 678999999999 999999999999999999999988654555899999998 5532 2
Q ss_pred CCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCCC---CCCCceeecCCCCccce------
Q 011649 208 SSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGDQ---NGASGIMGLDRGPVSII------ 278 (480)
Q Consensus 208 ~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~~---~~~~GilGLg~~~~Sl~------ 278 (480)
|.|.+.|+||+.++|.+++|+|+|++..+ +++.|||++...+.| ...+||||||+..++.+
T Consensus 69 ----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v------~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 138 (323)
T 1bxo_A 69 ----YTWSISYGDGSSASGNVFTDSVTVGGVTA------HGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQT 138 (323)
T ss_dssp ----EEEEEECTTSCEEEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCC
T ss_pred ----CeEEEEeCCCCeEEEEEEEEEEEECCEEE------CcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCC
Confidence 89999999998799999999999987664 899999999876544 46899999999877653
Q ss_pred -------eecccceeEEEecCCCCCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccC
Q 011649 279 -------SKTNISYFFYCLHSPYGSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFT 350 (480)
Q Consensus 279 -------sQl~~~~FS~cL~~~~~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 350 (480)
+|+....||+||.+. ..|.|+|||+|+ ++.+++.|+|+... ..+|.|.|++|+|++ .. ...
T Consensus 139 ~~~~~l~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~---~~~-- 207 (323)
T 1bxo_A 139 TFFDTVKSSLAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS-QS---GDG-- 207 (323)
T ss_dssp CHHHHHGGGBSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT-EE---EEE--
T ss_pred CHHHHHHHhcCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC-cc---CCC--
Confidence 233223399999864 579999999998 78999999999752 568999999999999 22 121
Q ss_pred CCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCCCcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEE
Q 011649 351 KLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGKGIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLV 430 (480)
Q Consensus 351 ~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~ 430 (480)
..+||||||++++||+++|++|.+++.++. +....+. +..+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 208 -~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g~--~~~~C~-------~~~P~i~f~fg-g~~~~l~~~~~~~ 274 (323)
T 1bxo_A 208 -FSGIADTGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAGG--YVFDCS-------TNLPDFSVSIS-GYTATVPGSLINY 274 (323)
T ss_dssp -EEEEECTTCSSEEECHHHHHHHHTTSTTCE--EETTTTE--EEECTT-------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred -ceEEEeCCCCceeCCHHHHHHHHHhCCCce--EcCcCCE--EEEECC-------CCCceEEEEEC-CEEEEECHHHeEE
Confidence 459999999999999999999999885432 2222222 233564 36899999995 5999999999998
Q ss_pred EeC-CCeEEEE-EEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEeeCC
Q 011649 431 VES-VRQVCLG-FALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGPGN 478 (480)
Q Consensus 431 ~~~-~~~~Cl~-~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~~~ 478 (480)
+.. +...|++ |.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 275 ~~~~~~~~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 275 GPSGDGSTCLGGIQSNS-GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EECSSSSCEEESEEECT-TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eccCCCCeEEEEEECCC-CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 864 3478985 76654 23579999999999999999999999999874
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6.4e-42 Score=329.66 Aligned_cols=218 Identities=22% Similarity=0.370 Sum_probs=184.4
Q ss_pred eeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCccccccCCCcccccc
Q 011649 119 TFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI---HCSQQRDPFFDPSKSKTFSKIPCNSTTCKIL 195 (480)
Q Consensus 119 ~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~---~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 195 (480)
.+|+... .+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~---------- 69 (239)
T 1b5f_A 4 VVALTND--RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH--SMYESSDSSTYKEN---------- 69 (239)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS--CCBCGGGCTTCEEE----------
T ss_pred eeeeeec--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC--CCCCCccCCCeeeC----------
Confidence 4666652 6789999999999999999999999999999999997 48865 78999999999876
Q ss_pred ccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEeecCCCcccccCCeEEEEEecCCCC-C--CCCCceeecCC
Q 011649 196 LEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQEVNGNGYFARYPFLLGCTDNNTGD-Q--NGASGIMGLDR 272 (480)
Q Consensus 196 ~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~~~~~~~~~~~~~~FGc~~~~~g~-~--~~~~GilGLg~ 272 (480)
+ |.|.+.|++|+ ++|.+++|+|+|++..+ +++.|||++...+. | ...+||||||+
T Consensus 70 ----------~-----~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~v------~~~~fg~~~~~~~~~f~~~~~~GilGLg~ 127 (239)
T 1b5f_A 70 ----------G-----TFGAIIYGTGS-ITGFFSQDSVTIGDLVV------KEQDFIEATDEADNVFLHRLFDGILGLSF 127 (239)
T ss_dssp ----------E-----EEEEEECSSCE-EEEEEEEEEEEETTEEE------EEEEEEEEEEECHHHHTTCSCCEEEECSC
T ss_pred ----------C-----cEEEEEECCCc-EEEEEEEEEEEECCcEE------ccEEEEEEEeccCccccccCcceEEecCc
Confidence 2 78999999995 89999999999987654 89999999987542 2 46899999999
Q ss_pred CCcc------ceeeccc--ceeEEEecCCC--CCceeEEeCCCCC-cCCCCcEEeeceeCCCCCeeEEEEEeeEEEcceE
Q 011649 273 GPVS------IISKTNI--SYFFYCLHSPY--GSTGYITFGKPDT-VNKKFVKYTPIVTTPEQSEFYHITLTGISVGGER 341 (480)
Q Consensus 273 ~~~S------l~sQl~~--~~FS~cL~~~~--~~~G~L~fGg~d~-~~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~ 341 (480)
..++ +++|... ..||+||++.. ...|.|+||++|+ ++.+++.|+|+.. ..+|.|.|++|+|+++.
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~ 203 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDVLIGDKS 203 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCEEETTEE
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEEEECCEE
Confidence 9887 3444332 22999998752 3579999999997 7788999999987 57999999999999998
Q ss_pred eecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHH
Q 011649 342 LPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRK 379 (480)
Q Consensus 342 l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~ 379 (480)
+.+.... .++||||||++++||+++|++|.+++++
T Consensus 204 ~~~~~~~---~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 204 TGFCAPG---CQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp CCTTTTC---EEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred ecccCCC---CEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 7654432 4699999999999999999999988754
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.1e-35 Score=286.17 Aligned_cols=212 Identities=20% Similarity=0.297 Sum_probs=169.5
Q ss_pred CCeEEEEEecCCCC-C--CCCCceeecCCCCccce------eecccc------eeEEEecCCCCC--ceeEEeCCCCC-c
Q 011649 247 YPFLLGCTDNNTGD-Q--NGASGIMGLDRGPVSII------SKTNIS------YFFYCLHSPYGS--TGYITFGKPDT-V 308 (480)
Q Consensus 247 ~~~~FGc~~~~~g~-~--~~~~GilGLg~~~~Sl~------sQl~~~------~FS~cL~~~~~~--~G~L~fGg~d~-~ 308 (480)
+++.|||++...+. | ...+||||||+..++.. .|+..+ .||+||.+.... .|.|+||++|+ +
T Consensus 6 ~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~ 85 (241)
T 1lya_B 6 ERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKY 85 (241)
T ss_dssp EEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCGGG
T ss_pred CCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcCHHH
Confidence 89999999998764 4 47899999999876532 333322 299999886433 89999999997 7
Q ss_pred CCCCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhhccCCC
Q 011649 309 NKKFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKKYKMGK 388 (480)
Q Consensus 309 ~~~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~~~~~~ 388 (480)
+.+++.|+|+.. +.+|.|.|++|+|+++.+... . ...+||||||++++||+++|++|.+++++.. . ..
T Consensus 86 ~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~-~---~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~---~-~~ 153 (241)
T 1lya_B 86 YKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCK-E---GCEAIVDTGTSLMVGPVDEVRELQKAIGAVP---L-IQ 153 (241)
T ss_dssp EEEEEEEEECSS----BTTBEEEEEEEEETTSCEEST-T---CEEEEECTTCSSEEECHHHHHHHHHHHTCEE---E-ET
T ss_pred cCCceEEEECcc----ccEEEEEEeEEEECCeeEecc-C---CCEEEEECCCccccCCHHHHHHHHHHhCCee---c-cC
Confidence 889999999986 679999999999999875322 1 1469999999999999999999999986542 1 12
Q ss_pred CcccccccceecCCCcccccceEEEEEcCCcEEEecCCCeEEEeCC--CeEEE-EEEeCCC---CCCeeeechhhhceeE
Q 011649 389 GIEDLFDTCYDLSAYKTVVVPKITIHFLGGVDLELDVRGTLVVESV--RQVCL-GFALLPS---DPNSILLGNVQQRGYE 462 (480)
Q Consensus 389 ~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~--~~~Cl-~~~~~~~---~~~~~IlG~~f~~~~~ 462 (480)
+ .+..+|+. ...+|+|+|+|+ |++++|++++|+++... ...|+ +|..... ..+.||||++|||++|
T Consensus 154 g--~~~~~C~~-----~~~~p~i~f~f~-g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y 225 (241)
T 1lya_B 154 G--EYMIPCEK-----VSTLPAITLKLG-GKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYY 225 (241)
T ss_dssp T--EEEEEGGG-----GGGSCCEEEEET-TEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEE
T ss_pred C--cEEEECCC-----CccCCeEEEEEC-CEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceE
Confidence 2 23346753 457899999996 59999999999998753 46898 6887531 2457999999999999
Q ss_pred EEEeCCCCEEEEeeCC
Q 011649 463 VHYDVAGRRLGFGPGN 478 (480)
Q Consensus 463 vvfD~~~~riGFa~~~ 478 (480)
+|||++++|||||+++
T Consensus 226 ~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 226 TVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEECCCCEEEEEEcC
Confidence 9999999999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=1.7e-22 Score=166.16 Aligned_cols=89 Identities=28% Similarity=0.498 Sum_probs=79.6
Q ss_pred eeceeecCCCCeeEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCccccccCCCccccc
Q 011649 119 TFPAKTGIVAADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCKPCI----HCSQQRDPFFDPSKSKTFSKIPCNSTTCKI 194 (480)
Q Consensus 119 ~~p~~~g~~~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C~----~C~~~~~~~fdps~SsT~~~~~C~s~~C~~ 194 (480)
.+|+... .+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|..+ +.|||++|+||+..
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~--~~y~p~~SsT~~~~--------- 70 (97)
T 1lya_A 4 PEVLKNY--MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH--HKYNSDKSSTYVKN--------- 70 (97)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS--CCBCGGGCTTCEEE---------
T ss_pred eEeeEEC--CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC--CCCCchhCCCceeC---------
Confidence 4677542 6789999999999999999999999999999999997 48765 79999999999987
Q ss_pred cccCCCCCCCCCCCCCCCcceeeecCCCcEEEEEEEEEEEEee
Q 011649 195 LLEWFPPNGQDKCSSKECPYDIAYVDGSGETGFWATDRMTIQE 237 (480)
Q Consensus 195 ~~~~~~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtltl~~ 237 (480)
+ |.|.+.|++|+ +.|.+++|+|+|++
T Consensus 71 -----------~-----~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 -----------G-----TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----------E-----EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----------C-----CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 2 79999999996 89999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.60 E-value=1.2e-15 Score=122.69 Aligned_cols=77 Identities=18% Similarity=0.324 Sum_probs=63.5
Q ss_pred CCCcccccceEEEEEcCCcEEEecCCCeEEEeCC--CeEEE-EEEeCC--CCCCeeeechhhhceeEEEEeCCCCEEEEe
Q 011649 401 SAYKTVVVPKITIHFLGGVDLELDVRGTLVVESV--RQVCL-GFALLP--SDPNSILLGNVQQRGYEVHYDVAGRRLGFG 475 (480)
Q Consensus 401 ~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~--~~~Cl-~~~~~~--~~~~~~IlG~~f~~~~~vvfD~~~~riGFa 475 (480)
+|.....+|+|+|+|+| ++++|++++|+++... ...|+ +|...+ ...+.||||++|||++|+|||.+++|||||
T Consensus 6 ~C~~~~~~P~i~f~~gg-~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA 84 (87)
T 1b5f_B 6 DCNTLSSMPNVSFTIGG-KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFA 84 (87)
T ss_dssp CGGGGGGCCCEEEEETT-EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred ECCCCCcCCcEEEEECC-EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEE
Confidence 34445679999999965 9999999999998642 46898 687653 223579999999999999999999999999
Q ss_pred eCC
Q 011649 476 PGN 478 (480)
Q Consensus 476 ~~~ 478 (480)
+++
T Consensus 85 ~~~ 87 (87)
T 1b5f_B 85 EAA 87 (87)
T ss_dssp EEC
T ss_pred EcC
Confidence 864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.19 E-value=1.4 Score=37.63 Aligned_cols=26 Identities=15% Similarity=0.143 Sum_probs=24.1
Q ss_pred eeeechhhhceeEEEEeCCCCEEEEe
Q 011649 450 SILLGNVQQRGYEVHYDVAGRRLGFG 475 (480)
Q Consensus 450 ~~IlG~~f~~~~~vvfD~~~~riGFa 475 (480)
..|||..||+.+-+..|..+++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 48999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.01 E-value=0.76 Score=39.67 Aligned_cols=108 Identities=20% Similarity=0.216 Sum_probs=61.7
Q ss_pred eEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHHHHHHHHHHhhh-cc-CCCCcccccccceecCCCc
Q 011649 327 FYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSALRSAFRKRMKK-YK-MGKGIEDLFDTCYDLSAYK 404 (480)
Q Consensus 327 ~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~l~~~~~~~~~~-~~-~~~~~~~~~~~C~~~~~~~ 404 (480)
.++|+ +.|+|+.+. +++|||.+.+.++.+..+.+-- ...... +. .+.+. +. ..+
T Consensus 24 ~l~v~---~~Ing~~v~----------~LVDTGAs~s~Is~~~A~rlGL--~~~~~~~~~~~a~g~-G~-~~~------- 79 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK----------AFVDSGAQMTIMSQACAERCNI--MRLVDRRWAGVAKGV-GT-QRI------- 79 (148)
T ss_dssp CCEEE---EEETTEEEE----------EEECTTCSSCEEEHHHHHHTTC--GGGEEGGGCEECCC-----CEE-------
T ss_pred EEEEE---EEECCEEEE----------EEEeCCCCcEeeCHHHHHHcCC--ccccCcceeEEEEcC-Cc-cEE-------
Confidence 35555 457888764 9999999999999998887621 000000 00 00000 00 000
Q ss_pred ccccceEEEEEcCCcEEEecCCCeEEEeCCCeEEE-EEEeCCCCCCeeeechhhhceeEEEEeCCCCEEEEee
Q 011649 405 TVVVPKITIHFLGGVDLELDVRGTLVVESVRQVCL-GFALLPSDPNSILLGNVQQRGYEVHYDVAGRRLGFGP 476 (480)
Q Consensus 405 ~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~Cl-~~~~~~~~~~~~IlG~~f~~~~~vvfD~~~~riGFa~ 476 (480)
...++...+.+++ ..+ .|- .+.+.. . -..|||.-+|+.+-.+.|+++++|-|..
T Consensus 80 ~g~v~~~~I~Ig~-~~~---------------~~~~~Vle~~-~-~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 80 IGRVHLAQIQIEG-DFL---------------QCSFSILEDQ-P-MDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp EEEEEEEEEEETT-EEE---------------EEEEEEETTC-S-SSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred EEEEEEEEEEECC-EEE---------------EEEEEEeCCC-C-cCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 1123334455533 321 132 222221 1 2489999999999999999999998864
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=80.67 E-value=1.5 Score=35.37 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=23.1
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEe
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQ 159 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~ 159 (480)
++.|.|| +|.+.+++|||.|.+-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5789999 899999999999999987
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=80.39 E-value=1.9 Score=34.40 Aligned_cols=28 Identities=32% Similarity=0.386 Sum_probs=24.5
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQCKP 162 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~ 162 (480)
+++|.|| +|.+.+++|||.|++-+.-..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5789999 899999999999999997553
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=75.69 E-value=3.2 Score=33.09 Aligned_cols=28 Identities=29% Similarity=0.253 Sum_probs=24.3
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQCKP 162 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~ 162 (480)
++.|.|| +|.+.+++|||.|++-+.-..
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 5779999 899999999999999996543
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=72.62 E-value=3.1 Score=35.34 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=27.1
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQC 160 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c 160 (480)
..+.+++++.|+ ++++.+++|||++.+-+.-
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 557789999998 7899999999999988853
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=71.78 E-value=3.4 Score=33.70 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=25.2
Q ss_pred EEEEEec---CCCceEEEEEEcCCCceeEeCCCC
Q 011649 133 YIVVAIG---KPKQYVSLLLDTGSGITWTQCKPC 163 (480)
Q Consensus 133 ~~~i~iG---TP~q~~~vi~DTGS~~~Wv~c~~C 163 (480)
.++|.|| +|+|.+..++|||-|++-+.-..+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 3555555 889999999999999999986654
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=68.56 E-value=4.3 Score=33.36 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=22.5
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCC
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQCK 161 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~ 161 (480)
++ |.|| +|.+.+++|||.|++-+.-.
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 45 8898 89999999999999988743
No 46
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=63.87 E-value=11 Score=29.54 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=26.6
Q ss_pred eeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 316 TPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 316 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
.||.... +..|+++ |.||. |+..|. ++||||+..+++|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYM--DAQYYGE---IGIGT-----PPQCFT---VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred EeeEECC--CCeEEEE---EEECC-----CCeEEE---EEEeCCCCceEEeEc
Confidence 5665422 4567775 77873 222233 999999999999865
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=62.53 E-value=7.3 Score=31.80 Aligned_cols=29 Identities=14% Similarity=0.266 Sum_probs=24.8
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCCC
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQCKPC 163 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~C 163 (480)
.+.|.|| +|.+..++|||-|++-+.-...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5778888 8999999999999999976543
No 48
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=57.97 E-value=8.2 Score=33.00 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=27.0
Q ss_pred CCeeEEEEEEecCCCceEEEEEEcCCCceeEeCC
Q 011649 128 AADEYYIVVAIGKPKQYVSLLLDTGSGITWTQCK 161 (480)
Q Consensus 128 ~~~~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~ 161 (480)
....|++++.|. ++++.+++|||+..+.+.-.
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 446789999998 89999999999999988644
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=47.11 E-value=21 Score=29.87 Aligned_cols=30 Identities=33% Similarity=0.449 Sum_probs=25.1
Q ss_pred eEEEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 011649 131 EYYIVVAIGKPKQYVSLLLDTGSGITWTQCKP 162 (480)
Q Consensus 131 ~Y~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~~ 162 (480)
.-++.+.|+ +|.+.+++|||.+.+-+.-..
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 346788998 899999999999999987543
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=45.99 E-value=19 Score=29.80 Aligned_cols=23 Identities=30% Similarity=0.446 Sum_probs=19.3
Q ss_pred ecCCCceEEEEEEcCCCceeEeCCC
Q 011649 138 IGKPKQYVSLLLDTGSGITWTQCKP 162 (480)
Q Consensus 138 iGTP~q~~~vi~DTGS~~~Wv~c~~ 162 (480)
|| +|.+.+++|||-|++-+.-..
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 678899999999999998654
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=45.26 E-value=19 Score=34.60 Aligned_cols=41 Identities=22% Similarity=0.335 Sum_probs=28.5
Q ss_pred CcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHH
Q 011649 312 FVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPV 369 (480)
Q Consensus 312 ~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~ 369 (480)
.+..+|+.. ...|.++ |+||.+++. ++||||++.+++|..-
T Consensus 5 ~v~~~~~~~----~~~Y~~~---i~iG~Q~~~----------v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 5 VATNTPTAN----DEEYITP---VTIGGTTLN----------LNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEECGG----GSCEEEE---EEETTEEEE----------EEEETTCCCEEECBTT
T ss_pred ceeeeecCC----CCEEEEE---EEECCEEEE----------EEEeCCCcceEEecCC
Confidence 344455543 5567765 778855442 9999999999999754
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=44.60 E-value=18 Score=32.71 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=23.4
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeC
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQC 160 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~c 160 (480)
.+.|.|| +|.+.+++|||.|.+-+.-
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 6789999 8999999999999998874
No 53
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=41.80 E-value=34 Score=33.30 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=31.0
Q ss_pred CCCcEEeeceeCCCCCeeEEEEEeeEEEc--ceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 310 KKFVKYTPIVTTPEQSEFYHITLTGISVG--GERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 310 ~~~~~~tpl~~~~~~~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
.+.+...|+.... ...|.++ |.|| .+.+ . ++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~--~~~Y~~~---i~iGtP~q~~-------~---v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFD--LEEYAIP---VSIGTPGQDF-------Y---LLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETT--TTEEEEE---EEETTTTEEE-------E---EEEETTCCCCEEEBT
T ss_pred CCccceEEeecCC--CCEEEEE---EEECCCCcEE-------E---EEEcCCCCCeEECCC
Confidence 3566678887632 4567765 7788 4443 2 999999999999865
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=41.10 E-value=23 Score=33.97 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=27.8
Q ss_pred cEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHH
Q 011649 313 VKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPV 369 (480)
Q Consensus 313 ~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~ 369 (480)
+..+|+.. ...|.++ |.||.+++. ++||||++.+++|..-
T Consensus 6 v~~~~~~~----~~~Y~~~---i~iG~q~~~----------v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 6 VTTNPTSN----DEEYITQ---VTVGDDTLG----------LDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEECGG----GCCEEEE---EEETTEEEE----------EEEETTCCCEEECBTT
T ss_pred eeeeEcCC----CCEEEEE---EEECCEEEE----------EEEcCCCcceEEecCC
Confidence 44455533 5567765 778855442 9999999999999754
No 55
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=39.69 E-value=23 Score=34.09 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=24.3
Q ss_pred CeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHHH
Q 011649 325 SEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPV 369 (480)
Q Consensus 325 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~ 369 (480)
...|.++ |.||.+++. ++||||++.+++|..-
T Consensus 13 ~~~Y~~~---i~iG~Q~~~----------v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTLH----------LDFDTGSADLWVFSDE 44 (325)
T ss_dssp TSCEEEE---EEEBTEEEE----------EEEETTCCCEEEECTT
T ss_pred CCEEEEE---EEECCEEEE----------EEEeCCCccceEeeCC
Confidence 5567765 778855442 9999999999998754
No 56
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=38.72 E-value=39 Score=32.29 Aligned_cols=44 Identities=23% Similarity=0.234 Sum_probs=29.2
Q ss_pred CcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 312 FVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 312 ~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
++...||.... +..|.++ |.||. |+..+. ++||||++.+++|..
T Consensus 2 ~~~~~~l~n~~--~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYL--DSQYFGK---IYLGT-----PPQEFT---VLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred CcceeeeEecc--CCEEEEE---EEECC-----CCeEEE---EEEeCCccceEEcCC
Confidence 34556776522 4567765 77874 222233 999999999999865
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=33.06 E-value=45 Score=30.36 Aligned_cols=40 Identities=20% Similarity=0.367 Sum_probs=26.3
Q ss_pred eeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 316 TPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 316 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
.||.... +..|+++ |.||. |+..|. ++||||++.+++|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 5 VALTNDR--DTSYFGE---IGIGT-----PPQKFT---VIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred eeeeecC--CCEEEEE---EEECC-----CCeEEE---EEEeCCCcceEEEcC
Confidence 5555422 4567665 77873 222233 999999999999864
No 58
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=29.27 E-value=60 Score=32.08 Aligned_cols=42 Identities=5% Similarity=-0.050 Sum_probs=28.3
Q ss_pred EeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 315 YTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 315 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
..||..+. ....|+++ |.||. |+..|. ++||||+..+|+|-.
T Consensus 11 ~~pl~~~~-~~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDG-STGLHWAN---LQKRT-----PLMQVP---VLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECT-TTCCEEEE---EEETT-----TTEEEE---EEEETTCSSEEEECS
T ss_pred EEeeecCC-CCceEEEE---EECCC-----CCceeE---EEEECCCCceeECCC
Confidence 47777433 25567775 67773 233333 999999999999854
No 59
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.46 E-value=48 Score=31.78 Aligned_cols=31 Identities=16% Similarity=0.340 Sum_probs=23.4
Q ss_pred CeeEEEEEeeEEEc--ceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 325 SEFYHITLTGISVG--GERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 325 ~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
...|.++ |.|| .+++ . ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGTP~Q~~-------~---v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 14 DDAYITP---VQIGTPAQTL-------N---LDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCCEEEE---EEETTTTEEE-------E---EEEETTCCCEEECBT
T ss_pred CCEEEEE---EEECCCCeEE-------E---EEECCCCCCeEEecC
Confidence 5567664 7788 4443 2 999999999999874
No 60
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=26.79 E-value=69 Score=30.68 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=26.0
Q ss_pred EeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccH
Q 011649 315 YTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPA 367 (480)
Q Consensus 315 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~ 367 (480)
..||... ...|.++ |.||. |+..+. ++||||++.+++|.
T Consensus 4 ~~~l~n~---~~~Y~~~---i~iGT-----P~q~~~---v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVN---VGVGS-----PATTYS---LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEC---SSCEEEE---EEETT-----TTEEEE---EEEETTCCCCEECS
T ss_pred cEeeecc---CcEEEEE---EEECC-----CCcEEE---EEEeCCChhheecC
Confidence 3566552 3467765 77873 222233 99999999999985
No 61
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=26.35 E-value=80 Score=29.98 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=26.6
Q ss_pred eeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 316 TPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 316 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
.||... .+..|.++ |.||. |+..+. ++||||++.+++|..
T Consensus 4 ~~l~n~--~~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 4 EQMKNE--ADTEYYGV---ISIGT-----PPESFK---VIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEEE--TTTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEECBT
T ss_pred eeeecC--CCCEEEEE---EEECC-----CCeEEE---EEEeCCCcceEEecC
Confidence 556542 24567765 67774 222233 999999999999965
No 62
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=26.29 E-value=60 Score=30.98 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=23.3
Q ss_pred CeeEEEEEeeEEEc--ceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 325 SEFYHITLTGISVG--GERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 325 ~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
...|.++ |.|| .+++ . ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGTP~q~~-------~---v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 14 DIEYYGQ---VTIGTPGKKF-------N---LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTEEEEE---EEETTTTEEE-------E---EEEETTCCCCEEEBT
T ss_pred CCEEEEE---EEECCCCeEE-------E---EEEcCCCCCEEEccC
Confidence 5567665 7788 4443 2 999999999999864
No 63
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=25.96 E-value=82 Score=30.08 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=29.6
Q ss_pred CcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 312 FVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 312 ~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
+....||.... +..|+++ |.||. |+..+. ++||||++.+++|..
T Consensus 6 ~~~~~~l~n~~--d~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 49 (341)
T 3k1w_A 6 TTSSVILTNYM--DTQYYGE---IGIGT-----PPQTFK---VVFDTGSSNVWVPSS 49 (341)
T ss_dssp BCEEEEEEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred CCccccceEcc--CCEEEEE---EEEcC-----CCcEEE---EEEeCCCcceEEccC
Confidence 34567776632 4567765 77874 222233 999999999999864
No 64
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=25.72 E-value=54 Score=31.41 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=23.8
Q ss_pred CeeEEEEEeeEEEc--ceEeecCccccCCCCEEEecCCcceeccHHH
Q 011649 325 SEFYHITLTGISVG--GERLPLKASYFTKLSTEIDSGTIITRFPAPV 369 (480)
Q Consensus 325 ~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~ 369 (480)
...|.++ |.|| .+++ . ++||||++.+++|..-
T Consensus 14 ~~~Y~~~---i~iGTP~Q~~-------~---v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 14 DSEYITS---VSIGTPAQVL-------P---LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp CCCEEEE---EEETTTTEEE-------E---EEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCCCeEE-------E---EEEcCCCCCeEEecCC
Confidence 4567664 7788 4443 3 9999999999999753
No 65
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=25.48 E-value=56 Score=29.39 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=23.6
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCC
Q 011649 133 YIVVAIGKPKQYVSLLLDTGSGITWTQCK 161 (480)
Q Consensus 133 ~~~i~iGTP~q~~~vi~DTGS~~~Wv~c~ 161 (480)
.+++.|| +|.+..++|||.|.+-+.-.
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cEEEEEC--CEEEeeeecccCCceeeecc
Confidence 5789999 79999999999999998643
No 66
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=25.48 E-value=85 Score=30.00 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=26.0
Q ss_pred eeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 316 TPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 316 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
.|+... ...|.++ |.||. |+..|. ++||||++.+++|..
T Consensus 5 ~~l~~~---~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINE---GPSYAAD---IVVGS-----NQQKQT---VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEEC---SSSEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEEE
T ss_pred EEEecC---CcEEEEE---EEEcC-----CCcEEE---EEEcCCCCCEEEecC
Confidence 456542 4567775 77873 222233 999999999999843
No 67
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=25.23 E-value=86 Score=29.93 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=26.6
Q ss_pred EeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 315 YTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 315 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
-+|+... ..+|.++ |.||. |+..+. ++||||++.+++|..
T Consensus 4 ~~~l~~~---~~~Y~~~---i~iGt-----P~Q~~~---v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 4 SLSLINE---GPSYASK---VSVGS-----NKQQQT---VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEEC---SSSEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEEE
T ss_pred eeEEEcC---CCEEEEE---EEEcC-----CCcEEE---EEEeCCCCceEEecC
Confidence 3566552 4567776 67773 222233 999999999999843
No 68
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=25.15 E-value=93 Score=29.78 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=26.1
Q ss_pred EeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 315 YTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 315 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
-.|+.. ....|.++ |.||. |+..|. ++||||++.+++|..
T Consensus 4 ~~~l~~---~~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 4 AVTLHN---EAITYTAD---ITVGS-----DNQKLN---VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEEE---CSSCEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEEE
T ss_pred eEEEec---CCeEEEEE---EEECC-----CCcEEE---EEEeCCCCCeEEecC
Confidence 345554 24567775 77872 222233 999999999999843
No 69
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=24.36 E-value=87 Score=29.80 Aligned_cols=41 Identities=20% Similarity=0.330 Sum_probs=26.7
Q ss_pred EeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 315 YTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 315 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
..|+.... +..|.++ |.||. |+..+. ++||||++.+++|..
T Consensus 4 ~~~l~~~~--~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 4 DVPLTNYL--NAQYYTD---ITLGT-----PPQNFK---VILDTGSSNLWVPSN 44 (329)
T ss_dssp EEECEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred ceeeeecC--CCEEEEE---EEECC-----CCcEEE---EEEeCCCcCeEEecC
Confidence 35665422 3457665 77873 222233 999999999999865
No 70
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=23.53 E-value=70 Score=31.88 Aligned_cols=45 Identities=13% Similarity=0.030 Sum_probs=31.8
Q ss_pred CCcEEeeceeCCCCCeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccH
Q 011649 311 KFVKYTPIVTTPEQSEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPA 367 (480)
Q Consensus 311 ~~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~ 367 (480)
..-...|+..+.. ...|+++ |+||. |+..|. ++||||+.++|+|-
T Consensus 6 ~~~~~~pv~~d~~-~~~Y~~~---i~iGT-----Ppq~~~---v~~DTGS~~lWv~c 50 (413)
T 3vla_A 6 PSALVVPVKKDAS-TLQYVTT---INQRT-----PLVSEN---LVVDLGGRFLWVDC 50 (413)
T ss_dssp CSEEEEEEEECTT-TCCEEEE---EEETT-----TTEEEE---EEEETTCSSEEEEC
T ss_pred CccEEEEeeecCC-CCeEEEE---EEcCC-----CCcceE---EEEeCCChhhhccc
Confidence 3445688888653 5567766 66775 334444 99999999999985
No 71
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=22.03 E-value=93 Score=29.66 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.2
Q ss_pred CeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 325 SEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 325 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
..+|.++ |.||. |+..+. ++||||++.+++|..
T Consensus 11 ~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 11 QVTYAAD---ITVGS-----NNQKLN---VIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSSEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEEE
T ss_pred CcEEEEE---EEEcC-----CCcEEE---EEEECCCcceEEEcC
Confidence 4567776 67773 222233 999999999999854
No 72
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=21.86 E-value=88 Score=24.80 Aligned_cols=31 Identities=16% Similarity=0.228 Sum_probs=24.3
Q ss_pred EeeEEEcceEeecCccccCCCCEEEecCCcceeccHHHHHH
Q 011649 332 LTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAPVYSA 372 (480)
Q Consensus 332 l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~~y~~ 372 (480)
+..|.|+|+... +++|||.-.|.|.......
T Consensus 10 ~v~v~I~Gq~~e----------~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 10 TTIVLINDTPLN----------VLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp EEEEEETTEEEE----------EEECTTCSSCEEEHHHHHH
T ss_pred EEEEEECCEEEE----------EEeccCCCcEEEccccCcc
Confidence 345889998653 9999999999998766543
No 73
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=21.33 E-value=73 Score=26.52 Aligned_cols=24 Identities=21% Similarity=0.416 Sum_probs=20.2
Q ss_pred eEEEcceEeecCccccCCCCEEEecCCcceeccH
Q 011649 334 GISVGGERLPLKASYFTKLSTEIDSGTIITRFPA 367 (480)
Q Consensus 334 gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~ 367 (480)
.+.|+|+.+. +++|||...+.|.+
T Consensus 26 ~i~I~G~~~~----------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 26 TLKVGGQPVT----------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEETTEEEE----------EEECTTCSSCEECS
T ss_pred EEEECCEEEE----------EEEeCCCCeEEEcc
Confidence 3888998764 89999999999975
No 74
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=21.24 E-value=71 Score=30.25 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=23.6
Q ss_pred CeeEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccHH
Q 011649 325 SEFYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPAP 368 (480)
Q Consensus 325 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~~ 368 (480)
+..|+++ |.||. |+..+. ++||||++.+++|..
T Consensus 10 d~~Y~~~---i~iGt-----P~Q~~~---v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 10 DSQYFGK---IYIGT-----PPQEFT---VVFDTGSSDLWVPSI 42 (320)
T ss_dssp CCCCEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEEeCCCCceEEcCC
Confidence 4567776 67773 233333 999999999999864
No 75
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=20.73 E-value=83 Score=25.55 Aligned_cols=30 Identities=23% Similarity=0.180 Sum_probs=23.7
Q ss_pred eEEEEEeeEEEcceEeecCccccCCCCEEEecCCcceeccH
Q 011649 327 FYHITLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPA 367 (480)
Q Consensus 327 ~y~v~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~ 367 (480)
.|.=.+. |.|+|+.+. +++|||.-.|.|.+
T Consensus 11 l~~rP~v-ikI~Gq~~e----------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK----------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE----------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE----------EEecCCCCcEEEcc
Confidence 3444566 999998764 99999999998864
No 76
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=20.21 E-value=89 Score=24.59 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=21.5
Q ss_pred EEeeEEEcceEeecCccccCCCCEEEecCCcceeccH
Q 011649 331 TLTGISVGGERLPLKASYFTKLSTEIDSGTIITRFPA 367 (480)
Q Consensus 331 ~l~gIsVgg~~l~i~~~~~~~~~~iiDSGT~~t~Lp~ 367 (480)
.+..|.|+|+... +++|||.-.|.|.+
T Consensus 9 P~vtvkI~Gq~~e----------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 9 PLVTIKIGGQLKE----------ALLDTGADDTIIEE 35 (99)
T ss_dssp CEEEEEETTEEEE----------EEECTTCSSEEESC
T ss_pred CEEEEEECCEEEE----------EEeccCCCcEEEec
Confidence 3455889998764 99999999998864
Done!