Query 011650
Match_columns 480
No_of_seqs 338 out of 3128
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:31:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtf_A UDP-glucose 6-dehydroge 100.0 4.9E-95 1.7E-99 747.9 48.4 419 1-468 21-444 (444)
2 4a7p_A UDP-glucose dehydrogena 100.0 1.6E-92 5.3E-97 735.9 48.1 432 2-469 9-444 (446)
3 3gg2_A Sugar dehydrogenase, UD 100.0 1.7E-88 5.7E-93 709.1 50.1 432 2-470 3-440 (450)
4 3g79_A NDP-N-acetyl-D-galactos 100.0 3E-88 1E-92 707.4 46.3 430 1-469 18-472 (478)
5 3ojo_A CAP5O; rossmann fold, c 100.0 6E-88 2E-92 696.6 42.8 410 2-469 12-426 (431)
6 2o3j_A UDP-glucose 6-dehydroge 100.0 9.4E-86 3.2E-90 695.0 54.1 460 1-471 9-471 (481)
7 2y0c_A BCEC, UDP-glucose dehyd 100.0 2.5E-83 8.6E-88 674.8 51.0 451 2-473 9-465 (478)
8 2q3e_A UDP-glucose 6-dehydroge 100.0 1E-82 3.4E-87 670.6 54.1 459 1-468 5-466 (467)
9 3pid_A UDP-glucose 6-dehydroge 100.0 1E-76 3.6E-81 611.6 36.8 387 1-453 36-424 (432)
10 1mv8_A GMD, GDP-mannose 6-dehy 100.0 1.3E-75 4.4E-80 611.8 42.1 423 2-467 1-436 (436)
11 1dlj_A UDP-glucose dehydrogena 100.0 5.5E-70 1.9E-74 563.0 38.8 396 2-452 1-401 (402)
12 3qha_A Putative oxidoreductase 100.0 2.4E-31 8.3E-36 263.5 23.7 249 2-301 16-281 (296)
13 3obb_A Probable 3-hydroxyisobu 100.0 2.9E-31 1E-35 262.8 24.2 250 1-300 3-271 (300)
14 4dll_A 2-hydroxy-3-oxopropiona 100.0 4.4E-31 1.5E-35 264.5 25.1 250 1-301 31-291 (320)
15 3doj_A AT3G25530, dehydrogenas 100.0 3.4E-31 1.2E-35 264.2 23.0 251 1-301 21-283 (310)
16 4gbj_A 6-phosphogluconate dehy 100.0 1.1E-30 3.8E-35 258.6 23.1 249 3-301 7-267 (297)
17 3pef_A 6-phosphogluconate dehy 100.0 4.2E-30 1.4E-34 253.4 23.7 252 1-302 1-264 (287)
18 3pdu_A 3-hydroxyisobutyrate de 100.0 3.6E-30 1.2E-34 253.9 21.3 251 1-301 1-263 (287)
19 3g0o_A 3-hydroxyisobutyrate de 100.0 9.2E-30 3.2E-34 252.9 23.5 251 2-301 8-271 (303)
20 2h78_A Hibadh, 3-hydroxyisobut 100.0 3E-29 1E-33 249.0 23.9 251 1-301 3-272 (302)
21 4ezb_A Uncharacterized conserv 100.0 1.2E-27 4.1E-32 239.1 20.9 242 1-302 24-283 (317)
22 3qsg_A NAD-binding phosphogluc 100.0 3.9E-27 1.3E-31 235.0 21.5 248 1-304 24-283 (312)
23 3l6d_A Putative oxidoreductase 99.9 1.3E-25 4.3E-30 223.4 20.7 246 1-301 9-271 (306)
24 4e21_A 6-phosphogluconate dehy 99.9 8.5E-25 2.9E-29 221.4 25.6 246 2-300 23-327 (358)
25 1vpd_A Tartronate semialdehyde 99.9 1.7E-24 5.8E-29 214.1 25.5 250 2-301 6-267 (299)
26 1yb4_A Tartronic semialdehyde 99.9 1.2E-24 4E-29 214.8 20.7 252 1-303 3-266 (295)
27 2gf2_A Hibadh, 3-hydroxyisobut 99.9 9.4E-24 3.2E-28 208.5 22.9 250 2-301 1-269 (296)
28 3cky_A 2-hydroxymethyl glutara 99.9 1E-22 3.6E-27 201.5 28.7 252 1-302 4-268 (301)
29 4gwg_A 6-phosphogluconate dehy 99.9 2.2E-23 7.6E-28 217.9 20.1 207 1-251 4-221 (484)
30 2uyy_A N-PAC protein; long-cha 99.9 7.4E-23 2.5E-27 204.2 22.4 250 2-301 31-292 (316)
31 3k96_A Glycerol-3-phosphate de 99.9 3.5E-23 1.2E-27 209.6 20.1 280 1-315 29-349 (356)
32 2cvz_A Dehydrogenase, 3-hydrox 99.9 9.8E-23 3.3E-27 200.3 21.0 249 1-302 1-259 (289)
33 2p4q_A 6-phosphogluconate dehy 99.9 1E-21 3.5E-26 207.0 21.2 252 2-299 11-290 (497)
34 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 4.8E-20 1.6E-24 193.8 25.8 255 2-299 2-285 (478)
35 1txg_A Glycerol-3-phosphate de 99.9 2E-20 6.9E-25 187.6 22.0 275 2-314 1-331 (335)
36 2pgd_A 6-phosphogluconate dehy 99.9 1.6E-20 5.6E-25 197.7 22.3 249 2-297 3-281 (482)
37 1yj8_A Glycerol-3-phosphate de 99.9 6.1E-21 2.1E-25 194.9 17.6 268 1-303 21-352 (375)
38 1i36_A Conserved hypothetical 99.9 1E-20 3.5E-25 183.6 18.0 232 2-301 1-244 (264)
39 2zyd_A 6-phosphogluconate dehy 99.9 1.5E-20 5.2E-25 197.5 20.6 251 2-299 16-295 (480)
40 1evy_A Glycerol-3-phosphate de 99.8 3.6E-21 1.2E-25 195.9 13.4 279 3-316 17-344 (366)
41 2iz1_A 6-phosphogluconate dehy 99.8 8E-20 2.7E-24 192.0 23.4 249 2-299 6-287 (474)
42 1x0v_A GPD-C, GPDH-C, glycerol 99.8 2.8E-20 9.6E-25 188.3 17.0 267 2-303 9-334 (354)
43 2ew2_A 2-dehydropantoate 2-red 99.8 1.8E-19 6.3E-24 178.7 21.4 267 1-300 3-303 (316)
44 1z82_A Glycerol-3-phosphate de 99.8 1E-19 3.5E-24 183.0 16.2 257 2-303 15-310 (335)
45 2dpo_A L-gulonate 3-dehydrogen 99.8 1.2E-17 4E-22 166.4 18.4 207 1-255 6-228 (319)
46 3dtt_A NADP oxidoreductase; st 99.8 4.6E-18 1.6E-22 163.4 13.9 198 1-229 19-234 (245)
47 1zej_A HBD-9, 3-hydroxyacyl-CO 99.7 2E-17 7E-22 162.4 16.3 192 2-254 13-207 (293)
48 2g5c_A Prephenate dehydrogenas 99.7 2.3E-16 8E-21 154.3 22.4 196 1-235 1-200 (281)
49 3mog_A Probable 3-hydroxybutyr 99.7 3.1E-17 1.1E-21 172.1 16.6 210 2-254 6-223 (483)
50 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 1E-16 3.5E-21 158.7 19.3 208 1-254 15-239 (302)
51 3k6j_A Protein F01G10.3, confi 99.7 8.9E-17 3E-21 166.6 18.2 202 1-252 54-267 (460)
52 3ggo_A Prephenate dehydrogenas 99.7 6.7E-16 2.3E-20 153.7 23.1 194 1-233 33-230 (314)
53 2qyt_A 2-dehydropantoate 2-red 99.7 1.4E-16 4.8E-21 158.2 17.1 267 1-299 8-307 (317)
54 1ks9_A KPA reductase;, 2-dehyd 99.7 2.9E-17 1E-21 160.9 12.0 254 2-299 1-281 (291)
55 4e12_A Diketoreductase; oxidor 99.7 1.3E-15 4.3E-20 149.5 21.6 206 2-254 5-225 (283)
56 1bg6_A N-(1-D-carboxylethyl)-L 99.7 2.9E-16 1E-20 158.7 16.7 294 2-343 5-356 (359)
57 3ado_A Lambda-crystallin; L-gu 99.7 3.5E-16 1.2E-20 155.0 16.1 206 2-255 7-228 (319)
58 2wtb_A MFP2, fatty acid multif 99.7 6.5E-16 2.2E-20 169.7 18.0 207 1-251 312-526 (725)
59 1wdk_A Fatty oxidation complex 99.7 4.8E-16 1.7E-20 170.6 16.7 203 1-251 314-528 (715)
60 3ghy_A Ketopantoate reductase 99.7 1.9E-15 6.3E-20 151.9 17.9 261 1-297 3-311 (335)
61 1zcj_A Peroxisomal bifunctiona 99.7 1.4E-15 4.6E-20 159.3 17.2 205 1-252 37-250 (463)
62 3d1l_A Putative NADP oxidoredu 99.6 3.1E-15 1.1E-19 145.1 17.4 197 2-253 11-212 (266)
63 3b1f_A Putative prephenate deh 99.6 9.5E-15 3.3E-19 143.5 21.1 173 1-211 6-183 (290)
64 2f1k_A Prephenate dehydrogenas 99.6 1E-14 3.6E-19 142.3 21.0 190 2-231 1-190 (279)
65 4fgw_A Glycerol-3-phosphate de 99.6 2.2E-15 7.7E-20 152.8 16.2 217 2-247 35-293 (391)
66 3gt0_A Pyrroline-5-carboxylate 99.6 2E-14 6.8E-19 138.0 20.8 198 1-254 2-207 (247)
67 2izz_A Pyrroline-5-carboxylate 99.6 2.5E-14 8.7E-19 142.8 20.4 197 1-253 22-230 (322)
68 3hwr_A 2-dehydropantoate 2-red 99.6 2.4E-14 8.2E-19 142.7 19.6 252 1-297 19-302 (318)
69 3c24_A Putative oxidoreductase 99.6 6.8E-15 2.3E-19 144.4 14.2 204 1-253 11-230 (286)
70 3hn2_A 2-dehydropantoate 2-red 99.6 1.5E-13 5.3E-18 136.4 23.0 259 2-297 3-293 (312)
71 3i83_A 2-dehydropantoate 2-red 99.6 1.2E-13 4E-18 137.8 20.5 254 2-297 3-292 (320)
72 3ktd_A Prephenate dehydrogenas 99.6 1.4E-13 4.6E-18 138.1 20.0 185 1-230 8-209 (341)
73 2pv7_A T-protein [includes: ch 99.6 8.8E-14 3E-18 137.3 17.7 224 1-318 21-248 (298)
74 3tri_A Pyrroline-5-carboxylate 99.5 3.4E-13 1.2E-17 131.9 20.9 194 1-252 3-207 (280)
75 2ahr_A Putative pyrroline carb 99.5 1.4E-13 4.6E-18 132.9 16.3 194 1-253 3-199 (259)
76 1jay_A Coenzyme F420H2:NADP+ o 99.5 1.7E-13 5.8E-18 128.1 15.2 186 2-227 1-200 (212)
77 2rcy_A Pyrroline carboxylate r 99.5 5.9E-13 2E-17 128.5 17.3 188 1-252 4-199 (262)
78 1yqg_A Pyrroline-5-carboxylate 99.5 2.9E-13 9.9E-18 130.8 14.7 190 2-252 1-197 (263)
79 3zwc_A Peroxisomal bifunctiona 99.5 7E-13 2.4E-17 145.1 17.6 204 1-252 316-529 (742)
80 3c7a_A Octopine dehydrogenase; 99.5 3.2E-12 1.1E-16 131.5 20.6 218 1-244 2-269 (404)
81 2raf_A Putative dinucleotide-b 99.4 1.2E-12 3.9E-17 122.6 13.8 155 1-222 19-190 (209)
82 3g17_A Similar to 2-dehydropan 99.4 2.9E-12 1E-16 126.1 13.6 192 2-243 3-216 (294)
83 4huj_A Uncharacterized protein 99.4 1.3E-12 4.3E-17 123.2 9.1 166 1-214 23-204 (220)
84 2vns_A Metalloreductase steap3 99.3 3.8E-11 1.3E-15 112.7 13.9 170 1-218 28-204 (215)
85 1np3_A Ketol-acid reductoisome 99.3 2.7E-11 9.3E-16 121.6 13.2 196 1-247 16-223 (338)
86 2gcg_A Glyoxylate reductase/hy 99.2 4.1E-11 1.4E-15 119.8 13.0 134 2-176 156-292 (330)
87 2i76_A Hypothetical protein; N 99.2 1.6E-11 5.5E-16 119.7 7.1 183 1-245 2-190 (276)
88 3ego_A Probable 2-dehydropanto 99.2 6E-11 2E-15 117.5 10.6 201 1-240 2-226 (307)
89 2dbq_A Glyoxylate reductase; D 99.2 8.4E-11 2.9E-15 117.8 11.2 132 2-176 151-285 (334)
90 3dfu_A Uncharacterized protein 99.1 1.7E-09 5.8E-14 102.0 17.0 156 1-239 6-162 (232)
91 1guz_A Malate dehydrogenase; o 99.1 2.2E-10 7.6E-15 113.5 11.0 122 2-137 1-127 (310)
92 2w2k_A D-mandelate dehydrogena 99.1 1.5E-10 5.2E-15 116.4 9.9 109 2-144 164-273 (348)
93 2yjz_A Metalloreductase steap4 98.7 7.7E-12 2.6E-16 116.2 0.0 166 2-218 20-192 (201)
94 1pzg_A LDH, lactate dehydrogen 99.1 1.5E-09 5E-14 108.5 14.8 121 2-137 10-141 (331)
95 3ba1_A HPPR, hydroxyphenylpyru 99.0 9.8E-10 3.3E-14 109.7 11.0 130 2-177 165-297 (333)
96 3gg9_A D-3-phosphoglycerate de 99.0 2.1E-09 7.2E-14 108.0 13.2 109 2-145 161-269 (352)
97 2d0i_A Dehydrogenase; structur 99.0 1.4E-09 4.8E-14 108.7 11.4 132 2-177 147-282 (333)
98 1t2d_A LDH-P, L-lactate dehydr 99.0 2.8E-09 9.7E-14 106.0 13.4 122 2-136 5-134 (322)
99 3gvx_A Glycerate dehydrogenase 99.0 1E-09 3.5E-14 107.3 9.7 105 2-145 123-227 (290)
100 2hjr_A Malate dehydrogenase; m 99.0 5.2E-09 1.8E-13 104.4 15.0 117 2-135 15-138 (328)
101 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 4.6E-09 1.6E-13 103.9 13.1 118 1-136 1-130 (309)
102 1gdh_A D-glycerate dehydrogena 98.9 4.1E-09 1.4E-13 104.7 12.4 108 2-144 147-255 (320)
103 1ur5_A Malate dehydrogenase; o 98.9 5.3E-09 1.8E-13 103.5 12.9 120 1-137 2-128 (309)
104 1wwk_A Phosphoglycerate dehydr 98.9 7.9E-09 2.7E-13 102.1 13.6 107 2-144 143-249 (307)
105 3evt_A Phosphoglycerate dehydr 98.9 1.2E-09 4.2E-14 108.5 7.7 108 2-145 138-245 (324)
106 2ekl_A D-3-phosphoglycerate de 98.9 3.6E-09 1.2E-13 104.8 10.7 107 2-144 143-249 (313)
107 3jtm_A Formate dehydrogenase, 98.9 3.2E-09 1.1E-13 106.6 9.9 109 2-144 165-273 (351)
108 4g2n_A D-isomer specific 2-hyd 98.9 1.5E-08 5.2E-13 101.4 13.8 107 2-144 174-280 (345)
109 1lld_A L-lactate dehydrogenase 98.9 2.1E-08 7.3E-13 99.4 13.8 117 1-138 7-134 (319)
110 1mx3_A CTBP1, C-terminal bindi 98.9 1.4E-08 4.9E-13 101.8 12.7 108 2-144 169-276 (347)
111 1a5z_A L-lactate dehydrogenase 98.8 2.3E-08 8E-13 99.3 13.6 117 2-136 1-124 (319)
112 1y6j_A L-lactate dehydrogenase 98.8 1.8E-08 6E-13 100.1 12.5 115 2-137 8-132 (318)
113 4dgs_A Dehydrogenase; structur 98.8 1E-08 3.5E-13 102.4 10.8 104 2-144 172-275 (340)
114 3hg7_A D-isomer specific 2-hyd 98.8 2.2E-09 7.5E-14 106.6 5.8 108 2-145 141-248 (324)
115 4hy3_A Phosphoglycerate oxidor 98.8 3.4E-08 1.2E-12 99.4 14.2 107 2-144 177-283 (365)
116 1ygy_A PGDH, D-3-phosphoglycer 98.8 2.6E-08 9E-13 105.6 14.1 106 2-144 143-249 (529)
117 4e5n_A Thermostable phosphite 98.8 1.6E-08 5.6E-13 100.7 11.5 108 2-144 146-253 (330)
118 2pi1_A D-lactate dehydrogenase 98.8 2.2E-08 7.7E-13 99.9 12.5 106 2-144 142-247 (334)
119 2nac_A NAD-dependent formate d 98.8 9.9E-09 3.4E-13 104.4 10.0 109 2-144 192-300 (393)
120 2g76_A 3-PGDH, D-3-phosphoglyc 98.8 4.1E-08 1.4E-12 98.0 14.2 107 2-144 166-272 (335)
121 3k5p_A D-3-phosphoglycerate de 98.8 1.5E-08 5.2E-13 103.4 11.0 105 2-144 157-261 (416)
122 2ewd_A Lactate dehydrogenase,; 98.8 3.3E-08 1.1E-12 98.1 13.3 115 2-133 5-126 (317)
123 3pp8_A Glyoxylate/hydroxypyruv 98.8 2.7E-09 9.2E-14 105.7 4.8 107 2-144 140-246 (315)
124 1sc6_A PGDH, D-3-phosphoglycer 98.8 2.8E-08 9.7E-13 101.6 12.3 105 2-144 146-250 (404)
125 2j6i_A Formate dehydrogenase; 98.8 2.7E-08 9.1E-13 100.6 11.9 109 2-144 165-274 (364)
126 2v6b_A L-LDH, L-lactate dehydr 98.8 2.9E-08 9.8E-13 98.0 11.6 113 2-134 1-122 (304)
127 1oju_A MDH, malate dehydrogena 98.8 9.4E-08 3.2E-12 93.6 15.0 117 2-135 1-125 (294)
128 1qp8_A Formate dehydrogenase; 98.7 2.8E-08 9.4E-13 97.9 10.3 103 2-144 125-227 (303)
129 2yq5_A D-isomer specific 2-hyd 98.7 5.2E-08 1.8E-12 97.4 12.4 106 2-145 149-254 (343)
130 3fr7_A Putative ketol-acid red 98.7 3.6E-08 1.2E-12 101.4 10.8 206 1-251 54-281 (525)
131 3d0o_A L-LDH 1, L-lactate dehy 98.7 9.7E-08 3.3E-12 94.7 13.4 119 2-136 7-131 (317)
132 3gvi_A Malate dehydrogenase; N 98.7 1.3E-07 4.4E-12 93.9 13.8 119 1-136 7-132 (324)
133 2cuk_A Glycerate dehydrogenase 98.7 3.9E-08 1.3E-12 97.3 10.0 100 2-142 145-244 (311)
134 3pqe_A L-LDH, L-lactate dehydr 98.7 7.4E-08 2.5E-12 95.7 11.6 113 2-136 6-130 (326)
135 1j4a_A D-LDH, D-lactate dehydr 98.7 5E-08 1.7E-12 97.4 10.0 106 2-144 147-252 (333)
136 1lss_A TRK system potassium up 98.7 1.4E-07 4.8E-12 81.0 11.4 125 2-168 5-134 (140)
137 2i99_A MU-crystallin homolog; 98.7 2.4E-08 8.3E-13 98.9 6.7 107 2-144 136-242 (312)
138 3ldh_A Lactate dehydrogenase; 98.6 1.5E-07 5E-12 93.4 11.6 119 1-136 21-146 (330)
139 3fi9_A Malate dehydrogenase; s 98.6 2.2E-07 7.5E-12 92.9 12.4 118 1-137 8-135 (343)
140 3tl2_A Malate dehydrogenase; c 98.6 5.2E-07 1.8E-11 89.2 14.8 118 2-136 9-135 (315)
141 1mld_A Malate dehydrogenase; o 98.6 5.2E-07 1.8E-11 89.3 14.4 113 2-137 1-126 (314)
142 3p7m_A Malate dehydrogenase; p 98.6 6.1E-07 2.1E-11 89.0 14.2 119 1-136 5-130 (321)
143 1smk_A Malate dehydrogenase, g 98.5 4.4E-07 1.5E-11 90.3 12.0 113 1-136 8-133 (326)
144 1dxy_A D-2-hydroxyisocaproate 98.5 1.2E-07 4.1E-12 94.7 7.7 105 2-144 146-250 (333)
145 3oet_A Erythronate-4-phosphate 98.5 1.3E-07 4.6E-12 95.4 7.9 108 2-144 120-227 (381)
146 3nep_X Malate dehydrogenase; h 98.5 4.8E-07 1.7E-11 89.4 11.6 118 2-136 1-126 (314)
147 1ez4_A Lactate dehydrogenase; 98.5 8.3E-07 2.8E-11 88.0 13.0 116 2-136 6-129 (318)
148 1xdw_A NAD+-dependent (R)-2-hy 98.5 1.5E-07 5.2E-12 93.8 7.5 105 2-144 147-251 (331)
149 2o4c_A Erythronate-4-phosphate 98.5 1.8E-07 6.1E-12 94.7 8.1 108 2-144 117-224 (380)
150 1ldn_A L-lactate dehydrogenase 98.5 1.4E-06 4.7E-11 86.3 14.3 119 1-136 6-131 (316)
151 2dc1_A L-aspartate dehydrogena 98.5 3.8E-07 1.3E-11 86.4 9.5 96 2-144 1-101 (236)
152 1obb_A Maltase, alpha-glucosid 98.5 9.8E-07 3.3E-11 91.8 12.9 79 2-88 4-87 (480)
153 2ho3_A Oxidoreductase, GFO/IDH 98.4 1.5E-06 5E-11 86.3 13.2 71 1-89 1-73 (325)
154 1u8x_X Maltose-6'-phosphate gl 98.4 1.4E-06 4.7E-11 90.7 13.0 81 2-90 29-114 (472)
155 2zqz_A L-LDH, L-lactate dehydr 98.4 1.2E-06 4.2E-11 87.0 11.8 114 2-136 10-133 (326)
156 2xxj_A L-LDH, L-lactate dehydr 98.4 2.3E-06 8E-11 84.4 13.7 117 2-137 1-125 (310)
157 3ic5_A Putative saccharopine d 98.4 2.7E-07 9.4E-12 76.7 6.0 74 1-88 5-79 (118)
158 4hkt_A Inositol 2-dehydrogenas 98.4 1.2E-06 4.1E-11 87.2 11.6 69 1-89 3-74 (331)
159 3euw_A MYO-inositol dehydrogen 98.4 1.1E-06 3.9E-11 87.8 11.3 70 1-89 4-76 (344)
160 4aj2_A L-lactate dehydrogenase 98.4 2.1E-06 7.2E-11 85.3 12.7 115 1-135 19-143 (331)
161 3ezy_A Dehydrogenase; structur 98.4 1E-06 3.4E-11 88.2 10.5 71 1-89 2-75 (344)
162 2d4a_B Malate dehydrogenase; a 98.4 2.8E-06 9.6E-11 83.8 13.5 118 3-136 1-124 (308)
163 3uuw_A Putative oxidoreductase 98.4 6.9E-07 2.4E-11 88.0 9.0 69 2-89 7-77 (308)
164 2hk9_A Shikimate dehydrogenase 98.4 9.8E-07 3.3E-11 85.6 9.7 93 2-128 130-222 (275)
165 3vku_A L-LDH, L-lactate dehydr 98.4 1.8E-06 6.1E-11 85.7 11.6 113 2-135 10-132 (326)
166 2i6t_A Ubiquitin-conjugating e 98.4 2.5E-06 8.6E-11 83.9 12.6 111 1-133 14-130 (303)
167 3oj0_A Glutr, glutamyl-tRNA re 98.4 3.7E-07 1.3E-11 79.5 5.9 70 2-89 22-91 (144)
168 3q2i_A Dehydrogenase; rossmann 98.4 1.5E-06 5.1E-11 87.3 11.1 71 1-89 13-86 (354)
169 2x0j_A Malate dehydrogenase; o 98.4 3.5E-06 1.2E-10 82.3 13.1 119 2-135 1-125 (294)
170 2rir_A Dipicolinate synthase, 98.3 3.1E-06 1.1E-10 83.1 12.3 95 2-133 158-252 (300)
171 1y81_A Conserved hypothetical 98.3 1.1E-06 3.8E-11 76.2 7.6 98 2-145 15-116 (138)
172 3mz0_A Inositol 2-dehydrogenas 98.3 2.7E-06 9.2E-11 85.1 11.5 71 2-89 3-77 (344)
173 1b8p_A Protein (malate dehydro 98.3 4.9E-06 1.7E-10 82.8 13.3 116 2-136 6-141 (329)
174 3d4o_A Dipicolinate synthase s 98.3 4.2E-06 1.5E-10 81.8 12.3 93 2-133 156-250 (293)
175 3db2_A Putative NADPH-dependen 98.3 1.9E-06 6.3E-11 86.6 9.8 70 2-90 6-78 (354)
176 2g1u_A Hypothetical protein TM 98.3 4.9E-06 1.7E-10 73.2 11.2 40 2-43 20-59 (155)
177 3e9m_A Oxidoreductase, GFO/IDH 98.2 1.8E-06 6.2E-11 85.9 8.4 70 2-89 6-78 (330)
178 3c1a_A Putative oxidoreductase 98.2 2.7E-06 9.2E-11 84.0 9.5 67 2-89 11-80 (315)
179 3llv_A Exopolyphosphatase-rela 98.2 4.8E-06 1.7E-10 71.8 10.0 43 1-45 6-48 (141)
180 1x7d_A Ornithine cyclodeaminas 98.2 5.1E-06 1.7E-10 83.4 11.4 108 2-139 130-237 (350)
181 2d5c_A AROE, shikimate 5-dehyd 98.2 2E-06 6.7E-11 82.8 8.1 103 3-143 118-220 (263)
182 3cea_A MYO-inositol 2-dehydrog 98.2 5.5E-06 1.9E-10 82.7 11.6 72 1-89 8-82 (346)
183 1s6y_A 6-phospho-beta-glucosid 98.2 4.3E-06 1.5E-10 86.6 10.7 81 2-90 8-95 (450)
184 3e18_A Oxidoreductase; dehydro 98.2 6.4E-06 2.2E-10 82.9 11.5 68 2-89 6-76 (359)
185 3fwz_A Inner membrane protein 98.2 5.8E-06 2E-10 71.5 9.6 71 2-88 8-81 (140)
186 4had_A Probable oxidoreductase 98.2 5.1E-06 1.8E-10 83.1 10.6 72 1-90 23-98 (350)
187 3fef_A Putative glucosidase LP 98.2 6.1E-06 2.1E-10 85.2 11.2 76 2-88 6-85 (450)
188 3ec7_A Putative dehydrogenase; 98.2 5.7E-06 2E-10 83.2 10.7 71 2-89 24-98 (357)
189 3m2t_A Probable dehydrogenase; 98.2 7.3E-06 2.5E-10 82.5 11.2 70 2-89 6-79 (359)
190 3rc1_A Sugar 3-ketoreductase; 98.2 7.5E-06 2.5E-10 82.1 11.0 69 2-89 28-100 (350)
191 2duw_A Putative COA-binding pr 98.1 1.9E-06 6.4E-11 75.4 5.3 98 2-145 14-117 (145)
192 1xea_A Oxidoreductase, GFO/IDH 98.1 4.4E-06 1.5E-10 82.8 8.7 71 1-89 2-74 (323)
193 3qy9_A DHPR, dihydrodipicolina 98.1 5.8E-06 2E-10 78.5 8.8 107 1-159 3-110 (243)
194 3e82_A Putative oxidoreductase 98.1 1.3E-05 4.3E-10 80.9 11.7 67 2-89 8-78 (364)
195 3f4l_A Putative oxidoreductase 98.1 3.1E-06 1.1E-10 84.7 7.1 108 1-144 2-115 (345)
196 1tlt_A Putative oxidoreductase 98.1 6E-06 2.1E-10 81.6 9.0 69 2-89 6-76 (319)
197 1ydw_A AX110P-like protein; st 98.1 1.8E-05 6.2E-10 79.6 12.6 74 1-89 6-82 (362)
198 4dio_A NAD(P) transhydrogenase 98.1 5.4E-06 1.8E-10 84.2 8.5 113 2-128 191-313 (405)
199 2hmt_A YUAA protein; RCK, KTN, 98.1 1.1E-05 3.7E-10 69.2 9.4 41 2-44 7-47 (144)
200 1v8b_A Adenosylhomocysteinase; 98.1 1.3E-05 4.6E-10 83.1 11.6 99 2-139 258-357 (479)
201 3p2y_A Alanine dehydrogenase/p 98.1 5.5E-06 1.9E-10 83.5 8.4 110 2-128 185-303 (381)
202 2glx_A 1,5-anhydro-D-fructose 98.1 1.1E-05 3.8E-10 80.0 10.5 69 2-89 1-73 (332)
203 3evn_A Oxidoreductase, GFO/IDH 98.1 7E-06 2.4E-10 81.5 9.0 70 2-89 6-78 (329)
204 3d64_A Adenosylhomocysteinase; 98.1 1.5E-05 5.2E-10 83.0 11.3 91 2-131 278-368 (494)
205 1omo_A Alanine dehydrogenase; 98.1 1.1E-05 3.8E-10 80.0 9.9 98 2-133 126-223 (322)
206 1o6z_A MDH, malate dehydrogena 98.1 3.7E-05 1.3E-09 75.5 13.4 117 2-136 1-127 (303)
207 3ohs_X Trans-1,2-dihydrobenzen 98.0 1.4E-05 4.6E-10 79.6 9.8 71 1-89 2-77 (334)
208 2p2s_A Putative oxidoreductase 98.0 1E-05 3.5E-10 80.5 8.8 69 2-89 5-77 (336)
209 3hdj_A Probable ornithine cycl 98.0 1.3E-05 4.5E-10 79.1 9.3 98 2-133 122-219 (313)
210 3l4b_C TRKA K+ channel protien 98.0 8.3E-06 2.8E-10 76.0 7.4 41 2-44 1-41 (218)
211 3hhp_A Malate dehydrogenase; M 98.0 5.9E-05 2E-09 74.3 13.2 114 2-137 1-127 (312)
212 3c85_A Putative glutathione-re 98.0 1.1E-05 3.7E-10 72.9 7.2 72 2-88 40-115 (183)
213 3gdo_A Uncharacterized oxidore 98.0 3.4E-05 1.1E-09 77.6 11.4 68 2-90 6-77 (358)
214 3bio_A Oxidoreductase, GFO/IDH 98.0 2.3E-05 7.8E-10 77.0 9.8 87 2-128 10-97 (304)
215 3kb6_A D-lactate dehydrogenase 98.0 7.6E-05 2.6E-09 74.3 13.5 106 2-144 142-247 (334)
216 3kux_A Putative oxidoreductase 97.9 4.6E-05 1.6E-09 76.3 11.9 68 2-90 8-79 (352)
217 3ce6_A Adenosylhomocysteinase; 97.9 4.3E-05 1.5E-09 79.8 11.8 90 2-130 275-364 (494)
218 3h9u_A Adenosylhomocysteinase; 97.9 2.7E-05 9.4E-10 79.5 9.7 90 2-130 212-301 (436)
219 3moi_A Probable dehydrogenase; 97.9 2.2E-05 7.5E-10 79.8 9.1 70 1-89 2-75 (387)
220 2z2v_A Hypothetical protein PH 97.9 1.8E-05 6.2E-10 79.8 8.3 108 2-144 17-124 (365)
221 2ixa_A Alpha-N-acetylgalactosa 97.9 5.5E-05 1.9E-09 78.3 12.0 75 2-89 21-102 (444)
222 4f3y_A DHPR, dihydrodipicolina 97.9 1.8E-05 6.1E-10 76.4 7.2 123 1-159 7-131 (272)
223 1zh8_A Oxidoreductase; TM0312, 97.9 4.7E-05 1.6E-09 76.0 10.1 71 2-89 19-93 (340)
224 2egg_A AROE, shikimate 5-dehyd 97.9 3E-05 1E-09 76.0 8.5 104 2-133 142-246 (297)
225 3abi_A Putative uncharacterize 97.8 3E-05 1E-09 78.2 8.4 71 2-88 17-87 (365)
226 3u3x_A Oxidoreductase; structu 97.8 0.00011 3.7E-09 74.0 12.4 69 2-89 27-99 (361)
227 1h6d_A Precursor form of gluco 97.8 3.1E-05 1.1E-09 79.9 7.9 73 2-89 84-161 (433)
228 1leh_A Leucine dehydrogenase; 97.8 3.1E-05 1.1E-09 77.8 7.5 111 2-159 174-285 (364)
229 3v5n_A Oxidoreductase; structu 97.8 7.1E-05 2.4E-09 76.8 10.2 72 2-90 38-122 (417)
230 3fhl_A Putative oxidoreductase 97.8 5.7E-05 1.9E-09 76.0 9.0 67 2-89 6-76 (362)
231 3n58_A Adenosylhomocysteinase; 97.8 0.00012 4E-09 74.8 11.2 89 2-129 248-336 (464)
232 3dty_A Oxidoreductase, GFO/IDH 97.8 4.6E-05 1.6E-09 77.7 8.3 72 2-90 13-97 (398)
233 4gmf_A Yersiniabactin biosynth 97.7 4.9E-05 1.7E-09 76.8 8.0 71 2-91 8-79 (372)
234 3u95_A Glycoside hydrolase, fa 97.7 0.0003 1E-08 73.3 14.1 78 2-87 1-85 (477)
235 4gqa_A NAD binding oxidoreduct 97.7 8.3E-05 2.8E-09 76.1 9.5 72 2-90 27-108 (412)
236 2vhw_A Alanine dehydrogenase; 97.7 4.5E-05 1.5E-09 77.3 7.0 97 2-127 169-268 (377)
237 3upl_A Oxidoreductase; rossman 97.7 0.0002 6.8E-09 73.6 11.5 87 2-89 24-118 (446)
238 1f06_A MESO-diaminopimelate D- 97.7 4.4E-05 1.5E-09 75.6 6.5 65 2-89 4-69 (320)
239 3gvp_A Adenosylhomocysteinase 97.7 0.00022 7.6E-09 72.6 11.5 90 2-130 221-310 (435)
240 3don_A Shikimate dehydrogenase 97.6 4.6E-05 1.6E-09 73.7 5.9 98 2-133 118-216 (277)
241 3o9z_A Lipopolysaccaride biosy 97.6 0.00013 4.5E-09 71.8 9.2 70 1-90 3-84 (312)
242 3oa2_A WBPB; oxidoreductase, s 97.6 0.00013 4.5E-09 72.0 9.2 70 1-90 3-85 (318)
243 4h7p_A Malate dehydrogenase; s 97.6 0.00032 1.1E-08 69.9 11.9 115 3-135 26-157 (345)
244 3i23_A Oxidoreductase, GFO/IDH 97.6 0.00025 8.7E-09 70.8 10.9 71 1-89 2-76 (349)
245 3u62_A Shikimate dehydrogenase 97.6 9.1E-05 3.1E-09 70.8 7.1 67 3-89 110-177 (253)
246 5mdh_A Malate dehydrogenase; o 97.6 0.00043 1.5E-08 68.7 12.3 115 2-136 4-137 (333)
247 3oqb_A Oxidoreductase; structu 97.6 0.00018 6.3E-09 72.7 9.5 71 2-90 7-95 (383)
248 2eez_A Alanine dehydrogenase; 97.6 7.2E-05 2.5E-09 75.5 6.2 101 2-129 167-268 (369)
249 2nvw_A Galactose/lactose metab 97.6 0.00027 9.3E-09 73.8 10.8 73 2-89 40-119 (479)
250 1dih_A Dihydrodipicolinate red 97.6 4.8E-05 1.6E-09 73.5 4.6 122 2-158 6-129 (273)
251 4h3v_A Oxidoreductase domain p 97.6 0.00013 4.5E-09 73.5 8.1 70 3-90 8-87 (390)
252 1x13_A NAD(P) transhydrogenase 97.5 0.00023 7.8E-09 72.6 9.6 41 2-44 173-213 (401)
253 3l9w_A Glutathione-regulated p 97.5 8.1E-05 2.8E-09 76.3 6.2 71 2-88 5-78 (413)
254 3btv_A Galactose/lactose metab 97.5 0.00019 6.4E-09 74.2 9.0 73 2-89 21-100 (438)
255 1id1_A Putative potassium chan 97.5 0.0002 7E-09 62.5 8.0 40 2-43 4-44 (153)
256 1hye_A L-lactate/malate dehydr 97.5 0.0017 5.7E-08 63.9 14.9 117 2-136 1-130 (313)
257 4gbj_A 6-phosphogluconate dehy 97.5 0.00026 8.9E-09 69.2 8.9 111 325-467 6-123 (297)
258 1up7_A 6-phospho-beta-glucosid 97.5 0.001 3.4E-08 68.1 13.5 78 1-89 2-84 (417)
259 3d4o_A Dipicolinate synthase s 97.5 0.0015 5.1E-08 63.5 14.0 121 309-465 140-265 (293)
260 4fb5_A Probable oxidoreductase 97.5 0.00016 5.5E-09 72.9 7.2 71 3-90 27-106 (393)
261 3jtm_A Formate dehydrogenase, 97.5 0.00055 1.9E-08 68.4 10.9 105 320-456 160-267 (351)
262 3ew7_A LMO0794 protein; Q8Y8U8 97.4 0.00064 2.2E-08 62.4 10.3 71 2-89 1-72 (221)
263 3gg9_A D-3-phosphoglycerate de 97.4 0.00034 1.2E-08 70.0 8.8 101 320-453 156-259 (352)
264 3h2s_A Putative NADH-flavin re 97.4 0.0016 5.5E-08 59.9 12.6 71 2-88 1-72 (224)
265 3phh_A Shikimate dehydrogenase 97.4 0.00033 1.1E-08 67.3 8.0 96 2-133 119-214 (269)
266 1gpj_A Glutamyl-tRNA reductase 97.4 0.00092 3.1E-08 68.2 11.8 70 2-89 168-238 (404)
267 4hy3_A Phosphoglycerate oxidor 97.4 0.00092 3.2E-08 67.1 11.5 103 320-456 172-277 (365)
268 4ew6_A D-galactose-1-dehydroge 97.4 0.00049 1.7E-08 68.2 9.4 61 2-88 26-91 (330)
269 1b7g_O Protein (glyceraldehyde 97.4 0.00052 1.8E-08 68.3 9.5 84 1-88 1-87 (340)
270 3ius_A Uncharacterized conserv 97.4 0.00037 1.3E-08 66.9 8.1 69 1-88 5-73 (286)
271 2czc_A Glyceraldehyde-3-phosph 97.4 0.00012 4.2E-09 72.8 4.7 83 2-89 3-90 (334)
272 3ijp_A DHPR, dihydrodipicolina 97.3 0.00026 9.1E-09 68.6 6.7 124 1-159 21-146 (288)
273 4g2n_A D-isomer specific 2-hyd 97.3 0.00087 3E-08 66.8 10.6 103 320-456 169-274 (345)
274 2b0j_A 5,10-methenyltetrahydro 97.3 0.0052 1.8E-07 58.3 15.0 113 64-205 127-240 (358)
275 4e5n_A Thermostable phosphite 97.3 0.00072 2.5E-08 67.0 9.7 103 320-455 141-246 (330)
276 1iuk_A Hypothetical protein TT 97.3 0.00024 8.2E-09 61.4 5.1 99 2-144 14-116 (140)
277 2w2k_A D-mandelate dehydrogena 97.3 0.0013 4.5E-08 65.7 11.2 105 319-455 158-266 (348)
278 1cf2_P Protein (glyceraldehyde 97.3 0.00015 5.2E-09 72.2 4.2 84 1-88 1-88 (337)
279 3ulk_A Ketol-acid reductoisome 97.3 0.0013 4.6E-08 66.6 10.9 90 2-128 38-133 (491)
280 3r6d_A NAD-dependent epimerase 97.2 0.0004 1.4E-08 64.1 6.6 73 1-87 4-82 (221)
281 4e21_A 6-phosphogluconate dehy 97.2 0.00085 2.9E-08 67.3 9.4 112 323-467 21-141 (358)
282 2rir_A Dipicolinate synthase, 97.2 0.0093 3.2E-07 58.1 16.6 114 318-465 151-267 (300)
283 1l7d_A Nicotinamide nucleotide 97.2 0.00095 3.2E-08 67.6 9.7 41 2-44 173-213 (384)
284 2d59_A Hypothetical protein PH 97.2 0.0007 2.4E-08 58.7 7.5 97 2-144 23-123 (144)
285 3gvx_A Glycerate dehydrogenase 97.2 0.00099 3.4E-08 64.8 9.2 108 321-465 119-233 (290)
286 3pef_A 6-phosphogluconate dehy 97.2 0.0013 4.4E-08 63.7 9.6 108 325-464 2-118 (287)
287 1nvm_B Acetaldehyde dehydrogen 97.2 0.00039 1.3E-08 68.4 6.0 70 2-88 5-81 (312)
288 3qha_A Putative oxidoreductase 97.2 0.0021 7E-08 62.6 11.1 108 324-465 15-129 (296)
289 1y7t_A Malate dehydrogenase; N 97.2 0.0026 8.9E-08 62.8 11.9 73 2-89 5-91 (327)
290 1mx3_A CTBP1, C-terminal bindi 97.2 0.0013 4.5E-08 65.6 9.7 102 321-455 165-269 (347)
291 2nac_A NAD-dependent formate d 97.1 0.0018 6.3E-08 65.5 10.8 104 320-455 187-293 (393)
292 3eag_A UDP-N-acetylmuramate:L- 97.1 0.0031 1.1E-07 62.3 12.2 115 1-145 4-134 (326)
293 3dhn_A NAD-dependent epimerase 97.1 0.00023 7.8E-09 65.9 3.8 73 1-88 4-77 (227)
294 1ff9_A Saccharopine reductase; 97.1 0.0012 4E-08 68.4 9.5 75 2-88 4-78 (450)
295 2gcg_A Glyoxylate reductase/hy 97.1 0.0019 6.5E-08 64.0 10.6 103 320-455 151-256 (330)
296 7mdh_A Protein (malate dehydro 97.1 0.0029 9.8E-08 63.6 11.9 115 2-136 33-166 (375)
297 4dgs_A Dehydrogenase; structur 97.1 0.0017 5.9E-08 64.5 10.2 99 319-454 166-267 (340)
298 4dll_A 2-hydroxy-3-oxopropiona 97.1 0.0017 5.9E-08 63.9 10.0 110 323-465 30-148 (320)
299 4g65_A TRK system potassium up 97.1 0.00063 2.1E-08 70.7 7.1 41 2-44 4-44 (461)
300 1pjc_A Protein (L-alanine dehy 97.1 0.0015 5.1E-08 65.6 9.7 101 2-132 168-272 (361)
301 3ip3_A Oxidoreductase, putativ 97.1 0.00066 2.3E-08 67.4 7.0 73 1-89 2-78 (337)
302 3dr3_A N-acetyl-gamma-glutamyl 97.1 0.00067 2.3E-08 67.4 6.8 34 1-35 4-38 (337)
303 2dbq_A Glyoxylate reductase; D 97.1 0.0023 7.9E-08 63.5 10.7 100 320-453 146-248 (334)
304 2g76_A 3-PGDH, D-3-phosphoglyc 97.1 0.0027 9.1E-08 63.0 11.1 100 320-453 161-263 (335)
305 2aef_A Calcium-gated potassium 97.1 0.00036 1.2E-08 65.4 4.6 39 2-43 10-48 (234)
306 1lc0_A Biliverdin reductase A; 97.1 0.0012 4.2E-08 64.2 8.5 65 1-89 7-76 (294)
307 1gdh_A D-glycerate dehydrogena 97.1 0.0021 7E-08 63.5 10.1 101 321-454 143-247 (320)
308 2d0i_A Dehydrogenase; structur 97.1 0.0022 7.7E-08 63.6 10.3 98 321-453 143-243 (333)
309 2axq_A Saccharopine dehydrogen 97.1 0.0013 4.4E-08 68.4 8.7 72 1-88 23-98 (467)
310 1wwk_A Phosphoglycerate dehydr 97.0 0.0029 1E-07 62.0 10.9 100 320-453 138-240 (307)
311 2j6i_A Formate dehydrogenase; 97.0 0.0023 8E-08 64.2 10.4 104 320-455 160-267 (364)
312 3doj_A AT3G25530, dehydrogenas 97.0 0.0015 5E-08 64.1 8.7 110 323-464 20-138 (310)
313 3obb_A Probable 3-hydroxyisobu 97.0 0.00091 3.1E-08 65.4 7.1 110 325-466 4-122 (300)
314 2pi1_A D-lactate dehydrogenase 97.0 0.002 6.7E-08 64.0 9.4 101 321-456 138-241 (334)
315 1y81_A Conserved hypothetical 97.0 0.003 1E-07 54.3 9.4 106 323-464 13-121 (138)
316 3o8q_A Shikimate 5-dehydrogena 97.0 0.00069 2.4E-08 65.6 5.8 103 2-137 127-230 (281)
317 2yq5_A D-isomer specific 2-hyd 97.0 0.002 6.9E-08 64.1 9.4 100 321-456 145-247 (343)
318 3lk7_A UDP-N-acetylmuramoylala 97.0 0.005 1.7E-07 63.7 12.7 114 2-145 10-138 (451)
319 3qvo_A NMRA family protein; st 97.0 0.0005 1.7E-08 64.3 4.5 74 1-88 23-98 (236)
320 3ba1_A HPPR, hydroxyphenylpyru 97.0 0.0027 9.2E-08 63.0 9.9 93 320-449 160-253 (333)
321 1ygy_A PGDH, D-3-phosphoglycer 97.0 0.0022 7.6E-08 67.7 9.7 101 320-454 138-241 (529)
322 2nu8_A Succinyl-COA ligase [AD 97.0 0.0022 7.6E-08 62.3 8.9 65 2-89 8-75 (288)
323 3dqp_A Oxidoreductase YLBE; al 96.9 0.0005 1.7E-08 63.4 4.1 104 2-127 1-106 (219)
324 2ekl_A D-3-phosphoglycerate de 96.9 0.0037 1.3E-07 61.4 10.4 100 320-453 138-240 (313)
325 1p9l_A Dihydrodipicolinate red 96.9 0.0043 1.5E-07 58.7 10.3 32 2-34 1-34 (245)
326 3evt_A Phosphoglycerate dehydr 96.9 0.0026 9E-08 62.8 9.0 103 320-456 133-238 (324)
327 3jyo_A Quinate/shikimate dehyd 96.9 0.0045 1.6E-07 59.9 10.5 75 2-89 128-205 (283)
328 3ngx_A Bifunctional protein fo 96.9 0.0038 1.3E-07 59.7 9.6 71 2-127 151-222 (276)
329 3ond_A Adenosylhomocysteinase; 96.9 0.0029 9.9E-08 65.5 9.4 88 2-128 266-353 (488)
330 2vt3_A REX, redox-sensing tran 96.8 0.00046 1.6E-08 64.1 3.0 67 2-88 86-155 (215)
331 3pdu_A 3-hydroxyisobutyrate de 96.8 0.002 6.9E-08 62.2 7.7 108 325-464 2-118 (287)
332 1sc6_A PGDH, D-3-phosphoglycer 96.8 0.0033 1.1E-07 64.0 9.4 99 320-454 141-242 (404)
333 1u8f_O GAPDH, glyceraldehyde-3 96.8 0.0048 1.6E-07 61.2 10.3 42 2-44 4-48 (335)
334 3kb6_A D-lactate dehydrogenase 96.8 0.0042 1.4E-07 61.6 9.8 101 320-456 137-241 (334)
335 4gwg_A 6-phosphogluconate dehy 96.8 0.0045 1.5E-07 64.5 10.1 118 324-469 4-131 (484)
336 3k5p_A D-3-phosphoglycerate de 96.8 0.0038 1.3E-07 63.5 9.2 99 321-455 153-254 (416)
337 3do5_A HOM, homoserine dehydro 96.7 0.0031 1.1E-07 62.4 8.1 118 1-144 2-133 (327)
338 3g0o_A 3-hydroxyisobutyrate de 96.7 0.0024 8.2E-08 62.3 7.2 109 324-464 7-125 (303)
339 1hdo_A Biliverdin IX beta redu 96.7 0.0028 9.6E-08 57.2 7.2 73 2-88 4-77 (206)
340 2yyy_A Glyceraldehyde-3-phosph 96.7 0.0031 1E-07 62.8 7.9 106 1-125 2-111 (343)
341 1qp8_A Formate dehydrogenase; 96.7 0.0047 1.6E-07 60.4 9.1 95 321-453 121-218 (303)
342 3e8x_A Putative NAD-dependent 96.7 0.0015 5.3E-08 60.8 5.4 71 2-88 22-94 (236)
343 1j5p_A Aspartate dehydrogenase 96.7 0.0022 7.7E-08 60.7 6.5 79 2-128 13-92 (253)
344 1a4i_A Methylenetetrahydrofola 96.7 0.0066 2.3E-07 58.8 9.8 72 2-128 166-238 (301)
345 4ina_A Saccharopine dehydrogen 96.7 0.004 1.4E-07 63.5 8.6 42 1-44 1-45 (405)
346 1jw9_B Molybdopterin biosynthe 96.6 0.0046 1.6E-07 58.6 8.3 33 2-36 32-65 (249)
347 3hg7_A D-isomer specific 2-hyd 96.6 0.0027 9.1E-08 62.7 6.8 101 321-455 137-240 (324)
348 2zyd_A 6-phosphogluconate dehy 96.6 0.0056 1.9E-07 63.8 9.6 116 321-466 12-138 (480)
349 1edz_A 5,10-methylenetetrahydr 96.6 0.0016 5.5E-08 63.9 5.0 73 2-89 178-256 (320)
350 1p77_A Shikimate 5-dehydrogena 96.6 0.0015 5.3E-08 62.8 4.9 102 2-136 120-223 (272)
351 3h9u_A Adenosylhomocysteinase; 96.6 0.012 4.1E-07 60.0 11.5 120 314-469 201-323 (436)
352 4a26_A Putative C-1-tetrahydro 96.6 0.0062 2.1E-07 59.0 9.0 72 2-128 166-240 (300)
353 1npy_A Hypothetical shikimate 96.6 0.012 4.1E-07 56.5 11.0 67 2-90 120-187 (271)
354 3qsg_A NAD-binding phosphogluc 96.6 0.0052 1.8E-07 60.3 8.6 108 324-464 24-142 (312)
355 1nyt_A Shikimate 5-dehydrogena 96.6 0.0032 1.1E-07 60.5 6.9 100 2-133 120-220 (271)
356 2h78_A Hibadh, 3-hydroxyisobut 96.6 0.0037 1.3E-07 60.8 7.5 107 325-464 4-120 (302)
357 3pp8_A Glyoxylate/hydroxypyruv 96.6 0.0044 1.5E-07 60.9 7.9 103 320-456 135-240 (315)
358 2duw_A Putative COA-binding pr 96.6 0.0032 1.1E-07 54.6 6.1 107 324-464 13-122 (145)
359 1oi7_A Succinyl-COA synthetase 96.6 0.034 1.1E-06 53.8 14.0 105 2-145 8-115 (288)
360 3mtj_A Homoserine dehydrogenas 96.6 0.0054 1.9E-07 63.0 8.7 66 3-88 12-88 (444)
361 1b0a_A Protein (fold bifunctio 96.5 0.0079 2.7E-07 57.9 9.2 71 2-127 160-231 (288)
362 3oet_A Erythronate-4-phosphate 96.5 0.0037 1.3E-07 62.9 7.1 100 319-456 114-221 (381)
363 3l6d_A Putative oxidoreductase 96.5 0.0075 2.6E-07 58.9 9.2 111 322-465 7-125 (306)
364 3pwz_A Shikimate dehydrogenase 96.5 0.014 4.7E-07 56.1 10.6 102 2-137 121-224 (272)
365 3m2p_A UDP-N-acetylglucosamine 96.5 0.0054 1.9E-07 59.5 7.8 70 1-88 2-72 (311)
366 1j4a_A D-LDH, D-lactate dehydr 96.5 0.0074 2.5E-07 59.8 8.7 101 321-456 143-246 (333)
367 4ezb_A Uncharacterized conserv 96.4 0.0097 3.3E-07 58.5 9.5 108 325-464 25-144 (317)
368 4a5o_A Bifunctional protein fo 96.4 0.013 4.5E-07 56.3 10.0 72 2-128 162-234 (286)
369 3p2o_A Bifunctional protein fo 96.4 0.012 4E-07 56.7 9.6 71 2-127 161-232 (285)
370 3l07_A Bifunctional protein fo 96.4 0.013 4.4E-07 56.4 9.8 71 2-127 162-233 (285)
371 3e5r_O PP38, glyceraldehyde-3- 96.4 0.008 2.7E-07 59.6 8.7 41 2-43 4-47 (337)
372 2p4q_A 6-phosphogluconate dehy 96.4 0.011 3.7E-07 61.9 9.8 114 324-466 10-134 (497)
373 3e48_A Putative nucleoside-dip 96.3 0.0027 9.2E-08 60.9 4.7 74 2-88 1-75 (289)
374 1vpd_A Tartronate semialdehyde 96.3 0.0098 3.3E-07 57.5 8.8 107 326-464 7-122 (299)
375 2dt5_A AT-rich DNA-binding pro 96.3 0.00076 2.6E-08 62.4 0.6 68 2-88 81-150 (211)
376 4hv4_A UDP-N-acetylmuramate--L 96.3 0.018 6.3E-07 60.1 11.2 117 1-145 22-148 (494)
377 3dtt_A NADP oxidoreductase; st 96.3 0.0061 2.1E-07 57.5 6.9 99 321-449 16-126 (245)
378 2cuk_A Glycerate dehydrogenase 96.3 0.011 3.6E-07 58.1 8.7 94 321-453 141-237 (311)
379 2ozp_A N-acetyl-gamma-glutamyl 96.2 0.0039 1.3E-07 62.1 5.2 34 1-35 4-38 (345)
380 1dxy_A D-2-hydroxyisocaproate 96.2 0.011 3.9E-07 58.5 8.5 101 320-456 141-244 (333)
381 2o4c_A Erythronate-4-phosphate 96.2 0.0083 2.8E-07 60.4 7.4 99 319-455 111-217 (380)
382 4b4o_A Epimerase family protei 96.2 0.011 3.7E-07 57.0 8.0 33 2-36 1-34 (298)
383 3d64_A Adenosylhomocysteinase; 96.1 0.026 8.8E-07 58.7 11.1 102 318-455 271-375 (494)
384 1v8b_A Adenosylhomocysteinase; 96.1 0.046 1.6E-06 56.5 13.0 104 318-457 251-357 (479)
385 1ys4_A Aspartate-semialdehyde 96.1 0.0065 2.2E-07 60.7 6.3 31 2-33 9-40 (354)
386 4a7p_A UDP-glucose dehydrogena 96.1 0.028 9.7E-07 57.8 11.2 107 324-451 8-133 (446)
387 1xdw_A NAD+-dependent (R)-2-hy 96.1 0.014 4.8E-07 57.7 8.5 99 321-455 143-244 (331)
388 1nvt_A Shikimate 5'-dehydrogen 96.1 0.0064 2.2E-07 58.9 5.8 108 2-133 129-236 (287)
389 3gvp_A Adenosylhomocysteinase 96.1 0.062 2.1E-06 54.6 13.2 123 312-470 208-333 (435)
390 3ggo_A Prephenate dehydrogenas 96.0 0.019 6.6E-07 56.3 9.1 98 323-451 32-132 (314)
391 3dfz_A SIRC, precorrin-2 dehyd 96.0 0.25 8.5E-06 45.8 16.2 33 2-36 32-64 (223)
392 3d1l_A Putative NADP oxidoredu 96.0 0.011 3.9E-07 56.1 7.3 101 323-456 9-111 (266)
393 3fbt_A Chorismate mutase and s 96.0 0.0093 3.2E-07 57.6 6.6 66 2-89 123-189 (282)
394 4hb9_A Similarities with proba 96.0 0.0042 1.5E-07 62.3 4.4 33 2-36 2-34 (412)
395 1np3_A Ketol-acid reductoisome 96.0 0.01 3.5E-07 58.9 7.0 92 323-448 15-108 (338)
396 2yv1_A Succinyl-COA ligase [AD 96.0 0.043 1.5E-06 53.3 11.3 104 3-145 15-121 (294)
397 2dpo_A L-gulonate 3-dehydrogen 96.0 0.025 8.4E-07 55.7 9.6 121 324-457 6-133 (319)
398 1qyc_A Phenylcoumaran benzylic 96.0 0.007 2.4E-07 58.5 5.5 73 1-87 4-86 (308)
399 3gpi_A NAD-dependent epimerase 96.0 0.0025 8.6E-08 61.1 2.3 36 1-38 3-38 (286)
400 4e12_A Diketoreductase; oxidor 96.0 0.034 1.2E-06 53.5 10.4 118 324-456 4-130 (283)
401 2iz1_A 6-phosphogluconate dehy 95.9 0.02 6.8E-07 59.5 9.2 113 324-466 5-128 (474)
402 1vkn_A N-acetyl-gamma-glutamyl 95.9 0.016 5.5E-07 57.7 7.9 95 1-129 13-109 (351)
403 2jl1_A Triphenylmethane reduct 95.9 0.0044 1.5E-07 59.2 3.8 74 2-87 1-75 (287)
404 2ep5_A 350AA long hypothetical 95.9 0.0083 2.8E-07 59.9 5.8 31 2-33 5-36 (350)
405 1qyd_A Pinoresinol-lariciresin 95.9 0.0085 2.9E-07 58.0 5.8 74 1-88 4-86 (313)
406 2gas_A Isoflavone reductase; N 95.9 0.0059 2E-07 58.9 4.5 74 1-88 2-86 (307)
407 2izz_A Pyrroline-5-carboxylate 95.9 0.031 1.1E-06 54.9 9.8 100 324-456 22-127 (322)
408 1c1d_A L-phenylalanine dehydro 95.9 0.04 1.4E-06 54.8 10.6 110 2-159 176-286 (355)
409 2pgd_A 6-phosphogluconate dehy 95.8 0.031 1.1E-06 58.2 10.2 114 325-466 3-126 (482)
410 1xq6_A Unknown protein; struct 95.8 0.0095 3.2E-07 55.4 5.8 74 1-87 4-78 (253)
411 3gg2_A Sugar dehydrogenase, UD 95.8 0.03 1E-06 57.8 9.9 105 325-451 3-126 (450)
412 2yv2_A Succinyl-COA synthetase 95.8 0.14 4.9E-06 49.6 14.3 105 2-145 14-122 (297)
413 2ejw_A HDH, homoserine dehydro 95.8 0.0027 9.3E-08 62.8 1.9 64 2-88 4-76 (332)
414 3cky_A 2-hydroxymethyl glutara 95.8 0.021 7.2E-07 55.2 8.2 108 325-464 5-121 (301)
415 2g5c_A Prephenate dehydrogenas 95.8 0.03 1E-06 53.6 9.0 96 325-451 2-100 (281)
416 3tnl_A Shikimate dehydrogenase 95.8 0.038 1.3E-06 54.2 9.8 74 2-89 155-237 (315)
417 3c1o_A Eugenol synthase; pheny 95.8 0.0068 2.3E-07 59.0 4.5 34 1-36 4-38 (321)
418 1xyg_A Putative N-acetyl-gamma 95.7 0.0064 2.2E-07 60.9 4.3 32 2-34 17-49 (359)
419 1y1p_A ARII, aldehyde reductas 95.7 0.0094 3.2E-07 58.3 5.5 40 2-43 12-52 (342)
420 2x4g_A Nucleoside-diphosphate- 95.7 0.0035 1.2E-07 61.5 2.3 73 1-87 13-86 (342)
421 3n58_A Adenosylhomocysteinase; 95.7 0.076 2.6E-06 54.2 12.1 103 310-448 233-335 (464)
422 2c2x_A Methylenetetrahydrofola 95.7 0.034 1.2E-06 53.3 9.0 73 2-127 159-232 (281)
423 1lnq_A MTHK channels, potassiu 95.7 0.0025 8.7E-08 63.0 1.2 69 2-88 116-187 (336)
424 2r00_A Aspartate-semialdehyde 95.6 0.0057 1.9E-07 60.7 3.4 33 1-33 3-37 (336)
425 2gf2_A Hibadh, 3-hydroxyisobut 95.6 0.024 8.4E-07 54.6 7.7 92 326-450 2-97 (296)
426 2nqt_A N-acetyl-gamma-glutamyl 95.5 0.014 4.8E-07 58.2 5.8 32 1-33 9-46 (352)
427 3pid_A UDP-glucose 6-dehydroge 95.5 0.047 1.6E-06 55.9 9.6 106 323-451 35-157 (432)
428 3i6i_A Putative leucoanthocyan 95.5 0.0098 3.4E-07 58.7 4.5 73 2-88 11-93 (346)
429 3keo_A Redox-sensing transcrip 95.5 0.0039 1.3E-07 57.5 1.4 69 2-88 85-158 (212)
430 1orr_A CDP-tyvelose-2-epimeras 95.4 0.041 1.4E-06 53.8 8.9 33 1-35 1-34 (347)
431 2f00_A UDP-N-acetylmuramate--L 95.3 0.12 4.2E-06 53.7 12.5 117 1-145 19-145 (491)
432 3cps_A Glyceraldehyde 3-phosph 95.3 0.094 3.2E-06 52.1 11.0 32 1-33 17-48 (354)
433 3kkj_A Amine oxidase, flavin-c 95.3 0.012 4E-07 54.1 4.2 32 3-36 4-35 (336)
434 3oh8_A Nucleoside-diphosphate 95.3 0.013 4.6E-07 61.4 5.1 36 1-38 147-183 (516)
435 3hn7_A UDP-N-acetylmuramate-L- 95.3 0.14 4.9E-06 53.7 13.0 115 1-145 19-148 (524)
436 3p2y_A Alanine dehydrogenase/p 95.3 0.17 6E-06 50.6 12.9 112 322-447 182-302 (381)
437 2cvz_A Dehydrogenase, 3-hydrox 95.3 0.035 1.2E-06 53.2 7.6 104 326-464 3-113 (289)
438 2r6j_A Eugenol synthase 1; phe 95.3 0.017 5.9E-07 56.1 5.5 71 3-87 13-88 (318)
439 4dpl_A Malonyl-COA/succinyl-CO 95.3 0.0064 2.2E-07 60.8 2.3 31 2-33 8-39 (359)
440 4dpk_A Malonyl-COA/succinyl-CO 95.3 0.0064 2.2E-07 60.8 2.3 31 2-33 8-39 (359)
441 3b1f_A Putative prephenate deh 95.3 0.028 9.6E-07 54.0 6.9 110 324-464 6-124 (290)
442 1p3d_A UDP-N-acetylmuramate--a 95.3 0.12 4.2E-06 53.4 12.2 117 1-145 18-144 (475)
443 2ahr_A Putative pyrroline carb 95.2 0.065 2.2E-06 50.5 9.2 96 325-457 4-100 (259)
444 3k96_A Glycerol-3-phosphate de 95.2 0.057 1.9E-06 53.9 9.1 110 324-452 29-138 (356)
445 3cmc_O GAPDH, glyceraldehyde-3 95.2 0.044 1.5E-06 54.1 8.1 42 1-43 1-44 (334)
446 3tri_A Pyrroline-5-carboxylate 95.2 0.11 3.6E-06 50.0 10.6 102 324-457 3-108 (280)
447 2uyy_A N-PAC protein; long-cha 95.1 0.032 1.1E-06 54.4 7.0 93 325-450 31-127 (316)
448 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.1 0.067 2.3E-06 55.6 9.7 115 326-466 3-128 (478)
449 3gt0_A Pyrroline-5-carboxylate 95.1 0.036 1.2E-06 52.0 7.0 100 325-457 3-107 (247)
450 1mv8_A GMD, GDP-mannose 6-dehy 95.1 0.073 2.5E-06 54.5 9.8 105 326-451 2-127 (436)
451 1gad_O D-glyceraldehyde-3-phos 95.1 0.068 2.3E-06 52.7 9.1 41 1-42 1-43 (330)
452 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.076 2.6E-06 55.1 9.8 107 324-451 8-132 (478)
453 2wm3_A NMRA-like family domain 95.1 0.022 7.6E-07 54.7 5.4 72 2-87 6-81 (299)
454 3t4e_A Quinate/shikimate dehyd 95.1 0.11 3.8E-06 50.8 10.4 74 2-89 149-231 (312)
455 1vl6_A Malate oxidoreductase; 95.0 0.091 3.1E-06 52.6 9.9 71 2-87 193-272 (388)
456 3h2z_A Mannitol-1-phosphate 5- 95.0 0.017 5.8E-07 58.2 4.7 82 2-87 1-88 (382)
457 2x5o_A UDP-N-acetylmuramoylala 95.0 0.05 1.7E-06 55.8 8.4 117 2-145 6-130 (439)
458 2f1k_A Prephenate dehydrogenas 95.0 0.061 2.1E-06 51.2 8.5 92 326-449 2-93 (279)
459 2ywl_A Thioredoxin reductase r 95.0 0.021 7.2E-07 50.5 4.8 34 1-36 1-34 (180)
460 3st7_A Capsular polysaccharide 95.0 0.11 3.8E-06 51.5 10.7 32 2-35 1-34 (369)
461 1i36_A Conserved hypothetical 95.0 0.063 2.2E-06 50.7 8.4 90 326-450 2-91 (264)
462 2fp4_A Succinyl-COA ligase [GD 95.0 0.13 4.4E-06 50.1 10.8 63 3-88 15-81 (305)
463 1iuk_A Hypothetical protein TT 95.0 0.092 3.1E-06 44.9 8.7 107 324-464 13-122 (140)
464 3c8m_A Homoserine dehydrogenas 95.0 0.019 6.4E-07 56.8 4.8 78 2-89 7-97 (331)
465 2zcu_A Uncharacterized oxidore 95.0 0.018 6.3E-07 54.7 4.6 73 3-87 1-74 (286)
466 1a4i_A Methylenetetrahydrofola 94.9 0.16 5.4E-06 49.1 11.0 91 307-449 149-239 (301)
467 3pwk_A Aspartate-semialdehyde 94.9 0.015 5.2E-07 58.2 3.8 30 2-33 3-36 (366)
468 2g1u_A Hypothetical protein TM 94.9 0.12 4.1E-06 44.6 9.2 110 321-461 16-133 (155)
469 3fpf_A Mtnas, putative unchara 94.9 0.23 8E-06 48.0 12.1 97 2-127 124-222 (298)
470 3slg_A PBGP3 protein; structur 94.8 0.0088 3E-07 59.5 2.0 74 1-87 24-100 (372)
471 3ruf_A WBGU; rossmann fold, UD 94.8 0.022 7.5E-07 56.1 4.8 34 1-36 25-59 (351)
472 3oj0_A Glutr, glutamyl-tRNA re 94.8 0.035 1.2E-06 47.5 5.5 90 324-448 21-111 (144)
473 3hm2_A Precorrin-6Y C5,15-meth 94.8 0.26 9E-06 42.8 11.5 114 2-145 27-144 (178)
474 4dgk_A Phytoene dehydrogenase; 94.8 0.018 6.1E-07 59.8 4.3 34 1-36 1-34 (501)
475 2c5a_A GDP-mannose-3', 5'-epim 94.8 0.012 4.2E-07 58.9 2.9 36 1-38 29-65 (379)
476 1zud_1 Adenylyltransferase THI 94.8 0.073 2.5E-06 50.3 8.1 40 2-43 29-69 (251)
477 2vns_A Metalloreductase steap3 94.7 0.064 2.2E-06 49.3 7.4 95 324-454 28-122 (215)
478 3c24_A Putative oxidoreductase 94.7 0.037 1.3E-06 53.2 6.1 96 325-453 12-107 (286)
479 1yb4_A Tartronic semialdehyde 94.7 0.029 9.9E-07 54.0 5.2 93 325-450 4-99 (295)
480 1b0a_A Protein (fold bifunctio 94.7 0.16 5.6E-06 48.7 10.2 89 307-447 143-231 (288)
481 3qj4_A Renalase; FAD/NAD(P)-bi 94.7 0.021 7.3E-07 56.1 4.2 34 1-36 1-37 (342)
482 2hk9_A Shikimate dehydrogenase 94.6 0.052 1.8E-06 52.0 6.8 109 321-462 126-238 (275)
483 2yjz_A Metalloreductase steap4 93.6 0.0058 2E-07 55.9 0.0 93 322-451 17-109 (201)
484 2x5j_O E4PDH, D-erythrose-4-ph 94.6 0.13 4.6E-06 50.8 9.9 41 2-43 3-48 (339)
485 3ing_A Homoserine dehydrogenas 94.6 0.075 2.6E-06 52.3 7.9 35 2-36 5-45 (325)
486 1hdg_O Holo-D-glyceraldehyde-3 94.6 0.12 4.1E-06 50.9 9.3 42 2-43 1-45 (332)
487 3p2o_A Bifunctional protein fo 94.6 0.21 7.1E-06 48.0 10.6 81 316-447 152-232 (285)
488 3g79_A NDP-N-acetyl-D-galactos 94.5 0.28 9.5E-06 50.8 12.4 110 324-451 18-151 (478)
489 1f0y_A HCDH, L-3-hydroxyacyl-C 94.5 0.14 4.9E-06 49.4 9.8 120 325-456 16-145 (302)
490 1xgk_A Nitrogen metabolite rep 94.5 0.27 9.2E-06 48.6 12.0 36 2-39 6-42 (352)
491 4dio_A NAD(P) transhydrogenase 94.4 0.15 5E-06 51.6 9.7 132 322-466 188-339 (405)
492 3ce6_A Adenosylhomocysteinase; 94.4 0.29 1E-05 50.8 12.2 100 321-456 271-373 (494)
493 2d5c_A AROE, shikimate 5-dehyd 94.4 0.11 3.6E-06 49.4 8.2 108 320-463 113-226 (263)
494 3hsk_A Aspartate-semialdehyde 94.2 0.027 9.3E-07 56.6 3.9 30 2-32 20-50 (381)
495 3l07_A Bifunctional protein fo 94.2 0.31 1.1E-05 46.7 11.1 88 308-447 146-233 (285)
496 1kyq_A Met8P, siroheme biosynt 94.2 0.046 1.6E-06 52.4 5.3 33 2-36 14-46 (274)
497 2rh8_A Anthocyanidin reductase 94.2 0.5 1.7E-05 45.8 13.0 34 2-37 10-44 (338)
498 3tz6_A Aspartate-semialdehyde 94.2 0.024 8.3E-07 56.2 3.3 32 2-33 2-35 (344)
499 3e05_A Precorrin-6Y C5,15-meth 94.2 0.71 2.4E-05 41.3 13.1 114 2-145 42-159 (204)
500 1t4b_A Aspartate-semialdehyde 94.2 0.031 1.1E-06 56.0 4.1 70 1-88 1-75 (367)
No 1
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=100.00 E-value=4.9e-95 Score=747.89 Aligned_cols=419 Identities=34% Similarity=0.545 Sum_probs=384.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|.+|+|||+||||+++|.+|+++ ||+|+|+|+|+++++.|++|..|++||++++++++ ...+++++|+|+++++++|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 56899999999999999999998 99999999999999999999999999999999876 5678999999999999999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCC---CCcEEEEecCCCcccHHHH-HHHHHhhcCCCceEEeeC
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSK---SDKIVVEKSTVPVKTAEAI-EKILMHNSRGINFQILSN 155 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~---~~~iVi~~STv~~gt~~~l-~~~l~~~~~g~~~~v~~~ 155 (480)
|++|||||||.+.++ .+|+++++++.+.|+++++ ++++||++||+||||++++ .+.+++.+++.+|+++|+
T Consensus 99 d~~~I~VpTP~~~d~-----~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~ 173 (444)
T 3vtf_A 99 DATFIAVGTPPAPDG-----SADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASN 173 (444)
T ss_dssp SEEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEEC
T ss_pred CceEEEecCCCCCCC-----CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecC
Confidence 999999999988754 8999999999999999986 5789999999999999985 566776655789999999
Q ss_pred CcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 156 PEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|||+.||++++++.+|+|||+|+. ++++.+.+.++|+.+. .++.++++++||++|+++|+|++++|+|+||++.
T Consensus 174 PErl~eG~a~~d~~~~~riViG~~----~~~a~~~~~~ly~~~~--~~~~~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ 247 (444)
T 3vtf_A 174 PEFLREGSALEDFFKPDRIVIGAG----DERAASFLLDVYKAVD--APKLVMKPREAELVKYASNVFLALKISFANEVGL 247 (444)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHTTTSC--SCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccccCCcEEEcCC----CHHHHHHHHHHHhccC--CCEEEechhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999986 4788999999999874 4677889999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHH
Q 011650 236 LCEATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVV 315 (480)
Q Consensus 236 l~~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++|++++++++|+|++|++||+||||||||||+++|.+.|++.|++ .+++++++++|++||.++++++.
T Consensus 248 ice~~GiDv~eV~~a~~~d~rig~~~l~PG~G~GG~CipkD~~~L~~~a~~~g~~--~~li~a~~~iN~~~~~~vv~~l~ 325 (444)
T 3vtf_A 248 LAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGGSCFPKDTLAFIRFGESLGLE--MAISKAVLRVNEYMPRYAVQLLE 325 (444)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTSCSTTCCCSSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHhccCCCCCCCCCCCCCCCCCcccCcCHHHHHHHHHhcCCC--HHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 78999999999999999999998
Q ss_pred HHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCC
Q 011650 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPS 395 (480)
Q Consensus 316 ~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+ +.++++||+|||+|||+||+|+||||++.|++.|.++|++|.+|||++.++.. ..++
T Consensus 326 ~~~-~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~-~~~~------------------ 385 (444)
T 3vtf_A 326 ERL-GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKAR-AVLG------------------ 385 (444)
T ss_dssp HHH-TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHH-HHHG------------------
T ss_pred HHc-cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHH-HhcC------------------
Confidence 876 57899999999999999999999999999999999999999999999965433 3332
Q ss_pred CcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCC
Q 011650 396 TINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKP 468 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~ 468 (480)
..+++++++++++++||+|||+|+|++|+++|+ +.+ +|||+||+++++. .+.|.||||.
T Consensus 386 --~~~~~~~~~~~a~~~aDavvi~t~h~ef~~ld~-------~~~-vv~D~Rni~~~~~----~~~y~gigWs 444 (444)
T 3vtf_A 386 --DSVTYVEDPQALLDQVEGVIIATAWPQYEGLDY-------RGK-VVVDGRYVKKARE----AKIYEGVAWA 444 (444)
T ss_dssp --GGSEECSCHHHHHHHCSEEEECSCCGGGGGSCC-------TTC-EEEESSCCGGGGG----SSEEEESSCC
T ss_pred --CCceecCCHHHHHhCCCEEEEccCCHHHhCCCc-------CCC-EEEECCCCCChhh----hcceeeeecC
Confidence 357888999999999999999999999999985 345 9999999999753 4589999974
No 2
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=1.6e-92 Score=735.86 Aligned_cols=432 Identities=37% Similarity=0.634 Sum_probs=396.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
.+|+|||+||||+++|.+|+++ ||+|++||+++++++.++++..+++||++++++++ ...+++++|+|+++++++||
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 3799999999999999999998 99999999999999999999999999999998865 34678999999998899999
Q ss_pred EEEEEccCCCCc-CCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 81 IVFVSVNTPTKT-QGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~-~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||||.+. ++ .+|++++++++++|.++++++++||++||++|||++++.+.+++...+.+|.++++|||+
T Consensus 87 vvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a 161 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFL 161 (446)
T ss_dssp EEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCC
T ss_pred EEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccc
Confidence 999999999754 33 899999999999999999999999999999999999998888776544679999999999
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCC--eEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPED--RILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~--~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
.+|.+++++.+|++||+|+. ++++.++++++|+.+++.. ++..+++++||++|+++|++++++|+++||++.+|
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~----~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTE----DEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECS----CHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCC----cHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 4789999999999986422 57889999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSS 317 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||+|+++++||+||||+|+|||++++.+.|++.|++ .+++++++++|++||.++++++.+.
T Consensus 238 ~~~GiD~~~v~~~~~~~~rig~~~l~pg~G~gg~c~~KD~~~l~~~A~~~g~~--~~l~~~~~~iN~~~~~~~~~~i~~~ 315 (446)
T 4a7p_A 238 EQVGADVQEVSRGIGMDNRIGGKFLHAGPGYGGSCFPKDTLALMKTAADNETP--LRIVEATVQVNDARKRAMGRKVIKA 315 (446)
T ss_dssp HHTTCCHHHHHHHHHTSTTC---CCCCCSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHhcCCCCCCccCCCCCCcchhhHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred hcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 318 ~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+++.++++||+|||+||||||+|+||||++.|++.|.++|++|.+|||++.++. .+. +
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~---------------------~ 373 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQA-SKM---------------------L 373 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHH-GGG---------------------C
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhH-HHh---------------------c
Confidence 988899999999999999999999999999999999999999999999997432 222 1
Q ss_pred CceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCC
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPL 469 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~ 469 (480)
+++.+++++++++++||+|||+|+|++|+++||+.+.+.|+.| +|||+||+++++.+++.||.|+||||+.
T Consensus 374 ~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~iG~~~ 444 (446)
T 4a7p_A 374 TDVEFVENPYAAADGADALVIVTEWDAFRALDLTRIKNSLKSP-VLVDLRNIYPPAELERAGLQYTGVGKPS 444 (446)
T ss_dssp SSCCBCSCHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSC-BEECSSCCSCHHHHHHTTCBCCCSSCC-
T ss_pred CCceEecChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCC-EEEECCCCCCHHHHHhcCCEEEEecCCC
Confidence 3467788999999999999999999999999999999999888 8999999999999999999999999974
No 3
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.7e-88 Score=709.14 Aligned_cols=432 Identities=37% Similarity=0.612 Sum_probs=392.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.++++..+++|+++++++++ ...+++++++|+++++++||
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 7999999999999999999998 99999999999999999999999999999987754 33578999999999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC----CCceEEeeCC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR----GINFQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~----g~~~~v~~~P 156 (480)
+||+|||||.+.+ ..+|++++++++++|.++++++++|+++||++|||++++.+.+++... +.+|.++++|
T Consensus 81 vViiaVptp~~~~-----~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~P 155 (450)
T 3gg2_A 81 IIFIAVGTPAGED-----GSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNP 155 (450)
T ss_dssp EEEECCCCCBCTT-----SSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEcCCCcccC-----CCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEech
Confidence 9999999998764 389999999999999999999999999999999999999888776432 3679999999
Q ss_pred cccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCC-CeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 157 EFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPE-DRILCTNLWSAEVSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|++.+|.+.+++.+|+++++|+. ++++.++++++|+.+.+. .+++.+++++||++|+++|++++++++++||++.
T Consensus 156 e~a~eG~~~~~~~~p~~ivvG~~----~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 156 EFLKEGNAIDDFMKPDRVVVGVD----SDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhccCCCEEEEEcC----CHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 478999999999988642 3678899999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHH
Q 011650 236 LCEATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVV 315 (480)
Q Consensus 236 l~~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++|+++++++||+++++++||+||||+|+|||++++.+.|++.|++ .+++++++++|+.||.++++++.
T Consensus 232 l~~~~Gid~~~v~~~~~~~~rig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~--~~l~~~~~~iN~~~~~~~~~~~~ 309 (450)
T 3gg2_A 232 LCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYR--MEVLEAVERVNEKQKSILFDKFS 309 (450)
T ss_dssp HHHHHTCCHHHHHHHHHTSTTTCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHcCCCCCCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCC
Q 011650 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPS 395 (480)
Q Consensus 316 ~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+++.++++||+|||+||||||+|+||||++.|++.|.++|++|.+|||++.++ ....|+
T Consensus 310 ~~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~~------------------ 370 (450)
T 3gg2_A 310 TYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKE-AQKRLG------------------ 370 (450)
T ss_dssp HHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHG------------------
T ss_pred HHhcccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHH-HHHhcC------------------
Confidence 9998889999999999999999999999999999999999999999999999753 233332
Q ss_pred CcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCc
Q 011650 396 TINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLD 470 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~ 470 (480)
..+++++++++++++||+|||+|+|++|+++||+.+.+.|+.| +|||+||+++++ ++.||.|+||||+..
T Consensus 371 --~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~--~~~g~~y~~ig~~~~ 440 (450)
T 3gg2_A 371 --DKVEYTTDMYDAVRGAEALFHVTEWKEFRMPDWSALSQAMAAS-LVIDGRNVYELP--ADSDFTLLNIGNSAI 440 (450)
T ss_dssp --GGSEECSSHHHHTTTCSCEEECSCCGGGSSCCHHHHHHHSSSC-EEEESSCCCCCC------CEEEECC----
T ss_pred --ccceecCCHHHHhcCCCEEEEccCCHHHhhcCHHHHHHhcCCC-EEEECCCCCChH--HhCCCEEEEeccccc
Confidence 2467889999999999999999999999999999999999988 899999999988 788999999999754
No 4
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=3e-88 Score=707.36 Aligned_cols=430 Identities=25% Similarity=0.393 Sum_probs=389.0
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHH----HHHHHHcCCCCC--CCCChHHHHHH-hcCCCEEEecCH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVP----RINAWNSDQLPI--YEPGLEEVVKQ-CRGKNLFFSTDV 72 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~----~v~~l~~g~~~~--~e~~l~~~~~~-~~~~~l~~t~d~ 72 (480)
||||+|||+|+||+++|.+|+++ +|| +|++||++++ +++.++++..++ +|+++++++++ ...+++++|+|
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 58999999999999999999986 479 9999999999 999999999999 89999988764 33578999999
Q ss_pred HHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHH-HHHh-hcC--CC
Q 011650 73 EKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEK-ILMH-NSR--GI 148 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~-~l~~-~~~--g~ 148 (480)
.+++++||+||+|||||.+.++ ...+|++++.++.++|.++++++++||++||++|||++++.. ++++ .+. +.
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~---~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~ 172 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPK---DLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGE 172 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSC---CSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTT
T ss_pred HHHHhcCCEEEEecCCchhccC---CccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCC
Confidence 5679999999999999986633 112899999999999999999999999999999999999875 5634 332 56
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhcc-CCCCeEEeCCchhHHHHHHHHHHHHHHHH
Q 011650 149 NFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHW-VPEDRILCTNLWSAEVSKLAANAFLAQRI 227 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
+|.++++|||+.+|.+..++.+|++||+|++ +++.++++++|+.+ .. .+++.+++++||++|+++|+|++++|
T Consensus 173 d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~-----~~~~~~~~~ly~~~~~~-~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 173 DFALAHAPERVMVGRLLKNIREHDRIVGGID-----EASTKRAVELYSPVLTV-GQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp TBEEEECCCCCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHGGGCSS-CCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeCCccCCccchhhhhcCCcEEEEeCC-----HHHHHHHHHHHhhhccC-CeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999989999887764 77889999999998 44 57888999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHhcCCC--CCCCccccCCCCccccchhhhHHHHHHHHHHCCCc----h-hhhHHHHHH
Q 011650 228 SSVNAMSALCEATGADVSQVSHAIGFDS--RIGPKFLNASVGFGGSCFQKDILNLVYICECNGLP----E-VANYWKQVI 300 (480)
Q Consensus 228 a~~nE~~~l~~~~gid~~~v~~~~~~~~--~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~----~-~~~~~~~~~ 300 (480)
+|+||++.+|+++|+|+++|+++++++| |++.++++||+||||||||||++++++.|++.|++ + ..+++++++
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~~~ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~ 326 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLAR 326 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSCCSSSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCchhhhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccchhHHHHHHH
Confidence 9999999999999999999999999999 88889999999999999999999999999999965 1 257999999
Q ss_pred HHhhHhHHHHHHHHHHHhcC---CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhh
Q 011650 301 KVNDYQKTRFVNRVVSSMFN---TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQ 377 (480)
Q Consensus 301 ~~N~~~~~~~~~~~~~~~~~---~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~ 377 (480)
++|+.||.++++++.+.+.+ .++++||+|||+|||+||+|+||||++.|++.|.++|++|.+|||+++. +
T Consensus 327 ~iN~~~~~~~~~~i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~------~- 399 (478)
T 3g79_A 327 KVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN------Y- 399 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC------B-
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc------c-
Confidence 99999999999999988743 7899999999999999999999999999999999999999999999972 1
Q ss_pred cccCCCCCCCCCCCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcC--CCCEEEEcCCCCChHHH
Q 011650 378 MNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQ--KPAFVFDGRNILDVEKL 455 (480)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~--~~~~i~D~~~~~~~~~~ 455 (480)
+.+.++.++++++++||+|||+|+|++|+++||+.+.+.|+ .| +|||+||+++++.+
T Consensus 400 --------------------~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~-~i~D~rn~~~~~~~ 458 (478)
T 3g79_A 400 --------------------PGVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANP-VIIDGRNVIEPDEF 458 (478)
T ss_dssp --------------------TTBCEESCHHHHHTTCSEEEECSCCHHHHSCCHHHHHHHHCCSSC-EEEESSSCSCHHHH
T ss_pred --------------------cCcceecCHHHHHhcCCEEEEecCCHHHHhhhHHHHHHHhccCCC-EEEECCCCCCHHHH
Confidence 12456789999999999999999999999999999999998 56 99999999999999
Q ss_pred hhcCcEEEEecCCC
Q 011650 456 RKIGFIVYSIGKPL 469 (480)
Q Consensus 456 ~~~g~~y~~iG~~~ 469 (480)
++.||.|+||||..
T Consensus 459 ~~~g~~y~~ig~~~ 472 (478)
T 3g79_A 459 IGKGFVYKGIGREG 472 (478)
T ss_dssp HTTTCEEEETTCTT
T ss_pred HhcCCEEEEecccC
Confidence 99999999999954
No 5
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=100.00 E-value=6e-88 Score=696.61 Aligned_cols=410 Identities=26% Similarity=0.422 Sum_probs=364.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
.|.+|||+||||+++|.+|+++ ||+|++||+++++++.|+++..|++||++++++++ ...+++++|+|+ ++||
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~----~~aD 85 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTP----EASD 85 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSC----CCCS
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCch----hhCC
Confidence 3789999999999999999999 99999999999999999999999999999999865 346889999984 5899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHH-HhhcC--CCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKIL-MHNSR--GINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l-~~~~~--g~~~~v~~~Pe 157 (480)
+||+|||||.+.+. +..+|+++++++.++|.++++++++||++||++|||++++.+.+ ++.+. +.+|.++++||
T Consensus 86 vvii~VpTp~~~~~---~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 86 VFIIAVPTPNNDDQ---YRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp EEEECCCCCBCSSS---SCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred EEEEEeCCCccccc---cCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 99999999986531 14899999999999999999999999999999999999986654 43332 57899999999
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
|+.+|.+..++.+|++||+|++ +++.++++++|+.+++ ..++.+++++||++|+++|+|++++|+|+||++.+|
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~-----~~~~~~~~~ly~~~~~-~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~ 236 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVT-----KACIEAGKRVYRTFVQ-GEMIETDARTAEMSKLMENTYRDVNIALANELTKIC 236 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHTTTCC-SCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCC-----HHHHHHHHHHHHHHhC-CcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987763 7899999999999875 467789999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSS 317 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||+ ++++||+||||||||||+++|++.|++.| +++++++++|+.||.++++++.+.
T Consensus 237 e~~GiD~~~v~~~~~~~~ri--~~l~pG~G~GG~C~pkD~~~L~~~a~~~~-----~li~~~~~iN~~~~~~v~~~~~~~ 309 (431)
T 3ojo_A 237 NNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPENA-----KLIQTGREINNSMPAYVVDTTKQI 309 (431)
T ss_dssp HHTTCCHHHHHHHHTTSTTC--CCCCCCSCCCCCCBCSCC---------CC-----HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHccCCCc--ccCCCCCCccccchhhhHHHHHHHHHHHh-----HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999987 68899999999999999999999999876 699999999999999999999988
Q ss_pred hcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhC-CCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC
Q 011650 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGD-KARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST 396 (480)
Q Consensus 318 ~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~-g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+ +.+++++|+|||+|||+||+|+||||++.|++.|.++ |++|.+|||+++.+ +
T Consensus 310 l-~~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~-----~-------------------- 363 (431)
T 3ojo_A 310 I-KALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-----F-------------------- 363 (431)
T ss_dssp H-HHSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT-----T--------------------
T ss_pred h-hhcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc-----c--------------------
Confidence 7 4688999999999999999999999999999999999 99999999999753 1
Q ss_pred cCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCC
Q 011650 397 INQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPL 469 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~ 469 (480)
++.++++++++||+|||+|+|++|+++||+.+ +.|+.| +|||+||++++ +..||.|++|||-.
T Consensus 364 -----~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~-~~~~~~-~i~D~r~~~~~---~~~~~~y~~ig~~~ 426 (431)
T 3ojo_A 364 -----VEHDMSHAVKDASLVLILSDHSEFKNLSDSHF-DKMKHK-VIFDTKNVVKS---SFEDVLYYNYGNIF 426 (431)
T ss_dssp -----BCSTTHHHHTTCSEEEECSCCGGGTSCCGGGG-TTCSSC-EEEESSCCCCS---CCSSSEEEETTTGG
T ss_pred -----ccCCHHHHHhCCCEEEEecCCHHHhccCHHHH-HhCCCC-EEEECCCCCCc---hhcCeEEEeeCchh
Confidence 24578999999999999999999999999998 778877 99999999985 46899999999864
No 6
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=100.00 E-value=9.4e-86 Score=695.03 Aligned_cols=460 Identities=57% Similarity=0.997 Sum_probs=404.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|.+|+++++||+|++||+++++++.++++..+++|+++++++.....+++++++|+++++++||
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 47999999999999999999997456999999999999999999999999999988876544467999999988899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHh-hc--CCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMH-NS--RGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~-~~--~g~~~~v~~~Pe 157 (480)
+||+|||||.+.++.+.++.+|++++++++++|.++++++++||++||++||+++++.+.+++ .+ .+.+|.++++||
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe 168 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPE 168 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcc
Confidence 999999999764322223478999999999999999999999999999999999999988887 43 146788999999
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
++.+|.+.+++.+++++++|+.++.+++++.++++++|+.++...+++.++++++|++|+++|++++++++++||++.+|
T Consensus 169 ~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la 248 (481)
T 2o3j_A 169 FLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVC 248 (481)
T ss_dssp CCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988889999999874433346889999999998632467888999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSS 317 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|++++++++++++|++.++++||+||||||+|||++++.+.|++.|+++.++++++++++|++||.++++++.+.
T Consensus 249 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~~~~~l~~~~~~~N~~~~~~~~~~~~~~ 328 (481)
T 2o3j_A 249 EATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAE 328 (481)
T ss_dssp HHHSCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHccCCCCCCCCCCCCCccCCccHHHHHHHHHHHHHHcCCCccchHHHHHHHHHHhhHHHHHHHHHHh
Confidence 99999999999999999999888999999999999999999999999999998767899999999999999999999999
Q ss_pred hcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 318 ~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+++.+++++|+|||+|||+||+|+||||++.|++.|.++|++|.+|||+++.++...++.. . + +. ....
T Consensus 329 l~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~--~-~--~~------~~~~ 397 (481)
T 2o3j_A 329 LFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLAS--V-T--SA------QDVE 397 (481)
T ss_dssp TTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHH--H-S--CH------HHHH
T ss_pred hccccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHh--h-h--cc------cccc
Confidence 8777899999999999999999999999999999999999999999999986543222210 0 0 00 0000
Q ss_pred CceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCcc
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLDK 471 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~~ 471 (480)
+.+++++++++++++||+|||+|+|++|+++||+++.+.|+.|.+|||+||+++++++++.||.|+||||+.++
T Consensus 398 ~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~g~~~~~iG~~~~~ 471 (481)
T 2o3j_A 398 RLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREIGFRTFAIGTSPDQ 471 (481)
T ss_dssp HHEEEESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSCSCHHHHHHHTCEEEETTSCSCC
T ss_pred CceeecCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCCCCHHHHHhcCcEEEEecCcccc
Confidence 23678889999999999999999999999999999999999887899999999999999999999999997554
No 7
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=100.00 E-value=2.5e-83 Score=674.78 Aligned_cols=451 Identities=36% Similarity=0.590 Sum_probs=400.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|.+|+++ ||+|++||+++++++.+++++.+++++++++++.+ ...+++++++|+++++++||
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred ceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 8999999999999999999998 99999999999999999999999999999877653 33567999999988899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc-CC---CceEEeeCC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS-RG---INFQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~-~g---~~~~v~~~P 156 (480)
+||+|||||.+.++ .+|++++++++++|.++++++++|+++||++||+++.+.+.+++.. .+ .+|.++++|
T Consensus 87 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~P 161 (478)
T 2y0c_A 87 VQFIAVGTPPDEDG-----SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNP 161 (478)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEeCCCcccCC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEECh
Confidence 99999999987644 8999999999999999999999999999999999999888877641 12 678999999
Q ss_pred cccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCC-CCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 157 EFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVP-EDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~-~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|++.||.+.+++.+|+++++|+.+.....++.+.++++|+.+++ ..++..+++++||+.|+++|++++++++++||++.
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~ 241 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELAN 241 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889999998875210001788999999998752 24678899999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHH
Q 011650 236 LCEATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVV 315 (480)
Q Consensus 236 l~~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++++++++.++|++..+++||+|+||+|++||++++.+.|++.|++ .++++++.++|+.|+.++++++.
T Consensus 242 la~~~Gid~~~v~~~i~~~~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~--~pl~~~v~~in~~~~~~~~~~~~ 319 (478)
T 2y0c_A 242 LADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQS--LQILKAVSSVNATQKRVLADKIV 319 (478)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHhcCCccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999888899999999999999999999999999999 89999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCC
Q 011650 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPS 395 (480)
Q Consensus 316 ~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+++.+++++|+|||||||+||+|+||||++.|++.|.++|++|.+|||++..+ ....|+. ..|+-| .
T Consensus 320 ~~~~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~~~--~~~~~~--------~ 388 (478)
T 2y0c_A 320 ARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEE-ARRVIAL--DLADHP--------S 388 (478)
T ss_dssp HHHCSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHH-HHHHHHH--HTTTCH--------H
T ss_pred HHhcccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHH-HHHhhcc--cccccc--------c
Confidence 9987788999999999999999999999999999999999999999999998653 2222210 001111 0
Q ss_pred CcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCcccc
Q 011650 396 TINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLDKWL 473 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~~~~ 473 (480)
..+.+.+++++++++++||+|||+|+|++|+++||+.+.+.|+.+ +|||+||+++++.+++.||.|+||||+..+|-
T Consensus 389 ~~~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~ig~~~~~~~ 465 (478)
T 2y0c_A 389 WLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTP-VIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 465 (478)
T ss_dssp HHTTEEECSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSSC-EEEESSCCSCHHHHHHTTCEEECSSSCCCHHH
T ss_pred cccceeecCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCCC-EEEECCCCCCHHHHHhcCCEEEEECcccchhH
Confidence 112477889999999999999999999999999999999999887 99999999999999999999999999887774
No 8
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=100.00 E-value=1e-82 Score=670.59 Aligned_cols=459 Identities=63% Similarity=1.045 Sum_probs=403.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|+++++||+|++||+++++++.++++..+++++++++++.+....++++++|+++++++||
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 57999999999999999999987456999999999999999999999999999988775433357899999988899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC-CCceEEeeCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR-GINFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~-g~~~~v~~~Pe~~ 159 (480)
+||+|||+|.+.+++..+..+|++++.++.++|.++++++++|+++||+++++++.+.+.+++.+. +.++.+.++||++
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~ 164 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFL 164 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHh
Confidence 999999999765321112369999999999999999999999999999999999999888877543 5688999999999
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCEA 239 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~ 239 (480)
.+|.+.+++.+++++++|+..+..++++.++++++|+.+....+++.++++.||++|+++|++++++++++||++.+|++
T Consensus 165 ~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~ 244 (467)
T 2q3e_A 165 AEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEA 244 (467)
T ss_dssp CTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999983221257889999999998832247888999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHHhc
Q 011650 240 TGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSSMF 319 (480)
Q Consensus 240 ~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 319 (480)
+|+|++++++++++++|+++.+++||+||||||+|||++++++.|++.|+++..+++++++++|++|+.++++++.+.+.
T Consensus 245 ~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 324 (467)
T 2q3e_A 245 TGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLF 324 (467)
T ss_dssp HTCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCcCHHHHHHHHcCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 99999999999999999888899999999999999999999999999999877889999999999999999999999876
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
+.++++||+|||+|||+||+|+||||++.|++.|.++|++|.+|||+++.++..+.+.. ...+.| ....++
T Consensus 325 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~-------~~~~~~--~~~~~~ 395 (467)
T 2q3e_A 325 NTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSH-------PGVSED--DQVSRL 395 (467)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC---------------CHHHHH
T ss_pred cccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhcc-------cccccc--ccccCc
Confidence 67899999999999999999999999999999999999999999999987765443310 000000 011135
Q ss_pred eEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCCh--HHHhhcCcEEEEecCC
Q 011650 400 VIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDV--EKLRKIGFIVYSIGKP 468 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~--~~~~~~g~~y~~iG~~ 468 (480)
+++++++++++++||+|||+|+|++|+++||+++...|+.|.+|||+||++++ +++++.||.|+||||+
T Consensus 396 ~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~~~g~~~~~ig~~ 466 (467)
T 2q3e_A 396 VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKK 466 (467)
T ss_dssp EEECSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCTTTTCHHHHHHHTCEEEETTSC
T ss_pred eeecCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCcCCchHHHHHhcCcEEEEeCCC
Confidence 78888999999999999999999999999999999999988669999999998 8999999999999984
No 9
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=100.00 E-value=1e-76 Score=611.63 Aligned_cols=387 Identities=23% Similarity=0.379 Sum_probs=332.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|++ ||+|++||+++++++.++++..+++|+++++++.+. .+++++++|+++++++||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~-~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK-PLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS-CCCEEEESCHHHHHTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc-cCCeEEEcCHHHHHhCCC
Confidence 6899999999999999999985 799999999999999999999999999999887642 357999999988899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||||.+.+ ...+|++++++++++|.+ ++++++||++||++|||++++.+.+.+. .++|+|||+.
T Consensus 112 vViiaVPt~~~~~----~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~------~v~~sPe~~~ 180 (432)
T 3pid_A 112 YVIIATPTDYDPK----TNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID------NVIFSPEFLR 180 (432)
T ss_dssp EEEECCCCEEETT----TTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC------CEEECCCCCC
T ss_pred EEEEeCCCccccc----cccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc------cEeecCccCC
Confidence 9999999986542 236899999999999999 9999999999999999999998777542 4689999999
Q ss_pred cCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhc--cCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 161 EGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAH--WVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~--~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
||.+..++++|++||+|+. ++..+++.++|.. +....++..+++++||++||++|+|++++|+|+||++.+|+
T Consensus 181 ~G~A~~~~l~p~rIvvG~~-----~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae 255 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGER-----SARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAE 255 (432)
T ss_dssp TTSHHHHHHSCSCEEESSC-----SHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcccCCceEEecCC-----HHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886 4567888888876 22223577899999999999999999999999999999999
Q ss_pred HcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHHh
Q 011650 239 ATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSSM 318 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 318 (480)
++|+|+++|+++++++||||..|++||+||||||||||+++|++.+ .|++ .+++++++++|++||+++++++.+.
T Consensus 256 ~~GiD~~~v~~~~~~dprig~~~~~pg~G~GG~C~pkD~~~L~~~~--~~~~--~~li~~~~~~N~~~~~~v~~~i~~~- 330 (432)
T 3pid_A 256 SQGLNSKQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANY--ESVP--NNIIAAIVDANRTRKDFIADSILAR- 330 (432)
T ss_dssp HTTCCHHHHHHHHHTSTTTCSSSCCCCSCCCTTTHHHHHHHHHHHT--TTSC--CSHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HcCCCHHHHHHHHccCCCCCcccCCCCCCCcccchhhhHHHHHHHh--cCCc--hhHHHHHHHHHHhhHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999998544 5777 6899999999999999999999875
Q ss_pred cCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcC
Q 011650 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTIN 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
.+++|+|||||||+||+|+||||++.|++.|+++|++|.+|||+++.+.. .
T Consensus 331 ----~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~~-------------------------~ 381 (432)
T 3pid_A 331 ----KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDEF-------------------------F 381 (432)
T ss_dssp ----CCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSEE-------------------------T
T ss_pred ----cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhhc-------------------------C
Confidence 37899999999999999999999999999999999999999999975321 2
Q ss_pred ceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChH
Q 011650 399 QVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVE 453 (480)
Q Consensus 399 ~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~ 453 (480)
+..+++++++++++||+||+.+.|++|+++ .+. +++|++|.++
T Consensus 382 ~~~~~~~~~~~~~~aD~iv~~~~~~~~~~~-----~~~-------~~tr~~~~~~ 424 (432)
T 3pid_A 382 NSRVVRDLNAFKQEADVIISNRMAEELADV-----ADK-------VYTRDLFGND 424 (432)
T ss_dssp TEEECCCHHHHHHHCSEEECSSCCGGGGGG-----GGG-------EECCCSSTTC
T ss_pred CceEECCHHHHHhcCCEEEECCCChHHHHH-----hhc-------cCCCCCCCCc
Confidence 356788999999999999999999998763 221 4999999754
No 10
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=100.00 E-value=1.3e-75 Score=611.84 Aligned_cols=423 Identities=26% Similarity=0.406 Sum_probs=370.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.++++..+++++++++++.. ...+++++++|+++++++||
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 7999999999999999999998 99999999999999999999999999999988754 22467999999998899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCC---CcEEEEecCCCccc-HHHHHHHHHhh-cC--CCceEEe
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKS---DKIVVEKSTVPVKT-AEAIEKILMHN-SR--GINFQIL 153 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~---~~iVi~~STv~~gt-~~~l~~~l~~~-~~--g~~~~v~ 153 (480)
+||+|||+|.+.++ .+|++++++++++|.+++++ +++|+++||+++|+ .+.+.+.+++. +. +.++.+.
T Consensus 79 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~ 153 (436)
T 1mv8_A 79 VSFICVGTPSKKNG-----DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVG 153 (436)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEE
T ss_pred EEEEEcCCCcccCC-----CcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEE
Confidence 99999999986643 89999999999999999998 99999999999999 66788888764 32 3578899
Q ss_pred eCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011650 154 SNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAM 233 (480)
Q Consensus 154 ~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (480)
++||++.+|.+.+++.+++++++|+. ++++.+.++++|+.++. ++..++++.+|+.|++.|++++++++++||+
T Consensus 154 ~~Pe~~~~G~~~~~~~~~~~iv~G~~----~~~~~~~~~~l~~~~~~--~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 154 TNPEFLRESTAIKDYDFPPMTVIGEL----DKQTGDLLEEIYRELDA--PIIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTSSS--CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccccccccchhccCCCEEEEEcC----CHHHHHHHHHHHhccCC--CEEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999889999998875 47888999999999863 5666899999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHhcCCCCCC--CccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHH
Q 011650 234 SALCEATGADVSQVSHAIGFDSRIG--PKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFV 311 (480)
Q Consensus 234 ~~l~~~~gid~~~v~~~~~~~~~i~--~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~ 311 (480)
+.+|+++|+|++++.++++.++|++ +++++||+||||+|++||+.++.+.|++.|++ .+++++++++|+.||++++
T Consensus 228 ~~l~~~~Gid~~~v~~~~~~~~r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~--~pl~~~v~~in~~~~~~~~ 305 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVE--HPMLGSLMRSNSNQVQKAF 305 (436)
T ss_dssp HHHHHHTTSCHHHHHHHHTTCTTTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCC--CTTGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHhcCCCCCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCCC--cHHHHHHHHHHhHhHHHHH
Confidence 9999999999999999999999987 77889999999999999999999999999998 7899999999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHH---hhhhcccCCCCCCCC
Q 011650 312 NRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQ---RDLQMNKFDWDHPIH 388 (480)
Q Consensus 312 ~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~---~~~~~~~~~~~~~~~ 388 (480)
+++.+. ++++|+|||+|||+||+|+||||++.|++.|.++|++|.+|||+++..... +.|+.. ++
T Consensus 306 ~~~~~~-----~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~------~~- 373 (436)
T 1mv8_A 306 DLITSH-----DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIES------KI- 373 (436)
T ss_dssp HHHTTS-----SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHH------TS-
T ss_pred HHHHHh-----cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhccc------cc-
Confidence 998653 689999999999999999999999999999999999999999995432100 112100 00
Q ss_pred CCCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhhcCcEEEEecC
Q 011650 389 LQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGK 467 (480)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~ 467 (480)
.+... .+++++++++++||+|||+|+|++|+++| .+.|+.| +|||+||+++++. ||.|+||||
T Consensus 374 ------~~~~~-~~~~~~~~~~~~~d~~vi~~~~~~~~~~~----~~~~~~~-~i~D~r~~~~~~~----g~~~~~ig~ 436 (436)
T 1mv8_A 374 ------PHVSS-LLVSDLDEVVASSDVLVLGNGDELFVDLV----NKTPSGK-KLVDLVGFMPHTT----TAQAEGICW 436 (436)
T ss_dssp ------HHHHT-TBCSCHHHHHHHCSEEEECSCCGGGHHHH----HSCCTTC-EEEESSSCCSSSC----CSSEEESCC
T ss_pred ------ccccc-cccCCHHHHHhCCcEEEEeCCcHHHHhhh----HHhcCCC-EEEECCCCCCccc----CcEEEEecC
Confidence 00001 35678899999999999999999999887 4567766 9999999999764 999999996
No 11
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=100.00 E-value=5.5e-70 Score=562.99 Aligned_cols=396 Identities=22% Similarity=0.351 Sum_probs=342.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||+++|..|++ ||+|++||+++++++.++++..+++|+++++++.. ..+++++++++++++++||+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~-~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-KQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-SCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHh-ccCcEEEeCCHHHHhcCCCE
Confidence 799999999999999999986 69999999999999999999999999988887754 24578899999888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||+|.+.+ +..+|++++++++++|.+ ++++++|+++||+++|+++.+.+.+.+ + .++++||++.+
T Consensus 77 viiavpt~~~~~----~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~-----~-~v~~~Pe~~~~ 145 (402)
T 1dlj_A 77 VIIATPTNYNSR----INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT-----D-RIIFSPEFLRE 145 (402)
T ss_dssp EEECCCCCEETT----TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC-----S-CEEECCCCCCT
T ss_pred EEEecCCCcccC----CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC-----C-eEEECCccccC
Confidence 999999985321 237899999999999999 999999999999999999988766533 2 57899999999
Q ss_pred CccccccCCCCeEEEEccCCc--chHHHHHHHHHHHhc-cCCCC-eEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 162 GTAINDLFKPDRVLIGGRETP--EGMKAIKALKDVYAH-WVPED-RILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~--~~~~~~~~~~~l~~~-~~~~~-~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
|.+..++.+++++++|+.+.. ...+..+.+.++|.. ..+.. +++.++++++||.|+++|++++++++++||++.+|
T Consensus 146 G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~ 225 (402)
T 1dlj_A 146 SKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYA 225 (402)
T ss_dssp TSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888889999999986310 012556778888864 43212 47788999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSS 317 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|++++++++++++|++..++.||+||||||+|||++++++.|+ |++ .+++++++++|++||.++++++.+.
T Consensus 226 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~--~~l~~~~~~~N~~~~~~~~~~~~~~ 301 (402)
T 1dlj_A 226 ESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYSLPKDTKQLLANYN--NIP--QTLIEAIVSSNNVRKSYIAKQIINV 301 (402)
T ss_dssp HHTTCCHHHHHHHHHTSTTTCSSSCCCCSSCCSSHHHHHHHHHHHHHT--TSS--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHhccCCCCCcCCCCCCCccCCccHHhhHHHHHHHhc--CCC--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999999888999999999999999999999885 776 6899999999999999999999998
Q ss_pred hcC-CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC
Q 011650 318 MFN-TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST 396 (480)
Q Consensus 318 ~~~-~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
++. .+++++|+|||+|||+||+|+||||++.|++.|.++|++|.+|||+++... ..
T Consensus 302 ~~~~~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~--~~--------------------- 358 (402)
T 1dlj_A 302 LKEQESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE--SE--------------------- 358 (402)
T ss_dssp HTTSCCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC--TT---------------------
T ss_pred hhhcCCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH--HH---------------------
Confidence 864 678999999999999999999999999999999999999999999976431 10
Q ss_pred cCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCCh
Q 011650 397 INQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDV 452 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~ 452 (480)
.+.+++.++++++++||+||+.|+|++|+++. + -+.+|.+|.+
T Consensus 359 -~~~~~~~~~~~~~~~~d~~v~~~~h~~~~~~~-----~-------~~~~~~~~~~ 401 (402)
T 1dlj_A 359 -DQSVLVNDLENFKKQANIIVTNRYDNELQDVK-----N-------KVYSRDIFGR 401 (402)
T ss_dssp -CCSEECCCHHHHHHHCSEEECSSCCGGGGGGG-----G-------GEECCCCSSC
T ss_pred -cCCeecCCHHHHHhCCcEEEEecCChHHHHHh-----h-------ccccccccCC
Confidence 12456788999999999999999999998742 1 1458888863
No 12
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.98 E-value=2.4e-31 Score=263.51 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=201.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+++ ||+|++||+++++++.+++. +++++++++++++ ||+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~-aDv 73 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA-------------------GATLADSVADVAA-ADL 73 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT-------------------TCEECSSHHHHTT-SSE
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCEEcCCHHHHHh-CCE
Confidence 5899999999999999999998 99999999999988887752 3577889999888 999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||++ ..++++++++.+.++++++|+++||++|++++++.+.+++.+ . .++.+|....+
T Consensus 74 vi~~vp~~--------------~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g--~--~~~~~pv~g~~ 135 (296)
T 3qha_A 74 IHITVLDD--------------AQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARD--I--HIVDAPVSGGA 135 (296)
T ss_dssp EEECCSSH--------------HHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGT--C--EEEECCEESCH
T ss_pred EEEECCCh--------------HHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcC--C--EEEeCCCcCCH
Confidence 99999864 235677899999999999999999999999999888887653 2 33456655443
Q ss_pred CccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 011650 162 GTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCEATG 241 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~g 241 (480)
..+... ...+++|++ ++++++++++|+.++. .++++++++.++++|+++|.+.+.++++++|+..+|++.|
T Consensus 136 ~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G 206 (296)
T 3qha_A 136 AAAARG---ELATMVGAD-----REVYERIKPAFKHWAA-VVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG 206 (296)
T ss_dssp HHHHHT---CEEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcC---CccEEecCC-----HHHHHHHHHHHHHHcC-CeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 322211 114677875 7899999999999863 4566778999999999999999999999999999999999
Q ss_pred CCHHHH------HHHhcCCCCC-----CCcccc-CCCCccc-----cchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 242 ADVSQV------SHAIGFDSRI-----GPKFLN-ASVGFGG-----SCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 242 id~~~v------~~~~~~~~~i-----~~~~~~-pg~g~gG-----~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+|++++ .++++..+.- +.+++. .++||++ .|++||+.++.+.|++.|++ .++++.+.+
T Consensus 207 ~d~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~--~p~~~~~~~ 281 (296)
T 3qha_A 207 LDLQALGRVVRHTDALTGGPGAIMVRDNMKDLEPDNFLYQPFLHTRGLGEKDLSLALALGEAVSVD--LPLARLAYE 281 (296)
T ss_dssp CCHHHHHHHHHHHHHHHCCGGGGCCCSSCSCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred CCHHHHhhhcchHHHHhcCcccCHHhhchhhhhcCCCCCchhhhhhHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999 9988763211 222222 3678888 99999999999999999998 676665543
No 13
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.98 E-value=2.9e-31 Score=262.82 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=205.5
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+||+|||+|.||.+||.+|.++ ||+|++||+++++++.+.+. +.+.++++.++++.||
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~-------------------Ga~~a~s~~e~~~~~d 61 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred cCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCC
Confidence 77999999999999999999998 99999999999999988752 3567889999999999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHH---HHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARM---IADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~---i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++.. +.+.++++++||++||+.|.+++++.+.+++.+ ..++.+|.
T Consensus 62 vv~~~l~~~--------------~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G----~~~lDaPV 123 (300)
T 3obb_A 62 VVISMLPAS--------------QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG----LAMLDAPV 123 (300)
T ss_dssp EEEECCSCH--------------HHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCE
T ss_pred ceeecCCch--------------HHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEecCC
Confidence 999999864 234555543 677888999999999999999999999888764 34568887
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+....+ .+++||+ ++++++++++|+.+++ ..+++++.+.+..+|+++|.+.+.+++.+.|...++
T Consensus 124 sGg~~~A~~G~L---~imvGG~-----~~~~~~~~p~l~~~g~-~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la 194 (300)
T 3obb_A 124 SGGTAGAAAGTL---TFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (300)
T ss_dssp ESCHHHHHHTCE---EEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCE---EEEEeCC-----HHHHHHHHHHHHHhCC-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766544443322 4788986 8899999999999974 456788999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCCc--------------c--ccCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGPK--------------F--LNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI 300 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~~--------------~--~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
++.|+|++.+.++++....-++. . -++.++|....+.||+.+..++|++.|++ .++.+.+.
T Consensus 195 ~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~a~ 271 (300)
T 3obb_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLAL 271 (300)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 99999999999998865321110 0 12456788889999999999999999998 66666544
No 14
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.98 E-value=4.4e-31 Score=264.47 Aligned_cols=250 Identities=16% Similarity=0.119 Sum_probs=204.5
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. ++++++++++++++||
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~e~~~~aD 89 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-------------------GATIHEQARAAARDAD 89 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCEEESSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCEeeCCHHHHHhcCC
Confidence 47999999999999999999998 99999999999999988752 3567889999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHH--HHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--MIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~--~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+||+|||++. .++.++. ++.+.++++++|+++||++|.+++.+.+.+.+.+ ..++.+|..
T Consensus 90 vVi~~vp~~~--------------~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~ 151 (320)
T 4dll_A 90 IVVSMLENGA--------------VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALG----IAHLDTPVS 151 (320)
T ss_dssp EEEECCSSHH--------------HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEEECCCHH--------------HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC----CEEEeCCCc
Confidence 9999998642 3456665 7788899999999999999999999888877653 234567766
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|++ ++++++++++|+.+ . .+++.++++.++++|+++|.+.+.++++++|+..+|+
T Consensus 152 g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~-~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 221 (320)
T 4dll_A 152 GGTVGAEQG---TLVIMAGGK-----PADFERSLPLLKVF-G-RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFAT 221 (320)
T ss_dssp CHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHH-E-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CeeEEeCCC-----HHHHHHHHHHHHhc-C-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544332221 124778875 78999999999998 4 5677788999999999999999999999999999999
Q ss_pred HcCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 239 ATGADVSQVSHAIGFDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~~~i~~-------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|++++.++++.++..++ .++ .+.+||++.|++||+.++.+.+++.|++ .++.+.+.+
T Consensus 222 ~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 291 (320)
T 4dll_A 222 KGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIGFD--APITGLFEQ 291 (320)
T ss_dssp HTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999987652111 122 3468899999999999999999999998 666665543
No 15
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.98 E-value=3.4e-31 Score=264.18 Aligned_cols=251 Identities=12% Similarity=0.117 Sum_probs=204.0
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. ++++++++++++++||
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEH-------------------GASVCESPAEVIKKCK 79 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeEcCCHHHHHHhCC
Confidence 68999999999999999999998 99999999999998887752 3567889999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHH---HHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++. .+++++ +++.+.++++++|+++||++|++++++.+.+++.+ . .++.+|.
T Consensus 80 vvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g--~--~~v~~pv 141 (310)
T 3doj_A 80 YTIAMLSDPC--------------AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKG--G--RFVEGPV 141 (310)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEECCE
T ss_pred EEEEEcCCHH--------------HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcC--C--EEEeCCC
Confidence 9999998642 345666 77788899999999999999999999888887653 2 2345776
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+... ...+++|++ ++++++++++|+.++. .+++.++++.++++|+++|.+.+.++++++|+..+|
T Consensus 142 ~g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 212 (310)
T 3doj_A 142 SGSKKPAEDG---QLIILAAGD-----KALFEESIPAFDVLGK-RSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLA 212 (310)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHhcC---CeEEEEcCC-----HHHHHHHHHHHHHhCC-CEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544333221 124677875 7899999999999863 355667899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~-------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++..++ .++ .+.+||++.|+.||+.++.+.|++.|++ .++.+.+.+
T Consensus 213 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 283 (310)
T 3doj_A 213 DKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVS--MPVAAAANE 283 (310)
T ss_dssp HHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987642221 112 3467899999999999999999999998 666665544
No 16
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.97 E-value=1.1e-30 Score=258.57 Aligned_cols=249 Identities=16% Similarity=0.180 Sum_probs=196.6
Q ss_pred eEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCEE
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANIV 82 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDvV 82 (480)
||||||+|+||.+||.+|+++ ||+|++||+++++++.+.+ .+.+.++++.++++.||+|
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~-------------------~G~~~~~s~~e~~~~~dvv 65 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTK-------------------LGATVVENAIDAITPGGIV 65 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTT-------------------TTCEECSSGGGGCCTTCEE
T ss_pred cEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH-------------------cCCeEeCCHHHHHhcCCce
Confidence 899999999999999999998 9999999999998877654 2356788999989999999
Q ss_pred EEEccCCCCcCCCCCCCCCchHHHHHH-HHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccccc
Q 011650 83 FVSVNTPTKTQGLGAGKAADLTYWESA-ARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLAE 161 (480)
Q Consensus 83 ii~Vptp~~~~~~~~~~~~d~~~v~~~-~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
|+|+|++. .++++ ...+.+.++++++||++||+.|.+++++.+.+++.+ +.++.+|....+
T Consensus 66 i~~l~~~~--------------~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g----~~~ldapVsGg~ 127 (297)
T 4gbj_A 66 FSVLADDA--------------AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG----AHYVGAPIFARP 127 (297)
T ss_dssp EECCSSHH--------------HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEECCH
T ss_pred eeeccchh--------------hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC----CceecCCcCCCc
Confidence 99998652 22333 245778889999999999999999999998888764 355789988766
Q ss_pred CccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 011650 162 GTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCT-NLWSAEVSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
..+..... .+++||+ ++++++++++|+.++. ..++++ +++.++.+|+++|.+.+.+++.++|...+|++.
T Consensus 128 ~~a~~g~l---~im~gG~-----~~~~~~~~~~l~~~g~-~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~ 198 (297)
T 4gbj_A 128 EAVRAKVG---NICLSGN-----AGAKERIKPIVENFVK-GVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKN 198 (297)
T ss_dssp HHHHHTCC---EEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccc---eeecccc-----hhHHHHHHHHHHHhhC-CeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55543332 5778886 8899999999999874 345566 579999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCCCCCcc-------c--cCC-CCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 241 GADVSQVSHAIGFDSRIGPKF-------L--NAS-VGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 241 gid~~~v~~~~~~~~~i~~~~-------~--~pg-~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
|+|+++++++++..+.-++.+ . .+. +||....+.||+.+..++|++.|++ .++.+.+.+
T Consensus 199 Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~~~~ 267 (297)
T 4gbj_A 199 GISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASDVNAP--MPFADIIRN 267 (297)
T ss_dssp TCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred CCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHHhCCC--ChHHHHHHH
Confidence 999999999998765322211 1 223 4788889999999999999999998 666665443
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.97 E-value=4.2e-30 Score=253.38 Aligned_cols=252 Identities=16% Similarity=0.118 Sum_probs=204.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.|||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 59 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL-------------------GAERAATPCEVVESCP 59 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 38999999999999999999998 99999999999998887752 3567889999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHH---HHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++|+++||++|.+++++.+.+++.+ . .++.+|.
T Consensus 60 vvi~~vp~~--------------~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g--~--~~~~~pv 121 (287)
T 3pef_A 60 VTFAMLADP--------------AAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKG--G--RFLEAPV 121 (287)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhC--C--EEEECCC
Confidence 999999864 2356667 78888999999999999999999999888877653 2 2345776
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+... ...+++|++ +++.++++++|+.++. .+++.++.+.+++.|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~ 192 (287)
T 3pef_A 122 SGSKKPAEDG---TLIILAAGD-----RNLYDEAMPGFEKMGK-KIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALG 192 (287)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcC---CEEEEEeCC-----HHHHHHHHHHHHHhCC-CeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554333221 114677775 7899999999999863 456667899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKV 302 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~-------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
++.|+|++++.++++.++..++ .++ .+.+||++.|+.||..++.+.|++.|++ .++.+.+.+.
T Consensus 193 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~ 264 (287)
T 3pef_A 193 EKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQP--LVASAAANEL 264 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 9999999999999986542111 112 3467899999999999999999999998 6776665443
No 18
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.97 E-value=3.6e-30 Score=253.85 Aligned_cols=251 Identities=16% Similarity=0.149 Sum_probs=202.0
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. ++++++++++++++||
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~ad 59 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVAL-------------------GARQASSPAEVCAACD 59 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHH-------------------TCEECSCHHHHHHHCS
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHHcCC
Confidence 78999999999999999999998 99999999999998887652 3567889999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHH---HHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++|+++||+.|.+++++.+.+++.+ . .++.+|.
T Consensus 60 vvi~~v~~~--------------~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g--~--~~~~~pv 121 (287)
T 3pdu_A 60 ITIAMLADP--------------AAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARG--G--RFLEAPV 121 (287)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcC--C--EEEECCc
Confidence 999999864 2345666 77788899999999999999999999888777653 2 3345565
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+.... ..+++|++ ++..++++++|+.++. .+++.++++.+++.|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 192 (287)
T 3pdu_A 122 SGTKKPAEDGT---LIILAAGD-----QSLFTDAGPAFAALGK-KCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALG 192 (287)
T ss_dssp ECCHHHHHHTC---EEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCC---EEEEEeCC-----HHHHHHHHHHHHHhCC-CEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54432221111 14677775 7899999999999863 355667899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~-------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++..+..++ .++ .+.+||++.|+.||..++.+.|++.|++ .++.+.+.+
T Consensus 193 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~ 263 (287)
T 3pdu_A 193 RNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQP--LHGAATANE 263 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987542111 122 3467899999999999999999999998 666666544
No 19
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.97 E-value=9.2e-30 Score=252.94 Aligned_cols=251 Identities=12% Similarity=0.094 Sum_probs=199.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +...+++++++++++||+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------------------g~~~~~~~~~e~~~~aDv 67 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE------------------GACGAAASAREFAGVVDA 67 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------TCSEEESSSTTTTTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc------------------CCccccCCHHHHHhcCCE
Confidence 7899999999999999999998 99999999999999988753 112236778888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHH---HHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||++. .++.++ +++.+.++++++|+++||++|.+++.+.+.+++.+ . .++.+|..
T Consensus 68 vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g--~--~~~~~pv~ 129 (303)
T 3g0o_A 68 LVILVVNAA--------------QVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALN--L--NMLDAPVS 129 (303)
T ss_dssp EEECCSSHH--------------HHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTT--C--EEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC--C--eEEeCCCC
Confidence 999998642 245555 67788899999999999999999998888777653 2 23447765
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTN-LWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
..+..+... ...+++|++ ++..++++++|+.++. .+++.++ ++.+++.|+++|.+.++++++++|+..+|
T Consensus 130 g~~~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 200 (303)
T 3g0o_A 130 GGAVKAAQG---EMTVMASGS-----EAAFTRLKPVLDAVAS-NVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALA 200 (303)
T ss_dssp SCHHHHHTT---CEEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhcC---CeEEEeCCC-----HHHHHHHHHHHHHHCC-CEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544332211 114677764 7899999999999863 3455666 89999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~-------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.....++ .++ .+.+||+..|+.||+.++++.|++.|++ .++.+.+.+
T Consensus 201 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~~ 271 (303)
T 3g0o_A 201 ARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFP--LPLASTALN 271 (303)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987542111 112 2467899999999999999999999998 666665544
No 20
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.97 E-value=3e-29 Score=248.96 Aligned_cols=251 Identities=16% Similarity=0.149 Sum_probs=200.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 61 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred CCEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCeEcCCHHHHHhCCC
Confidence 78999999999999999999998 99999999999999888752 3567889999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHH---HHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---MIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++. .++.++. ++.+.++++++|+++||+.+.+++.+.+.+++.+ ..| +.+|.
T Consensus 62 vvi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g--~~~--~~~pv 123 (302)
T 2h78_A 62 VVISMLPASQ--------------HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LAM--LDAPV 123 (302)
T ss_dssp EEEECCSCHH--------------HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTT--CCE--EECCE
T ss_pred eEEEECCCHH--------------HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcC--CEE--EEEEc
Confidence 9999998642 3466676 7888899999999999999999988888777643 233 34565
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+... ...+++|++ ++..++++++|+.++. .+++.++.+.+++.|+++|.+...++++++|+..+|
T Consensus 124 ~~~~~~~~~g---~l~~~~~g~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~ 194 (302)
T 2h78_A 124 SGGTAGAAAG---TLTFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (302)
T ss_dssp ESCHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhhHhcC---CceEEeCCC-----HHHHHHHHHHHHHhCC-CeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4332111111 113566764 7889999999999863 456677899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCC--------------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGP--------------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~--------------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++..+..++ .++ .+.+||++.|+.||+.+++++|++.|++ .++.+.+.+
T Consensus 195 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~~ 272 (302)
T 2h78_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLALS 272 (302)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987642211 111 2347899999999999999999999998 666665443
No 21
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.2e-27 Score=239.14 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=180.5
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC-CeEEEEeCCH-------HHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEec-C
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISV-------PRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFST-D 71 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~-------~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~-d 71 (480)
+|||+|||+|+||.++|..|+++ | |+|++||+++ +..+.+.+ .+ + ++ +
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~------------------~g-~--~~~s 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAE------------------LG-V--EPLD 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHH------------------TT-C--EEES
T ss_pred CCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHH------------------CC-C--CCCC
Confidence 47899999999999999999998 9 9999999997 34444332 12 3 44 6
Q ss_pred HHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceE
Q 011650 72 VEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQ 151 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~ 151 (480)
+++++++||+||+|||++.. .+.++++.+.++++++||++||++|++++++.+.+++.+ ..|
T Consensus 81 ~~e~~~~aDvVi~avp~~~~---------------~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g--~~~- 142 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAAT---------------KAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGK--GSF- 142 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGH---------------HHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSS--CEE-
T ss_pred HHHHHhcCCEEEEecCCHHH---------------HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC--CeE-
Confidence 77888999999999986521 334588999999999999999999999999988887653 232
Q ss_pred EeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHHHHHHHHHHHHHHHHH
Q 011650 152 ILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTN-LWSAEVSKLAANAFLAQRISSV 230 (480)
Q Consensus 152 v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
+.+|....+. +..+ ...+++|+. ++ ++++++|+.++. ..++.++ ++.|+++|+++|++.+++++++
T Consensus 143 -~d~pv~g~~~-a~~g---~l~i~vgg~-----~~--~~~~~ll~~~g~-~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~ 209 (317)
T 4ezb_A 143 -VEGAVMARVP-PYAE---KVPILVAGR-----RA--VEVAERLNALGM-NLEAVGETPGQASSLKMIRSVMIKGVEALL 209 (317)
T ss_dssp -EEEEECSCST-TTGG---GSEEEEEST-----TH--HHHHHHHHTTTC-EEEEEESSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -EeccCCCCch-hhcC---CEEEEEeCC-----hH--HHHHHHHHHhCC-CeEEeCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 2334332111 1111 125788886 22 789999999863 4555665 8999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHhcCCC-CCCC-----ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHH
Q 011650 231 NAMSALCEATGADVSQVSHAIGFDS-RIGP-----KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKV 302 (480)
Q Consensus 231 nE~~~l~~~~gid~~~v~~~~~~~~-~i~~-----~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
+|+..+|+++|+|+ ++++.+.... +..+ .++ .+.+||+ ++||+.++.+.|++.|++ .++.+.+.++
T Consensus 210 ~E~~~la~~~Gid~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~ 283 (317)
T 4ezb_A 210 IEALSSAERAGVTE-RILDSVQETFPGLDWRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLN--APMSRAACET 283 (317)
T ss_dssp HHHHHHHHHTTCHH-HHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCH-HHHHHHHhcCccccHHHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 99999999999999 5666665432 2111 112 1334444 799999999999999998 6777765544
No 22
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.95 E-value=3.9e-27 Score=234.98 Aligned_cols=248 Identities=10% Similarity=0.054 Sum_probs=187.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCC--HHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS--VPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~--~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
||||+|||+|+||.++|..|+++ || +|++||++ +++.+.+.+. +++.+++++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~-------------------g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEEL-------------------GVSCKASVAEVAG 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHT-------------------TCEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHC-------------------CCEEeCCHHHHHh
Confidence 57999999999999999999998 99 99999997 5777766541 3567788988899
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||++.. .++++++.+.++++++|+++||+.|++++.+.+.+.+...|..| +.+|.
T Consensus 83 ~aDvVi~~vp~~~~---------------~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~--vd~pv 145 (312)
T 3qsg_A 83 ECDVIFSLVTAQAA---------------LEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQY--AAVAV 145 (312)
T ss_dssp HCSEEEECSCTTTH---------------HHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEE--EEEEE
T ss_pred cCCEEEEecCchhH---------------HHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeE--Eeccc
Confidence 99999999997531 34568899999999999999999999999988877765212232 33444
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTN-LWSAEVSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
...+..+ .. ...+++|+. ++ ++++++|+.++. ..++.++ ++.++++|+++|++.+.++++++|+..+
T Consensus 146 ~g~~~~~-~g---~l~i~vgg~-----~~--~~~~~ll~~~g~-~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l 213 (312)
T 3qsg_A 146 MSAVKPH-GH---RVPLVVDGD-----GA--RRFQAAFTLYGC-RIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAA 213 (312)
T ss_dssp CSCSTTT-GG---GSEEEEEST-----TH--HHHHHHHHTTTC-EEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchhh-cC---CEEEEecCC-----hH--HHHHHHHHHhCC-CeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222 11 125778876 22 889999999863 3445555 8999999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHhcCCC--C----CCCcccc--CCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHhh
Q 011650 237 CEATGADVSQVSHAIGFDS--R----IGPKFLN--ASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVND 304 (480)
Q Consensus 237 ~~~~gid~~~v~~~~~~~~--~----i~~~~~~--pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (480)
|+++|+|+ ++++.++... + ++..++. +++||. +.||+.++++.+++.|++ .++++.+.+.-+
T Consensus 214 a~~~Gld~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~~~ 283 (312)
T 3qsg_A 214 AEKMGLAD-RVLASLDASFPEHHLRDLALYLVERNLEHADR---RAHELGEVAATLCSVGVE--PLVAEAGYRRLT 283 (312)
T ss_dssp HHTTTCHH-HHHHHHHHHSGGGTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHHcCCCH-HHHHHHHhcCCchhHHHhhhHhhcCCCCcccc---hHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Confidence 99999999 6888887542 1 0111221 334443 489999999999999998 677777665443
No 23
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.94 E-value=1.3e-25 Score=223.41 Aligned_cols=246 Identities=11% Similarity=0.074 Sum_probs=185.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.++|..|+++ |++|++||+++++++.+.+. +...++++++++++||
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~e~~~~aD 67 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAA-------------------GAHLCESVKAALSASP 67 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH-------------------TCEECSSHHHHHHHSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 36899999999999999999998 99999999999998887641 2456788999899999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHH--HHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--MIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~--~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+||+|||++. .+++++. .+.. +.++++||++||+.|.+++++.+.+++.+ ..| +.+|..
T Consensus 68 vVi~~vp~~~--------------~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g--~~~--vdapv~ 128 (306)
T 3l6d_A 68 ATIFVLLDNH--------------ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAG--GHY--VKGMIV 128 (306)
T ss_dssp EEEECCSSHH--------------HHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTT--CEE--EEEEEE
T ss_pred EEEEEeCCHH--------------HHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcC--CeE--Eecccc
Confidence 9999998642 2345554 5544 46899999999999999999888777653 232 344544
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEe--CC-chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILC--TN-LWSAEVSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~--~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
..+...-.. ...+++|++ ++++++++++|+.++. .++++ ++ ++.+++.| .+.+.++++++|...
T Consensus 129 g~~~~~~~~---~~~i~~gg~-----~~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~ 195 (306)
T 3l6d_A 129 AYPRNVGHR---ESHSIHTGD-----REAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVG 195 (306)
T ss_dssp SCGGGTTCT---TCEEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred cCcccccCC---ceEEEEcCC-----HHHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHH
Confidence 322111100 114778875 7899999999999853 34555 44 78899999 345678999999999
Q ss_pred HHHHcCCCHHHHHHHhcCCC--CCCC-------ccc--cCCC-CccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 236 LCEATGADVSQVSHAIGFDS--RIGP-------KFL--NASV-GFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 236 l~~~~gid~~~v~~~~~~~~--~i~~-------~~~--~pg~-g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+|++.|+|++++.++++... ..++ .++ .+.+ +|...|+.||+.++++.+++.|++ .++.+.+.+
T Consensus 196 la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 271 (306)
T 3l6d_A 196 AGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVW--TPVFDAVCQ 271 (306)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCC--chHHHHHHH
Confidence 99999999999999987642 1111 112 2333 368899999999999999999998 677776554
No 24
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.93 E-value=8.5e-25 Score=221.42 Aligned_cols=246 Identities=15% Similarity=0.196 Sum_probs=193.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC--
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA-- 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a-- 79 (480)
|||+|||+|.||.++|.+|+++ ||+|++||+++++++.+.+. ++..+++++++++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------g~~~~~s~~e~~~~a~~ 81 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-------------------GIAGARSIEEFCAKLVK 81 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCBCCSSHHHHHHHSCS
T ss_pred CEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCEEeCCHHHHHhcCCC
Confidence 7999999999999999999998 99999999999999988763 244567888888888
Q ss_pred -CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 80 -NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 80 -DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|+||+|||++ .++++++++.+.++++++||+.||+.+.+++++.+.+.+.+ .. ++.+|..
T Consensus 82 ~DvVi~~vp~~---------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g--~~--~vdapVs 142 (358)
T 4e21_A 82 PRVVWLMVPAA---------------VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG--IT--YVDVGTS 142 (358)
T ss_dssp SCEEEECSCGG---------------GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT--CE--EEEEEEE
T ss_pred CCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC--CE--EEeCCCC
Confidence 9999999863 24677889999999999999999999999988887776653 22 2344544
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCC-------------------CCeEEeCCchhHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVP-------------------EDRILCTNLWSAEVSKLAA 219 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~v~~~~~~~ae~~Kl~~ 219 (480)
..+..+... +.+++|++ ++++++++++|+.++. ...+++++.++++++|+++
T Consensus 143 Gg~~~a~~G----~~im~GG~-----~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~ 213 (358)
T 4e21_A 143 GGIFGLERG----YCLMIGGE-----KQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVH 213 (358)
T ss_dssp CGGGHHHHC----CEEEEESC-----HHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHH
T ss_pred CCHHHHhcC----CeeeecCC-----HHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHH
Confidence 333222222 15788985 7899999999999872 1356778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHc------------------------CCCHHHHHHHhcCCCCCCCccc---------cCCC
Q 011650 220 NAFLAQRISSVNAMSALCEAT------------------------GADVSQVSHAIGFDSRIGPKFL---------NASV 266 (480)
Q Consensus 220 N~~~~~~ia~~nE~~~l~~~~------------------------gid~~~v~~~~~~~~~i~~~~~---------~pg~ 266 (480)
|.+.+.+++.++|...++++. |+|..++.+.++.+..+++.++ .|+.
T Consensus 214 n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~p~~ 293 (358)
T 4e21_A 214 NGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDSPDL 293 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhCCCh
Confidence 999999999999999999998 8999999999998764433322 2433
Q ss_pred -CccccchhhhH---HHHHHHHHHCCCchhhhHHHHHH
Q 011650 267 -GFGGSCFQKDI---LNLVYICECNGLPEVANYWKQVI 300 (480)
Q Consensus 267 -g~gG~c~~kD~---~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
.|.+. .+|. +..+..|.+.|+| ++++.+++
T Consensus 294 ~~~~~~--~~d~g~~r~~~~~A~~~gvp--~p~~~~al 327 (358)
T 4e21_A 294 QEFQGR--VSDSGEGRWTVAAAIDEGVP--AHVLSSAL 327 (358)
T ss_dssp TTC--C--CCCCSHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HHHHHH--HHhcCcHHHHHHHHHHcCCC--hHHHHHHH
Confidence 13332 3444 5678889999999 77777654
No 25
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.93 E-value=1.7e-24 Score=214.15 Aligned_cols=250 Identities=18% Similarity=0.220 Sum_probs=194.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||+++++.+.+++. ++..+++++++++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA-------------------GAETASTAKAIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEECSSHHHHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCCE
Confidence 6999999999999999999998 99999999999998887752 24567788888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHH---HHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|+|++. .++.++ +++.+.++++++|++.|+..+.+.+.+.+.+.+.+ . .++.+|..
T Consensus 65 vi~~v~~~~--------------~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g--~--~~~~~pv~ 126 (299)
T 1vpd_A 65 IITMLPNSP--------------HVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKG--V--EMLDAPVS 126 (299)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTT--C--EEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--C--eEEEecCC
Confidence 999998642 235555 57778899999999999998888888887776543 2 33455655
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|+. ++..+.++++|+.++. ..++.++.+.+.+.|++.|.+.++.+++++|+..+++
T Consensus 127 ~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~ 197 (299)
T 1vpd_A 127 GGEPKAIDG---TLSVMVGGD-----KAIFDKYYDLMKAMAG-SVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLAT 197 (299)
T ss_dssp SHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433222211 124566763 7789999999998753 3455678899999999999999999999999999999
Q ss_pred HcCCCHHHHHHHhcCCCCCC-------Cccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 239 ATGADVSQVSHAIGFDSRIG-------PKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~~~i~-------~~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|++++.+.+.....-+ +.++ ...+|+...++.||..++.+.+++.|++ .++.+.+.+
T Consensus 198 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~ 267 (299)
T 1vpd_A 198 KAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ--LPLTAAVME 267 (299)
T ss_dssp HTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 99999999999987653111 1111 1356788899999999999999999998 666665443
No 26
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.93 E-value=1.2e-24 Score=214.80 Aligned_cols=252 Identities=18% Similarity=0.158 Sum_probs=193.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++. |++|++|| ++++++.+.+. ++..+++++++++++|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D 60 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSL-------------------GAVNVETARQVTEFAD 60 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTT-------------------TCBCCSSHHHHHHTCS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHc-------------------CCcccCCHHHHHhcCC
Confidence 68999999999999999999998 99999999 98888777652 1334567888889999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHH---HHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---MIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|+|.+. .+..++. ++.+.++++++|++.|+..+.+.+.+.+.+.+.+ +.++.+|.
T Consensus 61 ~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~p~ 122 (295)
T 1yb4_A 61 IIFIMVPDTP--------------QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMG----ADYLDAPV 122 (295)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTT----EEEEECCE
T ss_pred EEEEECCCHH--------------HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEccC
Confidence 9999998642 2345555 6677788899999999888888888887776532 33346676
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+ ...+++|+. ++..+++.++|+.++. ..++.++.+.+.+.|++.|.+..+.+++++|+..++
T Consensus 123 ~~~~~~a~~g---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~ 193 (295)
T 1yb4_A 123 SGGEIGAREG---TLSIMVGGE-----QKVFDRVKPLFDILGK-NITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFA 193 (295)
T ss_dssp ESHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHcC---CeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5543222111 113566763 7788999999998863 345567889999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHHh
Q 011650 238 EATGADVSQVSHAIGFDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVN 303 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~-------~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (480)
++.|+|++++.+.+.....-++ .++ ...+|+...++.||+.++++.+++.|++ .++.+.+.+..
T Consensus 194 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~~ 266 (295)
T 1yb4_A 194 SKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKALALN--LPNTATCQELF 266 (295)
T ss_dssp HHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 9999999999999986542111 111 2346788899999999999999999998 67666665543
No 27
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.92 E-value=9.4e-24 Score=208.48 Aligned_cols=250 Identities=15% Similarity=0.177 Sum_probs=188.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|++. |++|++||+++++++.+++. +++++++++++++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDA-------------------GEQVVSSPADVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTT-------------------TCEECSSHHHHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeecCCHHHHHhcCCE
Confidence 7999999999999999999998 99999999999999888752 35567788888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHH---HHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARM---IADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~---i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||.+. .++.++.. +.+.++++++|++.|++++.+.+++.+.+.+.+ .. +..+|..
T Consensus 60 vi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g--~~--~~~~p~~ 121 (296)
T 2gf2_A 60 IITMLPTSI--------------NAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG--AV--FMDAPVS 121 (296)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CE--EEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--CE--EEEcCCC
Confidence 999998642 23455544 345678899999888999888888777666542 22 3456755
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|+. ++..+.++++|+.++. ..+..+..+.+.+.|+++|.+.++.+++++|+..+++
T Consensus 122 ~g~~~a~~~---~~~~~~~~~-----~~~~~~v~~l~~~~g~-~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~ 192 (296)
T 2gf2_A 122 GGVGAARSG---NLTFMVGGV-----EDEFAAAQELLGCMGS-NVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGI 192 (296)
T ss_dssp SHHHHHHHT---CEEEEEESC-----GGGHHHHHHHHTTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhcC---cEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432111111 113566653 6678899999998753 3455567788999999999999999999999999999
Q ss_pred HcCCCHHHHHHHhcCCCCCC---------Cccc-------cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 239 ATGADVSQVSHAIGFDSRIG---------PKFL-------NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~~~i~---------~~~~-------~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|++++.+++......+ +..+ ...+||...++.||..++.+++++.|++ .++.+.+.+
T Consensus 193 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~ 269 (296)
T 2gf2_A 193 RLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSP--ILLGSLAHQ 269 (296)
T ss_dssp HTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 99999999999887532110 0011 2235688889999999999999999998 666555443
No 28
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.92 E-value=1e-22 Score=201.45 Aligned_cols=252 Identities=16% Similarity=0.182 Sum_probs=193.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||..+|..|++. |++|++||+++++.+.+.+. ++..++++++++.++|
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D 62 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQ-------------------GAQACENNQKVAAASD 62 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCC
Confidence 37899999999999999999998 99999999999998887752 2456778888889999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHH---HHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---MIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|+|.+. .++.++. ++.+.++++++|++.|+..+++.+.+.+.+.+.+ . .++.+|.
T Consensus 63 ~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g--~--~~~~~p~ 124 (301)
T 3cky_A 63 IIFTSLPNAG--------------IVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKG--I--DYVDAPV 124 (301)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTT--C--EEEECCE
T ss_pred EEEEECCCHH--------------HHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--C--eEEEccC
Confidence 9999998642 2455564 7778899999999988888888888887776642 2 2345675
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+.. ....+++|+. ++..+.++++|+.++. ..++.++.+.+.+.|++.|.+..+.+++++|+..++
T Consensus 125 ~~~~~~a~~---g~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 195 (301)
T 3cky_A 125 SGGTKGAEA---GTLTIMVGAS-----EAVFEKIQPVLSVIGK-DIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLG 195 (301)
T ss_dssp ESHHHHHHH---TCEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHc---CCeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443311111 1113556663 7788999999998753 344567789999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHhcCCCC-------CCC-ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSR-------IGP-KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKV 302 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~-------i~~-~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
++.|+|.+++.+.+..... ..+ ..+ ...+|+...++.||..++++.+++.|++ .++.+.+.+.
T Consensus 196 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~~ 268 (301)
T 3cky_A 196 VKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVP--LPMTAMATQI 268 (301)
T ss_dssp HHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHH
Confidence 9999999999998875421 112 222 2346788889999999999999999998 6666655443
No 29
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.91 E-value=2.2e-23 Score=217.93 Aligned_cols=207 Identities=11% Similarity=0.143 Sum_probs=166.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh---
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (480)
||+|+|||+|.||.+||.+|+++ ||+|++||+++++++.+.+.... ..++..+++++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~--------------g~~i~~~~s~~e~v~~l~ 67 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK--------------GTKVVGAQSLKEMVSKLK 67 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT--------------TSSCEECSSHHHHHHTBC
T ss_pred CCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccC--------------CCceeccCCHHHHHhhcc
Confidence 58999999999999999999998 99999999999999998763210 124566788888776
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
.+|+||+|||++ ..++++++++.++++++++||+.||+.+.++.++.+.+.+.+ .. ++.+|.
T Consensus 68 ~aDvVil~Vp~~--------------~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G--i~--fvd~pV 129 (484)
T 4gwg_A 68 KPRRIILLVKAG--------------QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG--IL--FVGSGV 129 (484)
T ss_dssp SSCEEEECSCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CE--EEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc--cc--cccCCc
Confidence 599999999864 235778899999999999999999999988888777776653 22 234454
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCe-------EEeCCchhHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDR-------ILCTNLWSAEVSKLAANAFLAQRISSV 230 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~-------v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
...+..+.. .+.+++||+ ++++++++++|+.++. .. +++++.+.++.+|+++|.+.+.+++++
T Consensus 130 sGg~~gA~~----G~~im~GG~-----~ea~~~v~pll~~ig~-~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~i 199 (484)
T 4gwg_A 130 SGGEEGARY----GPSLMPGGN-----KEAWPHIKTIFQGIAA-KVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLI 199 (484)
T ss_dssp ESHHHHHHH----CCEEEEEEC-----GGGHHHHHHHHHHHSC-BCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhc----CCeeecCCC-----HHHHHHHHHHHHHhcC-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 443322221 226788985 6789999999998864 22 456778999999999999999999999
Q ss_pred HHHHHHHHH-cCCCHHHHHHHh
Q 011650 231 NAMSALCEA-TGADVSQVSHAI 251 (480)
Q Consensus 231 nE~~~l~~~-~gid~~~v~~~~ 251 (480)
+|+..++++ +|+|++++.+++
T Consensus 200 aEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 200 CEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999 999999988876
No 30
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.91 E-value=7.4e-23 Score=204.16 Aligned_cols=250 Identities=14% Similarity=0.123 Sum_probs=187.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||+++++++.+.+. ++..+++++++++++|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 89 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQE-------------------GARLGRTPAEVVSTCDI 89 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHT-------------------TCEECSCHHHHHHHCSE
T ss_pred CeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCCE
Confidence 7899999999999999999998 99999999999988877642 23556788888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHH---HhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMI---ADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i---~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||++. .++.++..+ .+.++++++|++.|++.+.+.+.+.+.+.+.+ . .++.+|..
T Consensus 90 Vi~av~~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~--~--~~v~~p~~ 151 (316)
T 2uyy_A 90 TFACVSDPK--------------AAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRG--G--RFLEAPVS 151 (316)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--C--EEEEcCcc
Confidence 999998642 234555443 36788899999999988888888877775532 2 23345543
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..... ....+++|++ ++..+.+.++|+.++. ..++.++++.+.+.|++.|.+....+++++|+..+++
T Consensus 152 g~~~~~~~---g~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~ 222 (316)
T 2uyy_A 152 GNQQLSND---GMLVILAAGD-----RGLYEDCSSCFQAMGK-TSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQ 222 (316)
T ss_dssp SCHHHHHH---TCEEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhh---CCEEEEeCCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211111 1113556764 6788999999998853 3344568899999999999999999999999999999
Q ss_pred HcCCCHHHHHHHhcCCCCCCCc-------cc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 239 ATGADVSQVSHAIGFDSRIGPK-------FL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~~~i~~~-------~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|++.+++.+++.....-++. .+ ...+|+...++.||..++++.+++.|++ .++.+.+.+
T Consensus 223 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~~ 292 (316)
T 2uyy_A 223 VTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHP--TPMAAAANE 292 (316)
T ss_dssp HTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHH
Confidence 9999999999988755321111 11 2456788889999999999999999998 666665443
No 31
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.90 E-value=3.5e-23 Score=209.57 Aligned_cols=280 Identities=13% Similarity=0.125 Sum_probs=202.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS-DQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|||+|||+|+||+++|..|+++ ||+|++||+++++++.+++ +..+.+.|+.. ...++++++|+++++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~------l~~~i~~t~d~~ea~~~a 100 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYP------FPETLKAYCDLKASLEGV 100 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCC------CCTTEEEESCHHHHHTTC
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCc------cCCCeEEECCHHHHHhcC
Confidence 37999999999999999999998 9999999999999999987 44555555542 135688999999889999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC-CCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST-VPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|+||+|||+ ..++++++++.++++++++|+..++ +.+++ +.+.+.+++..++..+.+..+|++
T Consensus 101 DvVilaVp~---------------~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~ 164 (356)
T 3k96_A 101 TDILIVVPS---------------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSL 164 (356)
T ss_dssp CEEEECCCH---------------HHHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCC
T ss_pred CEEEECCCH---------------HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccH
Confidence 999999985 2468899999999999998877664 67777 666666665433345678899998
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHH-----------------HHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSK-----------------LAANA 221 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~K-----------------l~~N~ 221 (480)
..+... ..|..+++++. +++..+.++++|+..+ ...+...|+..+||.| +..|+
T Consensus 165 a~ev~~----g~pt~~via~~----~~~~~~~v~~lf~~~~-~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~ 235 (356)
T 3k96_A 165 ATEVAA----NLPTAVSLASN----NSQFSKDLIERLHGQR-FRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNA 235 (356)
T ss_dssp HHHHHT----TCCEEEEEEES----CHHHHHHHHHHHCCSS-EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHc----CCCeEEEEecC----CHHHHHHHHHHhCCCC-eeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchH
Confidence 875432 34556777776 4788999999999754 2345568998888865 45567
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCC-------CCCCccc---cCCCCcc----------ccchhhhHHHHH
Q 011650 222 FLAQRISSVNAMSALCEATGADVSQVSHAIGFDS-------RIGPKFL---NASVGFG----------GSCFQKDILNLV 281 (480)
Q Consensus 222 ~~~~~ia~~nE~~~l~~~~gid~~~v~~~~~~~~-------~i~~~~~---~pg~g~g----------G~c~~kD~~~l~ 281 (480)
..++.+.+++|+.++|+++|+|++++.+..+... ..+.|+. .-|-|.. .--=.++...+.
T Consensus 236 ~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~ 315 (356)
T 3k96_A 236 RAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVH 315 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHH
Confidence 7888999999999999999999998876533210 0111110 0000100 011235677888
Q ss_pred HHHHHCCCchhhhHHHHHHHH--hhHhHHHHHHHHH
Q 011650 282 YICECNGLPEVANYWKQVIKV--NDYQKTRFVNRVV 315 (480)
Q Consensus 282 ~~a~~~g~~~~~~~~~~~~~~--N~~~~~~~~~~~~ 315 (480)
.+++++|++ .|+.+++.++ ++.-|...++.++
T Consensus 316 ~la~~~~v~--~Pi~~~v~~il~~~~~~~~~~~~l~ 349 (356)
T 3k96_A 316 ALAQKHAIE--MPLTFQVHRILHEDLDPQQAVQELL 349 (356)
T ss_dssp HHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHHH
Confidence 888888887 7777776543 3444555555443
No 32
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.90 E-value=9.8e-23 Score=200.30 Aligned_cols=249 Identities=16% Similarity=0.150 Sum_probs=187.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++ |++|++||+++++.+.+.+. ++..++ +++++.++|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~-~~~~~~~~D 57 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-------------------FGSEAV-PLERVAEAR 57 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-------------------HCCEEC-CGGGGGGCS
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-------------------CCcccC-HHHHHhCCC
Confidence 7899999999999999999986 68999999999998887641 112233 566688999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|+|++. .+..+++++.+.++++++|++.|+..+.+.+.+.+.+.+.+ ..++.+|....
T Consensus 58 ~vi~~v~~~~--------------~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~p~~~~ 119 (289)
T 2cvz_A 58 VIFTCLPTTR--------------EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKG----VTYLDAPVSGG 119 (289)
T ss_dssp EEEECCSSHH--------------HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTT----EEEEECCEESH
T ss_pred EEEEeCCChH--------------HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEEecCCCC
Confidence 9999998642 24567788888899999999999988888888877776532 23345564332
Q ss_pred cCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 011650 161 EGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
+..+.. ....+++|+. ++..+.++++| .++. ..+..++.+.+.+.|++.|++..+.+.+++|+..++++.
T Consensus 120 ~~~~~~---g~~~~~~~~~-----~~~~~~~~~ll-~~g~-~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~ 189 (289)
T 2cvz_A 120 TSGAEA---GTLTVMLGGP-----EEAVERVRPFL-AYAK-KVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQ 189 (289)
T ss_dssp HHHHHH---TCEEEEEESC-----HHHHHHHGGGC-TTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhh---CCeEEEECCC-----HHHHHHHHHHH-hhcC-CeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 211111 1113556653 77889999999 8752 345667889999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCC-------CCC-ccc--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHHH
Q 011650 241 GADVSQVSHAIGFDSR-------IGP-KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKV 302 (480)
Q Consensus 241 gid~~~v~~~~~~~~~-------i~~-~~~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
|+|++++.+.+..... .++ ..+ ...+|+...++.||..++.+.+++.|++ .++.+.+.+.
T Consensus 190 G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~~~ 259 (289)
T 2cvz_A 190 GVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEKAP--SPLLRLAREV 259 (289)
T ss_dssp TCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCC--CHHHHHHHHH
T ss_pred CcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 9999999999876531 111 122 2346778889999999999999999998 6666655543
No 33
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-21 Score=206.96 Aligned_cols=252 Identities=12% Similarity=0.082 Sum_probs=185.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc---
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
.+|+|||+|.||.+||.+|+++ ||+|++||+++++++.++++..+ + .+++.+++++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----~----------~gi~~~~s~~e~v~~l~~ 74 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAK----G----------KSIIGATSIEDFISKLKR 74 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTT----T----------SSEECCSSHHHHHHTSCS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHccccc----C----------CCeEEeCCHHHHHhcCCC
Confidence 4799999999999999999998 99999999999999998863211 0 247778899887776
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..++++++++.+.++++++||+.||+.+.+++++.+.+++.+ ..| +..|..
T Consensus 75 aDvVil~Vp~~--------------~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g--~~~--v~~pVs 136 (497)
T 2p4q_A 75 PRKVMLLVKAG--------------APVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKG--ILF--VGSGVS 136 (497)
T ss_dssp SCEEEECCCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEE--EEEEEE
T ss_pred CCEEEEEcCCh--------------HHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcC--Cce--eCCCcc
Confidence 99999999864 235778889999999999999999998888888877776643 232 234433
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCC------eEEeCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPED------RILCTNLWSAEVSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
..|..+. ..+.+++|+. +++.++++++|+.++. . +.+.+..+.+.++|++.|.+.+..+..++|
T Consensus 137 gg~~~a~----~G~~im~gg~-----~e~~~~v~~ll~~~g~-~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laE 206 (497)
T 2p4q_A 137 GGEEGAR----YGPSLMPGGS-----EEAWPHIKNIFQSISA-KSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICE 206 (497)
T ss_dssp SHHHHHH----HCCEEEEEEC-----GGGHHHHHHHHHHHSC-EETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHhh----cCCeEEecCC-----HHHHHHHHHHHHHhcC-ccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332221 1224777875 6788999999998864 2 344556789999999999999999999999
Q ss_pred HHHHHHH-cCCCHHHHHHHhc---CCCCCCCc-------cc--cCCCCccccchh-----hhHH-HHHHHHHHCCCchhh
Q 011650 233 MSALCEA-TGADVSQVSHAIG---FDSRIGPK-------FL--NASVGFGGSCFQ-----KDIL-NLVYICECNGLPEVA 293 (480)
Q Consensus 233 ~~~l~~~-~gid~~~v~~~~~---~~~~i~~~-------~~--~pg~g~gG~c~~-----kD~~-~l~~~a~~~g~~~~~ 293 (480)
+..++++ +|+|++++.+++. ....-++. +. .+..++-...+. ||+. .....|++.|++ .
T Consensus 207 a~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~--~ 284 (497)
T 2p4q_A 207 AYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMP--V 284 (497)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCC--C
T ss_pred HHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCC--C
Confidence 9999999 6999999998883 22110000 01 111123333444 7765 567899999998 5
Q ss_pred hHHHHH
Q 011650 294 NYWKQV 299 (480)
Q Consensus 294 ~~~~~~ 299 (480)
+++..+
T Consensus 285 P~~~~a 290 (497)
T 2p4q_A 285 TLIGEA 290 (497)
T ss_dssp HHHHHH
T ss_pred chHHHH
Confidence 665553
No 34
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.86 E-value=4.8e-20 Score=193.78 Aligned_cols=255 Identities=15% Similarity=0.113 Sum_probs=183.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc--
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSD-QLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE-- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g-~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~-- 78 (480)
|||+|||+|.||..+|..|+++ ||+|++||+++++++.+++. ... +. ..++..+++++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~---~~---------~~~i~~~~~~~e~v~~l~ 67 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASA---PF---------AGNLKAFETMEAFAASLK 67 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTS---TT---------GGGEEECSCHHHHHHHBC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCC---CC---------CCCeEEECCHHHHHhccc
Confidence 7999999999999999999998 99999999999999988752 111 10 0236788899887764
Q ss_pred -CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 79 -ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 79 -aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++.+ ..| +.+|.
T Consensus 68 ~aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g--~~~--v~~pv 129 (478)
T 1pgj_A 68 KPRKALILVQAG--------------AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAG--LRF--LGMGI 129 (478)
T ss_dssp SSCEEEECCCCS--------------HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTT--CEE--EEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCC--CeE--EEeec
Confidence 99999999864 235677888999999999999988887777777777776532 222 23343
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCC------eEEeCCchhHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPED------RILCTNLWSAEVSKLAANAFLAQRISSVN 231 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
...+..+. ..+.+++|+. ++..+.++++|+.++... +.+.++.+.+.+.|+++|.+.+..+.+++
T Consensus 130 ~gg~~~a~----~g~~i~~gg~-----~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~ 200 (478)
T 1pgj_A 130 SGGEEGAR----KGPAFFPGGT-----LSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWG 200 (478)
T ss_dssp ESHHHHHH----HCCEEEEEEC-----HHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHh----cCCeEeccCC-----HHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHH
Confidence 22221111 1124677874 778999999999886420 34556788999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHhc----CCCC------CCCccc-cCC-CC-ccccchh-----hhH-HHHHHHHHHCCCchh
Q 011650 232 AMSALCEATGADVSQVSHAIG----FDSR------IGPKFL-NAS-VG-FGGSCFQ-----KDI-LNLVYICECNGLPEV 292 (480)
Q Consensus 232 E~~~l~~~~gid~~~v~~~~~----~~~~------i~~~~~-~pg-~g-~gG~c~~-----kD~-~~l~~~a~~~g~~~~ 292 (480)
|+..+++++|++.+++.+++. .... +....+ .-. .| +-...+. ||+ ..+...|+++|++
T Consensus 201 Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~-- 278 (478)
T 1pgj_A 201 EVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVP-- 278 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCC--
Confidence 999999999999999988875 2211 000111 111 12 2222222 444 6889999999999
Q ss_pred hhHHHHH
Q 011650 293 ANYWKQV 299 (480)
Q Consensus 293 ~~~~~~~ 299 (480)
.++++++
T Consensus 279 ~Pi~~~a 285 (478)
T 1pgj_A 279 APSLNMA 285 (478)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 7777763
No 35
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.86 E-value=2e-20 Score=187.63 Aligned_cols=275 Identities=14% Similarity=0.104 Sum_probs=190.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEec--CHHHHhh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI--SVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFST--DVEKHVR 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~--d~~~a~~ 77 (480)
|||+|||+|.||.++|..|+++ ||+|++||+ ++++++.+++....... +.. . .++.+++ +++++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~-g~~------~-~~~~~~~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRL-GVK------L-NGVEIFWPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTT-TBC------C-CSEEEECGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCccc-Ccc------c-cceEEecHHhHHHHHh
Confidence 7999999999999999999998 999999999 99999999875421111 110 0 2456777 8877789
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec-CC---CcccHHHHHHHHHhhcCC-CceEE
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS-TV---PVKTAEAIEKILMHNSRG-INFQI 152 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv---~~gt~~~l~~~l~~~~~g-~~~~v 152 (480)
++|+||+|||++ .+.++++.+.+ ++++++|+..+ ++ ++++.+.+.+.+.+..++ ..+.+
T Consensus 71 ~~D~vi~~v~~~---------------~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~ 134 (335)
T 1txg_A 71 NAEVVLLGVSTD---------------GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVA 134 (335)
T ss_dssp TCSEEEECSCGG---------------GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEE
T ss_pred cCCEEEEcCChH---------------HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEE
Confidence 999999999853 24677888988 88899888776 66 778877887777653111 23455
Q ss_pred eeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHH-----------------
Q 011650 153 LSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVS----------------- 215 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~----------------- 215 (480)
..+|.....+.. ..+..+++|+. +++..+.++++|+..+. ..+...|+..++|.
T Consensus 135 ~~~p~~~~~~~~----g~~~~~~~~~~----~~~~~~~~~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~ 205 (335)
T 1txg_A 135 ITGPAIAREVAK----RMPTTVVFSSP----SESSANKMKEIFETEYF-GVEVTTDIIGTEITSALKNVYSIAIAWIRGY 205 (335)
T ss_dssp EESSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHc----cCCcEEEEEeC----CHHHHHHHHHHhCCCcE-EEEecCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667765443211 12234667765 47788999999997652 34566888888887
Q ss_pred HHH-----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHH------HHhcCCCCCCCcc-c--cCCCCcccc----------
Q 011650 216 KLA-----ANAFLAQRISSVNAMSALCEATGADVSQVS------HAIGFDSRIGPKF-L--NASVGFGGS---------- 271 (480)
Q Consensus 216 Kl~-----~N~~~~~~ia~~nE~~~l~~~~gid~~~v~------~~~~~~~~i~~~~-~--~pg~g~gG~---------- 271 (480)
|+. +|.++++.++.++|+..++++.|+|+.++. +.+.+... +.+. + ..++|+...
T Consensus 206 ~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~~~~~~~ 284 (335)
T 1txg_A 206 ESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGMLGELLGKGLSIDEAMEELERRG 284 (335)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccHHHHHHHhCCCCHHHHHHHhccCC
Confidence 555 677778899999999999999999987654 33332210 0011 0 112233211
Q ss_pred -ch---hhhHHHHHHHHHHCCCchhhhHHHHHHHHhhH--hHHHHHHHH
Q 011650 272 -CF---QKDILNLVYICECNGLPEVANYWKQVIKVNDY--QKTRFVNRV 314 (480)
Q Consensus 272 -c~---~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~ 314 (480)
+. .||..++.+++++.|++ .++.+.+.++... .|+..++.+
T Consensus 285 ~~~~E~~~~~~~~~~~a~~~gv~--~P~~~~~~~~~~~~~~~~~~~~~l 331 (335)
T 1txg_A 285 VGVVEGYKTAEKAYRLSSKINAD--TKLLDSIYRVLYEGLKVEEVLFEL 331 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred ceecchHHHHHHHHHHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHH
Confidence 33 39999999999999998 7788877665543 344444443
No 36
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.86 E-value=1.6e-20 Score=197.65 Aligned_cols=249 Identities=12% Similarity=0.104 Sum_probs=180.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh---c
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR---E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~---~ 78 (480)
|||+|||+|.||.++|..|+++ ||+|++||+++++++.++++..+ + .++..+++++++++ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----g----------~gi~~~~~~~e~v~~l~~ 66 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK----G----------TKVLGAHSLEEMVSKLKK 66 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT----T----------SSCEECSSHHHHHHHBCS
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcccc----C----------CCeEEeCCHHHHHhhccC
Confidence 7999999999999999999998 99999999999999998863211 1 13667889988764 8
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++.+ ..| +.+|..
T Consensus 67 aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g--~~~--v~~pv~ 128 (482)
T 2pgd_A 67 PRRIILLVKAG--------------QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKG--ILF--VGSGVS 128 (482)
T ss_dssp SCEEEECSCTT--------------HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEE--EEEEEE
T ss_pred CCEEEEeCCCh--------------HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC--CeE--eCCCCC
Confidence 99999999864 235777888999999999999988888777777777776543 222 344543
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCe-------EEeCCchhHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDR-------ILCTNLWSAEVSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~-------v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..+..+ ..++.+++|+. ++..+.++++|+.++. .. .+.+..+.+.+.|++.|.+.+..+.+++
T Consensus 129 g~~~~a----~~g~~i~~gg~-----~e~~~~v~~ll~~~g~-~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~ 198 (482)
T 2pgd_A 129 GGEDGA----RYGPSLMPGGN-----KEAWPHIKAIFQGIAA-KVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLIC 198 (482)
T ss_dssp SHHHHH----HHCCEEEEEEC-----TTTHHHHHHHHHHHSC-BCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhh----ccCCeEEeCCC-----HHHHHHHHHHHHHhhh-hccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 322211 12225677874 5678889999998763 22 3445678899999999999999999999
Q ss_pred HHHHHHHHc-CCCHHHHHHHhc---CCCCCCCc-------ccc---CCCCccccch------hhhHHHHHHHHHHCCCch
Q 011650 232 AMSALCEAT-GADVSQVSHAIG---FDSRIGPK-------FLN---ASVGFGGSCF------QKDILNLVYICECNGLPE 291 (480)
Q Consensus 232 E~~~l~~~~-gid~~~v~~~~~---~~~~i~~~-------~~~---pg~g~gG~c~------~kD~~~l~~~a~~~g~~~ 291 (480)
|+..++++. |++.+++.+++. ... .++. .+. +.+++-..-+ .+|...+...|+++|++
T Consensus 199 Ea~~l~~~~~G~~~~~~~~~~~~w~~g~-~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~- 276 (482)
T 2pgd_A 199 EAYHLMKDVLGLGHKEMAKAFEEWNKTE-LDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVP- 276 (482)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHhcCCC-cCchHHHHHhHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCC-
Confidence 999999999 999999998884 221 1111 011 1122211111 34556788999999998
Q ss_pred hhhHHH
Q 011650 292 VANYWK 297 (480)
Q Consensus 292 ~~~~~~ 297 (480)
.+++.
T Consensus 277 -~P~i~ 281 (482)
T 2pgd_A 277 -VTLIG 281 (482)
T ss_dssp -CHHHH
T ss_pred -cchHH
Confidence 66664
No 37
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.86 E-value=6.1e-21 Score=194.93 Aligned_cols=268 Identities=14% Similarity=0.143 Sum_probs=186.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC-------CeEEEEeCCHH-----HHHHHHcC-CCCCCCCChHHHHHHhcCCCEE
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS-------IEVAVVDISVP-----RINAWNSD-QLPIYEPGLEEVVKQCRGKNLF 67 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G-------~~V~~~D~~~~-----~v~~l~~g-~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
||||+|||+|.||.++|..|+++ | ++|++||++++ +++.+++. ....+.++.. ...++.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~i~ 92 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVP------LPHNIV 92 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCB------CCTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCccc------CcCCeE
Confidence 57999999999999999999998 8 99999999998 88888763 2333333321 123578
Q ss_pred EecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHh----hCCCCcEEEEec-CCCc--ccHHHHHHH
Q 011650 68 FSTDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIAD----VSKSDKIVVEKS-TVPV--KTAEAIEKI 140 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~----~l~~~~iVi~~S-Tv~~--gt~~~l~~~ 140 (480)
+++|+++++++||+||+|||+ ..+.++++++.+ .++++++|+..+ ++.+ ++.+.+.+.
T Consensus 93 ~~~~~~ea~~~aDvVilav~~---------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~ 157 (375)
T 1yj8_A 93 AHSDLASVINDADLLIFIVPC---------------QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNY 157 (375)
T ss_dssp EESSTHHHHTTCSEEEECCCH---------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHH
T ss_pred EECCHHHHHcCCCEEEEcCCH---------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHH
Confidence 889998888999999999984 246788889988 888899888776 4555 344455555
Q ss_pred HHhhcCCCceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHH-
Q 011650 141 LMHNSRGINFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAA- 219 (480)
Q Consensus 141 l~~~~~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~- 219 (480)
+++.. +.++.+..+|.+..+... ..+..+++++. +++..+.++++|+..+. ..+...|+..++|.|++.
T Consensus 158 l~~~~-~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~l~N 227 (375)
T 1yj8_A 158 ISDFL-NIPCSALSGANIAMDVAM----ENFSEATIGGN----DKDSLVIWQRVFDLPYF-KINCVNETIEVEICGALKN 227 (375)
T ss_dssp HHHHS-SSCEEEEECSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCSHHHHHHHHHHH
T ss_pred HHHHc-CCCEEEEeCCchHHHHHh----CCCeEEEEecC----CHHHHHHHHHHhCCCCe-EEEEeCCcHHHHHHHHHHH
Confidence 55433 234566677876543111 12234555654 46788999999997642 345567888889988765
Q ss_pred ----------------HHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHH------hc--CCCC---CCCccccCC--CCc
Q 011650 220 ----------------NAFLAQRISSVNAMSALCEAT--GADVSQVSHA------IG--FDSR---IGPKFLNAS--VGF 268 (480)
Q Consensus 220 ----------------N~~~~~~ia~~nE~~~l~~~~--gid~~~v~~~------~~--~~~~---i~~~~~~pg--~g~ 268 (480)
|.+.++.+.+++|+..++++. |+|+.++.+. +. ...+ ++..+..+| ..+
T Consensus 228 ~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~~~~~~~~~g~~~~~ 307 (375)
T 1yj8_A 228 IITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAKCSAEFIKSTPKKTW 307 (375)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHHHHHHHHhcCCCCCH
Confidence 457788999999999999999 6998766432 11 1111 111111101 111
Q ss_pred c--------ccch--hhhHHHHHHHHHHCCC--chhhhHHHHHHHHh
Q 011650 269 G--------GSCF--QKDILNLVYICECNGL--PEVANYWKQVIKVN 303 (480)
Q Consensus 269 g--------G~c~--~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N 303 (480)
. |.+. .+|..++.+++++.|+ + .|+.+.+.++.
T Consensus 308 ~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv~~~--~P~~~~v~~~~ 352 (375)
T 1yj8_A 308 EELENEILKGQKLQGTVTLKYVYHMIKEKNMTNE--FPLFTVLHKIS 352 (375)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCGGG--CHHHHHHHHHH
T ss_pred HHHHHhhcCCcEeeHHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHH
Confidence 1 4444 8999999999999999 7 77777776654
No 38
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.85 E-value=1e-20 Score=183.62 Aligned_cols=232 Identities=13% Similarity=0.127 Sum_probs=164.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI--SVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+++ ||+|+++|+ ++++++.+.+. +++ +++++++.+|
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~-------------------g~~--~~~~~~~~~a 57 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTV-------------------GVT--ETSEEDVYSC 57 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHH-------------------TCE--ECCHHHHHTS
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHC-------------------CCc--CCHHHHHhcC
Confidence 7999999999999999999998 999999999 77777766541 133 5667778999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||++.. +. .+.++.+.+++ +|++.||+.+.+.+.+.+.+.+.+ ..+..+...|...
T Consensus 58 Dvvi~~v~~~~~--------------~~-~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~ 119 (264)
T 1i36_A 58 PVVISAVTPGVA--------------LG-AARRAGRHVRG--IYVDINNISPETVRMASSLIEKGG-FVDAAIMGSVRRK 119 (264)
T ss_dssp SEEEECSCGGGH--------------HH-HHHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHH
T ss_pred CEEEEECCCHHH--------------HH-HHHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC-eeeeeeeCCcccc
Confidence 999999986421 12 23567777766 888889998888777776665421 0011222222222
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTN-LWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..| .. +++|+. +. +++++ |+.++. ..+...+ ++.+++.|++.|++....+++++|+..+++
T Consensus 120 ~~g--------~~-~~~~g~----~~---~~~~~-l~~~g~-~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~ 181 (264)
T 1i36_A 120 GAD--------IR-IIASGR----DA---EEFMK-LNRYGL-NIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAH 181 (264)
T ss_dssp GGG--------CE-EEEEST----TH---HHHHG-GGGGTC-EEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccC--------Ce-EEecCC----cH---HHhhh-HHHcCC-eeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 12 567775 22 67888 988863 2344454 899999999999999999999999999999
Q ss_pred HcCCCHHHHHHHhcCCCCCCCcc-------c--cCCCCccccchhhhHHHHHHHHHHCCCchhhhHHHHHHH
Q 011650 239 ATGADVSQVSHAIGFDSRIGPKF-------L--NASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIK 301 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~~~i~~~~-------~--~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|.+ +.+.+.... +..+ + ...+|+. +.||..++.+.+++. ++ .++.+.+.+
T Consensus 182 ~~G~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~--~p~~~~v~~ 244 (264)
T 1i36_A 182 RLGLEED-VLEMLEYTE--GNDFRESAISRLKSSCIHARR---RYEEMKEVQDMLAEV-ID--PVMPTCIIR 244 (264)
T ss_dssp HTTCHHH-HHHHHHTTS--CSSTHHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT-SC--CSHHHHHHH
T ss_pred HcCCcHH-HHHHHHHhc--CccHHHHHHHHhcCCCCcchh---hHHHHHHHHHHHHHh-cC--chHHHHHHH
Confidence 9999986 777776542 1111 1 1233333 679999999999999 88 666665544
No 39
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.85 E-value=1.5e-20 Score=197.48 Aligned_cols=251 Identities=12% Similarity=0.109 Sum_probs=183.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc---
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
|+|+|||+|.||.+||.+|+++ |++|++||+++++++.+++... + .+++.+++++++++.
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~-----~----------~gi~~~~s~~e~v~~l~~ 78 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENP-----G----------KKLVPYYTVKEFVESLET 78 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHST-----T----------SCEEECSSHHHHHHTBCS
T ss_pred CeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCC-----C----------CCeEEeCCHHHHHhCCCC
Confidence 6899999999999999999998 9999999999999998875210 0 147788899888777
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++. .++++++++.+.++++++||+.|+..+..++++.+.+++.+ ..| +.+|..
T Consensus 79 aDvVil~Vp~~~--------------~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g--~~~--v~~pv~ 140 (480)
T 2zyd_A 79 PRRILLMVKAGA--------------GTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEG--FNF--IGTGVS 140 (480)
T ss_dssp SCEEEECSCSSS--------------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEE--EEEEEE
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCC--CCe--eCCccc
Confidence 999999998642 35778889999999999999999998888777777776643 222 244543
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCC-------eEEeCCchhHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPED-------RILCTNLWSAEVSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~-------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..|..+.. .+ .+++|+. ++..+.++++|+.++. . +.+.+..+.+.+.|++.|.+.+..+..++
T Consensus 141 gg~~~a~~---g~-~i~~gg~-----~~~~~~v~~ll~~~g~-~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~la 210 (480)
T 2zyd_A 141 GGEEGALK---GP-SIMPGGQ-----KEAYELVAPILTKIAA-VAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIA 210 (480)
T ss_dssp SHHHHHHH---CC-EEEEESC-----HHHHHHHHHHHHHHSC-BCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHhHHhc---CC-eEEecCC-----HHHHHHHHHHHHHHhc-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHH
Confidence 33322211 12 4778874 7889999999998864 2 34566789999999999999999999999
Q ss_pred HHHHHHHH-cCCCHHHHHHHhc---CC---CCC----CCccc--cCCCCccccchh-----hhHH-HHHHHHHHCCCchh
Q 011650 232 AMSALCEA-TGADVSQVSHAIG---FD---SRI----GPKFL--NASVGFGGSCFQ-----KDIL-NLVYICECNGLPEV 292 (480)
Q Consensus 232 E~~~l~~~-~gid~~~v~~~~~---~~---~~i----~~~~~--~pg~g~gG~c~~-----kD~~-~l~~~a~~~g~~~~ 292 (480)
|+..++++ +|+|++++.+++. .. ..+ +..+. +++.|+...-+. ||.. .....|++.|++
T Consensus 211 Ea~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~-- 288 (480)
T 2zyd_A 211 EAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP-- 288 (480)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCC--
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCCC--
Confidence 99999999 7999999998872 12 110 00000 122223222222 3333 667889999998
Q ss_pred hhHHHHH
Q 011650 293 ANYWKQV 299 (480)
Q Consensus 293 ~~~~~~~ 299 (480)
.++...+
T Consensus 289 ~Pi~~~a 295 (480)
T 2zyd_A 289 LSLITES 295 (480)
T ss_dssp CHHHHHH
T ss_pred CchHHHH
Confidence 6666553
No 40
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.85 E-value=3.6e-21 Score=195.89 Aligned_cols=279 Identities=18% Similarity=0.169 Sum_probs=189.8
Q ss_pred eEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCC-CCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQ-LPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
||+|||+|.||.++|..|+++ ||+|++||+++++++.+++.. ...+.++.. ...++++++++++++.++|+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~aDv 88 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQ------LASNITFTSDVEKAYNGAEI 88 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCB------CCTTEEEESCHHHHHTTCSS
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccc------cccceeeeCCHHHHHcCCCE
Confidence 999999999999999999988 999999999999999887632 222222210 11357888899888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHH----HHhhCCC-CcEEEEec-CCCcccHHHHHHHHHhhcCCCceEEeeC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARM----IADVSKS-DKIVVEKS-TVPVKTAEAIEKILMHNSRGINFQILSN 155 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~----i~~~l~~-~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
||+|||+ ..+.+++++ +.+.+++ +++|+..+ ++.+++.+.+.+.+.+..++..+.+..+
T Consensus 89 Vilav~~---------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~g 153 (366)
T 1evy_A 89 ILFVIPT---------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAG 153 (366)
T ss_dssp EEECCCH---------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEES
T ss_pred EEECCCh---------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeC
Confidence 9999984 235777887 8888887 88887777 6777766556666655322123556677
Q ss_pred CcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhcc--CCCCeEEeCCchhHHHHHHHH--------------
Q 011650 156 PEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHW--VPEDRILCTNLWSAEVSKLAA-------------- 219 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~--~~~~~v~~~~~~~ae~~Kl~~-------------- 219 (480)
|.+..+... ..+..+++++. +++..+.++++|+.. +- ..+...++...+|.|++.
T Consensus 154 p~~~~~~~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~g~-~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~ 224 (366)
T 1evy_A 154 PSFAIEVAT----GVFTCVSIASA----DINVARRLQRIMSTGDRSF-VCWATTDTVGCEVASAVKNVLAIGSGVANGLG 224 (366)
T ss_dssp SCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHSCTTSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHh----CCceEEEEecC----CHHHHHHHHHHhcCCCCeE-EEEEcCCchHHHHHHHHHhHHHHHHHHHhhcc
Confidence 776542111 12223455654 467889999999986 42 344567888888887754
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc--------CCC--C---CCCccccCCCCcc------ccc--hhh
Q 011650 220 ---NAFLAQRISSVNAMSALCEATGADVSQVSHAIG--------FDS--R---IGPKFLNASVGFG------GSC--FQK 275 (480)
Q Consensus 220 ---N~~~~~~ia~~nE~~~l~~~~gid~~~v~~~~~--------~~~--~---i~~~~~~pg~g~g------G~c--~~k 275 (480)
|.+.++.+..++|+..+|++.|+|+.++.+..+ ..+ + ++..+.. |..+. +.+ ..|
T Consensus 225 ~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~e~~~ 303 (366)
T 1evy_A 225 MGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGK-GLPIEEIQRTSKAVAEGVA 303 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHT-TCCHHHHHC---CCCHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhC-CCCHHHHHHHcCCeeehHH
Confidence 556788899999999999999999865543211 011 0 0000101 11111 223 359
Q ss_pred hHHHHHHHHHHCCCchhhhHHHHHHHHhh--HhHHHHHHHHHH
Q 011650 276 DILNLVYICECNGLPEVANYWKQVIKVND--YQKTRFVNRVVS 316 (480)
Q Consensus 276 D~~~l~~~a~~~g~~~~~~~~~~~~~~N~--~~~~~~~~~~~~ 316 (480)
|..++.++++++|++ .++.+.+.++.. ..|...++.+++
T Consensus 304 ~~~~v~~~a~~~gv~--~P~~~~v~~~~~~~~~~~~~~~~l~~ 344 (366)
T 1evy_A 304 TADPLMRLAKQLKVK--MPLCHQIYEIVYKKKNPRDALADLLS 344 (366)
T ss_dssp HHHHHHHHHHHHTCC--CHHHHHHHHHHHSCCCHHHHHHHHGG
T ss_pred HHHHHHHHHHHhCCC--CcHHHHHHHHHHCCCCHHHHHHHHHc
Confidence 999999999999998 788887776544 356666665543
No 41
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.85 E-value=8e-20 Score=192.03 Aligned_cols=249 Identities=12% Similarity=0.155 Sum_probs=181.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc---
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.+.+... ..++..+++++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~---------------~~gi~~~~s~~e~v~~l~~ 68 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQ---------------DKNLVFTKTLEEFVGSLEK 68 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTT---------------TSCEEECSSHHHHHHTBCS
T ss_pred CcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCc---------------CCCeEEeCCHHHHHhhccC
Confidence 6899999999999999999998 9999999999999988875210 0147778899887776
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++. |..| +.+|..
T Consensus 69 aDvVilavp~~--------------~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~--g~~~--v~~pv~ 130 (474)
T 2iz1_A 69 PRRIMLMVQAG--------------AATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADS--GINF--IGTGVS 130 (474)
T ss_dssp SCEEEECCCTT--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTS--SCEE--EEEEEC
T ss_pred CCEEEEEccCc--------------hHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHC--CCeE--ECCCCC
Confidence 99999999864 23567788899999999999998888777777766665543 2222 344543
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCC-------eEEeCCchhHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPED-------RILCTNLWSAEVSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~-------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..+..+.. .+ .++.|+. ++..+.++++|+.++... ..+.++.+.+.+.|+++|.+.+..+..++
T Consensus 131 gg~~~a~~---g~-~i~~gg~-----~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~la 201 (474)
T 2iz1_A 131 GGEKGALL---GP-SMMPGGQ-----KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIA 201 (474)
T ss_dssp SHHHHHHH---CC-CEEEEEC-----HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhcc---CC-eEEecCC-----HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHH
Confidence 32222211 12 3667774 788999999999886420 24556789999999999999999999999
Q ss_pred HHHHHHHH-cCCCHHHHHHHhc---CCCCCCC-------c-cc--cCCCCccccchh--------hhHH-HHHHHHHHCC
Q 011650 232 AMSALCEA-TGADVSQVSHAIG---FDSRIGP-------K-FL--NASVGFGGSCFQ--------KDIL-NLVYICECNG 288 (480)
Q Consensus 232 E~~~l~~~-~gid~~~v~~~~~---~~~~i~~-------~-~~--~pg~g~gG~c~~--------kD~~-~l~~~a~~~g 288 (480)
|+..++++ +|++.+++.+++. ... .++ . +. ++.+| ...+. ||.. .....|+++|
T Consensus 202 Ea~~l~~~~~Gl~~~~~~~l~~~w~~g~-~~s~l~~~~~~~l~~~d~~~g--~~~vd~i~D~~~~k~tG~~~~~~A~~~g 278 (474)
T 2iz1_A 202 ESYDLLKRILGLSNAEIQAIFEEWNEGE-LDSYLIEITKEVLKRKDDEGE--GYIVDKILDKAGNKGTGKWTSESALDLG 278 (474)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHTTCBCSSSS--SBGGGGBCSCCCCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCC-ccccHHHhhhhHhhcCCCCCC--hhHHHHHHHhhcccchHHHHHHHHHHcC
Confidence 99999999 8999999988873 221 110 1 11 22222 13333 6665 5678899999
Q ss_pred CchhhhHHHHH
Q 011650 289 LPEVANYWKQV 299 (480)
Q Consensus 289 ~~~~~~~~~~~ 299 (480)
++ .+++..+
T Consensus 279 v~--~P~~~~a 287 (474)
T 2iz1_A 279 VP--LPLITES 287 (474)
T ss_dssp CC--CHHHHHH
T ss_pred CC--CchHHHH
Confidence 98 6666553
No 42
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.84 E-value=2.8e-20 Score=188.27 Aligned_cols=267 Identities=16% Similarity=0.158 Sum_probs=182.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCC-------CeEEEEeCCHH-----HHHHHHcCC-CCCCCCChHHHHHHhcCCCEEE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPS-------IEVAVVDISVP-----RINAWNSDQ-LPIYEPGLEEVVKQCRGKNLFF 68 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G-------~~V~~~D~~~~-----~v~~l~~g~-~~~~e~~l~~~~~~~~~~~l~~ 68 (480)
|||+|||+|.||.++|..|+++ | ++|++||++++ +.+.+++.+ ...+.++.. ...++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~ 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHK------LPPNVVA 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCC------CCTTEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCccc------CccCeEE
Confidence 7999999999999999999998 8 99999999998 888887532 222222210 0135788
Q ss_pred ecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC-CC--cccHHHHHHHHHhhc
Q 011650 69 STDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST-VP--VKTAEAIEKILMHNS 145 (480)
Q Consensus 69 t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~--~gt~~~l~~~l~~~~ 145 (480)
++|+++++++||+||+|||+. .+.++++++.++++++++|+..++ +. +++.+.+.+.+++..
T Consensus 81 ~~~~~~~~~~aD~Vilav~~~---------------~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~ 145 (354)
T 1x0v_A 81 VPDVVQAAEDADILIFVVPHQ---------------FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERL 145 (354)
T ss_dssp ESSHHHHHTTCSEEEECCCGG---------------GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHH
T ss_pred EcCHHHHHcCCCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHc
Confidence 889988889999999999842 257788899999999998887765 44 454445555554432
Q ss_pred CCCceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHH-------
Q 011650 146 RGINFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLA------- 218 (480)
Q Consensus 146 ~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~------- 218 (480)
+.++.+..+|.+..+... ..+..+++++. +++..+.++++|+..+. ..+...|+..++|.|++
T Consensus 146 -~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~ 215 (354)
T 1x0v_A 146 -GIPMSVLMGANIASEVAD----EKFCETTIGCK----DPAQGQLLKELMQTPNF-RITVVQEVDTVEICGALKNVVAVG 215 (354)
T ss_dssp -TCCEEEEECSCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCcHHHHHh----cCCceEEEEEC----CHHHHHHHHHHhCCCCE-EEEEcCCchHhHHHHHHHHHHHHH
Confidence 134566677776542110 12234556654 47788999999998642 34556788889999887
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHHH------hcC--CCC---CCCccccCCCCcc-----
Q 011650 219 ----------ANAFLAQRISSVNAMSALCEATGA---DVSQVSHA------IGF--DSR---IGPKFLNASVGFG----- 269 (480)
Q Consensus 219 ----------~N~~~~~~ia~~nE~~~l~~~~gi---d~~~v~~~------~~~--~~~---i~~~~~~pg~g~g----- 269 (480)
.|.+.++....++|+..++++.|+ +++++.+. +.+ ..+ ++..+..+|..+.
T Consensus 216 ~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (354)
T 1x0v_A 216 AGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEAFARTGKSIEQLEKE 295 (354)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcccccHHHHHHHHhcCCCHHHHHHh
Confidence 566778899999999999999999 87665321 110 011 1111111111111
Q ss_pred ---ccc--hhhhHHHHHHHHHHCCC--chhhhHHHHHHHHh
Q 011650 270 ---GSC--FQKDILNLVYICECNGL--PEVANYWKQVIKVN 303 (480)
Q Consensus 270 ---G~c--~~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N 303 (480)
|.+ ..+|..++.++++++|+ + .|+.+.+.++.
T Consensus 296 ~~~g~~~E~~~~~g~v~~~a~~~gv~~~--~P~~~~v~~~~ 334 (354)
T 1x0v_A 296 LLNGQKLQGPETARELYSILQHKGLVDK--FPLFMAVYKVC 334 (354)
T ss_dssp HSTTCCCHHHHHHHHHHHHHHHHTCGGG--SHHHHHHHHHH
T ss_pred hcCCcEeehHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHH
Confidence 333 36899999999999999 7 77777665543
No 43
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.83 E-value=1.8e-19 Score=178.70 Aligned_cols=267 Identities=13% Similarity=0.065 Sum_probs=171.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh---h
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV---R 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~---~ 77 (480)
||||+|||+|.||.++|..|+++ ||+|++||+++++++.+++........+- . ...++.++++ .+.. +
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~-----~~~~~~~~~~-~~~~~~~~ 73 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGE-E-----VVANLPIFSP-EEIDHQNE 73 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTE-E-----EEECCCEECG-GGCCTTSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCC-e-----eEecceeecc-hhhcccCC
Confidence 68999999999999999999998 99999999999999988763221110000 0 0012233332 3323 3
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
++|+||+|||++ .+.++++++.+.++++++|+..++ ..+..+.+.+.+.+... ..-....+.+
T Consensus 74 ~~d~vi~~v~~~---------------~~~~v~~~l~~~l~~~~~iv~~~~-g~~~~~~l~~~~~~~~v-i~g~~~~~~~ 136 (316)
T 2ew2_A 74 QVDLIIALTKAQ---------------QLDAMFKAIQPMITEKTYVLCLLN-GLGHEDVLEKYVPKENI-LVGITMWTAG 136 (316)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHGGGCCTTCEEEECCS-SSCTHHHHTTTSCGGGE-EEEEECCCCE
T ss_pred CCCEEEEEeccc---------------cHHHHHHHHHHhcCCCCEEEEecC-CCCcHHHHHHHcCCccE-EEEEeeeeeE
Confidence 899999999842 357788899999999998887664 33444555544433210 0001112334
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHH---------------
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAF--------------- 222 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~--------------- 222 (480)
+..|+...... . ..+.++.. ...+++..+.+.++|+..+. ..+...++..++|.|++.|+.
T Consensus 137 ~~~p~~~~~~~-~-g~~~i~~~-~~~~~~~~~~~~~ll~~~g~-~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~ 212 (316)
T 2ew2_A 137 LEGPGRVKLLG-D-GEIELENI-DPSGKKFALEVVDVFQKAGL-NPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEF 212 (316)
T ss_dssp EEETTEEEECS-C-CCEEEEES-SGGGHHHHHHHHHHHHHTTC-CEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHH
T ss_pred EcCCCEEEEec-C-CcEEEeec-CCCccHHHHHHHHHHHhCCC-CcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHH
Confidence 45555443322 1 22334432 11247788999999998763 355667899999999999963
Q ss_pred ------HHHHHHHHHHHHHHHHHcCCCH--HHHHHHhcC--C----CCCCC-ccccC-CCCccccchhhhHHHHHHHHHH
Q 011650 223 ------LAQRISSVNAMSALCEATGADV--SQVSHAIGF--D----SRIGP-KFLNA-SVGFGGSCFQKDILNLVYICEC 286 (480)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~gid~--~~v~~~~~~--~----~~i~~-~~~~p-g~g~gG~c~~kD~~~l~~~a~~ 286 (480)
+.+..+.++|+..+++++|+++ ..+.+.+.. . ++..+ ...+. ..|+-.. +.+|..++.+++++
T Consensus 213 ~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~~E-~~~~~~~~~~~a~~ 291 (316)
T 2ew2_A 213 GALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTE-IDYINGAVWRKGQK 291 (316)
T ss_dssp HTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCCCS-GGGTHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCCCcHHHHHHHHcCCcch-HHHHhhHHHHHHHH
Confidence 3677889999999999999986 345454432 1 11111 11112 3344444 78999999999999
Q ss_pred CCCchhhhHHHHHH
Q 011650 287 NGLPEVANYWKQVI 300 (480)
Q Consensus 287 ~g~~~~~~~~~~~~ 300 (480)
.|++ .++.+.+.
T Consensus 292 ~gv~--~P~~~~~~ 303 (316)
T 2ew2_A 292 YNVA--TPFCAMLT 303 (316)
T ss_dssp HTCC--CHHHHHHH
T ss_pred hCCC--CCHHHHHH
Confidence 9998 66555443
No 44
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.82 E-value=1e-19 Score=182.97 Aligned_cols=257 Identities=16% Similarity=0.191 Sum_probs=174.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|+++ ||+|++||+++++++.+++.+...++++.. .++++++++++ +.++|+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~--------~~~~~~~~~~~-~~~aDv 83 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESK--------ITVRATNDLEE-IKKEDI 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCC--------CCSEEESCGGG-CCTTEE
T ss_pred CcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCe--------eeEEEeCCHHH-hcCCCE
Confidence 7999999999999999999998 999999999999999998643211333321 14677888888 889999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec-CCCcccHHHHHHHHHhhcCCCceEEeeCCcccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS-TVPVKTAEAIEKILMHNSRGINFQILSNPEFLA 160 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
||+|||++ .+.++++++.+ ++++||..+ ++.+.+.+.+.+.+.+..+ .++.+..+|.+..
T Consensus 84 Vil~vk~~---------------~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~ 144 (335)
T 1z82_A 84 LVIAIPVQ---------------YIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAE 144 (335)
T ss_dssp EEECSCGG---------------GHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHH
T ss_pred EEEECCHH---------------HHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHH
Confidence 99999842 24566655544 678888777 5677666666666655432 3455667776654
Q ss_pred cCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHH-----------------HH
Q 011650 161 EGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANA-----------------FL 223 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~-----------------~~ 223 (480)
+... ..+..+++|+. + .+.++++|+..+. ..+...|+...+|.|++.|. ++
T Consensus 145 ~~~~----g~~~~~~~g~~-----~--~~~~~~ll~~~g~-~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~ 212 (335)
T 1z82_A 145 EVAK----KLPTAVTLAGE-----N--SKELQKRISTEYF-RVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKA 212 (335)
T ss_dssp HHHT----TCCEEEEEEET-----T--HHHHHHHHCCSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHhC----CCceEEEEEeh-----h--HHHHHHHhCCCCE-EEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHH
Confidence 3111 12224556653 2 6788999987642 34456788888888776654 44
Q ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhcC--------C--CC---CCCccccCCCCcc------ccch--hhhHHHHHH
Q 011650 224 AQRISSVNAMSALCEATGADVSQVSHAIGF--------D--SR---IGPKFLNASVGFG------GSCF--QKDILNLVY 282 (480)
Q Consensus 224 ~~~ia~~nE~~~l~~~~gid~~~v~~~~~~--------~--~~---i~~~~~~pg~g~g------G~c~--~kD~~~l~~ 282 (480)
++...+++|+..++++.|+|++++.+..+. . .+ ++..+.. |..+. |.+. .||..++.+
T Consensus 213 a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~-g~~~~~~~~~~g~~~e~~~~~~~v~~ 291 (335)
T 1z82_A 213 ALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIAR-GFNPLKLLESSNQVVEGAFTVKAVMK 291 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHH-TCCHHHHHHTCSSCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHhC-CCCHHHHHHhcCCeeeHHHHHHHHHH
Confidence 677899999999999999999877543210 1 10 1111111 11111 3333 599999999
Q ss_pred HHHHCCCchhhhHHHHHHHHh
Q 011650 283 ICECNGLPEVANYWKQVIKVN 303 (480)
Q Consensus 283 ~a~~~g~~~~~~~~~~~~~~N 303 (480)
++++.|++ .++.+.+.++.
T Consensus 292 ~a~~~gv~--~P~~~~v~~~~ 310 (335)
T 1z82_A 292 IAKENKID--MPISEEVYRVV 310 (335)
T ss_dssp HHHHTTCC--CHHHHHHHHHH
T ss_pred HHHHhCCC--CcHHHHHHHHH
Confidence 99999998 77777766544
No 45
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.76 E-value=1.2e-17 Score=166.44 Aligned_cols=207 Identities=14% Similarity=0.096 Sum_probs=139.7
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc------------CCCCCCCCChHHHHHHhcCCCEEE
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS------------DQLPIYEPGLEEVVKQCRGKNLFF 68 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~------------g~~~~~e~~l~~~~~~~~~~~l~~ 68 (480)
|+||+|||+|.||.++|..|+++ ||+|++||+++++++++.+ |..+-. ...+... +++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~-~~~~~~~-----~~i~~ 77 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGS-LSAEEQL-----SLISS 77 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSS-SCHHHHH-----HTEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccc-cchHHHh-----hceEE
Confidence 47899999999999999999998 9999999999999888753 111000 0001111 35889
Q ss_pred ecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEe-cCCCcccHHHHHHHHHhhcCC
Q 011650 69 STDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEK-STVPVKTAEAIEKILMHNSRG 147 (480)
Q Consensus 69 t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g 147 (480)
++|+++++++||+||+|||+.. .....+++++.++++++++|+.. |++++. .+++.+....
T Consensus 78 ~~~~~eav~~aDlVieavpe~~-------------~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~---~la~~~~~~~-- 139 (319)
T 2dpo_A 78 CTNLAEAVEGVVHIQECVPENL-------------DLKRKIFAQLDSIVDDRVVLSSSSSCLLPS---KLFTGLAHVK-- 139 (319)
T ss_dssp ECCHHHHTTTEEEEEECCCSCH-------------HHHHHHHHHHHTTCCSSSEEEECCSSCCHH---HHHTTCTTGG--
T ss_pred eCCHHHHHhcCCEEEEeccCCH-------------HHHHHHHHHHHhhCCCCeEEEEeCCChHHH---HHHHhcCCCC--
Confidence 9999998999999999998531 23367788999999999988643 454442 3333322111
Q ss_pred CceEEe---eCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHH
Q 011650 148 INFQIL---SNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLA 224 (480)
Q Consensus 148 ~~~~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~ 224 (480)
.| +. ++|....+ + ..+ +.+..+ ++++++++.++|+.++. .++++.....+ ++.|-
T Consensus 140 -r~-ig~Hp~~P~~~~~------l---vei-v~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~~~~~G----fi~Nr--- 197 (319)
T 2dpo_A 140 -QC-IVAHPVNPPYYIP------L---VEL-VPHPET--SPATVDRTHALMRKIGQ-SPVRVLKEIDG----FVLNR--- 197 (319)
T ss_dssp -GE-EEEEECSSTTTCC------E---EEE-EECTTC--CHHHHHHHHHHHHHTTC-EEEECSSCCTT----TTHHH---
T ss_pred -Ce-EEeecCCchhhcc------e---EEE-eCCCCC--CHHHHHHHHHHHHHcCC-EEEEECCCcCC----chHHH---
Confidence 11 11 23432221 1 124 444323 68999999999999874 45555322222 23442
Q ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCCC
Q 011650 225 QRISSVNAMSALCEATGADVSQVSHAIGFDS 255 (480)
Q Consensus 225 ~~ia~~nE~~~l~~~~gid~~~v~~~~~~~~ 255 (480)
+..++++|+..++++.++|++++.+++....
T Consensus 198 ll~a~~~EA~~l~~~g~~~~~~id~a~~~g~ 228 (319)
T 2dpo_A 198 LQYAIISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 3457899999999999999999999998663
No 46
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.76 E-value=4.6e-18 Score=163.41 Aligned_cols=198 Identities=14% Similarity=0.146 Sum_probs=130.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHH--HHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPR--INAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
.|||+|||+|.||.++|..|+++ ||+|++||+++++ .+..... .......++... .+... ++++++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~-~~~~~e~~~~ 90 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDA---MGAPPFSQWLPE--HPHVH-LAAFADVAAG 90 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC----------CCHHHHGGG--STTCE-EEEHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhh---hcchhhhHHHhh--cCcee-ccCHHHHHhc
Confidence 37999999999999999999998 9999999999987 1110000 000001111111 12233 4567788899
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHH-HhhCCCCcEEEEec-----------CCCcccHHHHHHHHHhhcC
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMI-ADVSKSDKIVVEKS-----------TVPVKTAEAIEKILMHNSR 146 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i-~~~l~~~~iVi~~S-----------Tv~~gt~~~l~~~l~~~~~ 146 (480)
||+||+|||++. +.+++.++ .+.+ ++++||+.| |+.|++...+.+.+++..+
T Consensus 91 aDvVilavp~~~---------------~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~ 154 (245)
T 3dtt_A 91 AELVVNATEGAS---------------SIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP 154 (245)
T ss_dssp CSEEEECSCGGG---------------HHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST
T ss_pred CCEEEEccCcHH---------------HHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC
Confidence 999999998532 24556667 6666 789999998 7777776666555555321
Q ss_pred CCc----eEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHH
Q 011650 147 GIN----FQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAF 222 (480)
Q Consensus 147 g~~----~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~ 222 (480)
+.. +..+.+|....+..+... +..+++++. ++++.+.++++|+.++....++.++++.+..+|+++|.+
T Consensus 155 ~~~vv~~~~~~~a~v~~~~~~a~~g---~~~~~v~g~----d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~ 227 (245)
T 3dtt_A 155 EAKVVKTLNTMNASLMVDPGRAAGG---DHSVFVSGN----DAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVW 227 (245)
T ss_dssp TSEEEECSTTSCHHHHHCGGGTGGG---CCCEEEECS----CHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHH
T ss_pred CCeEEEeecccCHHHhcCccccCCC---CeeEEEECC----CHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHH
Confidence 111 112334544443322111 223667775 488999999999998632246788999999999999999
Q ss_pred HHHHHHH
Q 011650 223 LAQRISS 229 (480)
Q Consensus 223 ~~~~ia~ 229 (480)
..+++++
T Consensus 228 ~~l~~~~ 234 (245)
T 3dtt_A 228 IRLWGAL 234 (245)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 8887654
No 47
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.74 E-value=2e-17 Score=162.41 Aligned_cols=192 Identities=22% Similarity=0.316 Sum_probs=134.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||+|||+|.||.+||.+|+ + |++|++||+++++++++.+. +. ++ ..+++++++|+++ +++||+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~---l~----~~-----~~~~i~~~~~~~~-~~~aDl 76 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQ---IP----EE-----LLSKIEFTTTLEK-VKDCDI 76 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHH---SC----GG-----GGGGEEEESSCTT-GGGCSE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHH---HH----HH-----HhCCeEEeCCHHH-HcCCCE
Confidence 68999999999999999999 8 99999999999998887653 10 00 1146888999886 899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEE-EecCCCcccHHHHHHHHHhhcC--CCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVV-EKSTVPVKTAEAIEKILMHNSR--GINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~~~~v~~~Pe~ 158 (480)
||.|||... +++ ...+.++.+. ++++++ ++||+++..... .+..... |.+| ++|..
T Consensus 77 Vieavpe~~-----------~vk--~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf---~~Pv~ 135 (293)
T 1zej_A 77 VMEAVFEDL-----------NTK--VEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHW---MNPPH 135 (293)
T ss_dssp EEECCCSCH-----------HHH--HHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEE---CSSTT
T ss_pred EEEcCcCCH-----------HHH--HHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEe---cCccc
Confidence 999998642 322 3455666665 788874 678888764322 1111110 2222 34643
Q ss_pred cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 159 LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+ +. .++ ++..+ ++++++++.++++.+++ .++++.+. |+++|.+ +++++|...+++
T Consensus 136 ~~~------lv---eiv-~g~~t--~~~~~~~~~~l~~~lGk-~~v~v~d~------fi~Nrll----~~~~~EA~~l~~ 192 (293)
T 1zej_A 136 VMP------LV---EIV-ISRFT--DSKTVAFVEGFLRELGK-EVVVCKGQ------SLVNRFN----AAVLSEASRMIE 192 (293)
T ss_dssp TCC------EE---EEE-ECTTC--CHHHHHHHHHHHHHTTC-EEEEEESS------CHHHHHH----HHHHHHHHHHHH
T ss_pred cCC------EE---EEE-CCCCC--CHHHHHHHHHHHHHcCC-eEEEeccc------ccHHHHH----HHHHHHHHHHHH
Confidence 321 11 244 44323 58999999999999874 45666553 6666643 478999999999
Q ss_pred HcCCCHHHHHHHhcCC
Q 011650 239 ATGADVSQVSHAIGFD 254 (480)
Q Consensus 239 ~~gid~~~v~~~~~~~ 254 (480)
+ |+|++++.+++...
T Consensus 193 ~-Gv~~e~id~~~~~g 207 (293)
T 1zej_A 193 E-GVRAEDVDRVWKHH 207 (293)
T ss_dssp H-TCCHHHHHHHHHTT
T ss_pred h-CCCHHHHHHHHHhc
Confidence 9 88999999999855
No 48
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.73 E-value=2.3e-16 Score=154.29 Aligned_cols=196 Identities=15% Similarity=0.170 Sum_probs=142.3
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
||||+|||+|.||..+|..|++. |+ +|++||+++++++.+++... ....++++++++.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~ 61 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI-----------------IDEGTTSIAKVEDF 61 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGGGGT
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCC-----------------cccccCCHHHHhcC
Confidence 78999999999999999999998 88 99999999999887764210 0134567777788
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||.. .+.++++++.+.++++++|++.+++.+.+.+.+.+.+.+.. ....-.++++
T Consensus 62 ~aDvVilavp~~---------------~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~--v~~~p~~~~~ 124 (281)
T 2g5c_A 62 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRF--VGGHPIAGTE 124 (281)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGE--ECEEEECCCS
T ss_pred CCCEEEEcCCHH---------------HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccc--eeeccccCCc
Confidence 999999999842 24567788888899999999888887666666776665410 0111223445
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEe-CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILC-TNLWSAEVSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~-~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
...|+.+..+++....+++... ...+++..+.++++|+.++ ..++. .+....+++|++.|....+.+++++.+..
T Consensus 125 ~~gp~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g--~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~ 200 (281)
T 2g5c_A 125 KSGVEYSLDNLYEGKKVILTPT-KKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIH 200 (281)
T ss_dssp CCSGGGCCSSTTTTCEEEECCC-SSSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCChhhhhhHHhCCCCEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566666666656554445421 1125788999999999975 34444 44566899999999988878888877765
No 49
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.73 E-value=3.1e-17 Score=172.06 Aligned_cols=210 Identities=18% Similarity=0.220 Sum_probs=142.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCC----CCCCCCC-hHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQ----LPIYEPG-LEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~----~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+|.||.++|..|+++ |++|++||+++++++++.+.. ....+.+ +...-......++++++|++ ++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-AL 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hh
Confidence 5899999999999999999998 999999999999988765310 0000011 00000000113688999986 58
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEE-EEecCCCcccHHHHHHHHHhhcC--CCceEEe
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIV-VEKSTVPVKTAEAIEKILMHNSR--GINFQIL 153 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iV-i~~STv~~gt~~~l~~~l~~~~~--g~~~~v~ 153 (480)
++||+||+|||+. +....++++++.+.+++++++ .++||+++.. ++..+..... |.+|
T Consensus 83 ~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf--- 143 (483)
T 3mog_A 83 AAADLVIEAASER-------------LEVKKALFAQLAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHF--- 143 (483)
T ss_dssp GGCSEEEECCCCC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEE---
T ss_pred cCCCEEEEcCCCc-------------HHHHHHHHHHHHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeee---
Confidence 9999999999853 122367888999999999988 5678887642 2222211110 1111
Q ss_pred eCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011650 154 SNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAM 233 (480)
Q Consensus 154 ~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (480)
++|....+ + ..++++..+ ++++.+.+.++++.+++ .++.+.+... ++++|.+ .+++||+
T Consensus 144 ~~Pa~v~~------L----vevv~g~~T--s~e~~~~~~~l~~~lGk-~~v~v~d~~G----fi~Nr~l----~~~~~Ea 202 (483)
T 3mog_A 144 FNPAPVMK------L----VEVVSGLAT--AAEVVEQLCELTLSWGK-QPVRCHSTPG----FIVNRVA----RPYYSEA 202 (483)
T ss_dssp CSSTTTCC------E----EEEEECSSC--CHHHHHHHHHHHHHTTC-EEEEEESCTT----TTHHHHT----HHHHHHH
T ss_pred cChhhhCC------e----EEEecCCCC--CHHHHHHHHHHHHHhCC-EEEEEeccCc----chHHHHH----HHHHHHH
Confidence 34432221 1 234566433 68899999999999874 4566665432 6666644 4489999
Q ss_pred HHHHHHcCCCHHHHHHHhcCC
Q 011650 234 SALCEATGADVSQVSHAIGFD 254 (480)
Q Consensus 234 ~~l~~~~gid~~~v~~~~~~~ 254 (480)
..++++.++|++++.+++...
T Consensus 203 ~~l~~~g~~~~~~id~a~~~~ 223 (483)
T 3mog_A 203 WRALEEQVAAPEVIDAALRDG 223 (483)
T ss_dssp HHHHHTTCSCHHHHHHHHHHT
T ss_pred HHHHHhCCCCHHHHHHHHHhc
Confidence 999999999999999999754
No 50
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.73 E-value=1e-16 Score=158.70 Aligned_cols=208 Identities=17% Similarity=0.194 Sum_probs=136.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH--------------hcCCCE
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ--------------CRGKNL 66 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~--------------~~~~~l 66 (480)
|+||+|||+|.||.++|..|+++ |++|++||+++++++.+++... ..++.+++. ....++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~----~~l~~~~~~g~~~~~~~~~~~~~~~~~~i 88 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIE----ESLRKVAKKKFAENPKAGDEFVEKTLSTI 88 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHH----HHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHH----HHHHHHHHcCCCCccccchhhHHHHHhce
Confidence 57899999999999999999998 9999999999998876532100 000000000 001358
Q ss_pred EEecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEE-ecCCCcccHHHHHHHHHhhc
Q 011650 67 FFSTDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVE-KSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 67 ~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~ 145 (480)
++++|+++++++||+||+|||++. .....+++++.++++++++|+. .|++++. .+.+.+....
T Consensus 89 ~~~~~~~~~~~~aD~Vi~avp~~~-------------~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~---~l~~~~~~~~ 152 (302)
T 1f0y_A 89 ATSTDAASVVHSTDLVVEAIVENL-------------KVKNELFKRLDKFAAEHTIFASNTSSLQIT---SIANATTRQD 152 (302)
T ss_dssp EEESCHHHHTTSCSEEEECCCSCH-------------HHHHHHHHHHTTTSCTTCEEEECCSSSCHH---HHHTTSSCGG
T ss_pred EEecCHHHhhcCCCEEEEcCcCcH-------------HHHHHHHHHHHhhCCCCeEEEECCCCCCHH---HHHHhcCCcc
Confidence 889999878999999999998532 2235677889888998888764 4555543 2322221111
Q ss_pred C--CCceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHH
Q 011650 146 R--GINFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFL 223 (480)
Q Consensus 146 ~--g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~ 223 (480)
. +.+| ++|.+..+. ..++++..+ +++..+.+.++|+.++. .++.+.+.. + ++++|
T Consensus 153 ~~~g~h~---~~P~~~~~~----------~~i~~g~~~--~~e~~~~~~~l~~~~G~-~~v~~~~~~-g---~i~nr--- 209 (302)
T 1f0y_A 153 RFAGLHF---FNPVPVMKL----------VEVIKTPMT--SQKTFESLVDFSKALGK-HPVSCKDTP-G---FIVNR--- 209 (302)
T ss_dssp GEEEEEE---CSSTTTCCE----------EEEECCTTC--CHHHHHHHHHHHHHTTC-EEEEECSCT-T---TTHHH---
T ss_pred cEEEEec---CCCcccCce----------EEEeCCCCC--CHHHHHHHHHHHHHcCC-ceEEecCcc-c---ccHHH---
Confidence 0 1111 234332211 123454322 58899999999999863 345554421 1 34444
Q ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhcCC
Q 011650 224 AQRISSVNAMSALCEATGADVSQVSHAIGFD 254 (480)
Q Consensus 224 ~~~ia~~nE~~~l~~~~gid~~~v~~~~~~~ 254 (480)
+.++++||...++++.++|++++..++...
T Consensus 210 -~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g 239 (302)
T 1f0y_A 210 -LLVPYLMEAIRLYERGDASKEDIDTAMKLG 239 (302)
T ss_dssp -HHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 345789999999999999999999988643
No 51
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.72 E-value=8.9e-17 Score=166.58 Aligned_cols=202 Identities=20% Similarity=0.232 Sum_probs=137.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHH--------HH-HcCCCCCCCCChHHHHHHhcCCCEEEecC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRIN--------AW-NSDQLPIYEPGLEEVVKQCRGKNLFFSTD 71 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~--------~l-~~g~~~~~e~~l~~~~~~~~~~~l~~t~d 71 (480)
|+||+|||+|.||.+||..|+++ |++|++||+++++.. ++ .+|... +...+.. ..++++++|
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~--~~~~~~~-----~~~i~~t~d 124 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLN--DKRIEKI-----NANLKITSD 124 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCC--HHHHHHH-----HTTEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCC--HHHHHHH-----hcceEEeCC
Confidence 57999999999999999999998 999999999998432 11 222111 0001111 257899999
Q ss_pred HHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEE-EecCCCcccHHHHHHHHHhhcC--CC
Q 011650 72 VEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVV-EKSTVPVKTAEAIEKILMHNSR--GI 148 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~ 148 (480)
++ ++++||+||+|||+. + .....+++++.+.++++++|+ ++||+++. .++..+..... |.
T Consensus 125 l~-al~~aDlVIeAVpe~-----------~--~vk~~v~~~l~~~~~~~aIlasnTSsl~i~---~ia~~~~~p~r~iG~ 187 (460)
T 3k6j_A 125 FH-KLSNCDLIVESVIED-----------M--KLKKELFANLENICKSTCIFGTNTSSLDLN---EISSVLRDPSNLVGI 187 (460)
T ss_dssp GG-GCTTCSEEEECCCSC-----------H--HHHHHHHHHHHTTSCTTCEEEECCSSSCHH---HHHTTSSSGGGEEEE
T ss_pred HH-HHccCCEEEEcCCCC-----------H--HHHHHHHHHHHhhCCCCCEEEecCCChhHH---HHHHhccCCcceEEE
Confidence 86 589999999999853 2 223677889999999999985 55677753 23222211110 11
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHH
Q 011650 149 NFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRIS 228 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia 228 (480)
+| ++|....+ +. .|+ .+..+ ++++++.+.++++.+++ .++.+.+. .+++.|. +.++
T Consensus 188 Hf---fnPv~~m~------Lv---EIv-~g~~T--s~e~~~~~~~l~~~lGk-~~v~v~d~-----pGfi~Nr---il~~ 243 (460)
T 3k6j_A 188 HF---FNPANVIR------LV---EII-YGSHT--SSQAIATAFQACESIKK-LPVLVGNC-----KSFVFNR---LLHV 243 (460)
T ss_dssp EC---CSSTTTCC------EE---EEE-CCSSC--CHHHHHHHHHHHHHTTC-EEEEESSC-----CHHHHHH---HHHH
T ss_pred Ee---cchhhhCC------EE---EEE-eCCCC--CHHHHHHHHHHHHHhCC-EEEEEecc-----cHHHHHH---HHHH
Confidence 22 34543221 11 244 44333 68999999999999874 56666653 2345553 3457
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHhc
Q 011650 229 SVNAMSALCEATGADVSQVSHAIG 252 (480)
Q Consensus 229 ~~nE~~~l~~~~gid~~~v~~~~~ 252 (480)
+++|+..++++.|+|+++|.+++.
T Consensus 244 ~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 244 YFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999999999999986
No 52
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.72 E-value=6.7e-16 Score=153.66 Aligned_cols=194 Identities=15% Similarity=0.174 Sum_probs=136.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHH-Hhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEK-HVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~-a~~ 77 (480)
+|||+|||+|.||.++|..|++. |+ +|++||+++++++.+.+.+. .-..++++++ +++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~-----------------~~~~~~~~~~~~~~ 93 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI-----------------IDEGTTSIAKVEDF 93 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS-----------------CSEEESCTTGGGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCC-----------------cchhcCCHHHHhhc
Confidence 37999999999999999999998 88 99999999998887664210 0145678887 799
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||.. .+.++++++.+.++++++|++.+++.+...+.+.+.+.+.- ...+-.++|+
T Consensus 94 ~aDvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~--v~~hPm~G~e 156 (314)
T 3ggo_A 94 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRF--VGGHPIAGTE 156 (314)
T ss_dssp CCSEEEECSCGG---------------GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGE--ECEEECCCCC
T ss_pred cCCEEEEeCCHH---------------HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCE--EecCcccCCc
Confidence 999999999842 24677889999999999999988887666666766654310 0011123444
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCc-hhHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNL-WSAEVSKLAANAFLAQRISSVNAM 233 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (480)
...+..+..+++....+++.. ....+++..+.++++|+.++ ..++.++. +....++++...-..+..++++.+
T Consensus 157 ~sG~~~A~~~Lf~g~~~il~~-~~~~~~~~~~~v~~l~~~~G--~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~ 230 (314)
T 3ggo_A 157 KSGVEYSLDNLYEGKKVILTP-TKKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDTL 230 (314)
T ss_dssp CCSGGGCCTTTTTTCEEEECC-CTTSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhcCCEEEEEe-CCCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556666655555532 12235889999999999986 35555554 456778887776555555665544
No 53
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.71 E-value=1.4e-16 Score=158.24 Aligned_cols=267 Identities=13% Similarity=0.099 Sum_probs=160.0
Q ss_pred CceEEEECCChhHHHHHHHHHHcC--C-C-CeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKC--P-S-IEVAVVDISVPRINAWNS-DQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~--~-G-~~V~~~D~~~~~v~~l~~-g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+|.||.++|..|+++. + | |+|++||+ +++++.+++ .+..+.++.... ...++.++++.+ .
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~-----~~~~~~~~~~~~-~ 80 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDF-----LARPTCVTDNPA-E 80 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEE-----EECCSEEESCHH-H
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCe-----EEecceEecCcc-c
Confidence 379999999999999999998740 0 5 89999999 888998886 433322110000 001345566765 4
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEee-
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILS- 154 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~- 154 (480)
+..+|+||+|||++. +.++++.+.+.++++++|+..++ ..+..+.+.+.+.+.. .-..+.+
T Consensus 81 ~~~~D~vil~vk~~~---------------~~~v~~~i~~~l~~~~~iv~~~n-G~~~~~~l~~~l~~~~--v~~g~~~~ 142 (317)
T 2qyt_A 81 VGTVDYILFCTKDYD---------------MERGVAEIRPMIGQNTKILPLLN-GADIAERMRTYLPDTV--VWKGCVYI 142 (317)
T ss_dssp HCCEEEEEECCSSSC---------------HHHHHHHHGGGEEEEEEEEECSC-SSSHHHHHTTTSCTTT--BCEEEEEE
T ss_pred cCCCCEEEEecCccc---------------HHHHHHHHHhhcCCCCEEEEccC-CCCcHHHHHHHCCCCc--EEEEEEEE
Confidence 789999999998642 36778889988888888876543 4455455544443211 0011222
Q ss_pred CCcccccCccccccCCCCeEEEEcc-CCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHH----------
Q 011650 155 NPEFLAEGTAINDLFKPDRVLIGGR-ETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFL---------- 223 (480)
Q Consensus 155 ~Pe~~~~G~a~~~~~~~~~vviG~~-~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~---------- 223 (480)
...+..||...+.. ....+++|+. +.. +.+.. .+.++|+..+. ..++..++..++|.|++.|+..
T Consensus 143 ~a~~~~pg~~~~~~-~g~~~~ig~~~~~~-~~~~~-~~~~ll~~~g~-~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~ 218 (317)
T 2qyt_A 143 SARKSAPGLITLEA-DRELFYFGSGLPEQ-TDDEV-RLAELLTAAGI-RAYNPTDIDWYIMKKFMMISVTATATAYFDKP 218 (317)
T ss_dssp EEEEEETTEEEEEE-EEEEEEEECCSSSC-CHHHH-HHHHHHHHTTC-CEECCSCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred EEEEcCCCEEEEcC-CCceEEEcCCCCCC-cCHHH-HHHHHHHHCCC-CCEEchHHHHHHHHHHHHHHhhHHHHHHHCCC
Confidence 22233445432211 1112336753 221 24556 88899998753 3455689999999999999853
Q ss_pred ---------HHHHHHHHHHHHHHHHcCCCHH--HHHHHhcC----CCC-CCCccccCCCCccccchhhhHHHHHHHHHHC
Q 011650 224 ---------AQRISSVNAMSALCEATGADVS--QVSHAIGF----DSR-IGPKFLNASVGFGGSCFQKDILNLVYICECN 287 (480)
Q Consensus 224 ---------~~~ia~~nE~~~l~~~~gid~~--~v~~~~~~----~~~-i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~ 287 (480)
.+....++|+..++++.|+++. .+.+.+.. .++ ..++..+...|.-. -+.....++.++|+++
T Consensus 219 ~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~g~~~-E~~~~~g~~~~~a~~~ 297 (317)
T 2qyt_A 219 IGSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQRKMPPESTSSMHSDFLQGGST-EVETLTGYVVREAEAL 297 (317)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC---------------------CTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccCCCCCChHHHHHHcCCcc-CHHHHhhHHHHHHHHc
Confidence 5677899999999999999863 34443321 111 11111111112110 0112256888999999
Q ss_pred CCchhhhHHHHH
Q 011650 288 GLPEVANYWKQV 299 (480)
Q Consensus 288 g~~~~~~~~~~~ 299 (480)
|++ .|+.+.+
T Consensus 298 gv~--~P~~~~~ 307 (317)
T 2qyt_A 298 RVD--LPMYKRM 307 (317)
T ss_dssp TCC--CHHHHHH
T ss_pred CCC--CCHHHHH
Confidence 998 6655544
No 54
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.71 E-value=2.9e-17 Score=160.93 Aligned_cols=254 Identities=14% Similarity=0.105 Sum_probs=159.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.++.... .+. .+ ...+. +++. ++++++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~----~~~-~~-----~~~~~-~~~~-~~~~~~d~ 66 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVET----DGS-IF-----NESLT-ANDP-DFLATSDL 66 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECT----TSC-EE-----EEEEE-ESCH-HHHHTCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcC----CCc-ee-----eeeee-ecCc-cccCCCCE
Confidence 7999999999999999999998 9999999999876554432110 000 00 00122 3454 45789999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCc--eEEeeCCccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGIN--FQILSNPEFL 159 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~--~~v~~~Pe~~ 159 (480)
||+|||++ .+.++++++.+.++++++|+..++ ..++.+.+.+.+.+.-.|.. .....+| .
T Consensus 67 vi~~v~~~---------------~~~~v~~~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~- 128 (291)
T 1ks9_A 67 LLVTLKAW---------------QVSDAVKSLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGN-V- 128 (291)
T ss_dssp EEECSCGG---------------GHHHHHHHHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETT-E-
T ss_pred EEEEecHH---------------hHHHHHHHHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCC-E-
Confidence 99999853 147788899999998888877644 44554444333322000000 0012234 2
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHH----------------
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFL---------------- 223 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~---------------- 223 (480)
. ...... ++.+|.... +++..+.++++|+..+. ..++..++..+.|.|++.|+..
T Consensus 129 ----~-~~~~~g-~~~i~~~~~--~~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~ 199 (291)
T 1ks9_A 129 ----I-IHVANG-ITHIGPARQ--QDGDYSYLADILQTVLP-DVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRH 199 (291)
T ss_dssp ----E-EEEECC-CEEEEESSG--GGTTCTHHHHHHHTTSS-CEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGG
T ss_pred ----E-EEeccc-ceEEccCCC--CcchHHHHHHHHHhcCC-CCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHh
Confidence 1 111122 244554211 34567788999998763 3456679999999999999877
Q ss_pred --HHHHHHHHHHHHHHHHcCCCH--HHH----HHHhcCCC-CCCCccccCCCCccccchhhhHHHHHHHHHHCCCchhhh
Q 011650 224 --AQRISSVNAMSALCEATGADV--SQV----SHAIGFDS-RIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAN 294 (480)
Q Consensus 224 --~~~ia~~nE~~~l~~~~gid~--~~v----~~~~~~~~-~i~~~~~~pg~g~gG~c~~kD~~~l~~~a~~~g~~~~~~ 294 (480)
.+....++|+..++++.|++. .++ .+.+...+ ..++++.+...|... -+..+..++.++++++|++ .|
T Consensus 200 ~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d~~~g~~~-e~~~~~g~~~~~a~~~gv~--~P 276 (291)
T 1ks9_A 200 HPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHT-EIDYINGFLLRRARAHGIA--VP 276 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHHHHTTCCC-SGGGTHHHHHHHHHHHTCC--CH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHHHHcCCcc-HHHHHHHHHHHHHHHhCCC--CC
Confidence 788899999999999999986 444 33333221 111222111122111 2346788999999999998 66
Q ss_pred HHHHH
Q 011650 295 YWKQV 299 (480)
Q Consensus 295 ~~~~~ 299 (480)
+.+.+
T Consensus 277 ~~~~~ 281 (291)
T 1ks9_A 277 ENTRL 281 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 55
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.70 E-value=1.3e-15 Score=149.49 Aligned_cols=206 Identities=14% Similarity=0.184 Sum_probs=139.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCC-----------CCCCCCChHHHHHHhcCCCEEEec
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQ-----------LPIYEPGLEEVVKQCRGKNLFFST 70 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~-----------~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
+||+|||+|.||.++|..|+.+ |++|++||+++++++++.+.. ..+.....+... .++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~-----~~i~~~~ 77 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKAL-----GGIRYSD 77 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHH-----HHCEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHH-----cCeEEeC
Confidence 5899999999999999999998 999999999999888766420 001111111111 2467889
Q ss_pred CHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEE-ecCCCcccHHHHHHHHHhhcC--C
Q 011650 71 DVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVE-KSTVPVKTAEAIEKILMHNSR--G 147 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~--g 147 (480)
++++++++||+||+|||+. ......+++++.+.++++++++. .|++++ ..+.+.+..... |
T Consensus 78 ~~~~~~~~aDlVi~av~~~-------------~~~~~~v~~~l~~~~~~~~il~s~tS~~~~---~~la~~~~~~~~~ig 141 (283)
T 4e12_A 78 DLAQAVKDADLVIEAVPES-------------LDLKRDIYTKLGELAPAKTIFATNSSTLLP---SDLVGYTGRGDKFLA 141 (283)
T ss_dssp CHHHHTTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHHHHHSCGGGEEE
T ss_pred CHHHHhccCCEEEEeccCc-------------HHHHHHHHHHHHhhCCCCcEEEECCCCCCH---HHHHhhcCCCcceEE
Confidence 9998889999999999853 22346778889999999998874 455553 334444432211 1
Q ss_pred CceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeC-CchhHHHHHHHHHHHHHHH
Q 011650 148 INFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCT-NLWSAEVSKLAANAFLAQR 226 (480)
Q Consensus 148 ~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~~N~~~~~~ 226 (480)
.+| ++|....+. ..++++..+ +++..+.+.++++.++. .++.+. +.. .++.|. +.
T Consensus 142 ~h~---~~p~~~~~l----------vevv~~~~t--~~~~~~~~~~l~~~~g~-~~v~v~~~~~-----g~i~nr---~~ 197 (283)
T 4e12_A 142 LHF---ANHVWVNNT----------AEVMGTTKT--DPEVYQQVVEFASAIGM-VPIELKKEKA-----GYVLNS---LL 197 (283)
T ss_dssp EEE---CSSTTTSCE----------EEEEECTTS--CHHHHHHHHHHHHHTTC-EEEECSSCCT-----TTTHHH---HH
T ss_pred Ecc---CCCcccCce----------EEEEeCCCC--CHHHHHHHHHHHHHcCC-EEEEEecCCC-----CEEehH---HH
Confidence 111 344332221 123455333 68899999999999874 455542 221 123442 34
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhcCC
Q 011650 227 ISSVNAMSALCEATGADVSQVSHAIGFD 254 (480)
Q Consensus 227 ia~~nE~~~l~~~~gid~~~v~~~~~~~ 254 (480)
.++++|...++++.++|++++.+++...
T Consensus 198 ~~~~~ea~~l~~~g~~~~~~id~~~~~~ 225 (283)
T 4e12_A 198 VPLLDAAAELLVDGIADPETIDKTWRIG 225 (283)
T ss_dssp HHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHhc
Confidence 5789999999999999999999998754
No 56
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.69 E-value=2.9e-16 Score=158.67 Aligned_cols=294 Identities=17% Similarity=0.185 Sum_probs=175.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHHHhcCCCE-EEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSD-QLPIYEPGLEEVVKQCRGKNL-FFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g-~~~~~e~~l~~~~~~~~~~~l-~~t~d~~~a~~~a 79 (480)
|||+|||+|.||..+|..|+++ |++|++||+++++++.+++. ...+.+.+.+. ..++ .+++++++++.++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG------TAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCE------EECCSEEESCHHHHHTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEecccccc------ccccceecCCHHHHHhcC
Confidence 6899999999999999999998 99999999999999988753 22221111100 0122 4678888888999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC-CCceE-EeeCCc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR-GINFQ-ILSNPE 157 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~-g~~~~-v~~~Pe 157 (480)
|+||+|||++. ..++++.+.+.++++++|+...++.+++. ++.+.+.+.+. ...|. +..+|.
T Consensus 77 D~vi~~v~~~~---------------~~~~~~~l~~~l~~~~~vv~~~~~~~~~~-~~~~~l~~~~~~~v~~~~~~~~~~ 140 (359)
T 1bg6_A 77 DVILIVVPAIH---------------HASIAANIASYISEGQLIILNPGATGGAL-EFRKILRENGAPEVTIGETSSMLF 140 (359)
T ss_dssp SEEEECSCGGG---------------HHHHHHHHGGGCCTTCEEEESSCCSSHHH-HHHHHHHHTTCCCCEEEEESSCSE
T ss_pred CEEEEeCCchH---------------HHHHHHHHHHhCCCCCEEEEcCCCchHHH-HHHHHHHhcCCCCeEEEEecCCcE
Confidence 99999998642 25778889999999998887644333443 34555555321 11121 123554
Q ss_pred cc---ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHH---------------
Q 011650 158 FL---AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAA--------------- 219 (480)
Q Consensus 158 ~~---~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~--------------- 219 (480)
.. .||... .+....++.+|......+++..+.++++|..+. ...++ |.|++.
T Consensus 141 ~~~~~gpg~v~-~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~-----~~~di----~~k~~~nvn~~~n~~~al~~~ 210 (359)
T 1bg6_A 141 TCRSERPGQVT-VNAIKGAMDFACLPAAKAGWALEQIGSVLPQYV-----AVENV----LHTSLTNVNAVMHPLPTLLNA 210 (359)
T ss_dssp EEECSSTTEEE-EEEECSCEEEEEESGGGHHHHHHHHTTTCTTEE-----ECSCH----HHHHHCCHHHHHTHHHHHTTH
T ss_pred EEEeCCCCEEE-EEEeecceEEEeccccccHHHHHHHHHHhhhcE-----EcCCh----HhhhccCCCccccHHHHHhhh
Confidence 32 344332 121133556665322224556677777765431 12332 222221
Q ss_pred -----------------HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCC-----------CCCcccc-CCC-Ccc
Q 011650 220 -----------------NAFLAQRISSVNAMSALCEATGADVSQVSHAIGFDSR-----------IGPKFLN-ASV-GFG 269 (480)
Q Consensus 220 -----------------N~~~~~~ia~~nE~~~l~~~~gid~~~v~~~~~~~~~-----------i~~~~~~-pg~-g~g 269 (480)
|..+.+....+.|+..+++++|+++.++.+.+..... ..+++.. .+| .+-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~ 290 (359)
T 1bg6_A 211 ARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLN 290 (359)
T ss_dssp HHHHTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSC
T ss_pred chhhcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCC
Confidence 2235667788999999999999988666666543210 0111111 112 133
Q ss_pred ccchhhhH----HHHHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHHHhcCCC--CCCEEEEEeeccCCCCCcccC
Q 011650 270 GSCFQKDI----LNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSSMFNTV--SGKKIAILGFAFKKDTGDTRE 343 (480)
Q Consensus 270 G~c~~kD~----~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~~~~v~ilGla~K~~~~d~r~ 343 (480)
+.-+.||. .++++.|+++|++ .|+.+.+.+. +.....+.. .++++..+|++ +.+++|+|+
T Consensus 291 ~~~~~~D~~~~~g~~~~~a~~~gv~--~P~~~~l~~~-----------~~~~~~~~~~~~g~~~~~lgl~-~~~~~~~~~ 356 (359)
T 1bg6_A 291 TRYFFEDVSTGLVPLSELGRAVNVP--TPLIDAVLDL-----------ISSLIDTDFRKEGRTLEKLGLS-GLTAAGIRS 356 (359)
T ss_dssp CHHHHHHHHTTHHHHHHHHHHTTCC--CHHHHHHHHH-----------HHHHTTCCHHHHSCCTTTTTCT-TCCHHHHHH
T ss_pred ccceecCcCccHHHHHHHHHHcCCC--chHHHHHHHH-----------HHHHHCCChhhcCCCHHhcCCC-CCCHHHHHH
Confidence 33677887 6889999999998 6655544331 111111111 36678888998 778777653
No 57
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.69 E-value=3.5e-16 Score=155.00 Aligned_cols=206 Identities=14% Similarity=0.103 Sum_probs=146.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc------------CCCCCCCCChHHHHHHhcCCCEEEe
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS------------DQLPIYEPGLEEVVKQCRGKNLFFS 69 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~------------g~~~~~e~~l~~~~~~~~~~~l~~t 69 (480)
.||+|||+|.||..+|..++.+ |++|+++|++++.+++..+ +... .....++.+ .+++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~l-----~~i~~~ 78 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLK-GSLSAEEQL-----SLISSC 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCC-SSSCHHHHH-----HTEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC-CccCHHHHH-----hhcccc
Confidence 5899999999999999999998 9999999999987654321 1111 011222222 468899
Q ss_pred cCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEE-EecCCCcccHHHHHHHHHhhcC--
Q 011650 70 TDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVV-EKSTVPVKTAEAIEKILMHNSR-- 146 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~-- 146 (480)
+|+++++++||+||.|||. +.+++ ++++++|.+++++++|+. ++|++++.. ++..+.....
T Consensus 79 ~~l~~a~~~ad~ViEav~E-----------~l~iK--~~lf~~l~~~~~~~aIlaSNTSsl~is~---ia~~~~~p~r~i 142 (319)
T 3ado_A 79 TNLAEAVEGVVHIQECVPE-----------NLDLK--RKIFAQLDSIVDDRVVLSSSSSCLLPSK---LFTGLAHVKQCI 142 (319)
T ss_dssp CCHHHHTTTEEEEEECCCS-----------CHHHH--HHHHHHHHTTCCSSSEEEECCSSCCHHH---HHTTCTTGGGEE
T ss_pred cchHhHhccCcEEeecccc-----------HHHHH--HHHHHHHHHHhhhcceeehhhhhccchh---hhhhccCCCcEE
Confidence 9999999999999999986 34555 889999999999999884 445556543 2221111111
Q ss_pred CCceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEe-CCchhHHHHHHHHHHHHHH
Q 011650 147 GINFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILC-TNLWSAEVSKLAANAFLAQ 225 (480)
Q Consensus 147 g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~-~~~~~ae~~Kl~~N~~~~~ 225 (480)
|.+| |+|....+- -.|| .+..| ++++.+++.++++.+++ .++.+ .+ ...++.| .+
T Consensus 143 g~Hf---fNP~~~m~L---------VEiv-~g~~T--s~~~~~~~~~~~~~~gk-~pv~v~kd-----~pGFi~N---Rl 198 (319)
T 3ado_A 143 VAHP---VNPPYYIPL---------VELV-PHPET--SPATVDRTHALMRKIGQ-SPVRVLKE-----IDGFVLN---RL 198 (319)
T ss_dssp EEEE---CSSTTTCCE---------EEEE-ECTTC--CHHHHHHHHHHHHHTTC-EEEECSSC-----CTTTTHH---HH
T ss_pred EecC---CCCccccch---------HHhc-CCCCC--cHHHHHHHHHHHHHhCC-ccCCcCCC-----CCCEeHH---HH
Confidence 2222 466554431 1354 55444 78999999999999874 45543 33 3356777 56
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHhcCCC
Q 011650 226 RISSVNAMSALCEATGADVSQVSHAIGFDS 255 (480)
Q Consensus 226 ~ia~~nE~~~l~~~~gid~~~v~~~~~~~~ 255 (480)
..++++|+..+.+..+++++++..++....
T Consensus 199 ~~~~~~EA~~lv~eGvas~edID~~~~~g~ 228 (319)
T 3ado_A 199 QYAIISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 799999999999999999999999998664
No 58
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.67 E-value=6.5e-16 Score=169.73 Aligned_cols=207 Identities=20% Similarity=0.211 Sum_probs=138.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCC----CCCCCCC-hHHHHHHhcCCCEEEecCHHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQ----LPIYEPG-LEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~----~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a 75 (480)
||||+|||+|.||.++|.+|+++ ||+|++||++++.++..++.. ....+.+ +...-.....+++++++|++ +
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~-~ 388 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS--NYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYE-S 388 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSG-G
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHH-H
Confidence 57899999999999999999998 999999999999887653210 0000000 00000001235788999984 6
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEE-EecCCCcccHHHHHHHHHhhcC--CCceEE
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVV-EKSTVPVKTAEAIEKILMHNSR--GINFQI 152 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~~~~v 152 (480)
+++||+||+|||++. ...+.+++++.++++++++|+ ++||+++.. +.+.+..... |.+|
T Consensus 389 ~~~aDlVIeaVpe~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf-- 450 (725)
T 2wtb_A 389 FRDVDMVIEAVIENI-------------SLKQQIFADLEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHF-- 450 (725)
T ss_dssp GTTCSEEEECCCSCH-------------HHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEE--
T ss_pred HCCCCEEEEcCcCCH-------------HHHHHHHHHHHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecC--
Confidence 899999999998632 223667788999999999885 456776542 2222211110 2222
Q ss_pred eeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011650 153 LSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
++|.+..+ + ..|+ .+..+ ++++++.+.++++.+++ .++++.+. .+++.|. +.++++||
T Consensus 451 -~~P~~~~~------l---vevv-~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~d~-----~Gfi~Nr---il~~~~~E 508 (725)
T 2wtb_A 451 -FSPAHIMP------L---LEIV-RTNHT--SAQVIVDLLDVGKKIKK-TPVVVGNC-----TGFAVNR---MFFPYTQA 508 (725)
T ss_dssp -CSSTTTCC------E---EEEE-ECSSC--CHHHHHHHHHHHHHTTC-EEEEEESS-----TTTTHHH---HHHHHHHH
T ss_pred -CCCcccCc------e---EEEE-ECCCC--CHHHHHHHHHHHHHhCC-EEEEECCC-----ccHHHHH---HHHHHHHH
Confidence 45654322 1 1244 44433 58999999999999874 45666653 4456663 44678999
Q ss_pred HHHHHHHcCCCHHHHHHHh
Q 011650 233 MSALCEATGADVSQVSHAI 251 (480)
Q Consensus 233 ~~~l~~~~gid~~~v~~~~ 251 (480)
+..++++ |+|++++.+++
T Consensus 509 a~~l~~~-G~~~e~id~~~ 526 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDRAI 526 (725)
T ss_dssp HHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHC-CCCHHHHHHHH
Confidence 9999998 99999999998
No 59
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.67 E-value=4.8e-16 Score=170.61 Aligned_cols=203 Identities=16% Similarity=0.198 Sum_probs=136.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH---------hcCCCEEEecC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ---------CRGKNLFFSTD 71 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~---------~~~~~l~~t~d 71 (480)
+|||+|||+|+||.++|..|+++ ||+|++||+++++++...+.. +..++.+++. ...+++++++|
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d 387 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGIEQGLAEA----AKLLVGRVDKGRMTPAKMAEVLNGIRPTLS 387 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH----HHHHHHHHTTTSSCHHHHHHHHHHEEEESS
T ss_pred CCEEEEECCChhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHH----HHHHHHHHhcCCCCHHHHHHHhcCeEEECC
Confidence 57899999999999999999998 999999999999887632100 0001111100 00124788899
Q ss_pred HHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEE-EecCCCcccHHHHHHHHHhhcC--CC
Q 011650 72 VEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVV-EKSTVPVKTAEAIEKILMHNSR--GI 148 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~ 148 (480)
+ +++++||+||+|||++. .....+++++.++++++++|+ ++||+++.. +.+.+..... |.
T Consensus 388 ~-~~~~~aDlVIeaV~e~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~~~~~ig~ 450 (715)
T 1wdk_A 388 Y-GDFGNVDLVVEAVVENP-------------KVKQAVLAEVENHVREDAILASNTSTISISL---LAKALKRPENFVGM 450 (715)
T ss_dssp S-TTGGGCSEEEECCCSCH-------------HHHHHHHHHHHTTSCTTCEEEECCSSSCHHH---HGGGCSCGGGEEEE
T ss_pred H-HHHCCCCEEEEcCCCCH-------------HHHHHHHHHHHhhCCCCeEEEeCCCCCCHHH---HHHHhcCccceEEE
Confidence 8 56899999999998632 223567888999999999886 456776542 3222211100 11
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHH
Q 011650 149 NFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRIS 228 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia 228 (480)
+| ++|....+. ..++ .+..+ ++++++.+.++++.+++ .++++++. .+++.|. +.++
T Consensus 451 hf---~~P~~~~~l---------vevv-~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~d~-----~Gfi~Nr---il~~ 506 (715)
T 1wdk_A 451 HF---FNPVHMMPL---------VEVI-RGEKS--SDLAVATTVAYAKKMGK-NPIVVNDC-----PGFLVNR---VLFP 506 (715)
T ss_dssp EC---CSSTTTCCE---------EEEE-ECSSC--CHHHHHHHHHHHHHTTC-EEEEEESC-----TTTTHHH---HHHH
T ss_pred Ec---cCCcccCce---------EEEE-ECCCC--CHHHHHHHHHHHHHhCC-EeEEEcCC-----CChhhhH---HHHH
Confidence 22 345433221 1244 44333 58999999999999874 45666653 3456663 3457
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHh
Q 011650 229 SVNAMSALCEATGADVSQVSHAI 251 (480)
Q Consensus 229 ~~nE~~~l~~~~gid~~~v~~~~ 251 (480)
++||+..++++ |+|++++.+++
T Consensus 507 ~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 507 YFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCHHHHHHHH
Confidence 89999999997 99999999998
No 60
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.66 E-value=1.9e-15 Score=151.87 Aligned_cols=261 Identities=18% Similarity=0.191 Sum_probs=165.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||..+|..|+++ |++|++||++ ++++.+++.+..+..++.. ...++++++++++ +.++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~-~~~~D 72 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGAT------HTLPVRATHDAAA-LGEQD 72 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEE------EEECCEEESCHHH-HCCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCe------EEEeeeEECCHHH-cCCCC
Confidence 48999999999999999999998 9999999996 6778887643322211110 0113466788876 68999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC-C-----------------cccHHHHHHHHH
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV-P-----------------VKTAEAIEKILM 142 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~-----------------~gt~~~l~~~l~ 142 (480)
+||+|||++ .+.++++.+.+.++++++|+..+.. + .+..+.+.+.+.
T Consensus 73 ~Vilavk~~---------------~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 137 (335)
T 3ghy_A 73 VVIVAVKAP---------------ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP 137 (335)
T ss_dssp EEEECCCHH---------------HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC
T ss_pred EEEEeCCch---------------hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC
Confidence 999999852 3577888898999889888754432 2 233334554443
Q ss_pred hhcCCCceEEeeC-CcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHH
Q 011650 143 HNSRGINFQILSN-PEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANA 221 (480)
Q Consensus 143 ~~~~g~~~~v~~~-Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~ 221 (480)
... .-..+++. ..+..||.+.+.. ..++.+|..+.. +.+..+.+.++|+..+- ......|+....|.|++.|+
T Consensus 138 ~~~--v~~gv~~~~a~~~~pg~v~~~~--~g~~~iG~~~~~-~~~~~~~l~~~l~~~g~-~~~~~~di~~~~w~Kl~~na 211 (335)
T 3ghy_A 138 TRH--VLGCVVHLTCATVSPGHIRHGN--GRRLILGEPAGG-ASPRLASIAALFGRAGL-QAECSEAIQRDIWFKLWGNM 211 (335)
T ss_dssp GGG--EEEEEECCCEEESSTTEEEECS--CCEEEEECTTCS-CCHHHHHHHHHHHHTTC-EEEECSCHHHHHHHHHHTTT
T ss_pred ccc--EEEEEEEEEEEEcCCcEEEECC--CCeEEEecCCCC-cCHHHHHHHHHHHhCCC-CcEeCchHHHHHHHHHHHHh
Confidence 221 00112222 2344566654332 346778864322 24567888889987542 34456799999999987653
Q ss_pred ---------------------HHHHHHHHHHHHHHHHHHcCCCH----HHHHHHhcCCCC-CCCccccCCCCcccc-chh
Q 011650 222 ---------------------FLAQRISSVNAMSALCEATGADV----SQVSHAIGFDSR-IGPKFLNASVGFGGS-CFQ 274 (480)
Q Consensus 222 ---------------------~~~~~ia~~nE~~~l~~~~gid~----~~v~~~~~~~~~-i~~~~~~pg~g~gG~-c~~ 274 (480)
.+++....++|+..++++.|+++ +++++.....+. .++++.+-- -|. -.-
T Consensus 212 ~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~sSM~qD~~---~gr~~tE 288 (335)
T 3ghy_A 212 TMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGAFKTSMLQDAE---AGRGPLE 288 (335)
T ss_dssp THHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCSCCCTTTC--------CCCCC
T ss_pred hhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCCCCcHHHHHHH---cCCCCch
Confidence 46778899999999999999753 445554433222 122221111 111 112
Q ss_pred hh--HHHHHHHHHHCCCchhhhHHH
Q 011650 275 KD--ILNLVYICECNGLPEVANYWK 297 (480)
Q Consensus 275 kD--~~~l~~~a~~~g~~~~~~~~~ 297 (480)
.| ..++++.|+++|++ .|+.+
T Consensus 289 id~i~G~vv~~a~~~gv~--~P~~~ 311 (335)
T 3ghy_A 289 IDALVASVREIGLHVGVP--TPQID 311 (335)
T ss_dssp HHHHTHHHHHHHHHHTCC--CHHHH
T ss_pred HHHHhhHHHHHHHHhCCC--CCHHH
Confidence 22 34788899999998 55443
No 61
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.66 E-value=1.4e-15 Score=159.28 Aligned_cols=205 Identities=16% Similarity=0.162 Sum_probs=137.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH--h-----cCCCEEEecCHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ--C-----RGKNLFFSTDVE 73 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~--~-----~~~~l~~t~d~~ 73 (480)
||||+|||+|.||.++|..|+++ |++|++||+++++++...+.. +..++..+.. . .....+++++++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKII----TFTLEKEASRAHQNGQASAKPKLRFSSSTK 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHH----HHHHHHHHHHHHHTTCCCCCCCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHH----HHHHHHHHHcCCCCHHHHHHHHhhhcCCHH
Confidence 57899999999999999999998 999999999999887765411 0111222211 0 012245688884
Q ss_pred HHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC--CCceE
Q 011650 74 KHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR--GINFQ 151 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~--g~~~~ 151 (480)
++++||+||+|||+. +.....+++++.++++++++|+. ||..+..+ .+++.+..... |.+|
T Consensus 111 -~~~~aDlVIeaVpe~-------------~~~k~~v~~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf- 173 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFED-------------MNLKKKVFAELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHF- 173 (463)
T ss_dssp -GGTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEE-
T ss_pred -HHCCCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeec-
Confidence 589999999999852 23346778889999999998875 67666654 44443321111 2222
Q ss_pred EeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHH
Q 011650 152 ILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVN 231 (480)
Q Consensus 152 v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
++|....+ + ..+ +.+..+ ++++++.+.++++.+++ .++++.+. .+++.|. +...+++
T Consensus 174 --~~P~~~~~------l---vev-v~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~~~-----~gfi~Nr---ll~~~~~ 230 (463)
T 1zcj_A 174 --FSPAHVMR------L---LEV-IPSRYS--SPTTIATVMSLSKKIGK-IGVVVGNC-----YGFVGNR---MLAPYYN 230 (463)
T ss_dssp --CSSTTTCC------E---EEE-EECSSC--CHHHHHHHHHHHHHTTC-EEEEBCCS-----TTTTHHH---HHHHHHH
T ss_pred --CCCcccce------e---EEE-eCCCCC--CHHHHHHHHHHHHHhCC-EEEEECCC-----ccHHHHH---HHHHHHH
Confidence 35654321 1 124 444333 58999999999999864 45666542 2335553 3345779
Q ss_pred HHHHHHHHcCCCHHHHHHHhc
Q 011650 232 AMSALCEATGADVSQVSHAIG 252 (480)
Q Consensus 232 E~~~l~~~~gid~~~v~~~~~ 252 (480)
|...++++ |++++++.+++.
T Consensus 231 ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 231 QGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp HHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHHH
Confidence 99999988 899999999996
No 62
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.65 E-value=3.1e-15 Score=145.08 Aligned_cols=197 Identities=13% Similarity=0.057 Sum_probs=134.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||..+|..|++. |++ |.+||+++++.+.+.+. -++..+++++++++++|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~------------------~g~~~~~~~~~~~~~~D 70 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQK------------------VEAEYTTDLAEVNPYAK 70 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHH------------------TTCEEESCGGGSCSCCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHH------------------cCCceeCCHHHHhcCCC
Confidence 7899999999999999999998 898 99999999998887642 12456778888788999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|+|.+ .+.++++++.+.++++++|+..|+..+... +.+.+.+. ......+|-...
T Consensus 71 vvi~av~~~---------------~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~----~~~~~~~~~~g~ 129 (266)
T 3d1l_A 71 LYIVSLKDS---------------AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHY----GVFYPMQTFSKQ 129 (266)
T ss_dssp EEEECCCHH---------------HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSE----EEEEECCCC---
T ss_pred EEEEecCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhc----cCcCCceecCCC
Confidence 999999842 246778888888889999998887654332 32222211 111233442111
Q ss_pred cCccccccCCCCeEEE-EccCCcchHHHHHHHHHHHhccCCCCeEEeCCch---hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 161 EGTAINDLFKPDRVLI-GGRETPEGMKAIKALKDVYAHWVPEDRILCTNLW---SAEVSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 161 ~G~a~~~~~~~~~vvi-G~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~---~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
+. ..+.+.+ +++ |+ +++..+.++++|+.++. .++...+.+ ...++|+++|.. ..+..+.|. +
T Consensus 130 ~~---~~~~~~~-~~v~~~-----~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l 195 (266)
T 3d1l_A 130 RE---VDFKEIP-FFIEAS-----STEDAAFLKAIASTLSN-RVYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--L 195 (266)
T ss_dssp CC---CCCTTCC-EEEEES-----SHHHHHHHHHHHHTTCS-CEEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
T ss_pred ch---hhcCCCe-EEEecC-----CHHHHHHHHHHHHhcCC-cEEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
Confidence 11 1223333 445 44 37889999999999863 344444333 467899998863 233444453 7
Q ss_pred HHHcCCCHHHHHHHhcC
Q 011650 237 CEATGADVSQVSHAIGF 253 (480)
Q Consensus 237 ~~~~gid~~~v~~~~~~ 253 (480)
+++.|+|.+++.+++..
T Consensus 196 ~~~~Gl~~~~~~~l~~~ 212 (266)
T 3d1l_A 196 LKKYNLPFDVMLPLIDE 212 (266)
T ss_dssp HHHTTCCGGGGHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 78999999888777764
No 63
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.65 E-value=9.5e-15 Score=143.46 Aligned_cols=173 Identities=17% Similarity=0.153 Sum_probs=120.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||.++|..|++++.|++|++||+++++++.+.+... ....+++++++++++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-----------------VDEATADFKVFAALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-----------------CSEEESCTTTTGGGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-----------------cccccCCHHHhhcCCC
Confidence 47999999999999999999987335899999999999888764210 0135667777788999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhh-CCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCC---
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADV-SKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNP--- 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~-l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P--- 156 (480)
+||+|||.+ .+.++++++.+. ++++++|++.|++.++..+.+.+.+.+. +..| +..+|
T Consensus 69 vVilavp~~---------------~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~--~~~~-v~~~P~~g 130 (290)
T 3b1f_A 69 VIILAVPIK---------------KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDK--PVQF-VGSHPMAG 130 (290)
T ss_dssp EEEECSCHH---------------HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTS--SCEE-EEEEEC--
T ss_pred EEEEcCCHH---------------HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhcccc--CCEE-EEeCCcCC
Confidence 999999852 246778888888 8999999988887777666776666541 1222 33334
Q ss_pred -cccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchh
Q 011650 157 -EFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWS 211 (480)
Q Consensus 157 -e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ 211 (480)
+...++.+..+++....+++... ...+++..+.++++|+.++ ..++..+.+.
T Consensus 131 ~~~~g~~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~G--~~~~~~~~~~ 183 (290)
T 3b1f_A 131 SHKSGAVAANVNLFENAYYIFSPS-CLTKPNTIPALQDLLSGLH--ARYVEIDAAE 183 (290)
T ss_dssp ---CCTTSCCTTTTTTSEEEEEEC-TTCCTTHHHHHHHHTGGGC--CEEEECCHHH
T ss_pred CCcchHHHhhHHHhCCCeEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHH
Confidence 34456655555666655555421 1124678899999999985 3565555544
No 64
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.64 E-value=1e-14 Score=142.30 Aligned_cols=190 Identities=14% Similarity=0.098 Sum_probs=130.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||+++++++.+++... ...++++++++ .++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~-----------------~~~~~~~~~~~-~~~D~ 60 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQL-----------------VDEAGQDLSLL-QTAKI 60 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGG-TTCSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCC-----------------CccccCCHHHh-CCCCE
Confidence 7999999999999999999998 8999999999999888765211 01346778876 89999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||.. .+.++++++.+.++++++|++.+++.+...+.+.+.+... ...+-..+++...|
T Consensus 61 vi~av~~~---------------~~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~---~~~~p~~g~~~~gp 122 (279)
T 2f1k_A 61 IFLCTPIQ---------------LILPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWSGF---IGGHPMAGTAAQGI 122 (279)
T ss_dssp EEECSCHH---------------HHHHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHSTTC---EEEEECCCCSCSSG
T ss_pred EEEECCHH---------------HHHHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhCCE---eecCcccCCccCCH
Confidence 99999842 3567888899999999999887777665555444332210 01111223344456
Q ss_pred CccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHH
Q 011650 162 GTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVN 231 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
+.+..+++....+++... ...+++..+.++++|+.++. .++...+....+++|++.|.-..+..++++
T Consensus 123 ~~a~~~~~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~p~~i~~al~~ 190 (279)
T 2f1k_A 123 DGAEENLFVNAPYVLTPT-EYTDPEQLACLRSVLEPLGV-KIYLCTPADHDQAVAWISHLPVMVSAALIQ 190 (279)
T ss_dssp GGCCTTTTTTCEEEEEEC-TTCCHHHHHHHHHHHGGGTC-EEEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhHHHhCCCcEEEecC-CCCCHHHHHHHHHHHHHcCC-EEEEcCHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 555545544433434321 11247889999999999852 345556678899999999974444444433
No 65
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.2e-15 Score=152.84 Aligned_cols=217 Identities=14% Similarity=0.127 Sum_probs=154.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--------eEEEEeCCHH-----HHHHHHcC-CCCCCCCChHHHHHHhcCCCEE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--------EVAVVDISVP-----RINAWNSD-QLPIYEPGLEEVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--------~V~~~D~~~~-----~v~~l~~g-~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
.||+|||.|.||+++|..|+++ || +|++|.++++ .++.+++. .++.|.|+.. ...+++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n--g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~------Lp~~i~ 106 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN--CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGIT------LPDNLV 106 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCC------CCSSEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc--CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCc------CCCCcE
Confidence 3899999999999999999997 64 5999998765 46677764 4555655542 246799
Q ss_pred EecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC-Cccc--HHHHHHHHHhh
Q 011650 68 FSTDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV-PVKT--AEAIEKILMHN 144 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~~gt--~~~l~~~l~~~ 144 (480)
+++|+++++++||+||++||+. .++++++++.++++++.++|..+.. .+++ .+.+.+.+.+.
T Consensus 107 ~t~dl~~al~~ad~ii~avPs~---------------~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~ 171 (391)
T 4fgw_A 107 ANPDLIDSVKDVDIIVFNIPHQ---------------FLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEE 171 (391)
T ss_dssp EESCHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHH
T ss_pred EeCCHHHHHhcCCEEEEECChh---------------hhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHH
Confidence 9999999999999999999863 3688999999999999988877743 4333 23455556554
Q ss_pred cCCCceEEeeCCcccccCccccccCCCCeEEEEccCCcc-----hHHHHHHHHHHHhccCCCCeEEeCCchhHHHHH---
Q 011650 145 SRGINFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPE-----GMKAIKALKDVYAHWVPEDRILCTNLWSAEVSK--- 216 (480)
Q Consensus 145 ~~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~-----~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~K--- 216 (480)
. +..+.++++|.+..+-.. ..|..+++++.+... ++...+.++++|..-. ...+...|+...|+..
T Consensus 172 ~-~~~~~vLsGPs~A~EVa~----~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~-frvy~s~DviGvElgGAlK 245 (391)
T 4fgw_A 172 L-GIQCGALSGANIATEVAQ----EHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPY-FHVSVIEDVAGISICGALK 245 (391)
T ss_dssp H-CCEEEEEECSCCHHHHHT----TCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTT-EEEEEESCHHHHHHHHHHH
T ss_pred h-CccceeccCCchHHHhhc----CCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCC-EEEEEeCCccceehHHHHH
Confidence 3 356778899998765322 345667777653210 1223567888887632 1234457887777754
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHH
Q 011650 217 --------------LAANAFLAQRISSVNAMSALCEAT---GADVSQV 247 (480)
Q Consensus 217 --------------l~~N~~~~~~ia~~nE~~~l~~~~---gid~~~v 247 (480)
+-.|+..++....++||.+|+..+ |.+...+
T Consensus 246 NViAIAaGi~dGlg~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~ 293 (391)
T 4fgw_A 246 NVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYY 293 (391)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceee
Confidence 345777788888999999999998 4444433
No 66
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.63 E-value=2e-14 Score=138.01 Aligned_cols=198 Identities=17% Similarity=0.238 Sum_probs=127.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC----eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI----EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~----~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
||||+|||+|.||.++|..|+++ |+ +|++||+++++++.+.+. .+++.++++++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~------------------~g~~~~~~~~e~~ 61 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEK------------------YGLTTTTDNNEVA 61 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHH------------------HCCEECSCHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHH------------------hCCEEeCChHHHH
Confidence 47999999999999999999998 88 999999999999887641 1356678888889
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEE-ecCCCcccHHHHHHHHHhhcCCCceE--Ee
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVE-KSTVPVKTAEAIEKILMHNSRGINFQ--IL 153 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~g~~~~--v~ 153 (480)
++||+||+|||. . .+.++++++.++++++++|+. .++++ .+.+++.+... ..+. ..
T Consensus 62 ~~aDvVilav~~-~--------------~~~~v~~~l~~~l~~~~~vvs~~~gi~---~~~l~~~~~~~---~~~v~~~p 120 (247)
T 3gt0_A 62 KNADILILSIKP-D--------------LYASIINEIKEIIKNDAIIVTIAAGKS---IESTENAFNKK---VKVVRVMP 120 (247)
T ss_dssp HHCSEEEECSCT-T--------------THHHHC---CCSSCTTCEEEECSCCSC---HHHHHHHHCSC---CEEEEEEC
T ss_pred HhCCEEEEEeCH-H--------------HHHHHHHHHHhhcCCCCEEEEecCCCC---HHHHHHHhCCC---CcEEEEeC
Confidence 999999999963 1 146778888888988988773 23343 23455444321 1121 12
Q ss_pred eCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHH-HHHHHHHHHHHHHHHHHHH
Q 011650 154 SNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAE-VSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 154 ~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae-~~Kl~~N~~~~~~ia~~nE 232 (480)
..|....+|. ..+..+.. .+++..+.++++|+.++. .+.. +..... .+.+.. ..-+....++..
T Consensus 121 ~~p~~~~~g~---------~~~~~~~~--~~~~~~~~~~~l~~~~G~--~~~~-~e~~~d~~~a~~g-~gpa~~~~~~ea 185 (247)
T 3gt0_A 121 NTPALVGEGM---------SALCPNEM--VTEKDLEDVLNIFNSFGQ--TEIV-SEKLMDVVTSVSG-SSPAYVYMIIEA 185 (247)
T ss_dssp CGGGGGTCEE---------EEEEECTT--CCHHHHHHHHHHHGGGEE--EEEC-CGGGHHHHHHHHH-HHHHHHHHHHHH
T ss_pred ChHHHHcCce---------EEEEeCCC--CCHHHHHHHHHHHHhCCC--EEEe-CHHHccHHHHHhc-cHHHHHHHHHHH
Confidence 3444333332 13333221 257889999999999853 4444 333222 233322 122333444445
Q ss_pred HHHHHHHcCCCHHHHHHHhcCC
Q 011650 233 MSALCEATGADVSQVSHAIGFD 254 (480)
Q Consensus 233 ~~~l~~~~gid~~~v~~~~~~~ 254 (480)
+...+.+.|+|.++..+++...
T Consensus 186 l~~a~~~~Gl~~~~a~~~~~~~ 207 (247)
T 3gt0_A 186 MADAAVLDGMPRNQAYKFAAQA 207 (247)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHH
Confidence 5555889999999999988643
No 67
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.61 E-value=2.5e-14 Score=142.78 Aligned_cols=197 Identities=14% Similarity=0.120 Sum_probs=132.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC----CeEEEEeCCHH--HHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS----IEVAVVDISVP--RINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G----~~V~~~D~~~~--~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
+|||+|||+|.||.++|..|+++ | ++|++||++++ +++.+++. ++++++++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~-------------------G~~~~~~~~e 80 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKM-------------------GVKLTPHNKE 80 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHH-------------------TCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHc-------------------CCEEeCChHH
Confidence 47899999999999999999998 8 89999999986 77776531 3566778888
Q ss_pred HhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC-CCcccHHHHHHHHHhhcCCCceEEe
Q 011650 75 HVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST-VPVKTAEAIEKILMHNSRGINFQIL 153 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~ 153 (480)
++++||+||+||| |. .+.++++++.+.++++++|+..++ ++ .+.+.+.+.+...+.. .+.
T Consensus 81 ~~~~aDvVilav~-~~--------------~~~~vl~~l~~~l~~~~ivvs~s~gi~---~~~l~~~l~~~~~~~~-vv~ 141 (322)
T 2izz_A 81 TVQHSDVLFLAVK-PH--------------IIPFILDEIGADIEDRHIVVSCAAGVT---ISSIEKKLSAFRPAPR-VIR 141 (322)
T ss_dssp HHHHCSEEEECSC-GG--------------GHHHHHHHHGGGCCTTCEEEECCTTCC---HHHHHHHHHTTSSCCE-EEE
T ss_pred HhccCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEeCCCCC---HHHHHHHHhhcCCCCe-EEE
Confidence 8899999999998 32 257788899999988998887654 33 2345566654311112 222
Q ss_pred eCC---cccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHH--HHHHHHHHH
Q 011650 154 SNP---EFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAA--NAFLAQRIS 228 (480)
Q Consensus 154 ~~P---e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~--N~~~~~~ia 228 (480)
..| .....| ..++.++... +++..+.++++|+.++ ..+....-.....+.+.. |.|.. .
T Consensus 142 ~~p~~p~~~~~g---------~~v~~~g~~~--~~~~~~~v~~ll~~~G--~~~~~~e~~~~~~~a~~g~gpa~~~---~ 205 (322)
T 2izz_A 142 CMTNTPVVVREG---------ATVYATGTHA--QVEDGRLMEQLLSSVG--FCTEVEEDLIDAVTGLSGSGPAYAF---T 205 (322)
T ss_dssp EECCGGGGGTCE---------EEEEEECTTC--CHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHTTTHHHHHH---H
T ss_pred EeCCcHHHHcCC---------eEEEEeCCCC--CHHHHHHHHHHHHhCC--CEEEeCHHHHHHHHHHhcCHHHHHH---H
Confidence 233 222222 1355565422 4678899999999875 244443222233444432 33332 3
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHhcC
Q 011650 229 SVNAMSALCEATGADVSQVSHAIGF 253 (480)
Q Consensus 229 ~~nE~~~l~~~~gid~~~v~~~~~~ 253 (480)
+++.++..+.+.|+|.+.+.+.+..
T Consensus 206 ~~eala~a~~~~Gl~~~~a~~l~~~ 230 (322)
T 2izz_A 206 ALDALADGGVKMGLPRRLAVRLGAQ 230 (322)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5555666688999999888877764
No 68
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.61 E-value=2.4e-14 Score=142.73 Aligned_cols=252 Identities=17% Similarity=0.137 Sum_probs=157.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+.+|..|+++ |++|++| +++++++.+++.+..+..++.. ...++.+++++++ +.++|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~------~~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFD------EQVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCE------EEECCEEESCGGG-GTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCc------EEEeeeeeCCHHH-cCCCC
Confidence 48999999999999999999998 9999999 9999999998643222222211 0123567788765 68999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHH-hhcCCCceEEeeCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILM-HNSRGINFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~-~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||+. .+.++++.+.++++++++|+.. +...+..+.+.+.+. +...+.. ..+-.+.
T Consensus 89 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~-~nGi~~~~~l~~~~~~~vl~g~~---~~~a~~~ 149 (318)
T 3hwr_A 89 LVLFCVKST---------------DTQSAALAMKPALAKSALVLSL-QNGVENADTLRSLLEQEVAAAVV---YVATEMA 149 (318)
T ss_dssp EEEECCCGG---------------GHHHHHHHHTTTSCTTCEEEEE-CSSSSHHHHHHHHCCSEEEEEEE---EEEEEEE
T ss_pred EEEEEcccc---------------cHHHHHHHHHHhcCCCCEEEEe-CCCCCcHHHHHHHcCCcEEEEEE---EEeEEEc
Confidence 999999853 2478889999999999887654 334444455655552 1110100 0111223
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHH------------------
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANA------------------ 221 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------ 221 (480)
.|+.+.+... .++.+|.. +..+.+.++|+..+ .......|+...+|.|++.|+
T Consensus 150 gP~~~~~~~~--g~~~ig~~------~~~~~l~~~l~~~~-~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~ 220 (318)
T 3hwr_A 150 GPGHVRHHGR--GELVIEPT------SHGANLAAIFAAAG-VPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVR 220 (318)
T ss_dssp ETTEEEEEEE--EEEEECCC------TTTHHHHHHHHHTT-CCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTT
T ss_pred CCeEEEEcCC--ceEEEcCC------HHHHHHHHHHHhCC-CCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhc
Confidence 3443322211 13456752 23466788888754 234556799999999999885
Q ss_pred ---HHHHHHHHHHHHHHHHHHcCCCH-----HHHHHHhcCCCC-CCCccc--cCCCCccccchhhh--HHHHHHHHHHCC
Q 011650 222 ---FLAQRISSVNAMSALCEATGADV-----SQVSHAIGFDSR-IGPKFL--NASVGFGGSCFQKD--ILNLVYICECNG 288 (480)
Q Consensus 222 ---~~~~~ia~~nE~~~l~~~~gid~-----~~v~~~~~~~~~-i~~~~~--~pg~g~gG~c~~kD--~~~l~~~a~~~g 288 (480)
.+.+....+.|+..++++.|+++ +.+.+.+...+. .++++. .-|- -...| ..++++.++++|
T Consensus 221 ~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~~~gr-----~tEid~i~G~vv~~a~~~g 295 (318)
T 3hwr_A 221 GEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMPRQSSSTAQDLARGK-----RSEIDHLNGLIVRRGDALG 295 (318)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSTTCCCHHHHHHHTTC-----CCSGGGTHHHHHHHHHHTT
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCCCcHHHHHHHcCC-----hhHHHHHHHHHHHHHHHhC
Confidence 23455678899999999999863 334443332211 111111 1111 01111 347888999999
Q ss_pred CchhhhHHH
Q 011650 289 LPEVANYWK 297 (480)
Q Consensus 289 ~~~~~~~~~ 297 (480)
++ .|+.+
T Consensus 296 v~--tP~~~ 302 (318)
T 3hwr_A 296 IP--VPANR 302 (318)
T ss_dssp CC--CHHHH
T ss_pred CC--CcHHH
Confidence 98 55444
No 69
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.60 E-value=6.8e-15 Score=144.38 Aligned_cols=204 Identities=14% Similarity=0.077 Sum_probs=134.1
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+ |.||.++|..|+++ |++|++||+++++++.+.+.. +..+ ++.+++++|
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g-------------------~~~~-~~~~~~~~a 68 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMG-------------------IPLT-DGDGWIDEA 68 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTT-------------------CCCC-CSSGGGGTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcC-------------------CCcC-CHHHHhcCC
Confidence 479999999 99999999999998 999999999999988877521 1122 445668899
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||.. .+.++++++.+.++++++|++.|+..+ .+.+. +...+.. ++..+|.+.
T Consensus 69 DvVi~av~~~---------------~~~~v~~~l~~~l~~~~ivv~~s~~~~--~~~l~----~~~~~~~-~v~~~P~~~ 126 (286)
T 3c24_A 69 DVVVLALPDN---------------IIEKVAEDIVPRVRPGTIVLILDAAAP--YAGVM----PERADIT-YFIGHPCHP 126 (286)
T ss_dssp SEEEECSCHH---------------HHHHHHHHHGGGSCTTCEEEESCSHHH--HHTCS----CCCTTSE-EEEEEECCS
T ss_pred CEEEEcCCch---------------HHHHHHHHHHHhCCCCCEEEECCCCch--hHHHH----hhhCCCe-EEecCCCCc
Confidence 9999999842 257788899999999999988666432 12222 1111222 333566442
Q ss_pred cc---Cc---cccccCC----CCeEEEEccCCcchHHHHHHHHHHHhccCCCC---eEEeCCchhHHHH-HHHHHHHHHH
Q 011650 160 AE---GT---AINDLFK----PDRVLIGGRETPEGMKAIKALKDVYAHWVPED---RILCTNLWSAEVS-KLAANAFLAQ 225 (480)
Q Consensus 160 ~~---G~---a~~~~~~----~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~---~v~~~~~~~ae~~-Kl~~N~~~~~ 225 (480)
.+ +. ...+... ...++++... +++..+.++++|+.++ . .++..+....... |.+.|.....
T Consensus 127 ~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~---~~~~~~~v~~l~~~~G--~~~~~~~~v~~~~~~~~~~a~~n~~~~~ 201 (286)
T 3c24_A 127 PLFNDETDPAARTDYHGGIAKQAIVCALMQG---PEEHYAIGADICETMW--SPVTRTHRVTTEQLAILEPGLSEMVAMP 201 (286)
T ss_dssp CSSCCCCSHHHHTCSSSSSSCEEEEEEEEES---CTHHHHHHHHHHHHHT--CSEEEEEECCHHHHHHHTTHHHHTTHHH
T ss_pred cccccccchhhccCcccccccceeeeeccCC---CHHHHHHHHHHHHHhc--CCcceEEEeChhHhHHHHHHHHHHHHHH
Confidence 22 11 1111100 0112222111 3678999999999985 3 3444444444444 8988865544
Q ss_pred -HHHHHHHHHHHHHHcCCCHHHHHHHhcC
Q 011650 226 -RISSVNAMSALCEATGADVSQVSHAIGF 253 (480)
Q Consensus 226 -~ia~~nE~~~l~~~~gid~~~v~~~~~~ 253 (480)
.+++++++...+.+.|+|.+++.+.+..
T Consensus 202 ~~~~~~eal~~~~~~~Gl~~~~~~~~~~~ 230 (286)
T 3c24_A 202 FVETMVHAVDECADRYGIDRQAALDFMIG 230 (286)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4555556778888889999998887763
No 70
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.59 E-value=1.5e-13 Score=136.44 Aligned_cols=259 Identities=14% Similarity=0.061 Sum_probs=158.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCC-ChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEP-GLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~-~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++.+..+..+ +- ..-..+.+++++++ +..+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g~------~~~~~~~~~~~~~~-~~~~D 71 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSINGD------FTLPHVKGYRAPEE-IGPMD 71 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTCC------EEESCCCEESCHHH-HCCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCCe------EEEeeceeecCHHH-cCCCC
Confidence 7999999999999999999998 99999999986 37777543222110 00 00002345678765 78999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||+.. +.++++.+.+++.++++|+.. +...+..+.+.+.+.+... ....+..+-.+..
T Consensus 72 ~vilavk~~~---------------~~~~l~~l~~~l~~~~~iv~l-~nGi~~~~~l~~~~~~~~v-~~~~~~~~a~~~~ 134 (312)
T 3hn2_A 72 LVLVGLKTFA---------------NSRYEELIRPLVEEGTQILTL-QNGLGNEEALATLFGAERI-IGGVAFLCSNRGE 134 (312)
T ss_dssp EEEECCCGGG---------------GGGHHHHHGGGCCTTCEEEEC-CSSSSHHHHHHHHTCGGGE-EEEEEEEECCBCS
T ss_pred EEEEecCCCC---------------cHHHHHHHHhhcCCCCEEEEe-cCCCCcHHHHHHHCCCCcE-EEEEEEeeeEEcC
Confidence 9999998531 256788999999988877643 2334444556655543210 0001112233445
Q ss_pred cCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHH-------------------
Q 011650 161 EGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANA------------------- 221 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------- 221 (480)
||...+.. +..+.+|..+.. +.+..+.+.++|+..+- ......|+...+|.|++.|+
T Consensus 135 p~~v~~~~--~g~~~ig~~~~~-~~~~~~~l~~~l~~~g~-~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~ 210 (312)
T 3hn2_A 135 PGEVHHLG--AGRIILGEFLPR-DTGRIEELAAMFRQAGV-DCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILAR 210 (312)
T ss_dssp SSEEEECE--EEEEEEEESSCC-CSHHHHHHHHHHHHTTC-CEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTS
T ss_pred CcEEEECC--CCeEEEecCCCC-ccHHHHHHHHHHHhCCC-CcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhC
Confidence 66554322 346778865322 24567788889887542 34556799999999999885
Q ss_pred --HHHHHHHHHHHHHHHHHHcC--CC-----HHHHHHHhcCCCCC-CCccccCCCCccccchhhh--HHHHHHHHHHCCC
Q 011650 222 --FLAQRISSVNAMSALCEATG--AD-----VSQVSHAIGFDSRI-GPKFLNASVGFGGSCFQKD--ILNLVYICECNGL 289 (480)
Q Consensus 222 --~~~~~ia~~nE~~~l~~~~g--id-----~~~v~~~~~~~~~i-~~~~~~pg~g~gG~c~~kD--~~~l~~~a~~~g~ 289 (480)
.+.+....+.|+.+++++.| ++ .+.+++.....++. ++++.+-- -|.-.-.| ..++++.|+++|+
T Consensus 211 ~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~~sSM~qD~~---~gr~tEid~i~G~vv~~a~~~gv 287 (312)
T 3hn2_A 211 DVSRKLVRGIMLEVIAGANAQGLATFIADGYVDDMLEFTDAMGEYKPSMEIDRE---EGRPLEIAAIFRTPLAYGAREGI 287 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHHHHHTTSCSCCCHHHHHHH---TTCCCCHHHHTHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHhcCCCCCchHHHHHH---hCCCccHHHHhhHHHHHHHHhCC
Confidence 24455678899999999999 64 34455544432221 11110000 01111111 2377888999998
Q ss_pred chhhhHHH
Q 011650 290 PEVANYWK 297 (480)
Q Consensus 290 ~~~~~~~~ 297 (480)
+ .|+.+
T Consensus 288 ~--~P~~~ 293 (312)
T 3hn2_A 288 A--MPRVE 293 (312)
T ss_dssp C--CHHHH
T ss_pred C--CCHHH
Confidence 8 55333
No 71
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.57 E-value=1.2e-13 Score=137.80 Aligned_cols=254 Identities=15% Similarity=0.111 Sum_probs=156.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC---CCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIY---EPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~---e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++.+..+. ..+.. -..+.++++++++.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~-------~~~~~~~~~~~~~~~~ 71 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD--YETVKAKGIRIRSATLGDYT-------FRPAAVVRSAAELETK 71 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT--HHHHHHHCEEEEETTTCCEE-------ECCSCEESCGGGCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh--HHHHHhCCcEEeecCCCcEE-------EeeeeeECCHHHcCCC
Confidence 7999999999999999999998 99999999987 266765322111 00000 0023456787775458
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCC--
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNP-- 156 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P-- 156 (480)
+|+||+|||+... .++++.+.++++++++|+... ...+..+.+.+.+... .++++|
T Consensus 72 ~DlVilavK~~~~---------------~~~l~~l~~~l~~~t~Iv~~~-nGi~~~~~l~~~~~~~------~vl~g~~~ 129 (320)
T 3i83_A 72 PDCTLLCIKVVEG---------------ADRVGLLRDAVAPDTGIVLIS-NGIDIEPEVAAAFPDN------EVISGLAF 129 (320)
T ss_dssp CSEEEECCCCCTT---------------CCHHHHHTTSCCTTCEEEEEC-SSSSCSHHHHHHSTTS------CEEEEEEE
T ss_pred CCEEEEecCCCCh---------------HHHHHHHHhhcCCCCEEEEeC-CCCChHHHHHHHCCCC------cEEEEEEE
Confidence 9999999996432 356788899999888776433 3334445555554332 122333
Q ss_pred ---cccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHH-----------
Q 011650 157 ---EFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAF----------- 222 (480)
Q Consensus 157 ---e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~----------- 222 (480)
.+..||...+. .+..+.+|..+.. +.+..+.+.++|+..+- ......|+...+|.|++.|+-
T Consensus 130 ~~a~~~~pg~v~~~--~~~~~~ig~~~~~-~~~~~~~l~~~l~~~~~-~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~ 205 (320)
T 3i83_A 130 IGVTRTAPGEIWHQ--AYGRLMLGNYPGG-VSERVKTLAAAFEEAGI-DGIATENITTARWQKCVWNAAFNPLSVLSGGL 205 (320)
T ss_dssp EEEEEEETTEEEEE--EEEEEEEEESSSC-CCHHHHHHHHHHHHTTS-CEEECSCHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred eceEEcCCCEEEEC--CCCEEEEecCCCC-ccHHHHHHHHHHHhCCC-CceECHHHHHHHHHHHHHHHhhhHHHHHHCCC
Confidence 23345554332 2446778854322 24567888889887542 345567999999999998741
Q ss_pred ---------HHHHHHHHHHHHHHHHHcCCCH-----HHHHHHhcCCCCC-CCccccCCCCccccchhhh--HHHHHHHHH
Q 011650 223 ---------LAQRISSVNAMSALCEATGADV-----SQVSHAIGFDSRI-GPKFLNASVGFGGSCFQKD--ILNLVYICE 285 (480)
Q Consensus 223 ---------~~~~ia~~nE~~~l~~~~gid~-----~~v~~~~~~~~~i-~~~~~~pg~g~gG~c~~kD--~~~l~~~a~ 285 (480)
+.+....+.|+..++++.|++. +.+++.....++. ++++.+- --|.-.-.| ..++++.|+
T Consensus 206 ~g~~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~---~~gr~tEid~i~G~vv~~a~ 282 (320)
T 3i83_A 206 DTLDILSTQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPYKTSMLVDF---EAGQPMETEVILGNAVRAGR 282 (320)
T ss_dssp CHHHHHHHCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSCCCCCHHHHHH---HHTCCCCHHHHTHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhcCCCCCCcHHHHH---HhCCCchHHHHccHHHHHHH
Confidence 3455678999999999999863 3344443322211 1111000 000111111 237788899
Q ss_pred HCCCchhhhHHH
Q 011650 286 CNGLPEVANYWK 297 (480)
Q Consensus 286 ~~g~~~~~~~~~ 297 (480)
++|++ .|+.+
T Consensus 283 ~~gv~--~P~~~ 292 (320)
T 3i83_A 283 RTRVA--IPHLE 292 (320)
T ss_dssp HTTCC--CHHHH
T ss_pred HhCCC--CCHHH
Confidence 99998 55444
No 72
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=1.4e-13 Score=138.10 Aligned_cols=185 Identities=12% Similarity=0.095 Sum_probs=123.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh---
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (480)
+|||+|||+|.||.++|..|.++ |++|++||+++++.+.+.+. ++..+++++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-------------------G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-------------------GFDVSADLEATLQRAA 66 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-------------------TCCEESCHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeeeCCHHHHHHhcc
Confidence 47899999999999999999998 99999999999988876642 1344677777665
Q ss_pred -cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCC
Q 011650 78 -EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNP 156 (480)
Q Consensus 78 -~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
+||+||+|||. ..+.++++++.++ +++++|++.+++.....+.+.+.+.. .. ++..+|
T Consensus 67 ~~aDlVilavP~---------------~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~~----~~-~v~~HP 125 (341)
T 3ktd_A 67 AEDALIVLAVPM---------------TAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNMQ----HR-YVGSHP 125 (341)
T ss_dssp HTTCEEEECSCH---------------HHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTCG----GG-EECEEE
T ss_pred cCCCEEEEeCCH---------------HHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCCC----Cc-EecCCc
Confidence 47999999983 2356777888886 78899999888876665555443321 12 334445
Q ss_pred c----ccccCccccccCCCCeEEEEccCCcchHH--------HHHHHHHHHhccCCCCeEEeCCc-hhHHHHHHHHHHHH
Q 011650 157 E----FLAEGTAINDLFKPDRVLIGGRETPEGMK--------AIKALKDVYAHWVPEDRILCTNL-WSAEVSKLAANAFL 223 (480)
Q Consensus 157 e----~~~~G~a~~~~~~~~~vviG~~~~~~~~~--------~~~~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~ 223 (480)
- ...+..+..+++....+++-.. ...+++ .++.+.++|+.++ ..+..++. ..-..+.++...-.
T Consensus 126 maG~e~sG~~aa~~~Lf~g~~~iltp~-~~~~~e~~~~~~~~~~~~v~~l~~~~G--a~v~~~~~~~HD~~~A~vshlPh 202 (341)
T 3ktd_A 126 MAGTANSGWSASMDGLFKRAVWVVTFD-QLFDGTDINSTWISIWKDVVQMALAVG--AEVVPSRVGPHDAAAARVSHLTH 202 (341)
T ss_dssp CCSCC-CCGGGCCSSTTTTCEEEECCG-GGTSSCCCCHHHHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHH
T ss_pred cccccccchhhhhhHHhcCCeEEEEeC-CCCChhhhccchHHHHHHHHHHHHHcC--CEEEEeCHHHHHHHHHHHhHHHH
Confidence 3 3334344455655544444321 111345 7899999999986 34555554 44566777776555
Q ss_pred HHHHHHH
Q 011650 224 AQRISSV 230 (480)
Q Consensus 224 ~~~ia~~ 230 (480)
.+..+++
T Consensus 203 ~ia~aL~ 209 (341)
T 3ktd_A 203 ILAETLA 209 (341)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 73
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.55 E-value=8.8e-14 Score=137.33 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=142.9
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|+||+||| +|.||.++|..|++. |++|+++|++++. +..+++.+|
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~--------------------------------~~~~~~~~a 66 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA--------------------------------VAESILANA 66 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG--------------------------------GHHHHHTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc--------------------------------CHHHHhcCC
Confidence 35899999 999999999999998 9999999987531 234568899
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||.+ .+.++++++.++++++++|++.+++.....+.+.+.+ . .. ++..+|.+.
T Consensus 67 DvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~--~~-~v~~hP~~g 125 (298)
T 2pv7_A 67 DVVIVSVPIN---------------LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH---T--GA-VLGLHPMFG 125 (298)
T ss_dssp SEEEECSCGG---------------GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---S--SE-EEEEEECSC
T ss_pred CEEEEeCCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---C--CC-EEeeCCCCC
Confidence 9999999853 2577888999999999999988877765555443322 1 12 344456433
Q ss_pred ccCccccccCCCCeEEEE-ccCCcchHHHHHHHHHHHhccCCCCeEEeCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 160 AEGTAINDLFKPDRVLIG-GRETPEGMKAIKALKDVYAHWVPEDRILCTNL-WSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG-~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
.+. ..+....+++. +. +++..+.+.++|+.++ ..++.++. ...++++++.+....+.+++++.+..
T Consensus 126 ~~~----~~~~g~~~~l~~~~----~~~~~~~v~~l~~~~G--~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~-- 193 (298)
T 2pv7_A 126 ADI----ASMAKQVVVRCDGR----FPERYEWLLEQIQIWG--AKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSK-- 193 (298)
T ss_dssp TTC----SCCTTCEEEEEEEE----CGGGTHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--
T ss_pred CCc----hhhcCCeEEEecCC----CHHHHHHHHHHHHHcC--CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 222 12222233333 32 3567889999999875 35555554 45889999999877777777776652
Q ss_pred HHcCCCHHHHHHHhcCCCCCCCccccCCCCccccchhhhHHH-HHHHHHHCCCchhhhHHHHHHHHhhHhHHHHHHHHHH
Q 011650 238 EATGADVSQVSHAIGFDSRIGPKFLNASVGFGGSCFQKDILN-LVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVS 316 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~~~~i~~~~~~pg~g~gG~c~~kD~~~-l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 316 (480)
.|.+..+..+.+. .|| +|... +...+ +.+ ..+|+.....|..... .++.+.+
T Consensus 194 --~g~~~~~~~~la~-------------~~f------~~~~~~~~ria---~~~--p~~~~di~~sn~~~~~-~l~~~~~ 246 (298)
T 2pv7_A 194 --QPINLANLLALSS-------------PIY------RLELAMIGRLF---AQD--AELYADIIMDKSENLA-VIETLKQ 246 (298)
T ss_dssp --SSCCHHHHHHTCC-------------HHH------HHHHHHHHHHH---TSC--HHHHHHHHC----CHH-HHHHHHH
T ss_pred --cCCCHHHHHhhcC-------------HHH------HHHHHHHHHHh---cCC--HHHHHHHHHHCHHHHH-HHHHHHH
Confidence 6777765554332 112 33222 33333 223 4577777777776665 5555555
Q ss_pred Hh
Q 011650 317 SM 318 (480)
Q Consensus 317 ~~ 318 (480)
.+
T Consensus 247 ~l 248 (298)
T 2pv7_A 247 TY 248 (298)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 74
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.55 E-value=3.4e-13 Score=131.89 Aligned_cols=194 Identities=14% Similarity=0.189 Sum_probs=126.7
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC---eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI---EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~---~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+|||+|||+|.||..+|..|+++ |+ +|++||+++++.+.+.+. -+++.+++..++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~------------------~gi~~~~~~~~~~~ 62 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEK------------------CGVHTTQDNRQGAL 62 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHT------------------TCCEEESCHHHHHS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHH------------------cCCEEeCChHHHHh
Confidence 37899999999999999999998 88 999999999999888752 13567788888899
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhh-CCCCcEEEEe-cCCCcccHHHHHHHHHhhcCCCceEEeeC
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADV-SKSDKIVVEK-STVPVKTAEAIEKILMHNSRGINFQILSN 155 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~-l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
+||+||+|||. . .+.++++++.++ ++++++|+.. ++++ .+.+++.+.... .+ +-..
T Consensus 63 ~aDvVilav~p-~--------------~~~~vl~~l~~~~l~~~~iiiS~~agi~---~~~l~~~l~~~~---~v-vr~m 120 (280)
T 3tri_A 63 NADVVVLAVKP-H--------------QIKMVCEELKDILSETKILVISLAVGVT---TPLIEKWLGKAS---RI-VRAM 120 (280)
T ss_dssp SCSEEEECSCG-G--------------GHHHHHHHHHHHHHTTTCEEEECCTTCC---HHHHHHHHTCCS---SE-EEEE
T ss_pred cCCeEEEEeCH-H--------------HHHHHHHHHHhhccCCCeEEEEecCCCC---HHHHHHHcCCCC---eE-EEEe
Confidence 99999999973 1 257788899888 8888777632 2233 345555554311 22 2233
Q ss_pred Cc---ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCch-hHHHHHHH--HHHHHHHHHHH
Q 011650 156 PE---FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLW-SAEVSKLA--ANAFLAQRISS 229 (480)
Q Consensus 156 Pe---~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~-~ae~~Kl~--~N~~~~~~ia~ 229 (480)
|. ....|. ..+..+. ..+++..+.+.++|+.++. .+.+.+.. ....+-+. .+.|.. .+
T Consensus 121 Pn~p~~v~~g~---------~~l~~~~--~~~~~~~~~v~~l~~~iG~--~~~v~~E~~~d~~talsgsgpa~~~---~~ 184 (280)
T 3tri_A 121 PNTPSSVRAGA---------TGLFANE--TVDKDQKNLAESIMRAVGL--VIWVSSEDQIEKIAALSGSGPAYIF---LI 184 (280)
T ss_dssp CCGGGGGTCEE---------EEEECCT--TSCHHHHHHHHHHHGGGEE--EEECSSHHHHHHHHHHTTSHHHHHH---HH
T ss_pred cCChHHhcCcc---------EEEEeCC--CCCHHHHHHHHHHHHHCCC--eEEECCHHHhhHHHHHhccHHHHHH---HH
Confidence 32 222221 2233332 2257899999999999853 44443321 11122222 233333 33
Q ss_pred HHHHHHHHHHcCCCHHHHHHHhc
Q 011650 230 VNAMSALCEATGADVSQVSHAIG 252 (480)
Q Consensus 230 ~nE~~~l~~~~gid~~~v~~~~~ 252 (480)
+.-+...+.+.|++.++..+++.
T Consensus 185 ~eal~~a~v~~Gl~~~~a~~l~~ 207 (280)
T 3tri_A 185 MEALQEAAEQLGLTKETAELLTE 207 (280)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHH
Confidence 34445557789999988887765
No 75
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.53 E-value=1.4e-13 Score=132.93 Aligned_cols=194 Identities=9% Similarity=0.134 Sum_probs=126.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++. |++|.+||+++++.+.+.+.. ++..+++++++++++|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~D 62 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQL------------------ALPYAMSHQDLIDQVD 62 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHH------------------TCCBCSSHHHHHHTCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHc------------------CCEeeCCHHHHHhcCC
Confidence 68999999999999999999987 899999999999988876410 1334667888889999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec-CCCcccHHHHHHHHHhhcCCCceE--EeeCCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS-TVPVKTAEAIEKILMHNSRGINFQ--ILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~--v~~~Pe 157 (480)
+||+|+| |. .+.++++ .+.++++|+..+ ++++. .+.+.+... ..+. +...|.
T Consensus 63 ~Vi~~v~-~~--------------~~~~v~~----~l~~~~~vv~~~~~~~~~---~l~~~~~~~---~~~v~~~p~~~~ 117 (259)
T 2ahr_A 63 LVILGIK-PQ--------------LFETVLK----PLHFKQPIISMAAGISLQ---RLATFVGQD---LPLLRIMPNMNA 117 (259)
T ss_dssp EEEECSC-GG--------------GHHHHHT----TSCCCSCEEECCTTCCHH---HHHHHHCTT---SCEEEEECCGGG
T ss_pred EEEEEeC-cH--------------hHHHHHH----HhccCCEEEEeCCCCCHH---HHHHhcCCC---CCEEEEcCCchH
Confidence 9999998 31 1233333 345777777663 55543 344444321 1221 111222
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
....| ...++.|+. .+++..+.++++|+.++ ..+..+.......+++..+.. .....+++.++..+
T Consensus 118 ~~~~g--------~~~i~~~~~---~~~~~~~~~~~ll~~~G--~~~~~~~~~~d~~~al~g~~~-~~~~~~~~~la~~~ 183 (259)
T 2ahr_A 118 QILQS--------STALTGNAL---VSQELQARVRDLTDSFG--STFDISEKDFDTFTALAGSSP-AYIYLFIEALAKAG 183 (259)
T ss_dssp GGTCE--------EEEEEECTT---CCHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHHTTHH-HHHHHHHHHHHHHH
T ss_pred HHcCc--------eEEEEcCCC---CCHHHHHHHHHHHHhCC--CEEEecHHHccHHHHHhccHH-HHHHHHHHHHHHHH
Confidence 22222 112333331 14788999999999875 244555556667777753221 12345666777779
Q ss_pred HHcCCCHHHHHHHhcC
Q 011650 238 EATGADVSQVSHAIGF 253 (480)
Q Consensus 238 ~~~gid~~~v~~~~~~ 253 (480)
.+.|+|.+++.+++..
T Consensus 184 ~~~Gl~~~~~~~~~~~ 199 (259)
T 2ahr_A 184 VKNGIPKAKALEIVTQ 199 (259)
T ss_dssp HHTTCCHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHH
Confidence 9999999999988764
No 76
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.52 E-value=1.7e-13 Score=128.09 Aligned_cols=186 Identities=13% Similarity=0.094 Sum_probs=125.5
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+||| +|.||..+|..|+++ |++|+++|+++++.+.+.+.. ...+ ....+. .++++++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~--------~~~~---~~~~~~-~~~~~~~~~~~D 66 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEY--------RRIA---GDASIT-GMKNEDAAEACD 66 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHH--------HHHH---SSCCEE-EEEHHHHHHHCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--------cccc---ccCCCC-hhhHHHHHhcCC
Confidence 7999999 999999999999998 999999999999888776420 0000 012355 357777789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC-CCc-----------ccHHHHHHHHHhhcCCC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST-VPV-----------KTAEAIEKILMHNSRGI 148 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~-----------gt~~~l~~~l~~~~~g~ 148 (480)
+||+|+|.+ .+.++++++.+.++ +++|++.++ +++ ...+++++.+.. .
T Consensus 67 ~Vi~~~~~~---------------~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~ 126 (212)
T 1jay_A 67 IAVLTIPWE---------------HAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----E 126 (212)
T ss_dssp EEEECSCHH---------------HHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----S
T ss_pred EEEEeCChh---------------hHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----C
Confidence 999999742 24566777777674 888887776 331 224666665542 2
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhcc-CCCCeEEeCCchhHHHHHHHHHHHHHHHH
Q 011650 149 NFQILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHW-VPEDRILCTNLWSAEVSKLAANAFLAQRI 227 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
.+.-++.|.......... ......+++++. +++..+.+.++|+.+ +. .++..++.+.+.+.|.+.|.+..+..
T Consensus 127 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~g~----~~~~~~~v~~l~~~~~G~-~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 127 KVVSALHTIPAARFANLD-EKFDWDVPVCGD----DDESKKVVMSLISEIDGL-RPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp CEEECCTTCCHHHHHCTT-CCCCEEEEEEES----CHHHHHHHHHHHHHSTTE-EEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred eEEEEccchHHHHhhCcC-CCCCccEEEECC----cHHHHHHHHHHHHHcCCC-CceeccchhHHHHhcchHHHHHHHHH
Confidence 333334465443322111 111113456664 378899999999998 63 45667789999999999998765543
No 77
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.49 E-value=5.9e-13 Score=128.53 Aligned_cols=188 Identities=12% Similarity=0.120 Sum_probs=122.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC----CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS----IEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G----~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+|||+|||+|.||.++|..|+++ | ++|++||+++++ . +++.++++++++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~-----~--------------------g~~~~~~~~~~~ 56 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN-----T--------------------TLNYMSSNEELA 56 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS-----S--------------------SSEECSCHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc-----C--------------------ceEEeCCHHHHH
Confidence 37999999999999999999998 8 799999998754 1 135567888888
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCce-E-Eee
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINF-Q-ILS 154 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~-~-v~~ 154 (480)
+++|+||+|||.. .+.++++++.+.++++.+|.+.+++++. .+.+.+.+. ..+ . +..
T Consensus 57 ~~~D~vi~~v~~~---------------~~~~v~~~l~~~l~~~~vv~~~~gi~~~---~l~~~~~~~---~~~v~~~p~ 115 (262)
T 2rcy_A 57 RHCDIIVCAVKPD---------------IAGSVLNNIKPYLSSKLLISICGGLNIG---KLEEMVGSE---NKIVWVMPN 115 (262)
T ss_dssp HHCSEEEECSCTT---------------THHHHHHHSGGGCTTCEEEECCSSCCHH---HHHHHHCTT---SEEEEEECC
T ss_pred hcCCEEEEEeCHH---------------HHHHHHHHHHHhcCCCEEEEECCCCCHH---HHHHHhCCC---CcEEEECCC
Confidence 9999999999832 1467788888888544455666677654 344444321 111 1 112
Q ss_pred CCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHH--HHHHHHHHHHHHH
Q 011650 155 NPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAA--NAFLAQRISSVNA 232 (480)
Q Consensus 155 ~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~--N~~~~~~ia~~nE 232 (480)
.|.....| ..++.++... +++..+.++++|+.++ .++...+-.....+++.. |.+. ..++..
T Consensus 116 ~p~~~~~g---------~~~~~~~~~~--~~~~~~~~~~ll~~~G--~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~a 179 (262)
T 2rcy_A 116 TPCLVGEG---------SFIYCSNKNV--NSTDKKYVNDIFNSCG--IIHEIKEKDMDIATAISGCGPAYV---YLFIES 179 (262)
T ss_dssp GGGGGTCE---------EEEEEECTTC--CHHHHHHHHHHHHTSE--EEEECCGGGHHHHHHHTTSHHHHH---HHHHHH
T ss_pred hHHHHcCC---------eEEEEeCCCC--CHHHHHHHHHHHHhCC--CEEEeCHHHccHHHHHHccHHHHH---HHHHHH
Confidence 33332222 1234444321 4788999999999875 244444333444555533 3333 455555
Q ss_pred HHHHHHHcCCCHHHHHHHhc
Q 011650 233 MSALCEATGADVSQVSHAIG 252 (480)
Q Consensus 233 ~~~l~~~~gid~~~v~~~~~ 252 (480)
+...+.+.|++.++..+.+.
T Consensus 180 l~~~~~~~Gl~~~~~~~~~~ 199 (262)
T 2rcy_A 180 LIDAGVKNGLSRELSKNLVL 199 (262)
T ss_dssp HHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHH
Confidence 66667899999988777665
No 78
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.49 E-value=2.9e-13 Score=130.80 Aligned_cols=190 Identities=9% Similarity=0.146 Sum_probs=118.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||..+|..|++. | ++|++||+++++++.+.+. -++++++++++++ ++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~------------------~g~~~~~~~~~~~-~~D 59 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKE------------------LGVETSATLPELH-SDD 59 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHH------------------TCCEEESSCCCCC-TTS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHh------------------cCCEEeCCHHHHh-cCC
Confidence 7999999999999999999998 8 9999999999999887652 0245566776767 999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEe-cCCCcccHHHHHHHHHhhcCCCceEEe-e-CCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEK-STVPVKTAEAIEKILMHNSRGINFQIL-S-NPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~v~-~-~Pe 157 (480)
+||+||| +. .+.++++.+.+ + +++|+.. |++++ +.+.+.+.+ +..+.-+ . .|.
T Consensus 60 ~vi~~v~-~~--------------~~~~v~~~l~~--~-~~ivv~~~~g~~~---~~l~~~~~~---~~~~v~~~~~~~~ 115 (263)
T 1yqg_A 60 VLILAVK-PQ--------------DMEAACKNIRT--N-GALVLSVAAGLSV---GTLSRYLGG---TRRIVRVMPNTPG 115 (263)
T ss_dssp EEEECSC-HH--------------HHHHHHTTCCC--T-TCEEEECCTTCCH---HHHHHHTTS---CCCEEEEECCGGG
T ss_pred EEEEEeC-ch--------------hHHHHHHHhcc--C-CCEEEEecCCCCH---HHHHHHcCC---CCcEEEEcCCHHH
Confidence 9999998 31 24555555544 4 7888876 66665 445444432 1122111 1 232
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeC-CchhHHHHHHH--HHHHHHHHHHHHHHHH
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCT-NLWSAEVSKLA--ANAFLAQRISSVNAMS 234 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~--~N~~~~~~ia~~nE~~ 234 (480)
....|.. .++.|+. .+++..+.++++|+.++ ..++.. +-.-...+-+. .+.+. ..++..+.
T Consensus 116 ~~~~g~~--------~i~~~~~---~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~al~g~~~~~~---~~~~~~l~ 179 (263)
T 1yqg_A 116 KIGLGVS--------GMYAEAE---VSETDRRIADRIMKSVG--LTVWLDDEEKMHGITGISGSGPAYV---FYLLDALQ 179 (263)
T ss_dssp GGTCEEE--------EEECCTT---SCHHHHHHHHHHHHTTE--EEEECSSTTHHHHHHHHTTSHHHHH---HHHHHHHH
T ss_pred HHcCceE--------EEEcCCC---CCHHHHHHHHHHHHhCC--CEEEeCChhhccHHHHHHccHHHHH---HHHHHHHH
Confidence 2222211 2333321 14778999999999875 244444 21112222221 12222 33444445
Q ss_pred HHHHHcCCCHHHHHHHhc
Q 011650 235 ALCEATGADVSQVSHAIG 252 (480)
Q Consensus 235 ~l~~~~gid~~~v~~~~~ 252 (480)
..+++.|++.+++.+.+.
T Consensus 180 e~~~~~G~~~~~~~~~~~ 197 (263)
T 1yqg_A 180 NAAIRQGFDMAEARALSL 197 (263)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHH
Confidence 558899999988887764
No 79
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.47 E-value=7e-13 Score=145.15 Aligned_cols=204 Identities=16% Similarity=0.175 Sum_probs=142.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-------hcCCCEEEecCHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-------CRGKNLFFSTDVE 73 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-------~~~~~l~~t~d~~ 73 (480)
|.||+|||+|.||..+|..++.+ |++|+++|++++.++...+... ..++..... ....+++++++.+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIIT----FTLEKEASRAHQNGQASAKPKLRFSSSTK 389 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHH----HHHHHHHHHHHTTTCCCCCCCEEEESCGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHH----HHHHHHHHhccccchhhhhhhhcccCcHH
Confidence 46899999999999999999998 9999999999988765443100 001111111 1235688999987
Q ss_pred HHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEE-EEecCCCcccHHHHHHHHHhhcC--CCce
Q 011650 74 KHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIV-VEKSTVPVKTAEAIEKILMHNSR--GINF 150 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iV-i~~STv~~gt~~~l~~~l~~~~~--g~~~ 150 (480)
+ +++||+||.||++ +.+++ +++++++.+++++++|+ .++||+++.. ++..+..... |.+|
T Consensus 390 ~-l~~aDlVIEAV~E-----------~l~iK--~~vf~~le~~~~~~aIlASNTSsl~i~~---ia~~~~~p~r~ig~HF 452 (742)
T 3zwc_A 390 E-LSTVDLVVEAVFE-----------DMNLK--KKVFAELSALCKPGAFLCTNTSALNVDD---IASSTDRPQLVIGTHF 452 (742)
T ss_dssp G-GGSCSEEEECCCS-----------CHHHH--HHHHHHHHHHSCTTCEEEECCSSSCHHH---HHTTSSCGGGEEEEEC
T ss_pred H-HhhCCEEEEeccc-----------cHHHH--HHHHHHHhhcCCCCceEEecCCcCChHH---HHhhcCCccccccccc
Confidence 6 8999999999985 34555 78999999999999988 4556777553 2211111110 2222
Q ss_pred EEeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHH
Q 011650 151 QILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSV 230 (480)
Q Consensus 151 ~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
|+|....+- -.||- +..| ++++++.+.++.+.+++ .++.+.|.. .++.| .+...++
T Consensus 453 ---fnP~~~m~L---------VEvi~-g~~T--s~e~~~~~~~~~~~lgK-~pV~vkd~p-----GFi~N---Ri~~~~~ 508 (742)
T 3zwc_A 453 ---FSPAHVMRL---------LEVIP-SRYS--SPTTIATVMSLSKKIGK-IGVVVGNCY-----GFVGN---RMLAPYY 508 (742)
T ss_dssp ---CSSTTTCCE---------EEEEE-CSSC--CHHHHHHHHHHHHHTTC-EEEECCCST-----TTTHH---HHHHHHH
T ss_pred ---cCCCCCCce---------EEEec-CCCC--CHHHHHHHHHHHHHhCC-CCcccCCCC-----CccHH---HHhhHHH
Confidence 466544331 13554 4434 68999999999999874 566655433 57777 5678999
Q ss_pred HHHHHHHHHcCCCHHHHHHHhc
Q 011650 231 NAMSALCEATGADVSQVSHAIG 252 (480)
Q Consensus 231 nE~~~l~~~~gid~~~v~~~~~ 252 (480)
+|...+.++ |+++.++.+++.
T Consensus 509 ~ea~~l~~e-G~~~~~id~a~~ 529 (742)
T 3zwc_A 509 NQGFFLLEE-GSKPEDVDGVLE 529 (742)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHH
Confidence 999998886 799999999874
No 80
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.46 E-value=3.2e-12 Score=131.47 Aligned_cols=218 Identities=15% Similarity=0.089 Sum_probs=129.9
Q ss_pred CceEEEECCChhHHHHHHHHHH-cCCCCeEEEEe---CCHHHHHH-HHcCCCCC--CCCChHHHHHHhcCCCE-EEecCH
Q 011650 1 MVKICCIGAGYVGGPTMAVIAL-KCPSIEVAVVD---ISVPRINA-WNSDQLPI--YEPGLEEVVKQCRGKNL-FFSTDV 72 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~-~~~G~~V~~~D---~~~~~v~~-l~~g~~~~--~e~~l~~~~~~~~~~~l-~~t~d~ 72 (480)
||||+|||+|+||+.+|..|++ + |++|++|| +++++++. ++++...+ .+++.+.. ....++ .+++|+
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQT---EVKSRPKVITKDP 76 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEE---EEEECCSEEESCH
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccc---eeeccceEEeCCH
Confidence 5899999999999999999987 5 89999999 88888888 45433111 11110000 000123 378899
Q ss_pred HHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEE
Q 011650 73 EKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQI 152 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v 152 (480)
++++.++|+||+|||++. +.+++++|.++++++++|+.. +...|......+.+.+.... ....
T Consensus 77 ~~a~~~aD~Vilav~~~~---------------~~~v~~~l~~~l~~~~ivv~~-~~~~G~~~~~~~~l~~~~~~-~v~~ 139 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFA---------------HEGYFQAMAPYVQDSALIVGL-PSQAGFEFQCRDILGDKAAA-VSMM 139 (404)
T ss_dssp HHHHTTCSEEEECSCGGG---------------HHHHHHHHTTTCCTTCEEEET-TCCTTHHHHHHHHHGGGGGT-SEEE
T ss_pred HHHhCCCCEEEEeCchHH---------------HHHHHHHHHhhCCCCcEEEEc-CCCccHHHHHHHHHHhcCCC-eEEE
Confidence 888899999999998642 367889999999988887753 22235333333444432111 1111
Q ss_pred e--eCCcc---cccCccccccCCCCeEEEEccCC--cchHHHHHHHHHHHhccCCCC-eEEeCCchhHHHH---------
Q 011650 153 L--SNPEF---LAEGTAINDLFKPDRVLIGGRET--PEGMKAIKALKDVYAHWVPED-RILCTNLWSAEVS--------- 215 (480)
Q Consensus 153 ~--~~Pe~---~~~G~a~~~~~~~~~vviG~~~~--~~~~~~~~~~~~l~~~~~~~~-~v~~~~~~~ae~~--------- 215 (480)
. ..|.. ..||.++.......++.+|.... ...++..+.++++|.. . .....|+...++.
T Consensus 140 ~~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~di~~~~l~~N~~~~~~~ 215 (404)
T 3c7a_A 140 SFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQMLHGAE----PVFRLAKHFLEMLIMSYSFVHPAI 215 (404)
T ss_dssp EESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHHHCSS----SEEEECSCHHHHHHTTCTTHHHHH
T ss_pred EecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHHhCCC----CceeEcCCEeeeeecCCceeccHH
Confidence 1 23322 34674444444445666775422 2234455555555531 1 1123344322221
Q ss_pred ------H-----------HHHH---HHHHHHHHHHHHHHHHHHHc-----CCCH
Q 011650 216 ------K-----------LAAN---AFLAQRISSVNAMSALCEAT-----GADV 244 (480)
Q Consensus 216 ------K-----------l~~N---~~~~~~ia~~nE~~~l~~~~-----gid~ 244 (480)
+ +..| ..+.+...++.|+.++++++ |+++
T Consensus 216 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~ 269 (404)
T 3c7a_A 216 LFGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDL 269 (404)
T ss_dssp HHHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC
T ss_pred HHHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Confidence 0 2232 45577788999999999999 9876
No 81
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.43 E-value=1.2e-12 Score=122.56 Aligned_cols=155 Identities=17% Similarity=0.114 Sum_probs=106.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.++|..|+++ |++|++||++++ ++++||
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~-------------------------------------~~~~aD 59 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ-------------------------------------ATTLGE 59 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC-------------------------------------CSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH-------------------------------------HhccCC
Confidence 48999999999999999999998 999999998642 256899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC-CC-cc-------c----HHHHHHHHHhhcCC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST-VP-VK-------T----AEAIEKILMHNSRG 147 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~-~g-------t----~~~l~~~l~~~~~g 147 (480)
+||+|||+ ..+.++++++.+.++ +++|++.|+ ++ ++ + .+.+++.+. +
T Consensus 60 ~vi~av~~---------------~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~----~ 119 (209)
T 2raf_A 60 IVIMAVPY---------------PALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP----D 119 (209)
T ss_dssp EEEECSCH---------------HHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT----T
T ss_pred EEEEcCCc---------------HHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC----C
Confidence 99999983 235677888888888 888887766 23 12 3 333443332 1
Q ss_pred CceE----EeeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHH
Q 011650 148 INFQ----ILSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAF 222 (480)
Q Consensus 148 ~~~~----v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~ 222 (480)
..+. ..++|.+..+... . ..+..+++++. +++..+.++++|+.++. .++..++++.+.+.|.+.|.+
T Consensus 120 ~~vv~~~~~~~~p~~~~~~~~--g-~~~~~~~~~g~----~~~~~~~v~~ll~~~G~-~~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 120 SQVLKAFNTTFAATLQSGQVN--G-KEPTTVLVAGN----DDSAKQRFTRALADSPL-EVKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp SEEEECSTTSCHHHHHHSEET--T-TEECEEEEEES----CHHHHHHHHHHTTTSSC-EEEEEESGGGHHHHHHHHHHH
T ss_pred CcEEEeeecccHhhccccccC--C-CCCceeEEcCC----CHHHHHHHHHHHHHcCC-ceEeCCCHhHHHHhcchHHHH
Confidence 1221 1125555433211 1 01224556765 46889999999998762 456778899999999988854
No 82
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.38 E-value=2.9e-12 Score=126.10 Aligned_cols=192 Identities=11% Similarity=0.079 Sum_probs=121.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-hcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-REAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~aD 80 (480)
|||+|||+|.||+.+|..|+++ |++|++|+++++.++..... +. ....++.+..+++ ..+|
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~-------g~---------~~~~~~~~~~~~~~~~~D 64 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTVP-------HA---------PAQDIVVKGYEDVTNTFD 64 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESST-------TS---------CCEEEEEEEGGGCCSCEE
T ss_pred cEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEecC-------Ce---------eccceecCchHhcCCCCC
Confidence 7999999999999999999998 89999999986543211110 10 0122333444444 7899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEee-CCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILS-NPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~-~Pe~~ 159 (480)
+||+|||+. .+.++++.+.+.++++++|+... ...+..+. +..... -..+.+ +-.+.
T Consensus 65 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~~-nGi~~~~~----~~~~~v--~~g~~~~~a~~~ 122 (294)
T 3g17_A 65 VIIIAVKTH---------------QLDAVIPHLTYLAHEDTLIILAQ-NGYGQLEH----IPFKNV--CQAVVYISGQKK 122 (294)
T ss_dssp EEEECSCGG---------------GHHHHGGGHHHHEEEEEEEEECC-SSCCCGGG----CCCSCE--EECEEEEEEEEE
T ss_pred EEEEeCCcc---------------CHHHHHHHHHHhhCCCCEEEEec-cCcccHhh----CCCCcE--EEEEEEEEEEEc
Confidence 999999852 24678888999888887776433 22233221 211100 000111 11233
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHH-----------------
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAF----------------- 222 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~----------------- 222 (480)
.||.... .+..+.++ . .+..+.+.++|+.-+ .......|+...+|.|++.|+-
T Consensus 123 ~pg~v~~---~~~~~~~~-~-----~~~~~~l~~~l~~~~-~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~ 192 (294)
T 3g17_A 123 GDVVTHF---RDYQLRIQ-D-----NALTRQFRDLVQDSQ-IDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHN 192 (294)
T ss_dssp TTEEEEE---EEEEEEEE-C-----SHHHHHHHHHTTTSS-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGS
T ss_pred CCCEEEE---CCCEEecC-c-----cHHHHHHHHHHHhCC-CceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcC
Confidence 4554421 13455554 2 346778888888753 1345568999999999999872
Q ss_pred ---HHHHHHHHHHHHHHHHHcCCC
Q 011650 223 ---LAQRISSVNAMSALCEATGAD 243 (480)
Q Consensus 223 ---~~~~ia~~nE~~~l~~~~gid 243 (480)
+.+....+.|+.+++++.|++
T Consensus 193 ~~~~~l~~~~~~E~~~va~a~G~~ 216 (294)
T 3g17_A 193 PEIRILCRQLLLDGCRVAQAEGLN 216 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 334456889999999999976
No 83
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.36 E-value=1.3e-12 Score=123.25 Aligned_cols=166 Identities=14% Similarity=0.146 Sum_probs=104.3
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+|.||..+|..|+++ |++|++ +|+++++++++.+.. +....+++ .++++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~-----------------g~~~~~~~-~~~~~~a 82 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRF-----------------GASVKAVE-LKDALQA 82 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHH-----------------TTTEEECC-HHHHTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHh-----------------CCCcccCh-HHHHhcC
Confidence 57999999999999999999998 999999 999999888876420 11122344 4458999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCC------cc------cHHHHHHHHHhhcCC
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVP------VK------TAEAIEKILMHNSRG 147 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~------~g------t~~~l~~~l~~~~~g 147 (480)
|+||+|||.. .+.++++++.+ + ++++|+..++.- +. +.+.+++.+...
T Consensus 83 DvVilavp~~---------------~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 142 (220)
T 4huj_A 83 DVVILAVPYD---------------SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGA--- 142 (220)
T ss_dssp SEEEEESCGG---------------GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTC---
T ss_pred CEEEEeCChH---------------HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCC---
Confidence 9999999732 24566666665 4 477777655322 11 445565555321
Q ss_pred CceEEee--CCcc-cccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHH
Q 011650 148 INFQILS--NPEF-LAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEV 214 (480)
Q Consensus 148 ~~~~v~~--~Pe~-~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~ 214 (480)
.+.-++ .|.. ...|..... .+..+++++. ++++.+.++++|+.++. .++..++++.|.+
T Consensus 143 -~vv~~~~~~~~~v~~~g~~~~~--~~~~v~~~g~----~~~~~~~v~~l~~~~G~-~~~~~G~l~~a~~ 204 (220)
T 4huj_A 143 -KVVKAFNTLPAAVLAADPDKGT--GSRVLFLSGN----HSDANRQVAELISSLGF-APVDLGTLAASGP 204 (220)
T ss_dssp -EEEEESCSSCHHHHTSCSBCSS--CEEEEEEEES----CHHHHHHHHHHHHHTTC-EEEECCSHHHHHH
T ss_pred -CEEECCCCCCHHHhhhCcccCC--CCeeEEEeCC----CHHHHHHHHHHHHHhCC-CeEeeCChhhcch
Confidence 121111 1111 111211111 1234556665 48899999999999863 4566677666644
No 84
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.27 E-value=3.8e-11 Score=112.65 Aligned_cols=170 Identities=16% Similarity=0.066 Sum_probs=104.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||..+|..|++. |++|+++|+++++.+.+.+. +++.+ +.+++++++|
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-------------------g~~~~-~~~~~~~~~D 85 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPS-------------------AAQVT-FQEEAVSSPE 85 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBT-------------------TSEEE-EHHHHTTSCS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCcee-cHHHHHhCCC
Confidence 47999999999999999999998 89999999999988877642 13334 6677789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccH-H---HHHHHHHhhcCCCceEEeeCC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA-E---AIEKILMHNSRGINFQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~-~---~l~~~l~~~~~g~~~~v~~~P 156 (480)
+||+|+|.. .. .++++ +.+.+ ++++|++.|+..+-.. + ...+.+++...+..+.-.+++
T Consensus 86 vVi~av~~~-~~--------------~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~ 148 (215)
T 2vns_A 86 VIFVAVFRE-HY--------------SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNV 148 (215)
T ss_dssp EEEECSCGG-GS--------------GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTT
T ss_pred EEEECCChH-HH--------------HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEecccc
Confidence 999999842 11 11222 44445 6788887776543211 0 112233332211122111232
Q ss_pred ccc---ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHH
Q 011650 157 EFL---AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLA 218 (480)
Q Consensus 157 e~~---~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~ 218 (480)
... .++.. . .....++.|+ +++..+.++++|+.++. ..+..++++.+...+.+
T Consensus 149 ~~~~~~~~~~~--~-g~~~~~~~g~-----~~~~~~~v~~ll~~~G~-~~~~~g~~~~~~~~e~~ 204 (215)
T 2vns_A 149 ISAWTLQAGPR--D-GNRQVPICGD-----QPEAKRAVSEMALAMGF-MPVDMGSLASAWEVEAM 204 (215)
T ss_dssp BCHHHHHTCSC--S-SCCEEEEEES-----CHHHHHHHHHHHHHTTC-EEEECCSGGGHHHHHHS
T ss_pred ccHhHhccccc--C-CceeEEEecC-----CHHHHHHHHHHHHHcCC-ceEeecchhhhhHhhhh
Confidence 111 12211 1 1111344443 37889999999999863 45666788888777643
No 85
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.27 E-value=2.7e-11 Score=121.56 Aligned_cols=196 Identities=16% Similarity=0.110 Sum_probs=118.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHH-HHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPR-INAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~-v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
.|||+|||+|.||.++|..|++. |++|+++|+++++ .+...+ .++.++ ++++++++|
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~-------------------~G~~~~-~~~e~~~~a 73 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEA-------------------HGLKVA-DVKTAVAAA 73 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHH-------------------TTCEEE-CHHHHHHTC
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHH-------------------CCCEEc-cHHHHHhcC
Confidence 37899999999999999999998 8999999998765 333332 123445 777888999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHH-HHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc-C-CCceEEeeCC
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAAR-MIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS-R-GINFQILSNP 156 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~-~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~-~-g~~~~v~~~P 156 (480)
|+||+|||.. ...++++ ++.++++++++|++.+++ .. .+++.. . +.++ +..+|
T Consensus 74 DvVilavp~~---------------~~~~v~~~~i~~~l~~~~ivi~~~gv----~~----~~~~~~~~~~~~v-v~~~P 129 (338)
T 1np3_A 74 DVVMILTPDE---------------FQGRLYKEEIEPNLKKGATLAFAHGF----SI----HYNQVVPRADLDV-IMIAP 129 (338)
T ss_dssp SEEEECSCHH---------------HHHHHHHHHTGGGCCTTCEEEESCCH----HH----HTTSSCCCTTCEE-EEEEE
T ss_pred CEEEEeCCcH---------------HHHHHHHHHHHhhCCCCCEEEEcCCc----hh----HHHhhcCCCCcEE-EeccC
Confidence 9999999842 2356777 888899999988865432 11 112111 1 2333 33455
Q ss_pred cccccCccccccC----CCCeEEEEccCCcchHHHHHHHHHHHhccCCCCe--EEeCCch-hHHHHHHHHHH-HHHHHHH
Q 011650 157 EFLAEGTAINDLF----KPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDR--ILCTNLW-SAEVSKLAANA-FLAQRIS 228 (480)
Q Consensus 157 e~~~~G~a~~~~~----~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~--v~~~~~~-~ae~~Kl~~N~-~~~~~ia 228 (480)
..|+.+...++ ..+.++.-+.. .++++.+.+.++++.++. .. +..++.. ..+...+.+++ +.....+
T Consensus 130 --~gp~~a~~~l~~~G~g~~~ii~~~~~--~~~~a~~~~~~l~~~lG~-~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~ 204 (338)
T 1np3_A 130 --KAPGHTVRSEFVKGGGIPDLIAIYQD--ASGNAKNVALSYACGVGG-GRTGIIETTFKDETETDLFGEQAVLCGGCVE 204 (338)
T ss_dssp --SSCSHHHHHHHHTTCCCCEEEEEEEC--SSSCHHHHHHHHHHHTTH-HHHCEEECCHHHHHHHHHHHHHHTTTHHHHH
T ss_pred --CCCchhHHHHHhccCCCeEEEEecCC--CCHHHHHHHHHHHHHcCC-CccceEeechhcccchHHHHHHHHHhhhHHH
Confidence 34444433222 22333221111 135678889999998752 13 5556543 45566666552 1122223
Q ss_pred HHHHHHHHHHHcCCCHHHH
Q 011650 229 SVNAMSALCEATGADVSQV 247 (480)
Q Consensus 229 ~~nE~~~l~~~~gid~~~v 247 (480)
++........+.|+++++.
T Consensus 205 ~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 205 LVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHH
Confidence 3333333344678777543
No 86
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.24 E-value=4.1e-11 Score=119.84 Aligned_cols=134 Identities=15% Similarity=0.214 Sum_probs=96.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..|+.. |++|++||+++++.+...+ .++..+ ++++++++||+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~~-~l~e~l~~aDv 213 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAE-------------------FQAEFV-STPELAAQSDF 213 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHT-------------------TTCEEC-CHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHh-------------------cCceeC-CHHHHHhhCCE
Confidence 6899999999999999999987 9999999998765554432 123444 78888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC---CCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR---GINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|......+ ..+ +.+.+.+++++++|+.|+.++...+.+.+.+++... +.|+ +.||.
T Consensus 214 Vi~~vp~~~~t~~-----~i~--------~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~ep 277 (330)
T 2gcg_A 214 IVVACSLTPATEG-----LCN--------KDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDV---TSPEP 277 (330)
T ss_dssp EEECCCCCTTTTT-----CBS--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEEeCCCChHHHH-----hhC--------HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCC---CCCCC
Confidence 9999986532211 111 345567899999999999988888888888876432 2343 57776
Q ss_pred cccCccccccCCCCeEEE
Q 011650 159 LAEGTAINDLFKPDRVLI 176 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vvi 176 (480)
..+++. ++..+.+++
T Consensus 278 l~~~~~---l~~~~nvi~ 292 (330)
T 2gcg_A 278 LPTNHP---LLTLKNCVI 292 (330)
T ss_dssp CCTTCG---GGGCTTEEE
T ss_pred CCCCCh---hhcCCCEEE
Confidence 655544 344455655
No 87
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.19 E-value=1.6e-11 Score=119.66 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=105.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+|.||..+|..|+++ ++| .+||+++++.+.+.+.. +. .+++++++++++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~-----------------g~--~~~~~~~~~~~~ 59 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVY-----------------GG--KAATLEKHPELN 59 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHT-----------------CC--CCCSSCCCCC--
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHc-----------------CC--ccCCHHHHHhcC
Confidence 47999999999999999998764 788 59999999988776410 11 345666667889
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||... +.++++++. +++++|++.|+..+... +++. +.....|...
T Consensus 60 DvVilav~~~~---------------~~~v~~~l~---~~~~ivi~~s~~~~~~~------l~~~-----~~~~~~p~~~ 110 (276)
T 2i76_A 60 GVVFVIVPDRY---------------IKTVANHLN---LGDAVLVHCSGFLSSEI------FKKS-----GRASIHPNFS 110 (276)
T ss_dssp -CEEECSCTTT---------------HHHHHTTTC---CSSCCEEECCSSSCGGG------GCSS-----SEEEEEECSC
T ss_pred CEEEEeCChHH---------------HHHHHHHhc---cCCCEEEECCCCCcHHH------HHHh-----hccccchhhh
Confidence 99999998531 244444443 56788887775433321 1111 1122233332
Q ss_pred ccC--ccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchh---HHHHHHHHHHHHHHHHHHHHHHH
Q 011650 160 AEG--TAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWS---AEVSKLAANAFLAQRISSVNAMS 234 (480)
Q Consensus 160 ~~G--~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~---ae~~Kl~~N~~~~~~ia~~nE~~ 234 (480)
.+| .....+...+ +++++. ++..+.++++++.++. .++.+..... ....+++.|... .+++|+.
T Consensus 111 ~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~l~~~lG~-~~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~ 179 (276)
T 2i76_A 111 FSSLEKALEMKDQIV-FGLEGD-----ERGLPIVKKIAEEISG-KYFVIPSEKKKAYHLAAVIASNFPV----ALAYLSK 179 (276)
T ss_dssp C--CTTGGGCGGGCC-EEECCC-----TTTHHHHHHHHHHHCS-CEEECCGGGHHHHHHHHHHHHTTHH----HHHHHHH
T ss_pred cCCCchhHHHhCCCe-EEEEeC-----hHHHHHHHHHHHHhCC-CEEEECHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 222 1111122222 344543 4458889999999863 3454443221 234577777432 3567777
Q ss_pred HHHHHcCCCHH
Q 011650 235 ALCEATGADVS 245 (480)
Q Consensus 235 ~l~~~~gid~~ 245 (480)
.++++.|++..
T Consensus 180 ~~~~~~Gl~~~ 190 (276)
T 2i76_A 180 RIYTLLGLDEP 190 (276)
T ss_dssp HHHHTTTCSCH
T ss_pred HHHHHcCCChH
Confidence 89999999876
No 88
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.18 E-value=6e-11 Score=117.48 Aligned_cols=201 Identities=15% Similarity=0.068 Sum_probs=115.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+.+|..|+ + |++|+++++++++++.+++.+..+..++.. . ...+..+. ++...+|
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~-~-----~~~~~~~~---~~~~~~D 69 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEE-F-----RADCSADT---SINSDFD 69 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEE-E-----EECCEEES---SCCSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCe-e-----cccccccc---cccCCCC
Confidence 389999999999999999999 8 999999999999988887633222111100 0 00111111 2357899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCce--EEee-CCc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINF--QILS-NPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~--~v~~-~Pe 157 (480)
+||+|||.. .+.++++.+.+. .+++ |+. -....+..+. +++..+...+ .+++ +-.
T Consensus 70 ~vilavK~~---------------~~~~~l~~l~~~-~~~~-ivs-~~nGi~~~e~----l~~~~~~~~vl~g~~~~~a~ 127 (307)
T 3ego_A 70 LLVVTVKQH---------------QLQSVFSSLERI-GKTN-ILF-LQNGMGHIHD----LKDWHVGHSIYVGIVEHGAV 127 (307)
T ss_dssp EEEECCCGG---------------GHHHHHHHTTSS-CCCE-EEE-CCSSSHHHHH----HHTCCCSCEEEEEEECCEEE
T ss_pred EEEEEeCHH---------------HHHHHHHHhhcC-CCCe-EEE-ecCCccHHHH----HHHhCCCCcEEEEEEeeceE
Confidence 999999842 146677777664 4555 432 2333343333 3332111111 1222 223
Q ss_pred ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHH---------------
Q 011650 158 FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAF--------------- 222 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~--------------- 222 (480)
+..||...+.. ..++.+|..+.. .+..+.+.++|+..+ .......|+....|.|++-|+-
T Consensus 128 ~~~pg~v~~~~--~g~~~iG~~~~~--~~~~~~l~~~l~~ag-~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l 202 (307)
T 3ego_A 128 RKSDTAVDHTG--LGAIKWSAFDDA--EPDRLNILFQHNHSD-FPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGEL 202 (307)
T ss_dssp ECSSSEEEEEE--CCCEEEEECTTC--CGGGGTTTTSSCCTT-SCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHH
T ss_pred ECCCCEEEEee--eeeEEEEeCCCC--cHHHHHHHHHhhhCC-CCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchh
Confidence 44566654332 235678875332 122333334444322 1234557999999999999852
Q ss_pred ------HHHHHHHHHHHHHHHHHc
Q 011650 223 ------LAQRISSVNAMSALCEAT 240 (480)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~ 240 (480)
+.+....+.|+..++...
T Consensus 203 ~~~~~~~~l~~~l~~E~~~va~~~ 226 (307)
T 3ego_A 203 LTTPAYLAFMKLVFQEACRILKLE 226 (307)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHTCS
T ss_pred hcChhHHHHHHHHHHHHHHHHhcc
Confidence 334445677777776543
No 89
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.17 E-value=8.4e-11 Score=117.75 Aligned_cols=132 Identities=20% Similarity=0.182 Sum_probs=93.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..|+.. |++|++||++++. +...+. ++.+ +++++++++||+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~~~l~~aDv 207 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVEREL-------------------NAEF-KPLEDLLRESDF 207 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHH-------------------CCEE-CCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhc-------------------Cccc-CCHHHHHhhCCE
Confidence 6899999999999999999987 9999999998766 333210 1233 478888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC---CCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR---GINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|..... ..+. .+.+.+.+++++++|+.|+.++...+.+.+.+++... +.|+ +.||.
T Consensus 208 Vil~vp~~~~t-----------~~~i--~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~EP 271 (334)
T 2dbq_A 208 VVLAVPLTRET-----------YHLI--NEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDV---FEEEP 271 (334)
T ss_dssp EEECCCCCTTT-----------TTCB--CHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEECCCCChHH-----------HHhh--CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecC---CCCCC
Confidence 99999875422 1111 1345667899999999999888888888888876321 2343 56663
Q ss_pred cccCccccccCCCCeEEE
Q 011650 159 LAEGTAINDLFKPDRVLI 176 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vvi 176 (480)
.+...++..+++++
T Consensus 272 ----~~~~~L~~~~~vi~ 285 (334)
T 2dbq_A 272 ----YYNEELFKLDNVVL 285 (334)
T ss_dssp ----CCCHHHHHCTTEEE
T ss_pred ----CCCchhhcCCCEEE
Confidence 22344555566765
No 90
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.12 E-value=1.7e-09 Score=102.02 Aligned_cols=156 Identities=9% Similarity=0.009 Sum_probs=100.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.|||+|||+|.||.+||..|.++ ||+|++||+. ++ +.+||
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~--G~~V~~~~~~-------------------------------------~~-~~~aD 45 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV--GHYVTVLHAP-------------------------------------ED-IRDFE 45 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT--TCEEEECSSG-------------------------------------GG-GGGCS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC--CCEEEEecCH-------------------------------------HH-hccCC
Confidence 38999999999999999999998 9999999872 11 46789
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC-CcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV-PVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+|||.. .+.++++++.++++++++|+++|+. +....+.+ .+.+ . .++..+|-+.
T Consensus 46 --ilavP~~---------------ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~----~~~g--~-~fvg~HPm~g 101 (232)
T 3dfu_A 46 --LVVIDAH---------------GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPL----ETSG--G-IVMSAHPIGQ 101 (232)
T ss_dssp --EEEECSS---------------CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHH----HHTT--C-EEEEEEEEET
T ss_pred --EEEEcHH---------------HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHH----HhCC--C-cEEEeeeCCC
Confidence 9999853 2577888999999999999987643 32222222 2222 2 3456677642
Q ss_pred ccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011650 160 AEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLAANAFLAQRISSVNAMSALCEA 239 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~ 239 (480)
. +.++.++ ++++.+.++++++.++. .++.++...-... ++.-...-..++++++..++.+.
T Consensus 102 ~-----------~~~i~a~-----d~~a~~~l~~L~~~lG~--~vv~~~~~~hd~~-~AAvsh~nhLv~L~~~A~~ll~~ 162 (232)
T 3dfu_A 102 D-----------RWVASAL-----DELGETIVGLLVGELGG--SIVEIADDKRAQL-AAALTYAGFLSTLQRDASYFLDE 162 (232)
T ss_dssp T-----------EEEEEES-----SHHHHHHHHHHHHHTTC--EECCCCGGGHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----------ceeeeCC-----CHHHHHHHHHHHHHhCC--EEEEeCHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1344443 37789999999999863 5555554321111 11111123445566666666633
No 91
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=99.11 E-value=2.2e-10 Score=113.50 Aligned_cols=122 Identities=22% Similarity=0.225 Sum_probs=85.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+.+..|++|+++|+++++++.+..... ..... .....++++++|+++ +++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~----~~~~~---~~~~~~i~~t~d~~~-l~~aDv 72 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY----ESGPV---GLFDTKVTGSNDYAD-TANSDI 72 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH----TTHHH---HTCCCEEEEESCGGG-GTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHH----hhhhc---ccCCcEEEECCCHHH-HCCCCE
Confidence 7999999999999999999985237999999999988876542100 00000 011245788889877 999999
Q ss_pred EEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 82 VFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+|+|+|.... ....|+ +.++++.+.+.++.+ +.+|++ -|.|+++...+
T Consensus 73 Viiav~~p~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~viv-~tNP~~~~~~~ 127 (310)
T 1guz_A 73 VIITAGLPRKPG----MTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIV-VSNPLDIMTHV 127 (310)
T ss_dssp EEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHCS-SCEEEE-CCSSHHHHHHH
T ss_pred EEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEE-EcCchHHHHHH
Confidence 999999986541 113454 666788888888864 454444 37898886443
No 92
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.11 E-value=1.5e-10 Score=116.43 Aligned_cols=109 Identities=15% Similarity=0.094 Sum_probs=81.7
Q ss_pred ceEEEECCChhHHHHHHHHH-HcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIA-LKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La-~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+. .. |++|++||++++..+...+ .++.++++++++++.||
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aD 222 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKA-------------------LGAERVDSLEELARRSD 222 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHH-------------------HTCEECSSHHHHHHHCS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhh-------------------cCcEEeCCHHHHhccCC
Confidence 58999999999999999998 76 8999999998755443321 02344567888889999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|..... ..+. .+.+.+.+++++++|+.|+.++...+.+.+.|++.
T Consensus 223 vVil~vp~~~~t-----------~~li--~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~ 273 (348)
T 2w2k_A 223 CVSVSVPYMKLT-----------HHLI--DEAFFAAMKPGSRIVNTARGPVISQDALIAALKSG 273 (348)
T ss_dssp EEEECCCCSGGG-----------TTCB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEEeCCCChHH-----------HHHh--hHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhC
Confidence 999999864221 1111 12345678999999999999888888888888763
No 93
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.70 E-value=7.7e-12 Score=116.22 Aligned_cols=166 Identities=13% Similarity=0.120 Sum_probs=100.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|.+. |++|++||++++ .+.+.. .++..+ ++.++++.+|+
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~-------------------~g~~~~-~~~~~~~~aDv 76 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLP-------------------RGAEVL-CYSEAASRSDV 76 (201)
Confidence 7899999999999999999988 899999999876 333321 012333 55667889999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCc------ccHHHHHHHHHhhcCCCceEEeeC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPV------KTAEAIEKILMHNSRGINFQILSN 155 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~------gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
||+|||... +.+++ ++.+ +.++++||+.++..+ +..+.+.+.+..... .. .+...
T Consensus 77 Vilav~~~~---------------~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~v-vr-a~~n~ 137 (201)
T 2yjz_A 77 IVLAVHREH---------------YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHV-VK-AFNTI 137 (201)
Confidence 999998531 12223 3433 345788887776543 222334333322100 00 01111
Q ss_pred Cc-ccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHH
Q 011650 156 PE-FLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLA 218 (480)
Q Consensus 156 Pe-~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~ 218 (480)
|. ...+|... .....++.|++ ++..+.+.++|+.++. ..+..++++.+.+.|.+
T Consensus 138 ~a~~~~~g~l~---g~~~~~~~g~~-----~~~~~~v~~ll~~~G~-~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 138 SAWALQSGTLD---ASRQVFVCGND-----SKAKDRVMDIARTLGL-TPLDQGSLVAAKEIENY 192 (201)
Confidence 21 12223210 01112455543 6788899999999874 46677888888888754
No 94
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.07 E-value=1.5e-09 Score=108.52 Aligned_cols=121 Identities=18% Similarity=0.229 Sum_probs=86.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +...... ....++++|+|+++++++|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~~ea~~~a 79 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALD--------LSHVTSVVDTNVSVRAEYSYEAALTGA 79 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHTTCCCCEEEECSHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHH--------HHhhhhccCCCCEEEEeCCHHHHhCCC
Confidence 6999999999999999999998 88 999999999887763210 1111111 1235788899998789999
Q ss_pred CEEEEEccCCCCcCCCCCC----CCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 80 NIVFVSVNTPTKTQGLGAG----KAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~----~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||+++.+|.... .. ...|+ ..+++..+.|.++. ++.++++ .|+|.++...+
T Consensus 80 DiVi~a~g~p~~~g---~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNP~~~~t~~ 141 (331)
T 1pzg_A 80 DCVIVTAGLTKVPG---KPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIV-VTNPLDCMVKV 141 (331)
T ss_dssp SEEEECCSCSSCTT---CCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSSHHHHHHH
T ss_pred CEEEEccCCCCCCC---cccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-EcCchHHHHHH
Confidence 99999997765431 00 13342 44678888888887 5666654 68888876443
No 95
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.02 E-value=9.8e-10 Score=109.73 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=89.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||++++..+ +....+++++++++||+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------g~~~~~~l~ell~~aDv 218 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT------------------------NYTYYGSVVELASNSDI 218 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC------------------------CSEEESCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc------------------------CceecCCHHHHHhcCCE
Confidence 5899999999999999999987 999999999764310 12345688888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC---CCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR---GINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|..... ..+. -+++.+.+++++++|+.|+..+-.++.+.+.|++... +.|+ +.+|.
T Consensus 219 Vil~vP~~~~t-----------~~li--~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv---~~~EP 282 (333)
T 3ba1_A 219 LVVACPLTPET-----------THII--NREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDV---FEREP 282 (333)
T ss_dssp EEECSCCCGGG-----------TTCB--CHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESC---CTTTT
T ss_pred EEEecCCChHH-----------HHHh--hHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEec---CCCCC
Confidence 99999863211 1111 0234456788999999999888888888888876432 2343 45554
Q ss_pred cccCccccccCCCCeEEEE
Q 011650 159 LAEGTAINDLFKPDRVLIG 177 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG 177 (480)
.. . ..++..+.+++.
T Consensus 283 ~~-~---~~L~~~~nvilt 297 (333)
T 3ba1_A 283 EV-P---EKLFGLENVVLL 297 (333)
T ss_dssp CC-C---GGGGGCTTEEEC
T ss_pred CC-c---chhhcCCCEEEC
Confidence 21 1 334444556543
No 96
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.01 E-value=2.1e-09 Score=108.03 Aligned_cols=109 Identities=10% Similarity=0.089 Sum_probs=81.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++... +...+ .+++..++++++++.||+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~-------------------~g~~~~~~l~ell~~aDi 218 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENSK-ERARA-------------------DGFAVAESKDALFEQSDV 218 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHHH-HHHHH-------------------TTCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCCH-HHHHh-------------------cCceEeCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999998643 22221 124556688898999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ .. -+...+.++++.++|+.|+.++-..+.+.+.|++..
T Consensus 219 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 269 (352)
T 3gg9_A 219 LSVHLRLNDETRS-----II--------TVADLTRMKPTALFVNTSRAELVEENGMVTALNRGR 269 (352)
T ss_dssp EEECCCCSTTTTT-----CB--------CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTS
T ss_pred EEEeccCcHHHHH-----hh--------CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCC
Confidence 9999985322111 11 234567789999999999887777777888887653
No 97
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.00 E-value=1.4e-09 Score=108.71 Aligned_cols=132 Identities=11% Similarity=0.140 Sum_probs=90.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||++++. +...+ .++..+ ++++++++||+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~-------------------~g~~~~-~l~e~l~~aDi 203 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKE-------------------LKARYM-DIDELLEKSDI 203 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHH-------------------HTEEEC-CHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhh-------------------cCceec-CHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765 32221 024443 78888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcC---CCceEEeeCCcc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSR---GINFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|..... ..+. -+.+.+.++++ ++++.|+..+...+.+.+.+++... |.|+ +.+|.
T Consensus 204 Vil~vp~~~~t-----------~~~i--~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv---~~~EP 266 (333)
T 2d0i_A 204 VILALPLTRDT-----------YHII--NEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDV---FEKEP 266 (333)
T ss_dssp EEECCCCCTTT-----------TTSB--CHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESC---CSSSS
T ss_pred EEEcCCCChHH-----------HHHh--CHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecC---CCCCC
Confidence 99999865222 1111 12344568889 9999998887777778777776421 2343 56554
Q ss_pred cccCccccccCCCC-eEEEE
Q 011650 159 LAEGTAINDLFKPD-RVLIG 177 (480)
Q Consensus 159 ~~~G~a~~~~~~~~-~vviG 177 (480)
.. . +.++..+ .+++.
T Consensus 267 ~~-~---~~L~~~~~nvilt 282 (333)
T 2d0i_A 267 VR-E---HELFKYEWETVLT 282 (333)
T ss_dssp CS-C---CGGGGCTTTEEEC
T ss_pred CC-C---chHHcCCCCEEEc
Confidence 32 2 3455555 66653
No 98
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.00 E-value=2.8e-09 Score=106.00 Aligned_cols=122 Identities=18% Similarity=0.201 Sum_probs=84.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|+||.++|..|+.+ |+ +|+++|+++++++..... +...... ....+++.++|+ +++++|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 73 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALD--------TSHTNVMAYSNCKVSGSNTY-DDLAGA 73 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTHHHHHTCCCCEEEECCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 7999999999999999999998 87 899999999887754321 1111111 123568888998 669999
Q ss_pred CEEEEEccCCCCcCCCC-CCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 80 NIVFVSVNTPTKTQGLG-AGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~-~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||+++++|......+ +....|+ ..++++.+.|.++. ++.++++ -|.|.++...
T Consensus 74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNP~~~~t~ 134 (322)
T 1t2d_A 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIV-VTNPVDVMVQ 134 (322)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE-CSSSHHHHHH
T ss_pred CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE-ecCChHHHHH
Confidence 99999998775431000 0002333 45677888888887 5666655 4778887543
No 99
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.99 E-value=1e-09 Score=107.30 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=81.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++..+ .....++++++++.||+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------~~~~~~~l~ell~~aDi 176 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQN------------------------VDVISESPADLFRQSDF 176 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTT------------------------CSEECSSHHHHHHHCSE
T ss_pred chheeeccCchhHHHHHHHHhh--CcEEEEEeccccccc------------------------cccccCChHHHhhccCe
Confidence 5899999999999999999988 999999999753211 12345688888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ .. .+...+.+++++++|+.|+.++-..+.+.+.|++..
T Consensus 177 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~ 227 (290)
T 3gvx_A 177 VLIAIPLTDKTRG-----MV--------NSRLLANARKNLTIVNVARADVVSKPDMIGFLKERS 227 (290)
T ss_dssp EEECCCCCTTTTT-----CB--------SHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCT
T ss_pred EEEEeeccccchh-----hh--------hHHHHhhhhcCceEEEeehhcccCCcchhhhhhhcc
Confidence 9999984322111 11 234567899999999999988888888888887643
No 100
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.99 E-value=5.2e-09 Score=104.41 Aligned_cols=117 Identities=21% Similarity=0.296 Sum_probs=83.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +...... ....++++++|+ +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALD--------LNHCMALIGSPAKIFGENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHH--------HHhHhhccCCCCEEEECCCH-HHHCCC
Confidence 6899999999999999999998 88 999999999888753211 1111111 123578898998 669999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHH
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
|+||+++++|.... ....|+ ..++++.+.|.++. ++.++++- |.|.++..
T Consensus 84 D~VI~avg~p~k~g----~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~~~~t 138 (328)
T 2hjr_A 84 DVVIITAGVPRKPN----MTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI-TNPLDAMV 138 (328)
T ss_dssp SEEEECCSCCCCTT----CCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHH
T ss_pred CEEEEcCCCCCCCC----CchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe-cCchHHHH
Confidence 99999998775431 112344 44677888888887 56666553 66777643
No 101
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.96 E-value=4.6e-09 Score=103.95 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=80.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEE-ecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS--IEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFF-STDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~~ 77 (480)
||||+|||+|.||.++|..|+.+ | ++|+++|+++++++.+.... ..... ......+. ++|+ ++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~l--------~~~~~-~~~~~~~~~~~d~-~~~~ 68 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDF--------QDAMA-NLEAHGNIVINDW-AALA 68 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHH--------HHHGG-GSSSCCEEEESCG-GGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHHH--------Hhhhh-hcCCCeEEEeCCH-HHhC
Confidence 78999999999999999999998 7 89999999999887765310 00000 00112333 5777 5689
Q ss_pred cCCEEEEEccCCCC----cCCCCCCCC-----CchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 78 EANIVFVSVNTPTK----TQGLGAGKA-----ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 78 ~aDvVii~Vptp~~----~~~~~~~~~-----~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+||+|+|.|.. .. .. + .++..++++++.+.++.+ +.+|++ .|.|.++...
T Consensus 69 ~aDvViiav~~~~~~~~~~g---~~-r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~-~tNp~~~~~~ 130 (309)
T 1hyh_A 69 DADVVISTLGNIKLQQDNPT---GD-RFAELKFTSSMVQSVGTNLKESGF-HGVLVV-ISNPVDVITA 130 (309)
T ss_dssp TCSEEEECCSCGGGTC-----------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHHH
T ss_pred CCCEEEEecCCcccCCCCCC---CC-HHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE-EcCcHHHHHH
Confidence 99999999997642 10 00 1 123346777888888764 566655 6788877433
No 102
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.95 E-value=4.1e-09 Score=104.75 Aligned_cols=108 Identities=10% Similarity=0.084 Sum_probs=79.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeC-CHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI-SVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~-~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+... |++|++||+ +++....... +....++++++++.||
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~l~ell~~aD 204 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASY--------------------QATFHDSLDSLLSVSQ 204 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHH--------------------TCEECSSHHHHHHHCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChhhhhhc--------------------CcEEcCCHHHHHhhCC
Confidence 5899999999999999999877 899999999 7755321111 1344557888889999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|......+ -. -+...+.++++.++|+.|+..+-..+.+.+.+++.
T Consensus 205 vVil~~p~~~~t~~-----~i--------~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g 255 (320)
T 1gdh_A 205 FFSLNAPSTPETRY-----FF--------NKATIKSLPQGAIVVNTARGDLVDNELVVAALEAG 255 (320)
T ss_dssp EEEECCCCCTTTTT-----CB--------SHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEEeccCchHHHh-----hc--------CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999985321100 11 13455778999999998887666667777777764
No 103
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.94 E-value=5.3e-09 Score=103.49 Aligned_cols=120 Identities=20% Similarity=0.276 Sum_probs=80.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHH-HhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVK-QCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|+||.++|..|+.+ |+ +|.++|+++++++..... +.+... .....++++++|+ +++++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALD--------LYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHh--------HHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 36999999999999999999998 76 899999998877643221 111000 1123568888898 56999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+||+++++|.... ..+.|+ ..++++.+.+.++. ++.+|++ .|.|.++...+
T Consensus 71 aD~Vi~a~g~p~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNPv~~~t~~ 128 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPG----MSREDLIKVNADITRACISQAAPLS-PNAVIIM-VNNPLDAMTYL 128 (309)
T ss_dssp CSEEEECCCC------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE-CCSSHHHHHHH
T ss_pred CCEEEEcCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-cCCchHHHHHH
Confidence 999999999886441 112333 44566777777775 5666655 58898886443
No 104
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.93 E-value=7.9e-09 Score=102.10 Aligned_cols=107 Identities=21% Similarity=0.222 Sum_probs=78.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++. +...+. +... .+++++++.||+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~ell~~aDv 199 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEV-------------------NGKF-VDLETLLKESDV 199 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHT-------------------TCEE-CCHHHHHHHCSE
T ss_pred ceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhc-------------------Cccc-cCHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765 322221 1233 367888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 200 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 200 VTIHVPLVESTYH-----LIN--------EERLKLMKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp EEECCCCSTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHHhh-----hcC--------HHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322100 111 2345678999999999987666667777777764
No 105
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.93 E-value=1.2e-09 Score=108.52 Aligned_cols=108 Identities=14% Similarity=0.172 Sum_probs=79.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++..+.+ .......++++.++.||+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 194 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHF---------------------HETVAFTATADALATANF 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTC---------------------SEEEEGGGCHHHHHHCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhH---------------------hhccccCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975432111 112234567888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ -. -+.....++++.++|+.|+.++-..+.+.+.|++..
T Consensus 195 V~l~lPlt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~ 245 (324)
T 3evt_A 195 IVNALPLTPTTHH-----LF--------STELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQ 245 (324)
T ss_dssp EEECCCCCGGGTT-----CB--------SHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTS
T ss_pred EEEcCCCchHHHH-----hc--------CHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCC
Confidence 9999984322111 11 134566789999999999988888888888887643
No 106
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.92 E-value=3.6e-09 Score=104.84 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=79.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++....... +... .++++.++.||+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~-~~l~ell~~aDv 199 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIREKAEKI--------------------NAKA-VSLEELLKNSDV 199 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHT--------------------TCEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchhHHHhc--------------------Ccee-cCHHHHHhhCCE
Confidence 5899999999999999999987 9999999998766422111 1233 377888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 200 Vvl~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 249 (313)
T 2ekl_A 200 ISLHVTVSKDAKP-----IID--------YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKG 249 (313)
T ss_dssp EEECCCCCTTSCC-----SBC--------HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCChHHHH-----hhC--------HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999986432111 111 2345678999999999987776677787877764
No 107
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.91 E-value=3.2e-09 Score=106.63 Aligned_cols=109 Identities=13% Similarity=0.174 Sum_probs=81.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||+++...+...+ .+....+++++.++.||+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~-------------------~g~~~~~~l~ell~~aDv 223 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKE-------------------TGAKFVEDLNEMLPKCDV 223 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHH-------------------HCCEECSCHHHHGGGCSE
T ss_pred CEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHh-------------------CCCeEcCCHHHHHhcCCE
Confidence 5899999999999999999987 9999999997543333322 123455688998999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -. -+...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 224 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 273 (351)
T 3jtm_A 224 IVINMPLTEKTRG-----MF--------NKELIGKLKKGVLIVNNARGAIMERQAVVDAVESG 273 (351)
T ss_dssp EEECSCCCTTTTT-----CB--------SHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEECCCCCHHHHH-----hh--------cHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhC
Confidence 9999985322111 11 13455678999999999988777778888888764
No 108
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.88 E-value=1.5e-08 Score=101.38 Aligned_cols=107 Identities=8% Similarity=0.095 Sum_probs=79.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++...+... +.+..+++++.++.||+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~---------------------g~~~~~~l~ell~~sDv 230 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALEE---------------------GAIYHDTLDSLLGASDI 230 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHT---------------------TCEECSSHHHHHHTCSE
T ss_pred CEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhhc---------------------CCeEeCCHHHHHhhCCE
Confidence 5899999999999999999876 999999999753322111 23455688898999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -. -+...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 231 V~l~~Plt~~T~~-----li--------~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 280 (345)
T 4g2n_A 231 FLIAAPGRPELKG-----FL--------DHDRIAKIPEGAVVINISRGDLINDDALIEALRSK 280 (345)
T ss_dssp EEECSCCCGGGTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 9999985322111 11 13455678999999999988777777788888764
No 109
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.86 E-value=2.1e-08 Score=99.36 Aligned_cols=117 Identities=23% Similarity=0.306 Sum_probs=80.3
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHH--HH--HcCCCCCCCCChHHHHHHhcCCCEEEecCHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRIN--AW--NSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~--~l--~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++ .+ ..+ .++.. ..+++.+++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~-----------~~~v~~~~~~~- 71 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHG-SSFYP-----------TVSIDGSDDPE- 71 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHT-GGGST-----------TCEEEEESCGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhh-hhhcC-----------CeEEEeCCCHH-
Confidence 58999999999999999999998 88 9999999988776 22 222 11110 12456666764
Q ss_pred HhhcCCEEEEEccCCCCcCCCCCCCCC-----chHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHH
Q 011650 75 HVREANIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIE 138 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~ 138 (480)
++.+||+||+|+++|.... .... +...++++++.+.++ .++++|+. .|.|.++...+.
T Consensus 72 ~~~~aD~Vii~v~~~~~~g----~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~-~~Np~~~~~~~~ 134 (319)
T 1lld_A 72 ICRDADMVVITAGPRQKPG----QSRLELVGATVNILKAIMPNLVKV-APNAIYML-ITNPVDIATHVA 134 (319)
T ss_dssp GGTTCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE-CCSSHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE-ecCchHHHHHHH
Confidence 5899999999998764320 0011 234455777888876 56676654 577877755443
No 110
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.86 E-value=1.4e-08 Score=101.76 Aligned_cols=108 Identities=11% Similarity=0.092 Sum_probs=80.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.... .. .+.....+++++++.||+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~-~~-------------------~g~~~~~~l~ell~~aDv 226 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVE-RA-------------------LGLQRVSTLQDLLFHSDC 226 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHH-HH-------------------HTCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhhH-hh-------------------cCCeecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999987542111 10 023445578888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 227 V~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 276 (347)
T 1mx3_A 227 VTLHCGLNEHNHH-----LIN--------DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG 276 (347)
T ss_dssp EEECCCCCTTCTT-----SBS--------HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----HhH--------HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence 9999985322111 111 3455678999999999999888888888888764
No 111
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.84 E-value=2.3e-08 Score=99.30 Aligned_cols=117 Identities=25% Similarity=0.365 Sum_probs=79.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.+... +..........++.. ++. +++++|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~i~~-~d~-~~~~~a 68 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALD--------LIHGTPFTRRANIYA-GDY-ADLKGS 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHHHGGGSCCCEEEE-CCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHH--------HHhhhhhcCCcEEEe-CCH-HHhCCC
Confidence 7999999999999999999998 88 999999999888765421 000000000123554 465 458999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||+|+|++.... ....|+ ..++++++.|.++. ++.+|++ .|.|.++...
T Consensus 69 DvViiav~~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~-~tNp~~~~~~ 124 (319)
T 1a5z_A 69 DVVIVAAGVPQKPG----ETRLQLLGRNARVMKEIARNVSKYA-PDSIVIV-VTNPVDVLTY 124 (319)
T ss_dssp SEEEECCCCCCCSS----CCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHHH
T ss_pred CEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-eCCcHHHHHH
Confidence 99999999875321 012232 33577888888875 4565554 5778877543
No 112
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.84 E-value=1.8e-08 Score=100.12 Aligned_cols=115 Identities=17% Similarity=0.314 Sum_probs=74.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHH----HHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINA----WNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~----l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
|||+|||+|++|.++|..|+.+ |+ +|.++|+++++++. +.... ++. ...+++.+..++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~-------------~~~~i~~~~~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGL-PFM-------------GQMSLYAGDYSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSC-CCT-------------TCEEEC--CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhH-Hhc-------------CCeEEEECCHHH
Confidence 6899999999999999999987 66 99999999876543 22211 111 123333222456
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCC----CCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++||+||+++++|.... .++ ..+...++++.+.+.++. ++.+|++ .|.|+++...+
T Consensus 72 ~~~aDvVii~~g~p~k~g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~~~~ 132 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPG---ETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV-VSNPVDIITYM 132 (318)
T ss_dssp GTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE-CSSSHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCC---cCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHHH
Confidence 999999999999886431 010 123445678888888885 5666666 68999986554
No 113
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.84 E-value=1e-08 Score=102.42 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=66.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||++++. . .......+++++++.||+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~------~------------------~~~~~~~sl~ell~~aDv 225 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF--GMSVRYWNRSTLS------G------------------VDWIAHQSPVDLARDSDV 225 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCT------T------------------SCCEECSSHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCccc------c------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999887 9999999997643 0 013445688898999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|.... +..+. -+...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 226 Vil~vP~t~~-----------t~~li--~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 226 LAVCVAASAA-----------TQNIV--DASLLQALGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp EEECC-----------------------CHHHHHHTTTTCEEEECSCC--------------C
T ss_pred EEEeCCCCHH-----------HHHHh--hHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999984221 11111 24566778999999999888766666677777653
No 114
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.84 E-value=2.2e-09 Score=106.55 Aligned_cols=108 Identities=11% Similarity=0.099 Sum_probs=78.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++...+.+ .......+++++++.||+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 197 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF--GMKVLGVSRSGRERAGF---------------------DQVYQLPALNKMLAQADV 197 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCTTC---------------------SEEECGGGHHHHHHTCSE
T ss_pred ceEEEEEECHHHHHHHHHHHhC--CCEEEEEcCChHHhhhh---------------------hcccccCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975211100 111224578888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ -.+ +.....++++.++|+.|+.++-..+.+.+.|++..
T Consensus 198 V~l~lPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~ 248 (324)
T 3hg7_A 198 IVSVLPATRETHH-----LFT--------ASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGK 248 (324)
T ss_dssp EEECCCCCSSSTT-----SBC--------TTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTS
T ss_pred EEEeCCCCHHHHH-----HhH--------HHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCC
Confidence 9999985322211 111 23456689999999999888877788888887643
No 115
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.83 E-value=3.4e-08 Score=99.43 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=78.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++......... +... .++++.++.||+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~--------------------g~~~-~~l~ell~~aDv 233 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF--RARIRVFDPWLPRSMLEEN--------------------GVEP-ASLEDVLTKSDF 233 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS--CCEEEEECSSSCHHHHHHT--------------------TCEE-CCHHHHHHSCSE
T ss_pred CEEEEecCCcccHHHHHhhhhC--CCEEEEECCCCCHHHHhhc--------------------Ceee-CCHHHHHhcCCE
Confidence 5899999999999999998876 9999999997533221111 1233 478888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ..+. -+...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 234 V~l~~Plt~~T-----------~~li--~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 283 (365)
T 4hy3_A 234 IFVVAAVTSEN-----------KRFL--GAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSG 283 (365)
T ss_dssp EEECSCSSCC--------------CC--CHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTT
T ss_pred EEEcCcCCHHH-----------Hhhc--CHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcC
Confidence 99999853221 1111 13456779999999999988777777788888764
No 116
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.82 E-value=2.6e-08 Score=105.63 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=78.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||.++|..|... |++|++||++......... ++..+ +++++++.||+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~--------------------g~~~~-~l~e~~~~aDv 199 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSPARAAQL--------------------GIELL-SLDDLLARADF 199 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCHHHHHHH--------------------TCEEC-CHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEECCCCChhHHHhc--------------------CcEEc-CHHHHHhcCCE
Confidence 6899999999999999999987 9999999997643211111 12333 78888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHH-HHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ...+ +.+.+.++++++|++.|+..+-..+.+.+.+++.
T Consensus 200 V~l~~P~~~~t--------------~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g 249 (529)
T 1ygy_A 200 ISVHLPKTPET--------------AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGG 249 (529)
T ss_dssp EEECCCCSTTT--------------TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTS
T ss_pred EEECCCCchHH--------------HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcC
Confidence 99999854211 1112 2356778999999999988887777787777653
No 117
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.82 E-value=1.6e-08 Score=100.73 Aligned_cols=108 Identities=8% Similarity=0.074 Sum_probs=79.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++...+.... .+.... +++++++.||+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~~-~l~ell~~aDv 203 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQR-------------------LGLRQV-ACSELFASSDF 203 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHH-------------------HTEEEC-CHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHh-------------------cCceeC-CHHHHHhhCCE
Confidence 5899999999999999998876 9999999998633222211 023333 78888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ .. -+...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 204 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 253 (330)
T 4e5n_A 204 ILLALPLNADTLH-----LV--------NAELLALVRPGALLVNPCRGSVVDEAAVLAALERG 253 (330)
T ss_dssp EEECCCCSTTTTT-----CB--------CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 9999985322111 11 23466789999999999988777777788888764
No 118
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.82 E-value=2.2e-08 Score=99.89 Aligned_cols=106 Identities=11% Similarity=0.182 Sum_probs=79.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.... .. +.... +++++++.||+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~-~~--------------------g~~~~-~l~ell~~aDv 197 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDLK-EK--------------------GCVYT-SLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHH-HT--------------------TCEEC-CHHHHHHHCSE
T ss_pred ceEEEECcCHHHHHHHHHHHHC--cCEEEEECCCcchhhH-hc--------------------Cceec-CHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765422 21 12333 48888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ .. -+...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 198 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 247 (334)
T 2pi1_A 198 ISLHVPYTKETHH-----MI--------NEERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeCCCChHHHH-----hh--------CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322211 11 13455678999999999988877778888888764
No 119
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.82 E-value=9.9e-09 Score=104.38 Aligned_cols=109 Identities=13% Similarity=0.134 Sum_probs=79.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++...+...+ .++....++++.++.||+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~-------------------~G~~~~~~l~ell~~aDv 250 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKE-------------------LNLTWHATREDMYPVCDV 250 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHH-------------------HTCEECSSHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhh-------------------cCceecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999997543322221 023444678888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -.+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 251 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 251 VTLNCPLHPETEH-----MIN--------DETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp EEECSCCCTTTTT-----CBS--------HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEecCCchHHHH-----Hhh--------HHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 9999985322100 111 3455778999999999987766667788888764
No 120
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.81 E-value=4.1e-08 Score=97.98 Aligned_cols=107 Identities=13% Similarity=0.046 Sum_probs=79.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. ..... +... .+++++++.||+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~-~~~~~-------------------g~~~-~~l~ell~~aDv 222 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPE-VSASF-------------------GVQQ-LPLEEIWPLCDF 222 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHH-HHHHT-------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchh-hhhhc-------------------Ccee-CCHHHHHhcCCE
Confidence 5899999999999999999876 99999999986552 22210 1232 378888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 223 V~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 223 ITVHTPLLPSTTG-----LLN--------DNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 272 (335)
T ss_dssp EEECCCCCTTTTT-----SBC--------HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEecCCCHHHHH-----hhC--------HHHHhhCCCCcEEEECCCccccCHHHHHHHHHhC
Confidence 9999986432110 111 3456789999999999988776677787777764
No 121
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.81 E-value=1.5e-08 Score=103.44 Aligned_cols=105 Identities=14% Similarity=0.157 Sum_probs=78.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++.. . .+......+++++++.||+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~yd~~~~~---------~--------------~~~~~~~~sl~ell~~aDv 211 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL--GMTVRYYDTSDKL---------Q--------------YGNVKPAASLDELLKTSDV 211 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCCC---------C--------------BTTBEECSSHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCcchh---------c--------------ccCcEecCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999986321 0 0123456788999999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -.+ +.....++++.++|+.|+.++-..+.+.+.|++.
T Consensus 212 V~lhvPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g 261 (416)
T 3k5p_A 212 VSLHVPSSKSTSK-----LIT--------EAKLRKMKKGAFLINNARGSDVDLEALAKVLQEG 261 (416)
T ss_dssp EEECCCC-----C-----CBC--------HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEeCCCCHHHhh-----hcC--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 9999985322110 111 2345678999999999998877778888888764
No 122
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.81 E-value=3.3e-08 Score=98.14 Aligned_cols=115 Identities=16% Similarity=0.291 Sum_probs=80.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHH-HhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVK-QCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +..... .....+++.++|+ +++++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALD--------ITHSMVMFGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 6899999999999999999998 88 999999999887754210 000000 0113467888888 569999
Q ss_pred CEEEEEccCCCCcCCCCCCCCC-----chHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+||+|++.|.... .. .. +...++++++.|.++.+ ++++++-| .|.+.
T Consensus 74 DiVi~avg~p~~~g---~~-r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~s-Np~~~ 126 (317)
T 2ewd_A 74 DVVIITASIPGRPK---DD-RSELLFGNARILDSVAEGVKKYCP-NAFVICIT-NPLDV 126 (317)
T ss_dssp SEEEECCCCSSCCS---SC-GGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECC-SSHHH
T ss_pred CEEEEeCCCCCCCC---Cc-HHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeC-ChHHH
Confidence 99999998876431 11 11 23446778888888865 77776543 45444
No 123
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.79 E-value=2.7e-09 Score=105.66 Aligned_cols=107 Identities=9% Similarity=0.082 Sum_probs=78.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||++++..+.+. ......+++++++.||+
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~---------------------~~~~~~~l~ell~~aDi 196 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW--GFPLRCWSRSRKSWPGVE---------------------SYVGREELRAFLNQTRV 196 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCCCCTTCE---------------------EEESHHHHHHHHHTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCchhhhhhh---------------------hhcccCCHHHHHhhCCE
Confidence 5899999999999999999887 999999999764211000 01112467888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -. -+...+.++++.++|+.|..+.-..+.+.+.|++.
T Consensus 197 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 246 (315)
T 3pp8_A 197 LINLLPNTAQTVG-----II--------NSELLDQLPDGAYVLNLARGVHVQEADLLAALDSG 246 (315)
T ss_dssp EEECCCCCGGGTT-----CB--------SHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchhhhh-----hc--------cHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhC
Confidence 9999984322111 11 13456778999999999988877778888888764
No 124
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.79 E-value=2.8e-08 Score=101.61 Aligned_cols=105 Identities=16% Similarity=0.128 Sum_probs=79.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++.. . .+......++++.++.||+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-----~------------------~~~~~~~~~l~ell~~aDv 200 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKL-----P------------------LGNATQVQHLSDLLNMSDV 200 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCC-----C------------------CTTCEECSCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEEcCCchh-----c------------------cCCceecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999986421 0 0223455688898999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 201 V~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g 250 (404)
T 1sc6_A 201 VSLHVPENPSTKN-----MMG--------AKEISLMKPGSLLINASRGTVVDIPALADALASK 250 (404)
T ss_dssp EEECCCSSTTTTT-----CBC--------HHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTT
T ss_pred EEEccCCChHHHH-----Hhh--------HHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcC
Confidence 9999986422111 111 2345678999999999998777777788888764
No 125
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.78 E-value=2.7e-08 Score=100.56 Aligned_cols=109 Identities=19% Similarity=0.182 Sum_probs=80.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+... |++ |++||+++...+...+ .+.....++++.++.||
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aD 223 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEK-------------------VGARRVENIEELVAQAD 223 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHH-------------------TTEEECSSHHHHHHTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHh-------------------cCcEecCCHHHHHhcCC
Confidence 5899999999999999999887 897 9999987644333322 12444567888889999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 224 vV~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g 274 (364)
T 2j6i_A 224 IVTVNAPLHAGTKG-----LIN--------KELLSKFKKGAWLVNTARGAICVAEDVAAALESG 274 (364)
T ss_dssp EEEECCCCSTTTTT-----CBC--------HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEECCCCChHHHH-----HhC--------HHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 99999986322111 111 3455778999999999988777777788888764
No 126
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.78 E-value=2.9e-08 Score=97.99 Aligned_cols=113 Identities=19% Similarity=0.384 Sum_probs=74.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcC---CCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSD---QLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g---~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... ..++. ...+++. ++. +++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~-----------~~~~i~~-~~~-~a~ 65 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVS-----------HGTRVWH-GGH-SEL 65 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTT-----------SCCEEEE-ECG-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhc-----------CCeEEEE-CCH-HHh
Confidence 7999999999999999999998 88 999999999876643221 11110 0123443 465 469
Q ss_pred hcCCEEEEEccCCCCcCCCCCCC----CCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccH
Q 011650 77 REANIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA 134 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~ 134 (480)
++||+||+|++.|.... .++ ..++..++++.+.+.++. ++.+|++ .|.|.++.
T Consensus 66 ~~aDvVIi~~~~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~-~tNP~~~~ 122 (304)
T 2v6b_A 66 ADAQVVILTAGANQKPG---ESRLDLLEKNADIFRELVPQITRAA-PDAVLLV-TSNPVDLL 122 (304)
T ss_dssp TTCSEEEECC---------------CHHHHHHHHHHHHHHHHHHC-SSSEEEE-CSSSHHHH
T ss_pred CCCCEEEEcCCCCCCCC---CcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEE-ecCchHHH
Confidence 99999999998775320 000 124456678888888884 6676665 57777653
No 127
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.77 E-value=9.4e-08 Score=93.64 Aligned_cols=117 Identities=20% Similarity=0.239 Sum_probs=78.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+.+ |+ +|.+||+++++++..... +...... ....+++.++| .+++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGAD-YSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHH--------HHHHHHTTTCCCEEEEESC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHH--------HHhhhhhcCCCCEEEEeCC-HHHhCC
Confidence 7999999999999999999988 77 999999999887632110 0000000 01235777788 667999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCC-----chHHHHHHHHHHHhhCCCCcEEEEecCCCcccHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
||+||++.+.|... | .+ +. +.+.+++..+.|.++. ++.++++- |.|..+.-
T Consensus 70 aDiVViaag~~~kp-G--~~-R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv-sNPvd~~t 125 (294)
T 1oju_A 70 SEIIVVTAGLARKP-G--MT-RLDLAHKNAGIIKDIAKKIVENA-PESKILVV-TNPMDVMT 125 (294)
T ss_dssp CSEEEECCCCCCCS-S--CC-HHHHHHHHHHHHHHHHHHHHTTS-TTCEEEEC-SSSHHHHH
T ss_pred CCEEEECCCCCCCC-C--Cc-HHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-CCcchHHH
Confidence 99999999887543 1 11 12 2344566667777774 45665553 47877643
No 128
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.75 E-value=2.8e-08 Score=97.95 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=77.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++ +. +. ....++++.++.||+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~dr~~~--~~---~~--------------------~~~~~l~ell~~aDv 177 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPK--EG---PW--------------------RFTNSLEEALREARA 177 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCC--CS---SS--------------------CCBSCSHHHHTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcc--cc---Cc--------------------ccCCCHHHHHhhCCE
Confidence 6899999999999999999987 999999999764 11 10 113466778899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|...... .+. -+...+.+++++++|+.|+.++-..+.+.+.+++.
T Consensus 178 V~l~~P~~~~t~-----------~~i--~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g 227 (303)
T 1qp8_A 178 AVCALPLNKHTR-----------GLV--KYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKER 227 (303)
T ss_dssp EEECCCCSTTTT-----------TCB--CHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred EEEeCcCchHHH-----------HHh--CHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhC
Confidence 999998642211 111 12456789999999999988776677787777764
No 129
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.74 E-value=5.2e-08 Score=97.38 Aligned_cols=106 Identities=16% Similarity=0.232 Sum_probs=79.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++. ... ....+. +++++++.||+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~--~~~--------------------~~~~~~-~l~ell~~aDv 203 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM--GAKVIAYDVAYNP--EFE--------------------PFLTYT-DFDTVLKEADI 203 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCG--GGT--------------------TTCEEC-CHHHHHHHCSE
T ss_pred CeEEEEecCHHHHHHHHHHhhC--CCEEEEECCChhh--hhh--------------------cccccc-CHHHHHhcCCE
Confidence 5899999999999999999987 9999999998643 111 113333 78888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.|++..
T Consensus 204 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 254 (343)
T 2yq5_A 204 VSLHTPLFPSTEN-----MIG--------EKQLKEMKKSAYLINCARGELVDTGALIKALQDGE 254 (343)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred EEEcCCCCHHHHH-----Hhh--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCC
Confidence 9999985322211 111 23456789999999999888777788888887653
No 130
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.73 E-value=3.6e-08 Score=101.42 Aligned_cols=206 Identities=13% Similarity=0.034 Sum_probs=117.4
Q ss_pred CceEEEECCChhHHHHHHHHHHc----CCCCeEEEEeCCH-HHHHHHH-cCCCCCCCCChHHHHHHhcCCCEEEecCHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALK----CPSIEVAVVDISV-PRINAWN-SDQLPIYEPGLEEVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~----~~G~~V~~~D~~~-~~v~~l~-~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
|+||+|||+|.||.++|..|.+. +.|++|++.+++. ...+... .|.... .. .+.++++
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~--------------d~--ta~s~aE 117 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEE--------------SG--TLGDIWE 117 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTT--------------TT--CEEEHHH
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEe--------------cC--CCCCHHH
Confidence 47999999999999999999875 2368888665543 2233222 221100 00 1246788
Q ss_pred HhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHh---hcC-CCce
Q 011650 75 HVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMH---NSR-GINF 150 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~---~~~-g~~~ 150 (480)
++++||+||+|||.. ...+++++|.++++++++|++.+ |.+-. .+++ ..+ +.++
T Consensus 118 Aa~~ADVVILaVP~~---------------~~~eVl~eI~p~LK~GaILs~Aa----Gf~I~---~le~~~i~~p~dv~V 175 (525)
T 3fr7_A 118 TVSGSDLVLLLISDA---------------AQADNYEKIFSHMKPNSILGLSH----GFLLG---HLQSAGLDFPKNISV 175 (525)
T ss_dssp HHHHCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEESS----SHHHH---HHHHTTCCCCTTSEE
T ss_pred HHhcCCEEEECCChH---------------HHHHHHHHHHHhcCCCCeEEEeC----CCCHH---HHhhhcccCCCCCcE
Confidence 899999999999831 22456778999999999976643 43211 1222 111 2232
Q ss_pred EEeeCCcccccCcccc-----c----cCCCC-eEEEEccCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHHHHH-H
Q 011650 151 QILSNPEFLAEGTAIN-----D----LFKPD-RVLIGGRETPEGMKAIKALKDVYAHWVPEDRILCTNLWSAEVSKLA-A 219 (480)
Q Consensus 151 ~v~~~Pe~~~~G~a~~-----~----~~~~~-~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~-~ 219 (480)
+..+|. .||..+. . +...+ -+-+..+. +.+..+.+..++..++. ..++.++...---..++ +
T Consensus 176 -VrVmPN--tPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~---tgea~e~alala~aiG~-~~vieTtf~eE~e~DLfge 248 (525)
T 3fr7_A 176 -IAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDV---DGRATDVALGWSVALGS-PFTFATTLEQEYKSDIFGE 248 (525)
T ss_dssp -EEEEES--SCHHHHHHHHHHHTTSTTCSCCEEEEEEECS---SSCHHHHHHHHHHHTTC-SEEEECCHHHHHHHHHHHH
T ss_pred -EEEecC--CCchhHHHHHhcccccccCCccEEEEcCCCC---CHHHHHHHHHHHHHCCC-CeeeeeeeeeehhHhhhhh
Confidence 334553 2232210 0 11223 23232221 35688899999999874 33444443321112222 1
Q ss_pred H-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh
Q 011650 220 N-AFLAQRISSVNAMSALCEATGADVSQVSHAI 251 (480)
Q Consensus 220 N-~~~~~~ia~~nE~~~l~~~~gid~~~v~~~~ 251 (480)
- .+....-+++.-++....+.|++++..+..+
T Consensus 249 qtvLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~ 281 (525)
T 3fr7_A 249 RGILLGAVHGIVEALFRRYTEQGMDEEMAYKNT 281 (525)
T ss_dssp HTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HhhhcCcHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 1 1334445676777777888899987766544
No 131
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.72 E-value=9.7e-08 Score=94.71 Aligned_cols=119 Identities=18% Similarity=0.275 Sum_probs=79.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPS--IEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.+|.++|..|+.+ | .+|.++|+++++++..... +.... ......++++.+..+++++|
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~--~~~~ei~L~Di~~~~~~g~~~d--------l~~~~-~~~~~~~~v~~~~~~a~~~a 75 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ--SIVDELVIIDLDTEKVRGDVMD--------LKHAT-PYSPTTVRVKAGEYSDCHDA 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCSEEEEECSCHHHHHHHHHH--------HHHHG-GGSSSCCEEEECCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHhhhhhhh--------HHhhh-hhcCCCeEEEeCCHHHhCCC
Confidence 5899999999999999999987 6 5999999998776642210 00100 00111233333445679999
Q ss_pred CEEEEEccCCCCcCCCCCCC----CCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 80 NIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||++++.|... + .++ ..+...+++..+.|.++. ++.+|++ .|.|.++...
T Consensus 76 DvVvi~ag~~~~~-g--~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~t~ 131 (317)
T 3d0o_A 76 DLVVICAGAAQKP-G--ETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLV-ATNPVDILAY 131 (317)
T ss_dssp SEEEECCCCCCCT-T--CCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHHHHH
T ss_pred CEEEECCCCCCCC-C--CcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHH
Confidence 9999999988643 1 010 123356677777888874 5676666 6799888544
No 132
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.71 E-value=1.3e-07 Score=93.93 Aligned_cols=119 Identities=22% Similarity=0.294 Sum_probs=79.7
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.... .+...... ....+++.++|+ +++++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~--------dl~~~~~~~~~~~~v~~t~d~-~a~~~ 75 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGL--------DIAESSPVDGFDAKFTGANDY-AAIEG 75 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHH--------HHHHHHHHHTCCCCEEEESSG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHH--------HHhchhhhcCCCCEEEEeCCH-HHHCC
Confidence 46999999999999999999998 77 99999999988753321 01111000 013467778887 56999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCC-----chHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|... | .+ +. +...+++..+.|.++. ++.++++ -|.|..+.-.
T Consensus 76 aDiVIiaag~p~k~-G--~~-R~dl~~~N~~i~~~i~~~i~~~~-p~a~iiv-vtNPvd~~t~ 132 (324)
T 3gvi_A 76 ADVVIVTAGVPRKP-G--MS-RDDLLGINLKVMEQVGAGIKKYA-PEAFVIC-ITNPLDAMVW 132 (324)
T ss_dssp CSEEEECCSCCCC---------CHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSSHHHHHH
T ss_pred CCEEEEccCcCCCC-C--CC-HHHHHHhhHHHHHHHHHHHHHHC-CCeEEEe-cCCCcHHHHH
Confidence 99999999887644 1 11 22 3345666777777776 4555554 3467766443
No 133
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.71 E-value=3.9e-08 Score=97.29 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=74.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++..+ .. ..++++.++.||+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-------------------------~~-~~~l~ell~~aDv 196 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF--GMRVVYHARTPKPLP-------------------------YP-FLSLEELLKEADV 196 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSS-------------------------SC-BCCHHHHHHHCSE
T ss_pred CEEEEEEECHHHHHHHHHHHHC--CCEEEEECCCCcccc-------------------------cc-cCCHHHHHhhCCE
Confidence 5899999999999999999987 999999999754321 01 2467778899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHH
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILM 142 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~ 142 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+..+-..+.+.+.++
T Consensus 197 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 197 VSLHTPLTPETHR-----LLN--------RERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred EEEeCCCChHHHh-----hcC--------HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 9999986422100 111 23456789999999999877666677777776
No 134
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.69 E-value=7.4e-08 Score=95.70 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=77.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHH----HHcCCCCCCCCChHHHHHHhcCCCEEE-ecCHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINA----WNSDQLPIYEPGLEEVVKQCRGKNLFF-STDVEK 74 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~----l~~g~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~ 74 (480)
|||+|||+|+||.++|..|+.+ |+ +|+++|+++++++. |+.+ .++.. .++++ +++. +
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~------------~~v~i~~~~~-~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHG-KAFAP------------QPVKTSYGTY-E 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHT-GGGSS------------SCCEEEEECG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhc-ccccc------------CCeEEEeCcH-H
Confidence 6999999999999999999988 66 99999999998876 5544 33321 12233 4455 4
Q ss_pred HhhcCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 75 HVREANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++++||+||+|.++|.... ..+.| .+.+++..+.+.++.+ +.+|++ -|.|..+...
T Consensus 70 a~~~aDvVvi~ag~p~kpG----~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlv-vtNPvd~~t~ 130 (326)
T 3pqe_A 70 DCKDADIVCICAGANQKPG----ETRLELVEKNLKIFKGIVSEVMASGF-DGIFLV-ATNPVDILTY 130 (326)
T ss_dssp GGTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHHH
T ss_pred HhCCCCEEEEecccCCCCC----ccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEE-cCChHHHHHH
Confidence 6999999999999886541 11223 2445666677777655 555544 4577776433
No 135
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.68 E-value=5e-08 Score=97.40 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=78.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. +.+. ..+.+++++.++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~~~~--------------------~~~~~~l~ell~~aDv 202 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPE--LEKK--------------------GYYVDSLDDLYKQADV 202 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHH--HHHT--------------------TCBCSCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcchh--HHhh--------------------CeecCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999987653 2211 1123467788899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 203 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 203 ISLHVPDVPANVH-----MIN--------DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp EEECSCCCGGGTT-----CBS--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCcHHHHH-----HHh--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322100 111 2345678999999999988777777888888764
No 136
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.67 E-value=1.4e-07 Score=81.01 Aligned_cols=125 Identities=13% Similarity=0.229 Sum_probs=76.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHHHhcCCCEEEecCH---HH-Hh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSD-QLPIYEPGLEEVVKQCRGKNLFFSTDV---EK-HV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g-~~~~~e~~l~~~~~~~~~~~l~~t~d~---~~-a~ 76 (480)
|+|+|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+. .......+ .++. .+ .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d---------------~~~~~~l~~~~~ 67 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGD---------------CTKIKTLEDAGI 67 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESC---------------TTSHHHHHHTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcC---------------CCCHHHHHHcCc
Confidence 7999999999999999999998 99999999999998887642 11110000 0111 11 15
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCC
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNP 156 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
.++|+||+|+|.+. ....+..+++.+.++++|+. + ..++..+ .+++.+ .+ .+.+|
T Consensus 68 ~~~d~vi~~~~~~~---------------~~~~~~~~~~~~~~~~ii~~-~-~~~~~~~----~l~~~g--~~--~v~~p 122 (140)
T 1lss_A 68 EDADMYIAVTGKEE---------------VNLMSSLLAKSYGINKTIAR-I-SEIEYKD----VFERLG--VD--VVVSP 122 (140)
T ss_dssp TTCSEEEECCSCHH---------------HHHHHHHHHHHTTCCCEEEE-C-SSTTHHH----HHHHTT--CS--EEECH
T ss_pred ccCCEEEEeeCCch---------------HHHHHHHHHHHcCCCEEEEE-e-cCHhHHH----HHHHcC--CC--EEECH
Confidence 68999999987421 12233344555666676653 2 2334332 334432 33 35778
Q ss_pred cccccCcccccc
Q 011650 157 EFLAEGTAINDL 168 (480)
Q Consensus 157 e~~~~G~a~~~~ 168 (480)
++...+.....+
T Consensus 123 ~~~~~~~~~~~~ 134 (140)
T 1lss_A 123 ELIAANYIEKLI 134 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 776554443333
No 137
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.65 E-value=2.4e-08 Score=98.86 Aligned_cols=107 Identities=11% Similarity=0.138 Sum_probs=77.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..++..|++..+..+|.+||+++++.+++.+.. ..++..+++++++++++|+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------------~~~~~~~~~~~e~v~~aDi 199 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------------QGEVRVCSSVQEAVAGADV 199 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------------SSCCEECSSHHHHHTTCSE
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------------hCCeEEeCCHHHHHhcCCE
Confidence 689999999999999999987521249999999999988876421 0025567889888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|.. .. - +.. +.++++++|++.|+..|.. +++.+.+.+.
T Consensus 200 Vi~atp~~-~~-------v---------~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~ 242 (312)
T 2i99_A 200 IITVTLAT-EP-------I---------LFG--EWVKPGAHINAVGASRPDW-RELDDELMKE 242 (312)
T ss_dssp EEECCCCS-SC-------C---------BCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHHH
T ss_pred EEEEeCCC-Cc-------c---------cCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHhc
Confidence 99998742 11 0 111 4678899999888887776 4444444433
No 138
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.63 E-value=1.5e-07 Score=93.43 Aligned_cols=119 Identities=17% Similarity=0.182 Sum_probs=81.5
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..++.+ |+ +|.++|+++++++..... +..........++..++|+++ +++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~D--------L~~~~~~~~~~~i~~t~d~~~-~~d 89 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMD--------LEHGSLFLHTAKIVSGKDYSV-SAG 89 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHH--------HHHHGGGSCCSEEEEESSSCS-CSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHH--------hhhhhhcccCCeEEEcCCHHH-hCC
Confidence 37999999999999999999988 65 999999999887653320 000000001245777889876 999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|..+ |.+ +.| .+.+++..+.+.++. ++.++++ -|.|..+.-.
T Consensus 90 aDiVIitaG~p~kp---G~t-R~dll~~N~~I~k~i~~~I~k~~-P~a~ilv-vtNPvdi~t~ 146 (330)
T 3ldh_A 90 SKLVVITAGARQQE---GES-RLNLVQRNVNIFKFIIPNIVKHS-PDCLKEL-HPELGTDKNK 146 (330)
T ss_dssp CSEEEECCSCCCCS---SCC-TTGGGHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHHH
T ss_pred CCEEEEeCCCCCCC---CCC-HHHHHHhhHHHHHHHHHHHHhhC-CCceEEe-CCCccHHHHH
Confidence 99999999988654 112 223 345667777888884 5565554 3577766443
No 139
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.61 E-value=2.2e-07 Score=92.88 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=77.9
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHH----HHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINA----WNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~----l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+ |++|.++|..++..+...+|.++|+++++++. |+.+. + ...++++++|+.++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~------------~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--F------------EGLNLTFTSDIKEA 73 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--C------------TTCCCEEESCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--C------------CCCceEEcCCHHHH
Confidence 369999997 99999999999987222599999999987765 33321 1 01357788999888
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++||+||+|..+|.... ..+.| ...+++..+.+.++.+...+|++ -|.|..+.-.+
T Consensus 74 l~dADvVvitaG~p~kpG----~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlv-vsNPvd~~t~i 135 (343)
T 3fi9_A 74 LTDAKYIVSSGGAPRKEG----MTREDLLKGNAEIAAQLGKDIKSYCPDCKHVII-IFNPADITGLV 135 (343)
T ss_dssp HTTEEEEEECCC-----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEE-CSSSHHHHHHH
T ss_pred hCCCCEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEE-ecCchHHHHHH
Confidence 999999999998875431 11223 24455666677777655542333 36787765443
No 140
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.61 E-value=5.2e-07 Score=89.18 Aligned_cols=118 Identities=25% Similarity=0.329 Sum_probs=78.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCC--HHHHHHHHcCCCCCCCCChHHHHHHh-cCCCEEEecCHHHHhh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS--VPRINAWNSDQLPIYEPGLEEVVKQC-RGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~--~~~v~~l~~g~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~ 77 (480)
+||+|||+|.||.++|..|+.+ |+ +|+++|++ +++.+..... +....... ...+++.+++++ +++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~d--------l~~~~~~~~~~~~i~~t~d~~-a~~ 77 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALD--------MLEASPVQGFDANIIGTSDYA-DTA 77 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHH--------HHHHHHHHTCCCCEEEESCGG-GGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhh--------HHHhhhhccCCCEEEEcCCHH-HhC
Confidence 4899999999999999999998 88 99999999 5555543310 11110001 235677788865 599
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+||+|.++|..+. .+ +.| ...+++..+.+.++.+ +.++++ -|.|..+.-.
T Consensus 78 ~aDvVIiaag~p~kpg---~~-R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlv-vsNPvd~~t~ 135 (315)
T 3tl2_A 78 DSDVVVITAGIARKPG---MS-RDDLVATNSKIMKSITRDIAKHSP-NAIIVV-LTNPVDAMTY 135 (315)
T ss_dssp TCSEEEECCSCCCCTT---CC-HHHHHHHHHHHHHHHHHHHHHHCT-TCEEEE-CCSSHHHHHH
T ss_pred CCCEEEEeCCCCCCCC---CC-HHHHHHHHHHHHHHHHHHHHHhCC-CeEEEE-CCChHHHHHH
Confidence 9999999999886541 11 222 2345666677777754 555544 3467666443
No 141
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.60 E-value=5.2e-07 Score=89.33 Aligned_cols=113 Identities=17% Similarity=0.234 Sum_probs=80.4
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHH--HHHcCCCCCCCCChHHHHHHhcCCCEEE---ecCHH
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPS--IEVAVVDISVPRIN--AWNSDQLPIYEPGLEEVVKQCRGKNLFF---STDVE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~--~l~~g~~~~~e~~l~~~~~~~~~~~l~~---t~d~~ 73 (480)
|||+|||+ |++|.+++..|+.. | ++|.++|+++.... .+.... ...+++. ++|++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~---------------~~~~l~~~~~t~d~~ 63 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIE---------------TRATVKGYLGPEQLP 63 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSS---------------SSCEEEEEESGGGHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccC---------------cCceEEEecCCCCHH
Confidence 79999998 99999999999987 6 79999999872221 222211 0124565 36888
Q ss_pred HHhhcCCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 74 KHVREANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++++||+||++.+.|.... ..+.|+ ..++++.+.+.++.+ +.+|++ .|.|.++...+
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv-~sNPv~~~~~i 126 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPG----MTRDDLFNTNATIVATLTAACAQHCP-DAMICI-ISNPVNSTIPI 126 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTT----CCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEE-CSSCHHHHHHH
T ss_pred HHhCCCCEEEECCCcCCCCC----CcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEE-ECCCcchhHHH
Confidence 88999999999998876431 123455 677888888888775 445544 47898876543
No 142
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.57 E-value=6.1e-07 Score=88.99 Aligned_cols=119 Identities=21% Similarity=0.293 Sum_probs=79.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|.++|+++++++..... +...... ....+++.++++ +++++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~d--------L~~~~~~~~~~~~v~~t~d~-~a~~~ 73 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALD--------LLQTCPIEGVDFKVRGTNDY-KDLEN 73 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHH--------HHhhhhhcCCCcEEEEcCCH-HHHCC
Confidence 37999999999999999999987 66 999999999876533210 0000000 012356667786 46999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCC-----chHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|... | .+ +. +...+++..+.|.++. ++.++++- |.|.++.-.
T Consensus 74 aDvVIi~ag~p~k~-G--~~-R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd~~t~ 130 (321)
T 3p7m_A 74 SDVVIVTAGVPRKP-G--MS-RDDLLGINIKVMQTVGEGIKHNC-PNAFVICI-TNPLDIMVN 130 (321)
T ss_dssp CSEEEECCSCCCCT-T--CC-HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHH
T ss_pred CCEEEEcCCcCCCC-C--CC-HHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe-cCchHHHHH
Confidence 99999999887543 1 11 11 3355667777778877 45555543 678776543
No 143
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.53 E-value=4.4e-07 Score=90.31 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=77.5
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCC--CeEEEEeCCHHH--HHHHHcCCCCCCCCChHHHHHHhcCCCEEE---ecCH
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPS--IEVAVVDISVPR--INAWNSDQLPIYEPGLEEVVKQCRGKNLFF---STDV 72 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G--~~V~~~D~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~---t~d~ 72 (480)
+|||+|+| +|++|.+++..|+.+ | ++|+++|++++. +..+..... ...++. ++|+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~---------------~~~v~~~~~t~d~ 70 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDT---------------GAVVRGFLGQQQL 70 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCS---------------SCEEEEEESHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccc---------------cceEEEEeCCCCH
Confidence 37999999 899999999999987 7 899999998762 222332110 113444 5578
Q ss_pred HHHhhcCCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 73 EKHVREANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++++++||+||+|.+.|.... ....|+ ..+++..+.+.++. ++.+|++ +|.|.+++-.
T Consensus 71 ~~al~gaDvVi~~ag~~~~~g----~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv-~SNPv~~~~~ 133 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPRKPG----MTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL-ISNPVNSTVP 133 (326)
T ss_dssp HHHHTTCSEEEECCCCCCCSS----CCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE-CCSSHHHHHH
T ss_pred HHHcCCCCEEEEcCCcCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-ECCchHHHHH
Confidence 888999999999998875431 112344 45566666666665 4555555 6899988543
No 144
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.53 E-value=1.2e-07 Score=94.65 Aligned_cols=105 Identities=11% Similarity=0.146 Sum_probs=77.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. + . ....+ .++++.++.||+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~-~-------------------~~~~~-~~l~ell~~aDv 200 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKG--D-H-------------------PDFDY-VSLEDLFKQSDV 200 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSS--C-C-------------------TTCEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCcchh--h-H-------------------hcccc-CCHHHHHhcCCE
Confidence 5899999999999999999987 99999999975421 1 0 01223 378888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 201 V~~~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g 250 (333)
T 1dxy_A 201 IDLHVPGIEQNTH-----IIN--------EAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSG 250 (333)
T ss_dssp EEECCCCCGGGTT-----SBC--------HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEcCCCchhHHH-----HhC--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999986432111 111 3355678999999999998777778888888764
No 145
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.52 E-value=1.3e-07 Score=95.38 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=77.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++.+..+ . + . ...+++++++.||+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~----~------------------~-~-~~~sl~ell~~aDi 173 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL--GIRTLLCDPPRAARG----D------------------E-G-DFRTLDELVQEADV 173 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHTT----C------------------C-S-CBCCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCChHHhc----c------------------C-c-ccCCHHHHHhhCCE
Confidence 5899999999999999999987 999999997543210 0 0 1 13578888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|..... ..+ ...+. -+.....+++++++|+.|+.++-..+.+.+.|++.
T Consensus 174 V~l~~Plt~~g------~~~-T~~li--~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 174 LTFHTPLYKDG------PYK-TLHLA--DETLIRRLKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp EEECCCCCCSS------TTC-CTTSB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCcCCccc------ccc-chhhc--CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999853220 000 11111 12355678999999999998887778888888764
No 146
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.51 E-value=4.8e-07 Score=89.35 Aligned_cols=118 Identities=18% Similarity=0.257 Sum_probs=73.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHh-cCCCEEEecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQC-RGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+.+ |. +|+++|+++++++.... ++....... ...++..+++. +++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~--------DL~~~~~~~~~~~~v~~~~~~-~a~~~ 69 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKAL--------DMRESSPIHGFDTRVTGTNDY-GPTED 69 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHH--------HHHHHHHHHTCCCEEEEESSS-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHH--------HHhccccccCCCcEEEECCCH-HHhCC
Confidence 8999999999999999999987 65 99999999987654321 011110000 11234445554 56999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||+|.+.|..+ +.+ +.| ...+++..+.|.++. ++.++++ -|.|..+.-.
T Consensus 70 aDvVii~ag~~~kp---G~~-R~dl~~~N~~i~~~i~~~i~~~~-p~a~viv-vtNPvd~~t~ 126 (314)
T 3nep_X 70 SDVCIITAGLPRSP---GMS-RDDLLAKNTEIVGGVTEQFVEGS-PDSTIIV-VANPLDVMTY 126 (314)
T ss_dssp CSEEEECCCC-----------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEE-CCSSHHHHHH
T ss_pred CCEEEECCCCCCCC---CCC-HHHHHHhhHHHHHHHHHHHHHhC-CCcEEEe-cCCchhHHHH
Confidence 99999999887543 111 222 344566666777765 4555544 3577776544
No 147
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.50 E-value=8.3e-07 Score=87.96 Aligned_cols=116 Identities=22% Similarity=0.288 Sum_probs=74.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHh-cCCCEEEecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQC-RGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.+|.+++..|+.+ +. ++.++|+++++++..... +.... .....+++.+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~d-----------l~~~~~~~~~~~v~~~~~~a~~~ 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALD-----------LEDAQAFTAPKKIYSGEYSDCKD 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH-----------HHGGGGGSCCCEEEECCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHH-----------HHHHHHhcCCeEEEECCHHHhCC
Confidence 7999999999999999999987 55 899999999887643220 00000 00233444444567999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|... | .+ +.|+ ..+++..+.+.++. ++.+|++ -|.|.++...
T Consensus 73 aDvVii~ag~~~~~-g--~~-R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNPv~~~t~ 129 (318)
T 1ez4_A 73 ADLVVITAGAPQKP-G--ES-RLDLVNKNLNILSSIVKPVVDSG-FDGIFLV-AANPVDILTY 129 (318)
T ss_dssp CSEEEECCCC--------------CHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHHHHH
T ss_pred CCEEEECCCCCCCC-C--CC-HHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-eCCcHHHHHH
Confidence 99999999887543 1 11 2233 55667777777775 4555555 3788887544
No 148
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.49 E-value=1.5e-07 Score=93.82 Aligned_cols=105 Identities=11% Similarity=0.115 Sum_probs=77.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. +.+ ...+ .++++.++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~~~--------------------~~~~-~~l~ell~~aDv 201 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM--GATVIGEDVFEIKG--IED--------------------YCTQ-VSLDEVLEKSDI 201 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCS--CTT--------------------TCEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCccHH--HHh--------------------cccc-CCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975421 100 1222 378888899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 202 V~~~~p~t~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 202 ITIHAPYIKENGA-----VVT--------RDFLKKMKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp EEECCCCCTTTCC-----SBC--------HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchHHHH-----HhC--------HHHHhhCCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 9999985322111 111 2345678999999999988777777888888764
No 149
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.49 E-value=1.8e-07 Score=94.66 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=77.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++.. ..+ .. ..++++.++.||+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~---~~g--------------------~~-~~~l~ell~~aDv 170 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL--GWKVLVCDPPRQAR---EPD--------------------GE-FVSLERLLAEADV 170 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHH---STT--------------------SC-CCCHHHHHHHCSE
T ss_pred CEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCChhhh---ccC--------------------cc-cCCHHHHHHhCCE
Confidence 5899999999999999999987 99999999865432 111 01 2467788899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ..+ +..+. -+...+.+++++++|+.|+.++-..+.+.+.+++.
T Consensus 171 V~l~~Plt~~g------~~~-T~~li--~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g 224 (380)
T 2o4c_A 171 ISLHTPLNRDG------EHP-TRHLL--DEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGG 224 (380)
T ss_dssp EEECCCCCSSS------SSC-CTTSB--CHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCcccc------ccc-hhhhc--CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999854320 000 11111 13456779999999999988777777788888764
No 150
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.49 E-value=1.4e-06 Score=86.33 Aligned_cols=119 Identities=17% Similarity=0.217 Sum_probs=75.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHh--cCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQC--RGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~--~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..++.+....+|+++|+++++.+....+ +.... .....+++++..+++++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~d-----------l~~~~~~~~~~~~i~~~~~~al~~ 74 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-----------FNHGKVFAPKPVDIWHGDYDDCRD 74 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-----------HHHHTTSSSSCCEEEECCGGGTTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhh-----------HHHHhhhcCCCeEEEcCcHHHhCC
Confidence 379999999999999999998872224899999998866543221 11110 01123333444556999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||+|.|.|... + .. ..| .+.+.+..+.+.++. ++.++++ -|.|.+....
T Consensus 75 aDvViia~~~~~~~-g--~~-r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv-~tNPv~~~~~ 131 (316)
T 1ldn_A 75 ADLVVICAGANQKP-G--ET-RLDLVDKNIAIFRSIVESVMASG-FQGLFLV-ATNPVDILTY 131 (316)
T ss_dssp CSEEEECCSCCCCT-T--TC-SGGGHHHHHHHHHHHHHHHHHHT-CCSEEEE-CSSSHHHHHH
T ss_pred CCEEEEcCCCCCCC-C--CC-HHHHHHcChHHHHHHHHHHHHHC-CCCEEEE-eCCchHHHHH
Confidence 99999999877543 1 11 222 244566667777776 4555554 4678776544
No 151
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.48 E-value=3.8e-07 Score=86.43 Aligned_cols=96 Identities=13% Similarity=0.216 Sum_probs=67.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-hcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-REA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~a 79 (480)
|||+|||+|.||..++..|.+. |++| .++|+++ +. .. .++|+++.+ .++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~--g~~lv~v~d~~~-~~------------------------~~--~~~~~~~l~~~~~ 51 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN--GFEIAAILDVRG-EH------------------------EK--MVRGIDEFLQREM 51 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSC-CC------------------------TT--EESSHHHHTTSCC
T ss_pred CEEEEECCCHHHHHHHHHHhcC--CCEEEEEEecCc-ch------------------------hh--hcCCHHHHhcCCC
Confidence 7999999999999999999875 8997 6899873 11 01 457888877 689
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccH---HHHHHHHHhh
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA---EAIEKILMHN 144 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~---~~l~~~l~~~ 144 (480)
|+|++|+|+.. ..+.+...++.|+.|+++||...... +++.+..++.
T Consensus 52 DvVv~~~~~~~------------------~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~ 101 (236)
T 2dc1_A 52 DVAVEAASQQA------------------VKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKT 101 (236)
T ss_dssp SEEEECSCHHH------------------HHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHH
T ss_pred CEEEECCCHHH------------------HHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhc
Confidence 99999987421 12222344567888998887654433 4565555544
No 152
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.46 E-value=9.8e-07 Score=91.85 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=57.8
Q ss_pred ceEEEECCChhH--HHHHHHHHHc--CCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYVG--GPTMAVIALK--CPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G--~~lA~~La~~--~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.|| .++|..|+.. .+|++|++||+++++++.++.. ...++.. ....+++.++|+++++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~--------~~~~l~~~~~~~~I~~ttD~~eal 75 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTI--------AKKYVEEVGADLKFEKTMNLDDVI 75 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHH--------HHHHhccCCCCcEEEEECCHHHHh
Confidence 699999999975 5556677642 1378999999999998875531 1122211 1235688899998889
Q ss_pred hcCCEEEEEccC
Q 011650 77 REANIVFVSVNT 88 (480)
Q Consensus 77 ~~aDvVii~Vpt 88 (480)
++||+||+++|.
T Consensus 76 ~dAD~VIiaagv 87 (480)
T 1obb_A 76 IDADFVINTAMV 87 (480)
T ss_dssp TTCSEEEECCCT
T ss_pred CCCCEEEECCCc
Confidence 999999999975
No 153
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.44 E-value=1.5e-06 Score=86.31 Aligned_cols=71 Identities=13% Similarity=0.254 Sum_probs=56.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-hc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-RE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~ 78 (480)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +....++|+++.+ .+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~~~~v~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-GEYQLVAIYSRKLETAATFASRY-----------------QNIQLFDQLEVFFKSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TSEEEEEEECSSHHHHHHHGGGS-----------------SSCEEESCHHHHHTSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHHc-----------------CCCeEeCCHHHHhCCC
Confidence 78999999999999999999875 467764 7899999887766421 2235678898877 68
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 63 ~D~V~i~tp~~ 73 (325)
T 2ho3_A 63 FDLVYIASPNS 73 (325)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEeCChH
Confidence 99999998854
No 154
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.43 E-value=1.4e-06 Score=90.70 Aligned_cols=81 Identities=12% Similarity=0.175 Sum_probs=59.3
Q ss_pred ceEEEECCChh-HHHHHHHHHHc--C-CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYV-GGPTMAVIALK--C-PSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~~--~-~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.+ |.++|..|+.+ . ++++|.+||+++++++.++.- .+.++.. ....+++.++|+++++
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~--------~~~~l~~~~~~~~I~~t~D~~eal 100 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGA--------CDVFIREKAPDIEFAATTDPEEAF 100 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHH--------HHHHHHHHCTTSEEEEESCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHH--------HHHHhccCCCCCEEEEECCHHHHH
Confidence 38999999999 55577777765 2 267999999999998876431 0111111 1234688889998889
Q ss_pred hcCCEEEEEccCCC
Q 011650 77 REANIVFVSVNTPT 90 (480)
Q Consensus 77 ~~aDvVii~Vptp~ 90 (480)
++||+||+++|++.
T Consensus 101 ~~AD~VViaag~~~ 114 (472)
T 1u8x_X 101 TDVDFVMAHIRVGK 114 (472)
T ss_dssp SSCSEEEECCCTTH
T ss_pred cCCCEEEEcCCCcc
Confidence 99999999998753
No 155
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.42 E-value=1.2e-06 Score=87.00 Aligned_cols=114 Identities=23% Similarity=0.333 Sum_probs=75.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHc---CCCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNS---DQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~---g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.+|.+++..|+.+ +. ++.++|+++++++.... ...++ ...++++.+..+++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~i~~~~~~a~ 74 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPF-------------TSPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------SCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHh-------------cCCeEEEECCHHHh
Confidence 7999999999999999999887 54 89999999988765322 11111 02334444445679
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++||+||++.+.|... | ..+.|+ ..+++..+.|.++. ++.+|++ -|.|.++...
T Consensus 75 ~~aDvVii~ag~~~k~-g---~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNPv~~~t~ 133 (326)
T 2zqz_A 75 KDADLVVITAGAPQKP-G---ETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLV-AANPVDILTY 133 (326)
T ss_dssp GGCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEE-CSSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE-eCCcHHHHHH
Confidence 9999999999887543 1 011233 45666677777776 4555555 3788887544
No 156
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.42 E-value=2.3e-06 Score=84.41 Aligned_cols=117 Identities=17% Similarity=0.275 Sum_probs=77.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc---CCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS---DQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~---g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.+|.+++..|+.+....++.++|+++++++.... ...++. ..-+++. ++ .+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~-----------~~~~v~~-~~-~~a~~~ 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFA-----------HPVWVWA-GS-YGDLEG 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGS-----------CCCEEEE-CC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhc-----------CCeEEEE-CC-HHHhCC
Confidence 7999999999999999999987333699999999987764322 101110 0112333 34 556999
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+||++.+.|... | . .+.| ...+++..+.+.++. ++.+|++ -|.|.++...+
T Consensus 68 aD~Vii~ag~~~~~-g--~-~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNPv~~~t~~ 125 (310)
T 2xxj_A 68 ARAVVLAAGVAQRP-G--E-TRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLV-ATNPVDVMTQV 125 (310)
T ss_dssp EEEEEECCCCCCCT-T--C-CHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHHHH
T ss_pred CCEEEECCCCCCCC-C--c-CHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEE-ecCchHHHHHH
Confidence 99999999887543 1 0 1112 345666677777775 4555555 37888876543
No 157
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.42 E-value=2.7e-07 Score=76.66 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=53.7
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|+|+|.+|..++..|.+. | ++|+++|+++++.+.+.......... .+.-..++.+++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~------------d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQV------------DAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEEC------------CTTCHHHHHHHTTTC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEEe------------cCCCHHHHHHHHcCC
Confidence 46899999999999999999998 8 99999999999988877322111000 000012344556789
Q ss_pred CEEEEEccC
Q 011650 80 NIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||.|+|.
T Consensus 71 d~vi~~~~~ 79 (118)
T 3ic5_A 71 DAVISAAPF 79 (118)
T ss_dssp SEEEECSCG
T ss_pred CEEEECCCc
Confidence 999999863
No 158
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.41 E-value=1.2e-06 Score=87.16 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=56.0
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+. .++. .+|+++.++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~------------------~~~~-~~~~~~~l~~~ 62 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGN-ADARLVAVADAFPAAAEAIAGA------------------YGCE-VRTIDAIEAAA 62 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHH------------------TTCE-ECCHHHHHHCT
T ss_pred ceEEEEECCCHHHHHHHHHHhhC-CCcEEEEEECCCHHHHHHHHHH------------------hCCC-cCCHHHHhcCC
Confidence 46899999999999999999875 578877 689999998877642 1234 678888877
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 63 ~~D~V~i~tp~~ 74 (331)
T 4hkt_A 63 DIDAVVICTPTD 74 (331)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCCch
Confidence 799999999864
No 159
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.40 E-value=1.1e-06 Score=87.77 Aligned_cols=70 Identities=17% Similarity=0.246 Sum_probs=57.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. + ....+|+++.++
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~-----------------g-~~~~~~~~~~l~~~ 64 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAAN-PDLELVVIADPFIEGAQRLAEAN-----------------G-AEAVASPDEVFARD 64 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHTT-----------------T-CEEESSHHHHTTCS
T ss_pred ceEEEEECCcHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc-----------------C-CceeCCHHHHhcCC
Confidence 36899999999999999999875 578877 6899999988776521 2 466789999887
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 65 ~~D~V~i~tp~~ 76 (344)
T 3euw_A 65 DIDGIVIGSPTS 76 (344)
T ss_dssp CCCEEEECSCGG
T ss_pred CCCEEEEeCCch
Confidence 899999999864
No 160
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.39 E-value=2.1e-06 Score=85.30 Aligned_cols=115 Identities=18% Similarity=0.261 Sum_probs=78.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcC---CCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSD---QLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g---~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
.|||+|||+|.||.++|..|+.+ |+ +|.++|+++++++..... ..++. ....+..++|+++
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~-----------~~~~i~~~~d~~~- 84 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFL-----------KTPKIVSSKDYSV- 84 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGC-----------SCCEEEECSSGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhcc-----------CCCeEEEcCCHHH-
Confidence 37999999999999999999988 65 999999999877753321 00110 0124566788874
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHH
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
+++||+||+|...|..+ |.+ +.|+ ..+++..+.|.++. ++.++++ -|.|..+.-
T Consensus 85 ~~~aDiVvi~aG~~~kp---G~t-R~dL~~~N~~I~~~i~~~i~~~~-p~a~vlv-vtNPvdi~t 143 (331)
T 4aj2_A 85 TANSKLVIITAGARQQE---GES-RLNLVQRNVNIFKFIIPNVVKYS-PQCKLLI-VSNPVDILT 143 (331)
T ss_dssp GTTEEEEEECCSCCCCT---TCC-GGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHH
T ss_pred hCCCCEEEEccCCCCCC---Ccc-HHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE-ecChHHHHH
Confidence 99999999999877543 112 3343 44566667777774 4555544 357776543
No 161
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.39 E-value=1e-06 Score=88.24 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=56.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+++.+.. +.....+|+++.++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~ 63 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI-DDAILYAISDVREDRLREMKEKL-----------------GVEKAYKDPHELIEDP 63 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS-TTEEEEEEECSCHHHHHHHHHHH-----------------TCSEEESSHHHHHHCT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHh-----------------CCCceeCCHHHHhcCC
Confidence 46999999999999999998874 578876 6899999888766410 11246788988887
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 64 ~~D~V~i~tp~~ 75 (344)
T 3ezy_A 64 NVDAVLVCSSTN 75 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCCc
Confidence 799999998864
No 162
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.39 E-value=2.8e-06 Score=83.77 Aligned_cols=118 Identities=22% Similarity=0.262 Sum_probs=79.0
Q ss_pred eEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHH-HhcCCCEEEecCHHHHhhcCC
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVK-QCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~aD 80 (480)
||+|||+|.||.++|..++.+ ++ +|.++|+++++++..... +..... ....-+++.|+|+ +++++||
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~--~l~el~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~aD 69 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR--GYDDLLLIARTPGKPQGEALD--------LAHAAAELGVDIRISGSNSY-EDMRGSD 69 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTCS
T ss_pred CEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCChhhHHHHHHH--------HHHhhhhcCCCeEEEECCCH-HHhCCCC
Confidence 799999999999999999987 66 799999998877643210 111100 0113457777887 5699999
Q ss_pred EEEEEccCCCCcCCCCCCC----CCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 81 IVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||++.+.|... | ..+ .-+...+++..+.+.++. ++.++++- |.|.+....
T Consensus 70 ~Vi~~ag~~~k~-G--~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~ 124 (308)
T 2d4a_B 70 IVLVTAGIGRKP-G--MTREQLLEANANTMADLAEKIKAYA-KDAIVVIT-TNPVDAMTY 124 (308)
T ss_dssp EEEECCSCCCCS-S--CCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHH
T ss_pred EEEEeCCCCCCC-C--CcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCchHHHHH
Confidence 999999887543 1 110 112334567777777776 55555553 678776544
No 163
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.38 E-value=6.9e-07 Score=87.95 Aligned_cols=69 Identities=14% Similarity=0.252 Sum_probs=54.3
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+++.+.. ++...+|+++.++++
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~------------------~~~~~~~~~~ll~~~ 67 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-ERFEFVGAFTPNKVKREKICSDY------------------RIMPFDSIESLAKKC 67 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-SSSEEEEEECSCHHHHHHHHHHH------------------TCCBCSCHHHHHTTC
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHHhcC
Confidence 58999999999996 78878764 578877 7999999988776420 122267888888899
Q ss_pred CEEEEEccCC
Q 011650 80 NIVFVSVNTP 89 (480)
Q Consensus 80 DvVii~Vptp 89 (480)
|+|++|+|+.
T Consensus 68 D~V~i~tp~~ 77 (308)
T 3uuw_A 68 DCIFLHSSTE 77 (308)
T ss_dssp SEEEECCCGG
T ss_pred CEEEEeCCcH
Confidence 9999999864
No 164
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.38 E-value=9.8e-07 Score=85.63 Aligned_cols=93 Identities=14% Similarity=0.184 Sum_probs=70.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|.+. |++|+++|+++++.+++.+.. ++.+.++++++++++|+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~------------------g~~~~~~~~~~~~~aDi 189 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKF------------------PLEVVNSPEEVIDKVQV 189 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTS------------------CEEECSCGGGTGGGCSE
T ss_pred CEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHc------------------CCeeehhHHhhhcCCCE
Confidence 6899999999999999999998 889999999999988876421 24455577777889999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
||.|+|.+...+ ... .+ . .+.++++++|++.++
T Consensus 190 Vi~atp~~~~~~------~~~--~i----~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 190 IVNTTSVGLKDE------DPE--IF----N--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp EEECSSTTSSTT------CCC--SS----C--GGGCCTTSEEEESSS
T ss_pred EEEeCCCCCCCC------CCC--CC----C--HHHcCCCCEEEEcCC
Confidence 999998654210 000 01 0 245778999988776
No 165
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.37 E-value=1.8e-06 Score=85.66 Aligned_cols=113 Identities=24% Similarity=0.347 Sum_probs=72.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcC---CCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSD---QLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g---~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.||.++|..|+.+ |. ++.++|+++++++..... ..++ ....+++++..+++
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~~i~~~~~~a~ 74 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPF-------------TSPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------SCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhh-------------cCCcEEEECcHHHh
Confidence 7999999999999999999987 66 899999999887744321 1111 02334444444569
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHH
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
++||+||++.+.|..+ |.+ +.| ...+++..+.+.++.+ +.++++ -|.|..+..
T Consensus 75 ~~aDiVvi~ag~~~kp---G~t-R~dL~~~N~~I~~~i~~~i~~~~p-~a~ilv-vtNPvdi~t 132 (326)
T 3vku_A 75 KDADLVVITAGAPQKP---GET-RLDLVNKNLKILKSIVDPIVDSGF-NGIFLV-AANPVDILT 132 (326)
T ss_dssp TTCSEEEECCCCC--------------------CHHHHHHHHHTTTC-CSEEEE-CSSSHHHHH
T ss_pred cCCCEEEECCCCCCCC---Cch-HHHHHHHHHHHHHHHHHHHHhcCC-ceEEEE-ccCchHHHH
Confidence 9999999999877543 111 222 2445677777777665 555544 357777543
No 166
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.37 E-value=2.5e-06 Score=83.87 Aligned_cols=111 Identities=18% Similarity=0.277 Sum_probs=71.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|||+|.||..+|..++.+ |+ +|.++|++++...... ++.. ....+++.++|+ +++++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~~~~g~a~------------dl~~-~~~~~i~~t~d~-~~l~~ 77 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSEGTKGATM------------DLEI-FNLPNVEISKDL-SASAH 77 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC-----CHH------------HHHH-HTCTTEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCcchHHHHH------------HHhh-hcCCCeEEeCCH-HHHCC
Confidence 57999999999999999999988 77 9999999985211110 1111 122368888898 56999
Q ss_pred CCEEEEEccCCCCcCCCCCCC----CCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||+||+++..+ .. | .++ .-+...+++.++.+.++. ++.++++ -|.|...
T Consensus 78 aD~Vi~aag~~-~p-G--~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~sNP~~~ 130 (303)
T 2i6t_A 78 SKVVIFTVNSL-GS-S--QSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV-ASQPVEI 130 (303)
T ss_dssp CSEEEECCCC--------CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE-CSSSHHH
T ss_pred CCEEEEcCCCC-CC-C--CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-cCChHHH
Confidence 99999998654 11 1 010 112334567777888877 5666655 3556554
No 167
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.37 E-value=3.7e-07 Score=79.49 Aligned_cols=70 Identities=11% Similarity=0.304 Sum_probs=57.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..++..|... |++|+++|+++++.+.+.+.. .......+++++++.++|+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~----------------~~~~~~~~~~~~~~~~~Di 83 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKY----------------EYEYVLINDIDSLIKNNDV 83 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHH----------------TCEEEECSCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHh----------------CCceEeecCHHHHhcCCCE
Confidence 5899999999999999999887 889999999999988765410 0123456788888899999
Q ss_pred EEEEccCC
Q 011650 82 VFVSVNTP 89 (480)
Q Consensus 82 Vii~Vptp 89 (480)
||.|+|.+
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99999865
No 168
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.36 E-value=1.5e-06 Score=87.34 Aligned_cols=71 Identities=14% Similarity=0.244 Sum_probs=56.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
++||+|||+|.||..++..|.+..++++++ ++|+++++.+++.+. -++...+|+++.++
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~------------------~~~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER------------------TGARGHASLTDMLAQT 74 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH------------------HCCEEESCHHHHHHHC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH------------------cCCceeCCHHHHhcCC
Confidence 368999999999999999998753477866 789999998876641 12467889999876
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 75 ~~D~V~i~tp~~ 86 (354)
T 3q2i_A 75 DADIVILTTPSG 86 (354)
T ss_dssp CCSEEEECSCGG
T ss_pred CCCEEEECCCcH
Confidence 799999999864
No 169
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.35 E-value=3.5e-06 Score=82.26 Aligned_cols=119 Identities=19% Similarity=0.228 Sum_probs=76.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHh-cCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQC-RGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.+|.++|..|+.+..-.++.++|+++++.+.... ++....... ...++..++|+++ +++||
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~--------DL~h~~~~~~~~~~i~~~~d~~~-~~~aD 71 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAM--------DLAHAAAGIDKYPKIVGGADYSL-LKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHH--------HHHHHHGGGTCCCEEEEESCGGG-GTTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhh--------hhhcccccCCCCCeEecCCCHHH-hCCCC
Confidence 8999999999999999999877223489999999876553221 011000000 1134566778765 99999
Q ss_pred EEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHH
Q 011650 81 IVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
+|+++-..|..+ |.+ +.| .+.+++..+.|.++.+. .+|++ -|.|..+.-
T Consensus 72 vVvitAG~prkp---Gmt-R~dLl~~Na~I~~~i~~~i~~~~p~-aivlv-vsNPvd~~t 125 (294)
T 2x0j_A 72 IIVVTAGLARKP---GMT-RLDLAHKNAGIIKDIAKKIVENAPE-SKILV-VTNPMDVMT 125 (294)
T ss_dssp EEEECCCCCCCS---SSC-HHHHHHHHHHHHHHHHHHHHTTSTT-CEEEE-CSSSHHHHH
T ss_pred EEEEecCCCCCC---CCc-hHHHHHHHHHHHHHHHHHHHhcCCc-eEEEE-ecCcchhhH
Confidence 999998877644 111 222 34456666777777654 44433 467877643
No 170
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.33 E-value=3.1e-06 Score=83.11 Aligned_cols=95 Identities=14% Similarity=0.233 Sum_probs=70.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|+++|+++++.+.+.+.. ....-..++++.+++||+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g-----------------~~~~~~~~l~~~l~~aDv 218 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMG-----------------LVPFHTDELKEHVKDIDI 218 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT-----------------CEEEEGGGHHHHSTTCSE
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCC-----------------CeEEchhhHHHHhhCCCE
Confidence 5899999999999999999987 899999999998776654310 011112467777899999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|... .+ . .....++++.++++.+..+.++
T Consensus 219 Vi~~~p~~~----------i~----~----~~~~~mk~g~~lin~a~g~~~~ 252 (300)
T 2rir_A 219 CINTIPSMI----------LN----Q----TVLSSMTPKTLILDLASRPGGT 252 (300)
T ss_dssp EEECCSSCC----------BC----H----HHHTTSCTTCEEEECSSTTCSB
T ss_pred EEECCChhh----------hC----H----HHHHhCCCCCEEEEEeCCCCCc
Confidence 999998532 11 1 2345688999999988766655
No 171
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.32 E-value=1.1e-06 Score=76.18 Aligned_cols=98 Identities=18% Similarity=0.216 Sum_probs=69.3
Q ss_pred ceEEEECC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.||..++.+|.+. |++|+.++.+.+.+ .+..+..+++++..
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i------------------------~G~~~~~s~~el~~ 68 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI------------------------EGLKCYRSVRELPK 68 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE------------------------TTEECBSSGGGSCT
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE------------------------CCeeecCCHHHhCC
Confidence 47999999 99999999999998 99866666542111 13566778888667
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
.+|++++|+|. ..+.++++++.+ ...+.+++..||. .+++.+..++.+
T Consensus 69 ~vDlvii~vp~---------------~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~G 116 (138)
T 1y81_A 69 DVDVIVFVVPP---------------KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAG 116 (138)
T ss_dssp TCCEEEECSCH---------------HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHHT
T ss_pred CCCEEEEEeCH---------------HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHCC
Confidence 89999999983 234666766665 4455677765553 466766666654
No 172
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.31 E-value=2.7e-06 Score=85.10 Aligned_cols=71 Identities=20% Similarity=0.292 Sum_probs=56.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCC-CEEEecCHHHHhhc-
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGK-NLFFSTDVEKHVRE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~-~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||..++..|.++.++++++ ++|+++++.+++.+.. + .....+|+++.+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~ll~~~ 65 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQY-----------------QLNATVYPNDDSLLADE 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHT-----------------TCCCEEESSHHHHHHCT
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 59999999999999999998333578876 6899999988776421 1 14567899998765
Q ss_pred -CCEEEEEccCC
Q 011650 79 -ANIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 66 ~~D~V~i~tp~~ 77 (344)
T 3mz0_A 66 NVDAVLVTSWGP 77 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEECCCch
Confidence 89999999864
No 173
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.31 E-value=4.9e-06 Score=82.82 Aligned_cols=116 Identities=15% Similarity=0.245 Sum_probs=78.1
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCC-------eEEEEeCC----HHHHHH----HHcCCCCCCCCChHHHHHHhcCCC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSI-------EVAVVDIS----VPRINA----WNSDQLPIYEPGLEEVVKQCRGKN 65 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~-------~V~~~D~~----~~~v~~----l~~g~~~~~e~~l~~~~~~~~~~~ 65 (480)
|||+|+|+ |.+|.+++..|+.+ |+ +|.++|++ +++.+. +.....++ .+.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-------------~~~ 70 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-------------LAG 70 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-------------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-------------cCc
Confidence 79999997 99999999999887 64 89999999 655543 33321111 135
Q ss_pred EEEecCHHHHhhcCCEEEEEccCCCCcCCCCCCC----CCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 66 LFFSTDVEKHVREANIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 66 l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++.+++..+++++||+||++...|... + .++ ..+...+++.++.+.++..++..+++.| .|.++...
T Consensus 71 i~~~~~~~~al~~aD~Vi~~ag~~~~~-g--~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~ 141 (329)
T 1b8p_A 71 MTAHADPMTAFKDADVALLVGARPRGP-G--MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAY 141 (329)
T ss_dssp EEEESSHHHHTTTCSEEEECCCCCCCT-T--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHH
T ss_pred EEEecCcHHHhCCCCEEEEeCCCCCCC-C--CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHH
Confidence 677889888899999999998766432 1 010 0122345566677777753455665544 78776544
No 174
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.30 E-value=4.2e-06 Score=81.85 Aligned_cols=93 Identities=13% Similarity=0.148 Sum_probs=69.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEE--ecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFF--STDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~a~~~a 79 (480)
++|+|||+|.||..+|..+... |.+|+++|+++++.+.+.+- + ... ..++++.++++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------------------g-~~~~~~~~l~~~l~~a 214 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEM------------------G-MEPFHISKAAQELRDV 214 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT------------------T-SEEEEGGGHHHHTTTC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHC------------------C-CeecChhhHHHHhcCC
Confidence 5899999999999999999987 89999999998876655431 1 111 24667778999
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+|++|+|... .+ . .....++++.++++.+..+.++
T Consensus 215 DvVi~~~p~~~----------i~----~----~~l~~mk~~~~lin~ar~~~~~ 250 (293)
T 3d4o_A 215 DVCINTIPALV----------VT----A----NVLAEMPSHTFVIDLASKPGGT 250 (293)
T ss_dssp SEEEECCSSCC----------BC----H----HHHHHSCTTCEEEECSSTTCSB
T ss_pred CEEEECCChHH----------hC----H----HHHHhcCCCCEEEEecCCCCCC
Confidence 99999997532 11 1 1234578899999988766555
No 175
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.29 E-value=1.9e-06 Score=86.64 Aligned_cols=70 Identities=11% Similarity=0.154 Sum_probs=54.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh--hc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV--RE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~--~~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. ++...+|+++++ .+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-EKLKLVTCYSRTEDKREKFGKRY------------------NCAGDATMEALLARED 66 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEECSSHHHHHHHHHHH------------------TCCCCSSHHHHHHCSS
T ss_pred ceEEEEccCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHhcCCC
Confidence 4899999999999999998864 578865 7899999988765410 122367888877 56
Q ss_pred CCEEEEEccCCC
Q 011650 79 ANIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 67 ~D~V~i~tp~~~ 78 (354)
T 3db2_A 67 VEMVIITVPNDK 78 (354)
T ss_dssp CCEEEECSCTTS
T ss_pred CCEEEEeCChHH
Confidence 899999998754
No 176
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.28 E-value=4.9e-06 Score=73.22 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=36.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 6899999999999999999998 899999999998887665
No 177
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.24 E-value=1.8e-06 Score=85.87 Aligned_cols=70 Identities=7% Similarity=0.088 Sum_probs=54.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+++.+.. +..+.++|+++.+. +
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-AQAEVRGIASRRLENAQKMAKEL-----------------AIPVAYGSYEELCKDET 67 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-SSEEEEEEBCSSSHHHHHHHHHT-----------------TCCCCBSSHHHHHHCTT
T ss_pred EEEEEECchHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHHc-----------------CCCceeCCHHHHhcCCC
Confidence 5899999999999999999885 477877 6799999888766421 11134678888776 7
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 68 ~D~V~i~tp~~ 78 (330)
T 3e9m_A 68 IDIIYIPTYNQ 78 (330)
T ss_dssp CSEEEECCCGG
T ss_pred CCEEEEcCCCH
Confidence 99999998864
No 178
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.24 E-value=2.7e-06 Score=84.00 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=52.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
|||+|||+|.||..++..|.+. +++++ .++|+++++.+.+.+. +...+|++++++ +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-~~~~~v~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~~ 69 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-PGAALVRLASSNPDNLALVPPG--------------------CVIESDWRSVVSAPE 69 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-TTEEEEEEEESCHHHHTTCCTT--------------------CEEESSTHHHHTCTT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHhh--------------------CcccCCHHHHhhCCC
Confidence 6899999999999999999875 46775 4899999876544321 345678888775 7
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 70 ~D~V~i~tp~~ 80 (315)
T 3c1a_A 70 VEAVIIATPPA 80 (315)
T ss_dssp CCEEEEESCGG
T ss_pred CCEEEEeCChH
Confidence 99999998853
No 179
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.24 E-value=4.8e-06 Score=71.83 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=39.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSD 45 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g 45 (480)
|++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~ 48 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE 48 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC
Confidence 45799999999999999999998 99999999999999988753
No 180
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.23 E-value=5.1e-06 Score=83.35 Aligned_cols=108 Identities=10% Similarity=0.039 Sum_probs=76.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..++..|....+..+|++||+++++.+++.+..... ++ -.+..+++++++++++|+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~--~g----------~~~~~~~~~~eav~~aDi 197 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY--SG----------LTIRRASSVAEAVKGVDI 197 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC--TT----------CEEEECSSHHHHHTTCSE
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhc--cC----------ceEEEeCCHHHHHhcCCE
Confidence 589999999999999988865333579999999999998876421000 00 124567889998999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHH
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEK 139 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~ 139 (480)
|++|+|++... +-+ . ...+++|+.|+..+|..|+. +++.+
T Consensus 198 Vi~aTps~~~~--------pvl-------~--~~~l~~G~~V~~vgs~~p~~-~El~~ 237 (350)
T 1x7d_A 198 ITTVTADKAYA--------TII-------T--PDMLEPGMHLNAVGGDCPGK-TELHA 237 (350)
T ss_dssp EEECCCCSSEE--------EEE-------C--GGGCCTTCEEEECSCCBTTB-EEECH
T ss_pred EEEeccCCCCC--------cee-------c--HHHcCCCCEEEECCCCCCCc-eeeCH
Confidence 99999864211 101 0 14678999999999887774 33433
No 181
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.23 E-value=2e-06 Score=82.83 Aligned_cols=103 Identities=19% Similarity=0.162 Sum_probs=72.1
Q ss_pred eEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCEE
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANIV 82 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDvV 82 (480)
+|+|||+|.||.++|..|.+. |++|+++|+++++.+.+.+.. + .. .++++++ +++|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~-----------------~-~~-~~~~~~~-~~~Div 175 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEF-----------------G-LR-AVPLEKA-REARLL 175 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH-----------------T-CE-ECCGGGG-GGCSEE
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-----------------c-cc-hhhHhhc-cCCCEE
Confidence 699999999999999999998 889999999998887765310 1 12 3466776 899999
Q ss_pred EEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHh
Q 011650 83 FVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMH 143 (480)
Q Consensus 83 ii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
|+|+|.+... +.. ..+. .+.++++++|++.++.+..+ + +.+..++
T Consensus 176 i~~tp~~~~~---------~~~---~~l~--~~~l~~g~~viD~~~~p~~t-~-l~~~a~~ 220 (263)
T 2d5c_A 176 VNATRVGLED---------PSA---SPLP--AELFPEEGAAVDLVYRPLWT-R-FLREAKA 220 (263)
T ss_dssp EECSSTTTTC---------TTC---CSSC--GGGSCSSSEEEESCCSSSSC-H-HHHHHHH
T ss_pred EEccCCCCCC---------CCC---CCCC--HHHcCCCCEEEEeecCCccc-H-HHHHHHH
Confidence 9999865321 100 0010 34578899998887765544 3 4444444
No 182
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.23 E-value=5.5e-06 Score=82.70 Aligned_cols=72 Identities=14% Similarity=0.224 Sum_probs=54.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
++||+|||+|.||..++..|..+.+++++ .++|+++++.+.+.+.. +...+.+|+++.++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~ 70 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL-----------------GVETTYTNYKDMIDTE 70 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT-----------------CCSEEESCHHHHHTTS
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCC
Confidence 36899999999999999998822247775 57899999987765421 11145678888776
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 71 ~~D~V~i~tp~~ 82 (346)
T 3cea_A 71 NIDAIFIVAPTP 82 (346)
T ss_dssp CCSEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 699999998854
No 183
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.22 E-value=4.3e-06 Score=86.56 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=59.1
Q ss_pred ceEEEECCChh-HHHHHHHHHH--cC-CCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEecCHHH
Q 011650 2 VKICCIGAGYV-GGPTMAVIAL--KC-PSIEVAVVDISV--PRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFSTDVEK 74 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~--~~-~G~~V~~~D~~~--~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~ 74 (480)
|||+|||+|.+ |.+++..|+. .. ++++|++||+++ ++++.++.- ...++.. ....+++.++|+++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~--------~~~~~~~~~~~~~i~~t~D~~e 79 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGAL--------AKRMVEKAGVPIEIHLTLDRRR 79 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHH--------HHHHHhhcCCCcEEEEeCCHHH
Confidence 69999999999 8888888886 21 257999999999 887774420 0111111 11345788899988
Q ss_pred HhhcCCEEEEEccCCC
Q 011650 75 HVREANIVFVSVNTPT 90 (480)
Q Consensus 75 a~~~aDvVii~Vptp~ 90 (480)
++++||+||+++|.+.
T Consensus 80 al~gAD~VVitagv~~ 95 (450)
T 1s6y_A 80 ALDGADFVTTQFRVGG 95 (450)
T ss_dssp HHTTCSEEEECCCTTH
T ss_pred HhCCCCEEEEcCCCCC
Confidence 8999999999998753
No 184
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.20 E-value=6.4e-06 Score=82.92 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=53.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+...+- ++...+|+++.++ +
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~a~~~-------------------g~~~~~~~~~ll~~~~ 65 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-DNLEVHGVFDILAEKREAAAQK-------------------GLKIYESYEAVLADEK 65 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-TTEEEEEEECSSHHHHHHHHTT-------------------TCCBCSCHHHHHHCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHhc-------------------CCceeCCHHHHhcCCC
Confidence 4799999999999999988765 578876 579999887654331 2345678888776 7
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 66 ~D~V~i~tp~~ 76 (359)
T 3e18_A 66 VDAVLIATPND 76 (359)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEEcCCcH
Confidence 89999998864
No 185
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.20 E-value=5.8e-06 Score=71.52 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=52.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHHHhcCCCEEEecCHHH-Hhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIY--EPGLEEVVKQCRGKNLFFSTDVEK-HVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~-a~~~ 78 (480)
++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+++...... +....+.+ ++ .+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l--------------~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIM--------------QLAHLEC 71 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHH--------------HHTTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHH--------------HhcCccc
Confidence 4799999999999999999998 9999999999999998876322211 11111111 11 1568
Q ss_pred CCEEEEEccC
Q 011650 79 ANIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|++|+|+|+
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 9999999875
No 186
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.20 E-value=5.1e-06 Score=83.12 Aligned_cols=72 Identities=13% Similarity=0.155 Sum_probs=54.1
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
|+||||||+|.||.. ++..+... ++.+|+ ++|+++++.+++.+.. +-.++.+|+++.++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~-~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~ell~~ 84 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDA-ENCVVTAIASRDLTRAREMADRF-----------------SVPHAFGSYEEMLAS 84 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC-SSEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHHHHHHC
T ss_pred ccEEEEEcChHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc-----------------CCCeeeCCHHHHhcC
Confidence 689999999999975 45566654 577876 5899999988876520 11256789999775
Q ss_pred -cCCEEEEEccCCC
Q 011650 78 -EANIVFVSVNTPT 90 (480)
Q Consensus 78 -~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 85 ~~iDaV~I~tP~~~ 98 (350)
T 4had_A 85 DVIDAVYIPLPTSQ 98 (350)
T ss_dssp SSCSEEEECSCGGG
T ss_pred CCCCEEEEeCCCch
Confidence 5799999998654
No 187
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.19 E-value=6.1e-06 Score=85.16 Aligned_cols=76 Identities=18% Similarity=0.181 Sum_probs=57.4
Q ss_pred ceEEEECCChh--HHHHHHHHHHcC--CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 2 VKICCIGAGYV--GGPTMAVIALKC--PSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGlG~~--G~~lA~~La~~~--~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|||+|||+|.| |..++..|+... .| +|++||+++++++.++.-...+.. ...++++|+|++++++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~----------~~~~I~~TtD~~eAl~ 74 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGN----------GRWRYEAVSTLKKALS 74 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTT----------SCEEEEEESSHHHHHT
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhc----------cCCeEEEECCHHHHhc
Confidence 59999999996 678888888621 26 999999999888765531111111 1246889999999999
Q ss_pred cCCEEEEEccC
Q 011650 78 EANIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
+||+||++++.
T Consensus 75 dADfVI~airv 85 (450)
T 3fef_A 75 AADIVIISILP 85 (450)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEecccc
Confidence 99999999973
No 188
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.19 E-value=5.7e-06 Score=83.21 Aligned_cols=71 Identities=20% Similarity=0.289 Sum_probs=55.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCC-CEEEecCHHHHhh--
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGK-NLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~-~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||..++..|....++++|+ ++|+++++.+++.+.. + .....+|+++.++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~ll~~~ 86 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY-----------------AIEAKDYNDYHDLINDK 86 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH-----------------TCCCEEESSHHHHHHCT
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 48999999999999999998433578876 6899999887766420 1 2456789998876
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 87 ~~D~V~i~tp~~ 98 (357)
T 3ec7_A 87 DVEVVIITASNE 98 (357)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCcH
Confidence 589999999864
No 189
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.18 E-value=7.3e-06 Score=82.53 Aligned_cols=70 Identities=11% Similarity=0.140 Sum_probs=54.3
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc-
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. ++..|.+. ++.+|+ ++|+++++.+++.+.. +.....+|+++.+++
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 67 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-QDIRIVAACDSDLERARRVHRFI-----------------SDIPVLDNVPAMLNQV 67 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-TTEEEEEEECSSHHHHGGGGGTS-----------------CSCCEESSHHHHHHHS
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHhc-----------------CCCcccCCHHHHhcCC
Confidence 48999999999985 78888764 578876 7899999988776531 224567899988764
Q ss_pred -CCEEEEEccCC
Q 011650 79 -ANIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 68 ~vD~V~i~tp~~ 79 (359)
T 3m2t_A 68 PLDAVVMAGPPQ 79 (359)
T ss_dssp CCSEEEECSCHH
T ss_pred CCCEEEEcCCcH
Confidence 59999998853
No 190
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.17 E-value=7.5e-06 Score=82.15 Aligned_cols=69 Identities=12% Similarity=0.185 Sum_probs=54.0
Q ss_pred ceEEEECCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||. .++..|.+. ++++|+ ++|+++++.+++.+. -++...+|+++.++
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~~ll~~~ 88 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-PLTEVTAIASRRWDRAKRFTER------------------FGGEPVEGYPALLERD 88 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-TTEEEEEEEESSHHHHHHHHHH------------------HCSEEEESHHHHHTCT
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-CCeEEEEEEcCCHHHHHHHHHH------------------cCCCCcCCHHHHhcCC
Confidence 5899999999998 788888875 578876 689999988876541 02344588888775
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 89 ~~D~V~i~tp~~ 100 (350)
T 3rc1_A 89 DVDAVYVPLPAV 100 (350)
T ss_dssp TCSEEEECCCGG
T ss_pred CCCEEEECCCcH
Confidence 589999998864
No 191
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.14 E-value=1.9e-06 Score=75.37 Aligned_cols=98 Identities=12% Similarity=0.019 Sum_probs=67.4
Q ss_pred ceEEEECC----ChhHHHHHHHHHHcCCCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISV--PRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~--~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
.+|+|||+ |.||..++.+|.+. |++|+.++.+. +.+ .++.+..++++.
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~~g~~i------------------------~G~~~~~sl~el 67 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKVAGKTL------------------------LGQQGYATLADV 67 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSSTTSEE------------------------TTEECCSSTTTC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCccccccc------------------------CCeeccCCHHHc
Confidence 47999999 89999999999998 89977666543 111 135566677775
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
...+|++++|+|.+ .+.++++++.+ ...+.+++..||. .+++.+..++.+
T Consensus 68 ~~~~Dlvii~vp~~---------------~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~G 117 (145)
T 2duw_A 68 PEKVDMVDVFRNSE---------------AAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREAG 117 (145)
T ss_dssp SSCCSEEECCSCST---------------HHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTTT
T ss_pred CCCCCEEEEEeCHH---------------HHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHcC
Confidence 56899999999832 24666666665 3445566654443 466766666553
No 192
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.14 E-value=4.4e-06 Score=82.75 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=50.2
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-hc
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-RE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~ 78 (480)
||||+|||+|.||.. ++..|.+. ++++|+++|+++++.+++.+.. +.-....+..+.+ .+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~-~~~~l~v~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~ 63 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRY-----------------RVSATCTDYRDVLQYG 63 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHT-----------------TCCCCCSSTTGGGGGC
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHc-----------------CCCccccCHHHHhhcC
Confidence 369999999999984 88888764 4788889999999988776421 0001012223345 68
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 64 ~D~V~i~tp~~ 74 (323)
T 1xea_A 64 VDAVMIHAATD 74 (323)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEECCch
Confidence 99999999854
No 193
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.13 E-value=5.8e-06 Score=78.52 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=66.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|+|+|.||..++..+... ++++.+ +|++++. . .++.+++|+++.+ ++
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~-------------------~gv~v~~dl~~l~-~~ 55 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----T-------------------TPYQQYQHIADVK-GA 55 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC--------------------------CCSCBCSCTTTCT-TC
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----c-------------------CCCceeCCHHHHh-CC
Confidence 68999999999999999999887 447665 7887542 0 1234567777766 99
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|++|-+.. | ..+.+.+ . +..+.-+|+.+| |.+++-.+.+++.. ....++++|.+.
T Consensus 56 DVvIDft~-p-----------------~a~~~~~-~-l~~g~~vVigTT---G~s~e~~~~l~~aa--~~~~v~~a~N~S 110 (243)
T 3qy9_A 56 DVAIDFSN-P-----------------NLLFPLL-D-EDFHLPLVVATT---GEKEKLLNKLDELS--QNMPVFFSANMS 110 (243)
T ss_dssp SEEEECSC-H-----------------HHHHHHH-T-SCCCCCEEECCC---SSHHHHHHHHHHHT--TTSEEEECSSCC
T ss_pred CEEEEeCC-h-----------------HHHHHHH-H-HhcCCceEeCCC---CCCHHHHHHHHHHH--hcCCEEEECCcc
Confidence 99885532 2 1222333 3 666766666555 34433223344333 234677888764
No 194
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.12 E-value=1.3e-05 Score=80.92 Aligned_cols=67 Identities=19% Similarity=0.353 Sum_probs=50.8
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++++-. +...+.+|+++.++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 66 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-PGLNLAFVASRDEEKVKRDL--------------------PDVTVIASPEAAVQHP 66 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESCHHHHHTCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCcEECCHHHHhcCC
Confidence 58999999999997 56666553 578876 6799998765211 23567789999887
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 67 ~~D~V~i~tp~~ 78 (364)
T 3e82_A 67 DVDLVVIASPNA 78 (364)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 789999998864
No 195
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.12 E-value=3.1e-06 Score=84.68 Aligned_cols=108 Identities=12% Similarity=0.142 Sum_probs=66.6
Q ss_pred CceEEEECCChhHHHHHHH-HHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGPTMAV-IALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~-La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|||+|.||..+... +....++++|+ ++|+++++.+...+ .......+|+++.+++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~------------------~~~~~~~~~~~~ll~~ 63 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPI------------------YSHIHFTSDLDEVLND 63 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGG------------------GTTCEEESCTHHHHTC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHh------------------cCCCceECCHHHHhcC
Confidence 4699999999999864333 43333578877 78998776532221 0235677899998765
Q ss_pred --CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC--CcccHHHHHHHHHhh
Q 011650 79 --ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV--PVKTAEAIEKILMHN 144 (480)
Q Consensus 79 --aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv--~~gt~~~l~~~l~~~ 144 (480)
.|+|++|+|+..+ .+.+...+..|+-|+++.-+ .....+++.+..++.
T Consensus 64 ~~~D~V~i~tp~~~h------------------~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (345)
T 3f4l_A 64 PDVKLVVVCTHADSH------------------FEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSK 115 (345)
T ss_dssp TTEEEEEECSCGGGH------------------HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCChHHH------------------HHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 8999999886432 11122334457777776522 333334454444443
No 196
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.11 E-value=6e-06 Score=81.59 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=51.0
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++.+++++++...++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~l~~~~ 66 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-SDWTLQGAWSPTRAKALPICESW------------------RIPYADSLSSLAASC 66 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-SSEEEEEEECSSCTTHHHHHHHH------------------TCCBCSSHHHHHTTC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCccCcHHHhhcCC
Confidence 58999999999996 88878753 478876 8999998877655310 112456776644689
Q ss_pred CEEEEEccCC
Q 011650 80 NIVFVSVNTP 89 (480)
Q Consensus 80 DvVii~Vptp 89 (480)
|+|++|+|+.
T Consensus 67 D~V~i~tp~~ 76 (319)
T 1tlt_A 67 DAVFVHSSTA 76 (319)
T ss_dssp SEEEECSCTT
T ss_pred CEEEEeCCch
Confidence 9999999854
No 197
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.11 E-value=1.8e-05 Score=79.59 Aligned_cols=74 Identities=16% Similarity=0.279 Sum_probs=55.0
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+|||+|||+|.||..++..|... +++++ .++|+++++.+.+.+... + .......+|+++.++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~-~~~~lv~v~d~~~~~~~~~a~~~~-~-------------~~~~~~~~~~~~ll~~~ 70 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANN-Y-------------PESTKIHGSYESLLEDP 70 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTT-C-------------CTTCEEESSHHHHHHCT
T ss_pred ceEEEEECchHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhC-C-------------CCCCeeeCCHHHHhcCC
Confidence 36899999999999999988874 46776 478999998877654210 0 002356788888776
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 71 ~~D~V~i~tp~~ 82 (362)
T 1ydw_A 71 EIDALYVPLPTS 82 (362)
T ss_dssp TCCEEEECCCGG
T ss_pred CCCEEEEcCChH
Confidence 589999998854
No 198
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.11 E-value=5.4e-06 Score=84.19 Aligned_cols=113 Identities=21% Similarity=0.230 Sum_probs=71.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEE--E--------ecC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLF--F--------STD 71 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~--~--------t~d 71 (480)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+...++.-.....+... . ..+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 3899999999999999998887 899999999999888777522221111000000000000000 0 125
Q ss_pred HHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 72 VEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++++++++|+||.|+..|-.. .|.+ +.++..+.++++.+||+.|.
T Consensus 269 l~e~l~~aDVVI~tvlipg~~-------ap~L-----vt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRP-------APRL-----VTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSC-------CCCC-----BCHHHHTTSCTTCEEEETTG
T ss_pred HHHHhcCCCEEEECCcCCCCC-------CCEE-----ecHHHHhcCCCCCEEEEEeC
Confidence 677789999999997554321 2221 13456677899999998763
No 199
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.11 E-value=1.1e-05 Score=69.23 Aligned_cols=41 Identities=32% Similarity=0.481 Sum_probs=37.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
++|.|+|+|.+|..++..|.+. |++|+++|+++++++.+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~ 47 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYAS 47 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4699999999999999999998 8999999999988877654
No 200
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.10 E-value=1.3e-05 Score=83.07 Aligned_cols=99 Identities=9% Similarity=0.024 Sum_probs=72.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|+++|+++.+....... ++++ .+++++++.||+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~--G~~Viv~d~~~~~~~~a~~~-------------------g~~~-~~l~ell~~aDi 315 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVME-------------------GFNV-VTLDEIVDKGDF 315 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--cCEEEEEeCChhhHHHHHHc-------------------CCEe-cCHHHHHhcCCE
Confidence 4799999999999999999987 99999999998775332221 1233 478888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcc-cHHHHHH
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVK-TAEAIEK 139 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-t~~~l~~ 139 (480)
|++|+.|.. ..+ +...+.++++.+|++.++.++. ..+.+.+
T Consensus 316 Vi~~~~t~~---------lI~--------~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 316 FITCTGNVD---------VIK--------LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp EEECCSSSS---------SBC--------HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred EEECCChhh---------hcC--------HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 999965431 111 2344668999999999887663 4444544
No 201
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.10 E-value=5.5e-06 Score=83.47 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=70.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCE---------EEecCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNL---------FFSTDV 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l---------~~t~d~ 72 (480)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+...+.. . ..+.. .-..++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~-~--~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAA-G--EGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC----------------CHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEecccccc-c--cccchhhhhHHHHhhhHHHH
Confidence 3799999999999999999888 89999999999988877752211111000000 0 00000 002356
Q ss_pred HHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 73 EKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.++++|+||.|+..|... .+.+ +.++..+.++++.+||+.|.
T Consensus 260 ~e~l~~aDIVI~tv~iPg~~-------ap~L-----vt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGRP-------APRL-----VTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHTTCSEEEECCCCTTSC-------CCCC-----BCHHHHHTSCTTCEEEETTG
T ss_pred HHHHhcCCEEEECCCCCCcc-------ccee-----ecHHHHhcCCCCcEEEEEeC
Confidence 67789999999997544221 1211 12456677899999998664
No 202
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.10 E-value=1.1e-05 Score=80.01 Aligned_cols=69 Identities=23% Similarity=0.218 Sum_probs=52.2
Q ss_pred ceEEEECCChhHHHH-HHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 2 VKICCIGAGYVGGPT-MAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~l-A~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|||+|||+|.||..+ +..|.+. +++++ ++|+++++.+.+.+.. +.....+|+++.++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~--~~~~vav~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT--GGEVVSMMSTSAERGAAYATEN-----------------GIGKSVTSVEELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT--TCEEEEEECSCHHHHHHHHHHT-----------------TCSCCBSCHHHHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhhcC--CCeEEEEECCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 699999999999998 7777764 88876 7899999887765421 11123567888775
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 62 ~~D~V~i~tp~~ 73 (332)
T 2glx_A 62 DVDAVYVSTTNE 73 (332)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChh
Confidence 599999998853
No 203
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.09 E-value=7e-06 Score=81.53 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=51.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++.+|+ ++|+++++.+++.+.. +..+.++|+++.+. +
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-~~~~~~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-GNGEVVAVSSRTLESAQAFANKY-----------------HLPKAYDKLEDMLADES 67 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-CSEEEEEEECSCSSTTCC---CC-----------------CCSCEESCHHHHHTCTT
T ss_pred eEEEEEechHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCCC
Confidence 5899999999999999998875 366665 6799987765544321 11135788998887 7
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 68 ~D~V~i~tp~~ 78 (329)
T 3evn_A 68 IDVIYVATINQ 78 (329)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEECCCcH
Confidence 99999999864
No 204
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.07 E-value=1.5e-05 Score=82.98 Aligned_cols=91 Identities=13% Similarity=0.043 Sum_probs=68.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|++||+++.+...... .+.++ .+++++++.||+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~--G~~V~v~d~~~~~~~~a~~-------------------~G~~~-~~l~ell~~aDi 335 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL--GATVWVTEIDPICALQAAM-------------------EGYRV-VTMEYAADKADI 335 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSCHHHHHHHHT-------------------TTCEE-CCHHHHTTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCChHhHHHHHH-------------------cCCEe-CCHHHHHhcCCE
Confidence 4799999999999999999877 9999999999876422221 11233 368888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPV 131 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~ 131 (480)
|++++.|+. -.+ +...+.++++.+|++.+..++
T Consensus 336 Vi~~~~t~~---------lI~--------~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 336 FVTATGNYH---------VIN--------HDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp EEECSSSSC---------SBC--------HHHHHHCCTTEEEEECSSSSC
T ss_pred EEECCCccc---------ccC--------HHHHhhCCCCcEEEEcCCCcc
Confidence 999985531 111 234566899999999887655
No 205
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.07 E-value=1.1e-05 Score=80.00 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=71.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.+|..++..|++..+..+|.+||+++++.+++.+.. .. ..-.+. .+++++++ ++|+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~------------~~-~~~~~~-~~~~~e~v-~aDv 190 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYC------------ED-RGISAS-VQPAEEAS-RCDV 190 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHH------------HH-TTCCEE-ECCHHHHT-SSSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHH------------Hh-cCceEE-ECCHHHHh-CCCE
Confidence 589999999999999999987433578999999999998876410 00 001245 67888888 9999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|+.. +-+. ...+++++.|+..++..|+.
T Consensus 191 Vi~aTp~~~----------pv~~---------~~~l~~G~~V~~ig~~~p~~ 223 (322)
T 1omo_A 191 LVTTTPSRK----------PVVK---------AEWVEEGTHINAIGADGPGK 223 (322)
T ss_dssp EEECCCCSS----------CCBC---------GGGCCTTCEEEECSCCSTTC
T ss_pred EEEeeCCCC----------ceec---------HHHcCCCeEEEECCCCCCCc
Confidence 999988632 1110 14578899999887776664
No 206
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.06 E-value=3.7e-05 Score=75.53 Aligned_cols=117 Identities=22% Similarity=0.304 Sum_probs=72.3
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCC--eEEEEeC--CHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSI--EVAVVDI--SVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~V~~~D~--~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|+| +|.+|.+++..|+.+ ++ ++.++|+ ++++++.... ++..... .....+++.+..+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~--------dl~~~~~--~~~~~~v~~~~~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAA--------DTNHGIA--YDSNTRVRQGGYEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHH--------HHHHHHT--TTCCCEEEECCGGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHH--------HHHHHHh--hCCCcEEEeCCHHHh
Confidence 7999999 999999999999887 54 7999999 8876543221 0111100 012233332235569
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++||+||++.+.|... + ....|+ ..+++..+.+.++. ++.+|++ +|.|.++...
T Consensus 69 ~~aDvVi~~ag~~~~~-g---~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv-~SNPv~~~~~ 127 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQP-G---QTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLT-TSNPVDLLNR 127 (303)
T ss_dssp TTCSEEEECCCCCCCT-T---CCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEE-CCSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-eCChHHHHHH
Confidence 9999999999876432 1 001121 33455555565553 4566655 6888877443
No 207
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.03 E-value=1.4e-05 Score=79.60 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=53.2
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC--Ce-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS--IE-VAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G--~~-V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||+|||+|.||..++..|... ++ ++ |.++|+++++.+++.+.. +.-+..+|+++.++
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~~~~~l~av~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~ 63 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PRSEHQVVAVAARDLSRAKEFAQKH-----------------DIPKAYGSYEELAK 63 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CTTTEEEEEEECSSHHHHHHHHHHH-----------------TCSCEESSHHHHHH
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhc
Confidence 36999999999999999988764 22 35 446899999988776420 11135788888776
Q ss_pred --cCCEEEEEccCC
Q 011650 78 --EANIVFVSVNTP 89 (480)
Q Consensus 78 --~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 64 ~~~vD~V~i~tp~~ 77 (334)
T 3ohs_X 64 DPNVEVAYVGTQHP 77 (334)
T ss_dssp CTTCCEEEECCCGG
T ss_pred CCCCCEEEECCCcH
Confidence 699999998864
No 208
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.03 E-value=1e-05 Score=80.50 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=51.9
Q ss_pred ceEEEECCChhHH-HHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 2 VKICCIGAGYVGG-PTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.+|. .++..|... +++| .++|+++++.+++.+.. +...+.+|+++.++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~--~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA--GAELAGVFESDSDNRAKFTSLF-----------------PSVPFAASAEQLITDA 65 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT--TCEEEEEECSCTTSCHHHHHHS-----------------TTCCBCSCHHHHHTCT
T ss_pred cEEEEECCChHHHHHhhhhhcCC--CcEEEEEeCCCHHHHHHHHHhc-----------------CCCcccCCHHHHhhCC
Confidence 6899999999996 677777654 8886 57899998877665421 12345678888775
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|+||+|+.
T Consensus 66 ~~D~V~i~tp~~ 77 (336)
T 2p2s_A 66 SIDLIACAVIPC 77 (336)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChh
Confidence 689999998864
No 209
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.02 E-value=1.3e-05 Score=79.08 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=69.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
.+|+|||+|.+|..++..|....+..+|++||++ +.+++.+. +-... ...+..+ ++++++++||+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~-----------l~~~~-g~~~~~~-~~~eav~~aDI 186 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILER-----------IGRRC-GVPARMA-APADIAAQADI 186 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHH-----------HHHHH-TSCEEEC-CHHHHHHHCSE
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHH-----------HHHhc-CCeEEEe-CHHHHHhhCCE
Confidence 4799999999999999999875346789999999 44444321 00000 1234566 89999999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||.|+|.+. |-+ . .+.++++++|+..++..|+.
T Consensus 187 Vi~aT~s~~----------pvl-------~--~~~l~~G~~V~~vGs~~p~~ 219 (313)
T 3hdj_A 187 VVTATRSTT----------PLF-------A--GQALRAGAFVGAIGSSLPHT 219 (313)
T ss_dssp EEECCCCSS----------CSS-------C--GGGCCTTCEEEECCCSSTTC
T ss_pred EEEccCCCC----------ccc-------C--HHHcCCCcEEEECCCCCCch
Confidence 999987531 111 1 24688999999888877765
No 210
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.02 E-value=8.3e-06 Score=75.95 Aligned_cols=41 Identities=10% Similarity=0.110 Sum_probs=38.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
|||.|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHH
Confidence 7999999999999999999998 9999999999999988764
No 211
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.99 E-value=5.9e-05 Score=74.30 Aligned_cols=114 Identities=19% Similarity=0.260 Sum_probs=72.5
Q ss_pred ceEEEEC-CChhHHHHHHHHHHc-CCCCeEEEEeCCHHHHH----HHHcCCCCCCCCChHHHHHHhcCCCEEE--ecCHH
Q 011650 2 VKICCIG-AGYVGGPTMAVIALK-CPSIEVAVVDISVPRIN----AWNSDQLPIYEPGLEEVVKQCRGKNLFF--STDVE 73 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~-~~G~~V~~~D~~~~~v~----~l~~g~~~~~e~~l~~~~~~~~~~~l~~--t~d~~ 73 (480)
|||+||| +|++|.++|..|+.+ ....++.++|+++ +.+ .++.. +. .-+++. +++..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~-------------~~~v~~~~~~~~~ 64 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PT-------------AVKIKGFSGEDAT 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CS-------------SEEEEEECSSCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CC-------------CceEEEecCCCcH
Confidence 7999999 899999999999864 2246899999987 222 22221 00 012332 12444
Q ss_pred HHhhcCCEEEEEccCCCCcCCCCCCCCC-----chHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 74 KHVREANIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++++||+||++.+.|..+ |.+ +. +...+++..+.|.++.+ +.++++- |.|..+.-.+
T Consensus 65 ~~~~~aDivii~ag~~rkp---G~~-R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvv-tNPvd~~t~~ 127 (312)
T 3hhp_A 65 PALEGADVVLISAGVARKP---GMD-RSDLFNVNAGIVKNLVQQVAKTCP-KACIGII-TNPVNTTVAI 127 (312)
T ss_dssp HHHTTCSEEEECCSCSCCT---TCC-HHHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC-SSCHHHHHHH
T ss_pred HHhCCCCEEEEeCCCCCCC---CCC-HHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEe-cCcchhHHHH
Confidence 5699999999999887543 111 12 33455666677777764 4555443 6788775544
No 212
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.98 E-value=1.1e-05 Score=72.94 Aligned_cols=72 Identities=10% Similarity=0.150 Sum_probs=50.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHHHhcCCCEEEecCHHHH--hh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIY--EPGLEEVVKQCRGKNLFFSTDVEKH--VR 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a--~~ 77 (480)
++|.|+|+|.||..+|..|.+.. |++|+++|+++++++.+.+...... +..-.+ .+.++ +.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~--------------~l~~~~~~~ 104 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDPD--------------FWERILDTG 104 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCHH--------------HHHTBCSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHH--------------HHHhccCCC
Confidence 47999999999999999998631 6899999999999988875322111 110000 11222 56
Q ss_pred cCCEEEEEccC
Q 011650 78 EANIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|+||+|+|.
T Consensus 105 ~ad~vi~~~~~ 115 (183)
T 3c85_A 105 HVKLVLLAMPH 115 (183)
T ss_dssp CCCEEEECCSS
T ss_pred CCCEEEEeCCC
Confidence 79999999874
No 213
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.97 E-value=3.4e-05 Score=77.57 Aligned_cols=68 Identities=10% Similarity=0.197 Sum_probs=50.5
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++.+.- +...+++|+++.++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-DEYQISKIMTSRTEEVKRDF--------------------PDAEVVHELEEITNDP 64 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESSTHHHHTCT
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCceECCHHHHhcCC
Confidence 58999999999997 56666553 578875 6799987643211 23467789998876
Q ss_pred cCCEEEEEccCCC
Q 011650 78 EANIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|++|+|+..
T Consensus 65 ~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 65 AIELVIVTTPSGL 77 (358)
T ss_dssp TCCEEEECSCTTT
T ss_pred CCCEEEEcCCcHH
Confidence 7899999998754
No 214
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.97 E-value=2.3e-05 Score=77.05 Aligned_cols=87 Identities=16% Similarity=0.322 Sum_probs=54.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+|||+|.||..++..+.+. +++++. ++|+++++.+. .|. + ....+++.+ ..++|
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-~~~elvav~d~~~~~~~~--~g~-~-----------------~~~~~~l~~-~~~~D 67 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-PDFEIAGIVRRNPAEVPF--ELQ-P-----------------FRVVSDIEQ-LESVD 67 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECC---------CCT-T-----------------SCEESSGGG-SSSCC
T ss_pred CEEEEECChHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHH--cCC-C-----------------cCCHHHHHh-CCCCC
Confidence 5899999999999999999874 578887 68999887654 111 1 112345544 37899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+|++|+|+.. ..+.+...++.|.-|++++.
T Consensus 68 vViiatp~~~------------------h~~~~~~al~aG~~Vi~ekP 97 (304)
T 3bio_A 68 VALVCSPSRE------------------VERTALEILKKGICTADSFD 97 (304)
T ss_dssp EEEECSCHHH------------------HHHHHHHHHTTTCEEEECCC
T ss_pred EEEECCCchh------------------hHHHHHHHHHcCCeEEECCC
Confidence 9999987532 12223344566787877654
No 215
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.96 E-value=7.6e-05 Score=74.26 Aligned_cols=106 Identities=13% Similarity=0.179 Sum_probs=72.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.+|..+|..+..- |.+|++||+...... .. .... ..++++.++.||+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~--~~-------------------~~~~-~~~l~ell~~sDi 197 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDL--KE-------------------KGCV-YTSLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHH--HH-------------------TTCE-ECCHHHHHHHCSE
T ss_pred cEEEEECcchHHHHHHHhhccc--CceeeecCCccchhh--hh-------------------cCce-ecCHHHHHhhCCE
Confidence 4799999999999999998876 999999998643211 11 1123 3477888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|.+++|--.... .-.+- .....++++.++|+.|=.+.=..+.+.+.|++.
T Consensus 198 vslh~Plt~~T~-----~li~~--------~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g 247 (334)
T 3kb6_A 198 ISLHVPYTKETH-----HMINE--------ERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTT-----TCBCH--------HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCCCChhhc-----cCcCH--------HHHhhcCCCeEEEecCccccccHHHHHHHHHhC
Confidence 999998532211 12332 234568999999997644433345577777653
No 216
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.95 E-value=4.6e-05 Score=76.30 Aligned_cols=68 Identities=18% Similarity=0.361 Sum_probs=51.2
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc-
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..+.+. ++.+|+ ++|+++++.+ +.. +..++++|+++.+++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-~~~~l~av~d~~~~~~~---~~~-----------------~~~~~~~~~~~ll~~~ 66 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-PGLELAGVSSSDASKVH---ADW-----------------PAIPVVSDPQMLFNDP 66 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHH---TTC-----------------SSCCEESCHHHHHHCS
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCcEEEEEECCCHHHHH---hhC-----------------CCCceECCHHHHhcCC
Confidence 57999999999997 67767654 578876 6899998765 110 234567899998764
Q ss_pred -CCEEEEEccCCC
Q 011650 79 -ANIVFVSVNTPT 90 (480)
Q Consensus 79 -aDvVii~Vptp~ 90 (480)
.|+|++|+|+..
T Consensus 67 ~vD~V~i~tp~~~ 79 (352)
T 3kux_A 67 SIDLIVIPTPNDT 79 (352)
T ss_dssp SCCEEEECSCTTT
T ss_pred CCCEEEEeCChHH
Confidence 899999998654
No 217
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.94 E-value=4.3e-05 Score=79.79 Aligned_cols=90 Identities=17% Similarity=0.118 Sum_probs=67.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|+++|+++.+.+...+. +..+ .+++++++++|+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~-------------------Ga~~-~~l~e~l~~aDv 332 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMME-------------------GFDV-VTVEEAIGDADI 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCEE-ecHHHHHhCCCE
Confidence 4799999999999999999887 89999999999887655431 1222 356777889999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
||+|++++.. .+ ....+.++++.+|++.+..+
T Consensus 333 Vi~atgt~~~---------i~--------~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 333 VVTATGNKDI---------IM--------LEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp EEECSSSSCS---------BC--------HHHHHHSCTTCEEEECSSSG
T ss_pred EEECCCCHHH---------HH--------HHHHHhcCCCcEEEEeCCCC
Confidence 9999876421 11 13445578899998877554
No 218
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.92 E-value=2.7e-05 Score=79.45 Aligned_cols=90 Identities=19% Similarity=0.137 Sum_probs=66.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|+|+|.+|..+|..|... |.+|+++|+++.+....... +... .+++++++.||+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A~~~-------------------G~~~-~sL~eal~~ADV 269 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQAAME-------------------GYQV-LLVEDVVEEAHI 269 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHHHHh-------------------CCee-cCHHHHHhhCCE
Confidence 4799999999999999999987 99999999998765443321 1232 478888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
|+++.++..- .+ ....+.++++.+|++.+-.+
T Consensus 270 Vilt~gt~~i---------I~--------~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 270 FVTTTGNDDI---------IT--------SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp EEECSSCSCS---------BC--------TTTGGGCCTTEEEEECSSSG
T ss_pred EEECCCCcCc---------cC--------HHHHhhcCCCcEEEEeCCCC
Confidence 9987665321 11 12345688999999876443
No 219
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.92 E-value=2.2e-05 Score=79.79 Aligned_cols=70 Identities=7% Similarity=0.146 Sum_probs=54.6
Q ss_pred CceEEEECCC-hhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-
Q 011650 1 MVKICCIGAG-YVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR- 77 (480)
Q Consensus 1 ~mkI~VIGlG-~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
+|||+|||+| .||..++..|.+. ++.+++ ++|+++++.+++.+. -++...+|+++.++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~ell~~ 62 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-PDAQIVAACDPNEDVRERFGKE------------------YGIPVFATLAEMMQH 62 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-TTEEEEEEECSCHHHHHHHHHH------------------HTCCEESSHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHH------------------cCCCeECCHHHHHcC
Confidence 3699999999 9999999988875 467766 689999988776541 02345788888776
Q ss_pred -cCCEEEEEccCC
Q 011650 78 -EANIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 63 ~~vD~V~i~tp~~ 75 (387)
T 3moi_A 63 VQMDAVYIASPHQ 75 (387)
T ss_dssp SCCSEEEECSCGG
T ss_pred CCCCEEEEcCCcH
Confidence 499999998864
No 220
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.92 E-value=1.8e-05 Score=79.84 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=71.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||+|||+|.||.++|..|++. ++|+++|+++++++++.+...... -.+.-..+++++++++|+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~~~~-------------~d~~~~~~l~~ll~~~Dv 80 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATPLK-------------VDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEEEE-------------CCTTCHHHHHHHHTTCSC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCeEE-------------EecCCHHHHHHHHhCCCE
Confidence 5899999999999999999874 799999999999998875311000 000001345666789999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
||.|+|...+ ..+ +...++.++.+++.|+.++.+ +++.+..++.
T Consensus 81 VIn~~P~~~~---------------~~v---~~a~l~~G~~~vD~s~~~~~~-~~l~~~Ak~a 124 (365)
T 2z2v_A 81 VIGALPGFLG---------------FKS---IKAAIKSKVDMVDVSFMPENP-LELRDEAEKA 124 (365)
T ss_dssp EEECCCHHHH---------------HHH---HHHHHHTTCCEEECCCCSSCG-GGGHHHHHHT
T ss_pred EEECCChhhh---------------HHH---HHHHHHhCCeEEEccCCcHHH-HHHHHHHHHc
Confidence 9999774211 112 223345678888888765554 3444444444
No 221
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.91 E-value=5.5e-05 Score=78.31 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=54.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEec----CHHHHh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFST----DVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~----d~~~a~ 76 (480)
+||+|||+|.||...+..|.+. ++.+|+ ++|+++++.+++.+. +.+..-......+ |+++.+
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-~~~~lvav~d~~~~~~~~~a~~------------~~~~g~~~~~~~~~~~~~~~~ll 87 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-DDVEIVAFADPDPYMVGRAQEI------------LKKNGKKPAKVFGNGNDDYKNML 87 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSCHHHHHHHHHH------------HHHTTCCCCEEECSSTTTHHHHT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHH------------HHhcCCCCCceeccCCCCHHHHh
Confidence 5899999999999999888864 577765 789999988876531 0000001134556 888877
Q ss_pred h--cCCEEEEEccCC
Q 011650 77 R--EANIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|+||+|+.
T Consensus 88 ~~~~vD~V~i~tp~~ 102 (444)
T 2ixa_A 88 KDKNIDAVFVSSPWE 102 (444)
T ss_dssp TCTTCCEEEECCCGG
T ss_pred cCCCCCEEEEcCCcH
Confidence 6 589999998864
No 222
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.88 E-value=1.8e-05 Score=76.45 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=72.3
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
||||+|+| +|.||..++..+... +++++.+ +|++..... |. ... ++.. . ..++.+++|+++++.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~~~~~----G~-d~g-----el~g-~-~~gv~v~~dl~~ll~~ 73 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTGSPQL----GQ-DAG-----AFLG-K-QTGVALTDDIERVCAE 73 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTTCTTT----TS-BTT-----TTTT-C-CCSCBCBCCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecCcccc----cc-cHH-----HHhC-C-CCCceecCCHHHHhcC
Confidence 58999999 899999999988875 5888776 688643210 10 000 0000 0 1145668899998899
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||.+++ | ....+.+...++.+.-+|+.||. .+++-.+.+++... ...++++|.+
T Consensus 74 ~DVVIDfT~-p-----------------~a~~~~~~~al~~G~~vVigTTG---~s~~~~~~L~~aa~--~~~vv~a~N~ 130 (272)
T 4f3y_A 74 ADYLIDFTL-P-----------------EGTLVHLDAALRHDVKLVIGTTG---FSEPQKAQLRAAGE--KIALVFSANM 130 (272)
T ss_dssp CSEEEECSC-H-----------------HHHHHHHHHHHHHTCEEEECCCC---CCHHHHHHHHHHTT--TSEEEECSCC
T ss_pred CCEEEEcCC-H-----------------HHHHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHHhc--cCCEEEECCC
Confidence 999999864 2 12222333334446666665543 22322233444331 3456788876
Q ss_pred c
Q 011650 159 L 159 (480)
Q Consensus 159 ~ 159 (480)
.
T Consensus 131 s 131 (272)
T 4f3y_A 131 S 131 (272)
T ss_dssp C
T ss_pred C
Confidence 4
No 223
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.86 E-value=4.7e-05 Score=75.96 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=54.5
Q ss_pred ceEEEECCC-hhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--
Q 011650 2 VKICCIGAG-YVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-- 77 (480)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+| .+|...+..|.+..++.++ .++|+++++.+++.+.. +...+.+|+++.++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 81 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAVFDSYEELLESG 81 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEEESCHHHHHHSS
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCC
Confidence 589999999 8999999888764246776 57899999988766410 12356789998775
Q ss_pred cCCEEEEEccCC
Q 011650 78 EANIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|+||+|+.
T Consensus 82 ~vD~V~i~tp~~ 93 (340)
T 1zh8_A 82 LVDAVDLTLPVE 93 (340)
T ss_dssp CCSEEEECCCGG
T ss_pred CCCEEEEeCCch
Confidence 589999998864
No 224
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.86 E-value=3e-05 Score=76.01 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=69.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+..... .+.....+++.+.+.++|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~-------------~~~~~~~~~~~~~~~~aD 206 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDER-------------RSAYFSLAEAETRLAEYD 206 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSS-------------SCCEECHHHHHHTGGGCS
T ss_pred CEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhc-------------cCceeeHHHHHhhhccCC
Confidence 5799999999999999999988 87 9999999999988876421000 001111124455678999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||.|+|.+...+. ..+.+. ...++++.+|++.++.|..|
T Consensus 207 ivIn~t~~~~~~~~----~~~~i~---------~~~l~~~~~v~D~~y~P~~T 246 (297)
T 2egg_A 207 IIINTTSVGMHPRV----EVQPLS---------LERLRPGVIVSDIIYNPLET 246 (297)
T ss_dssp EEEECSCTTCSSCC----SCCSSC---------CTTCCTTCEEEECCCSSSSC
T ss_pred EEEECCCCCCCCCC----CCCCCC---------HHHcCCCCEEEEcCCCCCCC
Confidence 99999987543200 000000 13467889999998875544
No 225
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.84 E-value=3e-05 Score=78.15 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=52.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||.|+|+|+||..+|..|++ .++|++.|++.++++++++....+.- + +.-..++.+.++++|+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~~-d------------~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLKV-D------------ASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEEC-C------------TTCHHHHHHHHTTCSE
T ss_pred cEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhccCCcEEE-e------------cCCHHHHHHHHhCCCE
Confidence 899999999999999999876 58999999999999988753211100 0 0001123455789999
Q ss_pred EEEEccC
Q 011650 82 VFVSVNT 88 (480)
Q Consensus 82 Vii~Vpt 88 (480)
||.|+|.
T Consensus 81 Vi~~~p~ 87 (365)
T 3abi_A 81 VIGALPG 87 (365)
T ss_dssp EEECCCG
T ss_pred EEEecCC
Confidence 9999984
No 226
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.84 E-value=0.00011 Score=73.95 Aligned_cols=69 Identities=4% Similarity=0.043 Sum_probs=52.0
Q ss_pred ceEEEECCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc-
Q 011650 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||||||+|.+|. .++..+... +.+|+ ++|+++++.+++.+.. +...+.+|+++.+++
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~--~~~lvav~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~~~ 87 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA--GARLAGFHEKDDALAAEFSAVY-----------------ADARRIATAEEILEDE 87 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHHS-----------------SSCCEESCHHHHHTCT
T ss_pred cEEEEECcCHHHHHHHHHHhhcC--CcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 4899999999995 466666654 88855 6899999988776521 223467899987764
Q ss_pred -CCEEEEEccCC
Q 011650 79 -ANIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|+||+|+.
T Consensus 88 ~vD~V~I~tp~~ 99 (361)
T 3u3x_A 88 NIGLIVSAAVSS 99 (361)
T ss_dssp TCCEEEECCCHH
T ss_pred CCCEEEEeCChH
Confidence 89999998864
No 227
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.80 E-value=3.1e-05 Score=79.91 Aligned_cols=73 Identities=10% Similarity=0.165 Sum_probs=53.2
Q ss_pred ceEEEECCChhHH-HHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCC-CCCCCCChHHHHHHhcCCCEEEecCHHHHhh-
Q 011650 2 VKICCIGAGYVGG-PTMAVIALKCPSIEV-AVVDISVPRINAWNSDQ-LPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
+||+|||+|.||. .++..|.+. +++++ .++|+++++.+.+.+.. .+ ...+...+|+++.++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~a~~~g~~--------------~~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVD--------------PRKIYDYSNFDKIAKD 148 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCC--------------GGGEECSSSGGGGGGC
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhCCC--------------cccccccCCHHHHhcC
Confidence 6899999999997 888888764 36775 57899999887765421 00 011345678888776
Q ss_pred -cCCEEEEEccCC
Q 011650 78 -EANIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 149 ~~vD~V~iatp~~ 161 (433)
T 1h6d_A 149 PKIDAVYIILPNS 161 (433)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEEcCCch
Confidence 789999998854
No 228
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.79 E-value=3.1e-05 Score=77.82 Aligned_cols=111 Identities=12% Similarity=0.078 Sum_probs=73.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-cCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-EAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~aD 80 (480)
++|+|+|+|.||..+|..|.+. |++|+++|+++++++++.+.. + .++. +.++.+. +||
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~--GakVvv~D~~~~~l~~~a~~~-----------------g-a~~v-~~~~ll~~~~D 232 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEE-----------------G-ADAV-APNAIYGVTCD 232 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHH-----------------C-CEEC-CGGGTTTCCCS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHc-----------------C-CEEE-ChHHHhccCCc
Confidence 5799999999999999999998 999999999998887665410 1 1222 2233344 899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+++.|.... ..+.. .+ +.+ +..+|.+++..|.+.++..+++++.+ +.+.|..+
T Consensus 233 Ivip~a~~~----------~I~~~----~~----~~l--g~~iV~e~An~p~t~~ea~~~L~~~G------i~~~Pd~~ 285 (364)
T 1leh_A 233 IFAPCALGA----------VLNDF----TI----PQL--KAKVIAGSADNQLKDPRHGKYLHELG------IVYAPDYV 285 (364)
T ss_dssp EEEECSCSC----------CBSTT----HH----HHC--CCSEECCSCSCCBSSHHHHHHHHHHT------CEECCHHH
T ss_pred EeeccchHH----------HhCHH----HH----HhC--CCcEEEeCCCCCcccHHHHHHHHhCC------CEEeccee
Confidence 999885322 12211 12 223 23355567777777656667777764 35677765
No 229
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.79 E-value=7.1e-05 Score=76.84 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=52.0
Q ss_pred ceEEEECCCh---hHHHHHHHHHHcCCCCeEE--EEeCCHHHHHHHHcCC-CCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 2 VKICCIGAGY---VGGPTMAVIALKCPSIEVA--VVDISVPRINAWNSDQ-LPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~La~~~~G~~V~--~~D~~~~~v~~l~~g~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+++.+.. .+ ..++++|+++.
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~----------------~~~~~~~~~~l 100 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD-DHYELVAGALSSTPEKAEASGRELGLD----------------PSRVYSDFKEM 100 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT-SCEEEEEEECCSSHHHHHHHHHHHTCC----------------GGGBCSCHHHH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHcCCC----------------cccccCCHHHH
Confidence 3799999998 999988887765 357776 5799999988766420 00 01346788887
Q ss_pred hhc-------CCEEEEEccCCC
Q 011650 76 VRE-------ANIVFVSVNTPT 90 (480)
Q Consensus 76 ~~~-------aDvVii~Vptp~ 90 (480)
++. .|+|+||+|+..
T Consensus 101 l~~~~~~~~~vD~V~I~tp~~~ 122 (417)
T 3v5n_A 101 AIREAKLKNGIEAVAIVTPNHV 122 (417)
T ss_dssp HHHHHHCTTCCSEEEECSCTTS
T ss_pred HhcccccCCCCcEEEECCCcHH
Confidence 765 899999998754
No 230
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.77 E-value=5.7e-05 Score=75.98 Aligned_cols=67 Identities=13% Similarity=0.171 Sum_probs=49.5
Q ss_pred ceEEEECCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc-
Q 011650 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++ .+. -+.....+|+++.+++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~---~~~-----------------~~~~~~~~~~~~ll~~~ 64 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-PHFELYKIVERSKELS---KER-----------------YPQASIVRSFKELTEDP 64 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-TTEEEEEEECSSCCGG---GTT-----------------CTTSEEESCSHHHHTCT
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHH---HHh-----------------CCCCceECCHHHHhcCC
Confidence 58999999999997 66667664 578876 679987652 211 0235677899998865
Q ss_pred -CCEEEEEccCC
Q 011650 79 -ANIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 65 ~vD~V~i~tp~~ 76 (362)
T 3fhl_A 65 EIDLIVVNTPDN 76 (362)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 89999998864
No 231
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.77 E-value=0.00012 Score=74.84 Aligned_cols=89 Identities=15% Similarity=0.050 Sum_probs=65.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||.|.+|..+|..+... |.+|+++|+++.+...... .++++ .+++++++.||+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf--Ga~Viv~d~dp~~a~~A~~-------------------~G~~v-v~LeElL~~ADI 305 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA--GARVKVTEVDPICALQAAM-------------------DGFEV-VTLDDAASTADI 305 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHH-------------------TTCEE-CCHHHHGGGCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCcchhhHHHh-------------------cCcee-ccHHHHHhhCCE
Confidence 4799999999999999999887 8999999999876433222 12333 367888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
|++|++++- -.+ +.....++++.+|++.+-.
T Consensus 306 Vv~atgt~~---------lI~--------~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 306 VVTTTGNKD---------VIT--------IDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp EEECCSSSS---------SBC--------HHHHHHSCTTEEEEECSSS
T ss_pred EEECCCCcc---------ccC--------HHHHhcCCCCeEEEEcCCC
Confidence 999876531 111 2334568899999987644
No 232
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.76 E-value=4.6e-05 Score=77.68 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=53.2
Q ss_pred ceEEEECCCh---hHHHHHHHHHHcCCCCeEE--EEeCCHHHHHHHHcCC-CCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 2 VKICCIGAGY---VGGPTMAVIALKCPSIEVA--VVDISVPRINAWNSDQ-LPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~La~~~~G~~V~--~~D~~~~~v~~l~~g~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+++.+.. .+ ..++++|+++.
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~----------------~~~~~~~~~~l 75 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD-NTFVLVAGAFDIDPIRGSAFGEQLGVD----------------SERCYADYLSM 75 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG-GSEEEEEEECCSSHHHHHHHHHHTTCC----------------GGGBCSSHHHH
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC-CCeEEEEEEeCCCHHHHHHHHHHhCCC----------------cceeeCCHHHH
Confidence 4899999999 999998888765 357876 4699999988776421 10 01346788887
Q ss_pred hhc-------CCEEEEEccCCC
Q 011650 76 VRE-------ANIVFVSVNTPT 90 (480)
Q Consensus 76 ~~~-------aDvVii~Vptp~ 90 (480)
+++ .|+|+||+|+..
T Consensus 76 l~~~~~~~~~vD~V~i~tp~~~ 97 (398)
T 3dty_A 76 FEQEARRADGIQAVSIATPNGT 97 (398)
T ss_dssp HHHHTTCTTCCSEEEEESCGGG
T ss_pred HhcccccCCCCCEEEECCCcHH
Confidence 754 899999998643
No 233
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.74 E-value=4.9e-05 Score=76.78 Aligned_cols=71 Identities=13% Similarity=0.157 Sum_probs=53.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.||+|||+| +|...+..+++...++++. ++|+++++.+++.+. -++...+|+++.+++.|
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~------------------~gv~~~~~~~~l~~~~D 68 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA------------------FGIPLYTSPEQITGMPD 68 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH------------------TTCCEESSGGGCCSCCS
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH------------------hCCCEECCHHHHhcCCC
Confidence 479999999 6988777776542357776 579999998887652 12445678888888999
Q ss_pred EEEEEccCCCC
Q 011650 81 IVFVSVNTPTK 91 (480)
Q Consensus 81 vVii~Vptp~~ 91 (480)
+++||+|++.+
T Consensus 69 ~v~i~~p~~~h 79 (372)
T 4gmf_A 69 IACIVVRSTVA 79 (372)
T ss_dssp EEEECCC--CT
T ss_pred EEEEECCCccc
Confidence 99999998764
No 234
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.74 E-value=0.0003 Score=73.32 Aligned_cols=78 Identities=18% Similarity=0.212 Sum_probs=52.7
Q ss_pred ceEEEECCChhHHHHH--HHHHHc--C--CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHh-cCCCEEEecCHHH
Q 011650 2 VKICCIGAGYVGGPTM--AVIALK--C--PSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQC-RGKNLFFSTDVEK 74 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA--~~La~~--~--~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~ 74 (480)
|||+|||.|.+|.+.. ..++.. . .+.++.++|+++++.+.... ......... ..-+++.|+|.++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~--------~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYI--------LARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHH--------HHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHH--------HHHHHHHHcCCCeEEEEeCCHHH
Confidence 7999999999987632 223321 1 13579999999998765332 011122221 2235788999999
Q ss_pred HhhcCCEEEEEcc
Q 011650 75 HVREANIVFVSVN 87 (480)
Q Consensus 75 a~~~aDvVii~Vp 87 (480)
|+++||+||+++.
T Consensus 73 Al~gAD~Vi~~~g 85 (477)
T 3u95_A 73 AIEGADFIINTAY 85 (477)
T ss_dssp HHTTCSEEEECCC
T ss_pred HhCCCCEEEECcc
Confidence 9999999999973
No 235
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.72 E-value=8.3e-05 Score=76.08 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=53.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcC-------CCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKC-------PSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVE 73 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-------~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (480)
+||||||+|.||...+..|.+.. .+.+|+ ++|+++++.+++.+.. +..++.+|++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~-----------------~~~~~y~d~~ 89 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL-----------------GAEKAYGDWR 89 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCeEECCHH
Confidence 48999999999999888887530 134555 6799999988876521 2235678999
Q ss_pred HHhh--cCCEEEEEccCCC
Q 011650 74 KHVR--EANIVFVSVNTPT 90 (480)
Q Consensus 74 ~a~~--~aDvVii~Vptp~ 90 (480)
+.++ +.|+|+||+|+..
T Consensus 90 ~ll~~~~vD~V~I~tp~~~ 108 (412)
T 4gqa_A 90 ELVNDPQVDVVDITSPNHL 108 (412)
T ss_dssp HHHHCTTCCEEEECSCGGG
T ss_pred HHhcCCCCCEEEECCCcHH
Confidence 9775 6899999988643
No 236
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.70 E-value=4.5e-05 Score=77.25 Aligned_cols=97 Identities=21% Similarity=0.308 Sum_probs=67.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHHHhcCCCEEE--ecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS-DQLPIYEPGLEEVVKQCRGKNLFF--STDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-g~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~a~~~ 78 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++++.+.+.+ ....+ .... ..++++.+.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~~~---------------~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCGRI---------------HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSS---------------EEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCCee---------------EeccCCHHHHHHHHcC
Confidence 4799999999999999999887 8999999999998877664 21110 0000 1234566789
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+|+||.|++.|... .+.+ ..+...+.++++.+|++.+
T Consensus 232 aDvVi~~~~~p~~~-------t~~l-----i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAK-------APKL-----VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSC-------CCCC-----BCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCC-------Ccce-----ecHHHHhcCCCCcEEEEEe
Confidence 99999999766421 1111 1233456688888888866
No 237
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.68 E-value=0.0002 Score=73.60 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=58.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHc---CC-CCCC-CCChHHHHHHhcCCCEEEecCHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNS---DQ-LPIY-EPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~---g~-~~~~-e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||||||+|.||..++..+.+. ++.+|. ++|+++++.+...+ |. ..+. ..+..++-.....+...+++|+++.
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhC-CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 5899999999999999888764 577755 57999998887643 20 1110 0011111111123567889999998
Q ss_pred hh--cCCEEEEEccCC
Q 011650 76 VR--EANIVFVSVNTP 89 (480)
Q Consensus 76 ~~--~aDvVii~Vptp 89 (480)
++ +.|+|++|+|+|
T Consensus 103 L~d~dIDaVviaTp~p 118 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP 118 (446)
T ss_dssp HTCTTCCEEEECSCCH
T ss_pred hcCCCCCEEEEcCCCh
Confidence 76 589999998754
No 238
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.68 E-value=4.4e-05 Score=75.57 Aligned_cols=65 Identities=18% Similarity=0.469 Sum_probs=48.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+|||+|.||..++..+.+. ++.++ .++|+++++ .+. -++..++|+++.+.++|
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-~~~elvav~d~~~~~--~~~--------------------~gv~~~~d~~~ll~~~D 60 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATL--DTK--------------------TPVFDVADVDKHADDVD 60 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCC--SSS--------------------SCEEEGGGGGGTTTTCS
T ss_pred CEEEEEeecHHHHHHHHHHhcC-CCCEEEEEEcCCHHH--hhc--------------------CCCceeCCHHHHhcCCC
Confidence 6899999999999999988865 46675 478987543 111 02556678777667899
Q ss_pred EEEEEccCC
Q 011650 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+|++|+|+.
T Consensus 61 vViiatp~~ 69 (320)
T 1f06_A 61 VLFLCMGSA 69 (320)
T ss_dssp EEEECSCTT
T ss_pred EEEEcCCcH
Confidence 999998753
No 239
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.67 E-value=0.00022 Score=72.60 Aligned_cols=90 Identities=19% Similarity=0.156 Sum_probs=64.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++.+....... +.. ..+++++++.+|+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~~~-------------------G~~-v~~Leeal~~ADI 278 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQACMD-------------------GFR-LVKLNEVIRQVDI 278 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCE-ECCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHHHc-------------------CCE-eccHHHHHhcCCE
Confidence 4799999999999999999887 89999999998765433221 122 2467888999999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
|++|..++. ..+ .+....++++.+|++.+-.+
T Consensus 279 Vi~atgt~~---------lI~--------~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 279 VITCTGNKN---------VVT--------REHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp EEECSSCSC---------SBC--------HHHHHHSCTTEEEEECSSTT
T ss_pred EEECCCCcc---------cCC--------HHHHHhcCCCcEEEEecCCC
Confidence 999854331 111 12345678899998876443
No 240
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.65 E-value=4.6e-05 Score=73.75 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=66.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+.. .....+++.+++.++|
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------------~~~~~~~~~~~~~~aD 177 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSLNI------------------NKINLSHAESHLDEFD 177 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCSCC------------------EEECHHHHHHTGGGCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhc------------------ccccHhhHHHHhcCCC
Confidence 4799999999999999999998 87 8999999998876655321 1111234555578999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||-|+|.....+. ..+ + -...++++.+|++.++.|..|
T Consensus 178 iVInaTp~Gm~~~~----~~~-l---------~~~~l~~~~~V~D~vY~P~~T 216 (277)
T 3don_A 178 IIINTTPAGMNGNT----DSV-I---------SLNRLASHTLVSDIVYNPYKT 216 (277)
T ss_dssp EEEECCC-----------CCS-S---------CCTTCCSSCEEEESCCSSSSC
T ss_pred EEEECccCCCCCCC----cCC-C---------CHHHcCCCCEEEEecCCCCCC
Confidence 99999875321100 000 0 023567889999998887655
No 241
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.64 E-value=0.00013 Score=71.80 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=51.3
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh--
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-- 76 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-- 76 (480)
|+||+|||+ |.+|...+..+... +.++ .++|+++++. .+.+. -+...+.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDPATNVG-LVDSF-----------------FPEAEFFTEPEAFEAY 62 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESCHHHHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCceeCCHHHHHHH
Confidence 789999999 79999999999886 6665 4689887752 22221 12356677888765
Q ss_pred --------hcCCEEEEEccCCC
Q 011650 77 --------REANIVFVSVNTPT 90 (480)
Q Consensus 77 --------~~aDvVii~Vptp~ 90 (480)
.+.|+|+||+|+..
T Consensus 63 ~~~l~~~~~~vD~V~I~tP~~~ 84 (312)
T 3o9z_A 63 LEDLRDRGEGVDYLSIASPNHL 84 (312)
T ss_dssp HHHHHHTTCCCSEEEECSCGGG
T ss_pred hhhhcccCCCCcEEEECCCchh
Confidence 47899999988643
No 242
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.64 E-value=0.00013 Score=72.00 Aligned_cols=70 Identities=21% Similarity=0.161 Sum_probs=51.0
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh--
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-- 76 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-- 76 (480)
|+||||||+ |++|...+..+... +.+++ ++|+++++. .+.+. -+...+.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDINDSVG-IIDSI-----------------SPQSEFFTEFEFFLDH 62 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESSHHHHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCcEECCHHHHHHh
Confidence 789999999 79999999999886 66654 678887652 22221 02356677887765
Q ss_pred ---------hcCCEEEEEccCCC
Q 011650 77 ---------REANIVFVSVNTPT 90 (480)
Q Consensus 77 ---------~~aDvVii~Vptp~ 90 (480)
.+.|+|+||+|+..
T Consensus 63 ~~~l~~~~~~~vD~V~I~tP~~~ 85 (318)
T 3oa2_A 63 ASNLKRDSATALDYVSICSPNYL 85 (318)
T ss_dssp HHHHTTSTTTSCCEEEECSCGGG
T ss_pred hhhhhhccCCCCcEEEECCCcHH
Confidence 46899999988643
No 243
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.64 E-value=0.00032 Score=69.91 Aligned_cols=115 Identities=23% Similarity=0.311 Sum_probs=74.2
Q ss_pred eEEEECC-ChhHHHHHHHHHHcC-CC----CeEEEEeCCHHH--HH----HHHcCCCCCCCCChHHHHHHhcCCCEEEec
Q 011650 3 KICCIGA-GYVGGPTMAVIALKC-PS----IEVAVVDISVPR--IN----AWNSDQLPIYEPGLEEVVKQCRGKNLFFST 70 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~-~G----~~V~~~D~~~~~--v~----~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
||+|+|+ |.+|.+++..|+... -| .++.++|+++.. ++ .|+..-.+. ......++
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~-------------~~~~~~~~ 92 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL-------------LDKVVVTA 92 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTT-------------EEEEEEES
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccC-------------CCcEEEcC
Confidence 8999996 999999999998751 01 279999998642 22 222211111 12356788
Q ss_pred CHHHHhhcCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHH
Q 011650 71 DVEKHVREANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
+..+++++||+||++-.-|..+ |.+ +.| .+-+++..+.|.++..++.+|+. -|.|..+.-
T Consensus 93 ~~~~a~~~advVvi~aG~prkp---Gmt-R~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~~~ 157 (345)
T 4h7p_A 93 DPRVAFDGVAIAIMCGAFPRKA---GME-RKDLLEMNARIFKEQGEAIAAVAASDCRVVV-VGNPANTNA 157 (345)
T ss_dssp CHHHHTTTCSEEEECCCCCCCT---TCC-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHH
T ss_pred ChHHHhCCCCEEEECCCCCCCC---CCC-HHHHHHHhHHHHHHHHHHHHhhccCceEEEE-eCCCcchHH
Confidence 8888899999999997766543 111 122 34455666677777777776554 356766543
No 244
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.61 E-value=0.00025 Score=70.80 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=47.7
Q ss_pred CceEEEECCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|||+|.||. ..+..+.. .++++|+ ++|++ +.+++.+. ....+....+|+++.+++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~-~~~~~l~av~d~~--~~~~~a~~---------------~~~~~~~~~~~~~~ll~~ 63 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI-RETLEVKTIFDLH--VNEKAAAP---------------FKEKGVNFTADLNELLTD 63 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT-CTTEEEEEEECTT--CCHHHHHH---------------HHTTTCEEESCTHHHHSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhh-CCCeEEEEEECCC--HHHHHHHh---------------hCCCCCeEECCHHHHhcC
Confidence 35999999999998 45555655 3578876 67877 22222210 001235677899998764
Q ss_pred --CCEEEEEccCC
Q 011650 79 --ANIVFVSVNTP 89 (480)
Q Consensus 79 --aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 64 ~~~D~V~i~tp~~ 76 (349)
T 3i23_A 64 PEIELITICTPAH 76 (349)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEEeCCcH
Confidence 89999998864
No 245
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.60 E-value=9.1e-05 Score=70.76 Aligned_cols=67 Identities=16% Similarity=0.312 Sum_probs=54.1
Q ss_pred eEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+|.|||+|.||.+++..|++. |. +|++++|++++.+++.+.. +....+++.+++.++|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~------------------~~~~~~~~~~~~~~aDi 169 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPV------------------KIFSLDQLDEVVKKAKS 169 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSC------------------EEEEGGGHHHHHHTCSE
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHc------------------ccCCHHHHHhhhcCCCE
Confidence 689999999999999999998 87 8999999999988776421 11234566677889999
Q ss_pred EEEEccCC
Q 011650 82 VFVSVNTP 89 (480)
Q Consensus 82 Vii~Vptp 89 (480)
||.|+|..
T Consensus 170 VInatp~g 177 (253)
T 3u62_A 170 LFNTTSVG 177 (253)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99998753
No 246
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.60 E-value=0.00043 Score=68.72 Aligned_cols=115 Identities=16% Similarity=0.298 Sum_probs=73.8
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCC--e-----EEEEeCCH--HHHHH----HHcCCCCCCCCChHHHHHHhcCCCEE
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSI--E-----VAVVDISV--PRINA----WNSDQLPIYEPGLEEVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~-----V~~~D~~~--~~v~~----l~~g~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
|||+|+| +|.+|.++|..|+.. +. + +.++|+++ ++.+. |+....++. ..+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-------------~~~~ 68 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-------------KDVI 68 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-------------EEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-------------CCEE
Confidence 6999999 799999999999876 44 5 99999974 23332 332211210 2356
Q ss_pred EecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 68 FSTDVEKHVREANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
.+++..+++++||+||++-..|... +.+ +.| .+.+++..+.+.++.+++..|++ -|.|..+.-.
T Consensus 69 ~~~~~~~~~~daDvVvitAg~prkp---G~t-R~dll~~N~~i~~~i~~~i~~~~~~~~~viv-vsNPvd~~t~ 137 (333)
T 5mdh_A 69 ATDKEEIAFKDLDVAILVGSMPRRD---GME-RKDLLKANVKIFKCQGAALDKYAKKSVKVIV-VGNPANTNCL 137 (333)
T ss_dssp EESCHHHHTTTCSEEEECCSCCCCT---TCC-TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHHH
T ss_pred EcCCcHHHhCCCCEEEEeCCCCCCC---CCC-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-cCCchHHHHH
Confidence 6777777799999999997655432 111 233 34556666777777665543433 3577766433
No 247
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.58 E-value=0.00018 Score=72.71 Aligned_cols=71 Identities=15% Similarity=0.260 Sum_probs=51.7
Q ss_pred ceEEEEC-CChhHHH-HH----HHHHHcCCCCeE----------EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCC
Q 011650 2 VKICCIG-AGYVGGP-TM----AVIALKCPSIEV----------AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKN 65 (480)
Q Consensus 2 mkI~VIG-lG~~G~~-lA----~~La~~~~G~~V----------~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~ 65 (480)
+||+||| +|.||.. .+ ..+.+. ++..+ .++|+++++.+++.+.. +.
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~-~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~-----------------~~ 68 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GGVRLKNGDRIMPDPILVGRSAEKVEALAKRF-----------------NI 68 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH-TSEECTTSCEEEEEEEEECSSSHHHHHHHHHT-----------------TC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc-CceeecCCcccceeeEEEcCCHHHHHHHHHHh-----------------CC
Confidence 5899999 9999997 66 666655 23333 38999999988876421 11
Q ss_pred EEEecCHHHHhhc--CCEEEEEccCCC
Q 011650 66 LFFSTDVEKHVRE--ANIVFVSVNTPT 90 (480)
Q Consensus 66 l~~t~d~~~a~~~--aDvVii~Vptp~ 90 (480)
..+++|+++.+++ .|+|++|+|+..
T Consensus 69 ~~~~~~~~~ll~~~~iD~V~i~tp~~~ 95 (383)
T 3oqb_A 69 ARWTTDLDAALADKNDTMFFDAATTQA 95 (383)
T ss_dssp CCEESCHHHHHHCSSCCEEEECSCSSS
T ss_pred CcccCCHHHHhcCCCCCEEEECCCchH
Confidence 1357889887764 899999988654
No 248
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.57 E-value=7.2e-05 Score=75.54 Aligned_cols=101 Identities=17% Similarity=0.268 Sum_probs=64.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS-DQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|+|+|.+|..+|..+... |++|+++|+++++.+.+.+ ....+. ....-..++++.+.++|
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~-------------~~~~~~~~l~~~~~~~D 231 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVI-------------TLTATEANIKKSVQHAD 231 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEE-------------EEECCHHHHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEE-------------EecCCHHHHHHHHhCCC
Confidence 5799999999999999999988 8999999999998877654 211100 00000123455678999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+||.|++.+... .+.+ ..+...+.++++.+|++.|..
T Consensus 232 vVi~~~g~~~~~-------~~~l-----i~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 232 LLIGAVLVPGAK-------APKL-----VTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp EEEECCC--------------CC-----SCHHHHTTSCTTCEEEECC--
T ss_pred EEEECCCCCccc-------cchh-----HHHHHHHhhcCCCEEEEEecC
Confidence 999999864210 0100 123445667888888876643
No 249
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.57 E-value=0.00027 Score=73.82 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=55.1
Q ss_pred ceEEEECC----ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+ |.||..++..|.+..++++|+ ++|+++++.+.+.+.. + ....++.+|+++.+
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~------g---------~~~~~~~~d~~ell 104 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL------Q---------LKHATGFDSLESFA 104 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT------T---------CTTCEEESCHHHHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------C---------CCcceeeCCHHHHh
Confidence 58999999 999999999998732477765 7899999888766421 0 01235678899877
Q ss_pred h--cCCEEEEEccCC
Q 011650 77 R--EANIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|+||+|+.
T Consensus 105 ~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 105 QYKDIDMIVVSVKVP 119 (479)
T ss_dssp HCTTCSEEEECSCHH
T ss_pred cCCCCCEEEEcCCcH
Confidence 5 689999998854
No 250
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.56 E-value=4.8e-05 Score=73.53 Aligned_cols=122 Identities=12% Similarity=0.154 Sum_probs=69.0
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|+|+ |.||..++..+... ++++++ ++|+++++.. +..--...++ ....+..++|+++++.++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-~~~elva~~d~~~~~~~----g~d~~~~~g~-------~~~~v~~~~dl~~~l~~~ 73 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLL----GSDAGELAGA-------GKTGVTVQSSLDAVKDDF 73 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTC----SCCTTCSSSS-------SCCSCCEESCSTTTTTSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCchhhh----hhhHHHHcCC-------CcCCceecCCHHHHhcCC
Confidence 79999998 99999999988764 588887 6788653311 1000000000 012345677888777899
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|+||-+++ | ....+.+...+..+.-++..+| |.+.+-.+.+.+... ...++++|.+
T Consensus 74 DvVIDft~-p-----------------~~~~~~~~~a~~~G~~vVigTt---G~~~e~~~~L~~~a~--~~~vv~a~N~ 129 (273)
T 1dih_A 74 DVFIDFTR-P-----------------EGTLNHLAFCRQHGKGMVIGTT---GFDEAGKQAIRDAAA--DIAIVFAANF 129 (273)
T ss_dssp SEEEECSC-H-----------------HHHHHHHHHHHHTTCEEEECCC---CCCHHHHHHHHHHTT--TSCEEECSCC
T ss_pred CEEEEcCC-h-----------------HHHHHHHHHHHhCCCCEEEECC---CCCHHHHHHHHHhcC--CCCEEEEecC
Confidence 99996642 2 1223333344455666776665 333332333333221 2245677754
No 251
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.56 E-value=0.00013 Score=73.46 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=51.7
Q ss_pred eEEEECCChhHHHHHHHHHHcCCC-------CeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHH
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPS-------IEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G-------~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
||||||+|.||...+..+... ++ .+| .++|+++++.+++.+.. +..++.+|+++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~-----------------g~~~~~~d~~~ 69 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKL-----------------GWSTTETDWRT 69 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESCHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHH
Confidence 699999999999888877653 11 244 46799999988776421 22356789998
Q ss_pred Hhh--cCCEEEEEccCCC
Q 011650 75 HVR--EANIVFVSVNTPT 90 (480)
Q Consensus 75 a~~--~aDvVii~Vptp~ 90 (480)
.++ +.|+|+||+|+..
T Consensus 70 ll~~~~iDaV~I~tP~~~ 87 (390)
T 4h3v_A 70 LLERDDVQLVDVCTPGDS 87 (390)
T ss_dssp HTTCTTCSEEEECSCGGG
T ss_pred HhcCCCCCEEEEeCChHH
Confidence 775 5899999988654
No 252
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.54 E-value=0.00023 Score=72.65 Aligned_cols=41 Identities=22% Similarity=0.192 Sum_probs=36.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
.+|+|||+|.+|..++..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 4799999999999999988887 8999999999988776654
No 253
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.54 E-value=8.1e-05 Score=76.28 Aligned_cols=71 Identities=13% Similarity=0.284 Sum_probs=54.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHHHhcCCCEEEecCHHHH-hhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIY--EPGLEEVVKQCRGKNLFFSTDVEKH-VRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a-~~~ 78 (480)
|+|.|+|+|.+|..+|..|.+. |++|+++|.|+++++.+++...++. +..-.+.+ +++ +.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L--------------~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLL--------------ESAGAAK 68 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHH--------------HHTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHH--------------HhcCCCc
Confidence 6799999999999999999998 9999999999999999886433332 22222222 222 578
Q ss_pred CCEEEEEccC
Q 011650 79 ANIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
||+||+|++.
T Consensus 69 A~~viv~~~~ 78 (413)
T 3l9w_A 69 AEVLINAIDD 78 (413)
T ss_dssp CSEEEECCSS
T ss_pred cCEEEECCCC
Confidence 9999999864
No 254
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.54 E-value=0.00019 Score=74.17 Aligned_cols=73 Identities=10% Similarity=0.136 Sum_probs=54.8
Q ss_pred ceEEEECC----ChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGA----GYVGGPTMAVIALKCPSIEV-AVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+ |.||..++..|.+..++++| .++|+++++.+++.+.. + ....++.+|+++.+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~------g---------~~~~~~~~~~~~ll 85 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRL------K---------LSNATAFPTLESFA 85 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT------T---------CTTCEEESSHHHHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------C---------CCcceeeCCHHHHh
Confidence 58999999 99999999998864247776 47899999887766421 0 01235678899877
Q ss_pred h--cCCEEEEEccCC
Q 011650 77 R--EANIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|++|+|+.
T Consensus 86 ~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 86 SSSTIDMIVIAIQVA 100 (438)
T ss_dssp HCSSCSEEEECSCHH
T ss_pred cCCCCCEEEEeCCcH
Confidence 6 689999998853
No 255
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.53 E-value=0.0002 Score=62.47 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=34.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCC-HHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS-VPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~-~~~v~~l~ 43 (480)
++|.|+|+|.+|..++..|.+. |++|+++|++ +++++.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~ 44 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLE 44 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHH
Confidence 4699999999999999999998 9999999998 56555554
No 256
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.50 E-value=0.0017 Score=63.94 Aligned_cols=117 Identities=21% Similarity=0.316 Sum_probs=70.3
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHH----HHcCCCCCCCCChHHHHHHhcCCCEEEecC-HH
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDI--SVPRINA----WNSDQLPIYEPGLEEVVKQCRGKNLFFSTD-VE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~----l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d-~~ 73 (480)
|||+|+|+ |.+|.+++..|+.+....++.++|+ ++++.+. +.... ++.. ....++.++| +.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~----------~~~~i~~~~d~l~ 69 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-AGTR----------SDANIYVESDENL 69 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-TTSC----------CCCEEEEEETTCG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-HhcC----------CCeEEEeCCcchH
Confidence 79999999 9999999999988721247999999 8765543 22110 1000 0113444343 46
Q ss_pred HHhhcCCEEEEEccCCCCcCCCCCCCCCc-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 74 KHVREANIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+++++||+||++...|... + ....| ...+++..+.+.++. +.+|++ +|.|..+.-.
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~-g---~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv-~SNPv~~~t~ 130 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKE-G---MSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV-ITNPVDVMTY 130 (313)
T ss_dssp GGGTTCSEEEECCSCCCCT-T---CCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE-CSSSHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCC-C---CcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE-ecCcHHHHHH
Confidence 6799999999998765432 1 00112 233445555566655 455544 5688877543
No 257
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.49 E-value=0.00026 Score=69.22 Aligned_cols=111 Identities=16% Similarity=0.100 Sum_probs=78.7
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+||+++|+.. ....+++.|.+.|++|.+||......+ .+ ...+.+.++
T Consensus 6 ~kIgfIGLG~----------MG~~mA~~L~~~G~~V~v~dr~~~~~~---~l-------------------~~~G~~~~~ 53 (297)
T 4gbj_A 6 EKIAFLGLGN----------LGTPIAEILLEAGYELVVWNRTASKAE---PL-------------------TKLGATVVE 53 (297)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEC-------C---TT-------------------TTTTCEECS
T ss_pred CcEEEEecHH----------HHHHHHHHHHHCCCeEEEEeCCHHHHH---HH-------------------HHcCCeEeC
Confidence 4899999965 999999999999999999997543321 11 123567889
Q ss_pred ChhhhcccCcEEEEeecCccc-ccccHHHHHhhcCCCCEEEEcCCCCCh------HHHhhcCcEEEEecC
Q 011650 405 DAYEATKDSHGVCILTEWDEF-KNLDYQKIYNNMQKPAFVFDGRNILDV------EKLRKIGFIVYSIGK 467 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~~-~~~~~~~~~~~~~~~~~i~D~~~~~~~------~~~~~~g~~y~~iG~ 467 (480)
|+.++++.+|+|+++..-+.- .+.-...+...+++..+|||+..+.+. +.+.+.|+.|..-+.
T Consensus 54 s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapV 123 (297)
T 4gbj_A 54 NAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPI 123 (297)
T ss_dssp SGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred CHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCc
Confidence 999999999999999887542 222223466667777799999998764 344567999976654
No 258
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.48 E-value=0.001 Score=68.10 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=51.6
Q ss_pred CceEEEECCChhHHHH--HHHHHH--cC-CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 1 MVKICCIGAGYVGGPT--MAVIAL--KC-PSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~l--A~~La~--~~-~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+|.+ .+. +..|+. .. ++.+|.++|+++++++.... +...+... .-+++.++|++++
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~---------~~~~~~~~-~~~v~~t~d~~~a 70 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD---------FVKRLVKD-RFKVLISDTFEGA 70 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH---------HHHHHHTT-SSEEEECSSHHHH
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH---------HHHHHhhC-CeEEEEeCCHHHH
Confidence 589999999996 332 223454 21 26789999999998775321 11100000 1356777898788
Q ss_pred hhcCCEEEEEccCC
Q 011650 76 VREANIVFVSVNTP 89 (480)
Q Consensus 76 ~~~aDvVii~Vptp 89 (480)
+++||+||++...+
T Consensus 71 l~~AD~Viitagvg 84 (417)
T 1up7_A 71 VVDAKYVIFQFRPG 84 (417)
T ss_dssp HTTCSEEEECCCTT
T ss_pred hCCCCEEEEcCCCC
Confidence 99999999998644
No 259
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.46 E-value=0.0015 Score=63.54 Aligned_cols=121 Identities=14% Similarity=0.105 Sum_probs=83.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCC
Q 011650 309 RFVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIH 388 (480)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~ 388 (480)
+.+..+...++..+.+++|+|+|+. .-+..+++.|...|++|.+|||.....+....++
T Consensus 140 ~a~~~~l~~~~~~l~g~~v~IiG~G----------~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g----------- 198 (293)
T 3d4o_A 140 GTIMMAIQHTDFTIHGANVAVLGLG----------RVGMSVARKFAALGAKVKVGARESDLLARIAEMG----------- 198 (293)
T ss_dssp HHHHHHHHHCSSCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----------
T ss_pred HHHHHHHHhcCCCCCCCEEEEEeeC----------HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC-----------
Confidence 3333344444557899999999963 4788999999999999999999764422222221
Q ss_pred CCCCCCCCcCceEE--ecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCC---CCChHHHhhcCcEEE
Q 011650 389 LQPTSPSTINQVIV--ASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRN---ILDVEKLRKIGFIVY 463 (480)
Q Consensus 389 ~~~~~~~~~~~~~~--~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~---~~~~~~~~~~g~~y~ 463 (480)
..+ ..++++.++++|+|+++++...+ +. ...+.|++..+++|.-+ -.+.+..+..|..++
T Consensus 199 -----------~~~~~~~~l~~~l~~aDvVi~~~p~~~i---~~-~~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~~ 263 (293)
T 3d4o_A 199 -----------MEPFHISKAAQELRDVDVCINTIPALVV---TA-NVLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKAL 263 (293)
T ss_dssp -----------SEEEEGGGHHHHTTTCSEEEECCSSCCB---CH-HHHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEEE
T ss_pred -----------CeecChhhHHHHhcCCCEEEECCChHHh---CH-HHHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEEE
Confidence 122 24678889999999999987543 33 34567888789999874 234455566788776
Q ss_pred Ee
Q 011650 464 SI 465 (480)
Q Consensus 464 ~i 465 (480)
.+
T Consensus 264 ~~ 265 (293)
T 3d4o_A 264 LV 265 (293)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 260
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.46 E-value=0.00016 Score=72.88 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=49.4
Q ss_pred eEEEECCChhHHHHHHHHHHc------CCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 3 KICCIGAGYVGGPTMAVIALK------CPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~------~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
||||||+|.||...+..+... .++.+|+ ++|+++++.+++.+.. +.-++.+|+++.
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~el 89 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF-----------------GFEKATADWRAL 89 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH-----------------TCSEEESCHHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh-----------------CCCeecCCHHHH
Confidence 699999999998777665431 1345655 6799999888776420 122567899997
Q ss_pred hh--cCCEEEEEccCCC
Q 011650 76 VR--EANIVFVSVNTPT 90 (480)
Q Consensus 76 ~~--~aDvVii~Vptp~ 90 (480)
++ +.|+|+||+|+..
T Consensus 90 l~~~~iDaV~IatP~~~ 106 (393)
T 4fb5_A 90 IADPEVDVVSVTTPNQF 106 (393)
T ss_dssp HHCTTCCEEEECSCGGG
T ss_pred hcCCCCcEEEECCChHH
Confidence 75 5799999988654
No 261
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.46 E-value=0.00055 Score=68.44 Aligned_cols=105 Identities=11% Similarity=0.146 Sum_probs=80.1
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+||+.....+....+ +
T Consensus 160 ~~l~gktvGIIG~G----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~----------------------g 207 (351)
T 3jtm_A 160 YDLEGKTIGTVGAG----------RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET----------------------G 207 (351)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH----------------------C
T ss_pred ccccCCEEeEEEeC----------HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC----------------------C
Confidence 35789999999984 478899999999999999999876443333332 2
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
+.+.+++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.|.+.+.
T Consensus 208 ~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~ 267 (351)
T 3jtm_A 208 AKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVV 267 (351)
T ss_dssp CEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred CeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHH
Confidence 45567899999999999999986 46666433566788998889999875 66765443
No 262
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.43 E-value=0.00064 Score=62.36 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=51.6
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.| .|.+|..++..|+++ |++|++++|++++.+.+..+ ..+..-++ ++...+++.++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~-~~~~~~D~--------------~d~~~~~~~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTHKD-INILQKDI--------------FDLTLSDLSDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHCSS-SEEEECCG--------------GGCCHHHHTTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhccCC-CeEEeccc--------------cChhhhhhcCCC
Confidence 7999999 599999999999998 99999999999888776521 11111111 111014678999
Q ss_pred EEEEEccCC
Q 011650 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||-|...+
T Consensus 64 ~vi~~ag~~ 72 (221)
T 3ew7_A 64 VVVDAYGIS 72 (221)
T ss_dssp EEEECCCSS
T ss_pred EEEECCcCC
Confidence 999998754
No 263
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.42 E-value=0.00034 Score=70.00 Aligned_cols=101 Identities=13% Similarity=0.166 Sum_probs=76.7
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|.+.|++|.+|||....+. ... .+
T Consensus 156 ~~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~----------------------~g 202 (352)
T 3gg9_A 156 RVLKGQTLGIFGYG----------KIGQLVAGYGRAFGMNVLVWGRENSKER-ARA----------------------DG 202 (352)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSHHHHHH-HHH----------------------TT
T ss_pred ccCCCCEEEEEeEC----------HHHHHHHHHHHhCCCEEEEECCCCCHHH-HHh----------------------cC
Confidence 45789999999984 4788999999999999999999753322 121 23
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+++.+++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.+.+
T Consensus 203 ~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~ 259 (352)
T 3gg9_A 203 FAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEEN 259 (352)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTT
T ss_pred ceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHH
Confidence 56667999999999999999885 44555433566788988889999875 55543
No 264
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.39 E-value=0.0016 Score=59.86 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=51.9
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.|. |.+|..++..|+++ |++|+++++++++.+.+......+..-++ ++...+++.++|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~--------------~d~~~~~~~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEP--------------LVLTEADLDSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCG--------------GGCCHHHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEeccc--------------ccccHhhcccCC
Confidence 79999997 99999999999998 99999999999988776542211111111 010014578999
Q ss_pred EEEEEccC
Q 011650 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 65 ~vi~~ag~ 72 (224)
T 3h2s_A 65 AVVDALSV 72 (224)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999865
No 265
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.39 E-value=0.00033 Score=67.34 Aligned_cols=96 Identities=9% Similarity=0.040 Sum_probs=65.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|||+|.+|.+++..|++. |.+|++++|++++.+++.+- + +... ++++ +.++|+
T Consensus 119 k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~------------------~-~~~~-~~~~-l~~~Di 175 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRL------------------G-CDCF-MEPP-KSAFDL 175 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHH------------------T-CEEE-SSCC-SSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC------------------C-CeEe-cHHH-hccCCE
Confidence 4799999999999999999998 89999999999988877520 0 1111 2222 348999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||-|+|..... ....+.+ .+...++++.+|++.++.| .|
T Consensus 176 VInaTp~Gm~~-----~~~l~~~-------~l~~~l~~~~~v~D~vY~P-~T 214 (269)
T 3phh_A 176 IINATSASLHN-----ELPLNKE-------VLKGYFKEGKLAYDLAYGF-LT 214 (269)
T ss_dssp EEECCTTCCCC-----SCSSCHH-------HHHHHHHHCSEEEESCCSS-CC
T ss_pred EEEcccCCCCC-----CCCCChH-------HHHhhCCCCCEEEEeCCCC-ch
Confidence 99998764322 0011111 1222345688999988877 44
No 266
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.38 E-value=0.00092 Score=68.22 Aligned_cols=70 Identities=17% Similarity=0.302 Sum_probs=52.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..++..+... |. +|+++|+++++.+.+.+.. .......+++.+.+.++|
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~----------------g~~~~~~~~l~~~l~~aD 229 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDL----------------GGEAVRFDELVDHLARSD 229 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHH----------------TCEECCGGGHHHHHHTCS
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc----------------CCceecHHhHHHHhcCCC
Confidence 4799999999999999999988 88 9999999998875554310 000001135566678999
Q ss_pred EEEEEccCC
Q 011650 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||.|+|.+
T Consensus 230 vVi~at~~~ 238 (404)
T 1gpj_A 230 VVVSATAAP 238 (404)
T ss_dssp EEEECCSSS
T ss_pred EEEEccCCC
Confidence 999998754
No 267
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.38 E-value=0.00092 Score=67.07 Aligned_cols=103 Identities=19% Similarity=0.318 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+|||....+.. ... +
T Consensus 172 ~~l~gktvGIIGlG----------~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~----------------------g 218 (365)
T 4hy3_A 172 RLIAGSEIGIVGFG----------DLGKALRRVLSGFRARIRVFDPWLPRSML-EEN----------------------G 218 (365)
T ss_dssp CCSSSSEEEEECCS----------HHHHHHHHHHTTSCCEEEEECSSSCHHHH-HHT----------------------T
T ss_pred cccCCCEEEEecCC----------cccHHHHHhhhhCCCEEEEECCCCCHHHH-hhc----------------------C
Confidence 45789999999984 47899999999999999999998654432 221 2
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
+.+ .++++.++.+|+|+++++- ++-+++--.+..+.|++.+++||+-+ ++|.+.+.
T Consensus 219 ~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~ 277 (365)
T 4hy3_A 219 VEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALM 277 (365)
T ss_dssp CEE-CCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHH
T ss_pred eee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHH
Confidence 333 4899999999999999886 34555433566788998889999975 67765443
No 268
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.38 E-value=0.00049 Score=68.22 Aligned_cols=61 Identities=11% Similarity=0.180 Sum_probs=46.5
Q ss_pred ceEEEECCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc-
Q 011650 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.+|. ..+..+.+. ++.+|+ ++|+++++ .++...+|+++.++.
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-~~~~lvav~d~~~~~-------------------------~g~~~~~~~~~ll~~~ 79 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-ANFKLVATASRHGTV-------------------------EGVNSYTTIEAMLDAE 79 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-TTEEEEEEECSSCCC-------------------------TTSEEESSHHHHHHHC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-CCeEEEEEEeCChhh-------------------------cCCCccCCHHHHHhCC
Confidence 5899999999998 688888775 578865 57887431 124567889887765
Q ss_pred --CCEEEEEccC
Q 011650 79 --ANIVFVSVNT 88 (480)
Q Consensus 79 --aDvVii~Vpt 88 (480)
.|+|++|+|+
T Consensus 80 ~~vD~V~i~tp~ 91 (330)
T 4ew6_A 80 PSIDAVSLCMPP 91 (330)
T ss_dssp TTCCEEEECSCH
T ss_pred CCCCEEEEeCCc
Confidence 8999999875
No 269
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.37 E-value=0.00052 Score=68.35 Aligned_cols=84 Identities=18% Similarity=0.242 Sum_probs=55.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHH-cCCCCCCCC-ChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWN-SDQLPIYEP-GLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~-~g~~~~~e~-~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||||+|+|+||..++..|..+ ++.+|.+ .|++++....+. +...+.+.. ..++++. ...+..+.++++...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~---~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFE---ESGIPVAGTVEDLIK 76 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHH---TTTCCCCCCHHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhc---ccccccccCHhHhhc
Confidence 57999999999999999998865 5677664 577755544333 222333221 2233332 134556677777667
Q ss_pred cCCEEEEEccC
Q 011650 78 EANIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|+||+|+|.
T Consensus 77 ~vDvV~~aTp~ 87 (340)
T 1b7g_O 77 TSDIVVDTTPN 87 (340)
T ss_dssp HCSEEEECCST
T ss_pred CCCEEEECCCC
Confidence 89999999875
No 270
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.36 E-value=0.00037 Score=66.93 Aligned_cols=69 Identities=9% Similarity=0.059 Sum_probs=50.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||.|.|+|++|..++..|.++ |++|+++++++++.+.+......+.. +.+ +|++ +.++|
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~---~d~~--~~~~d 65 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLL------------WPG---EEPS--LDGVT 65 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEE------------SSS---SCCC--CTTCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEE------------ecc---cccc--cCCCC
Confidence 57999999999999999999998 99999999999887766542211110 000 1222 67899
Q ss_pred EEEEEccC
Q 011650 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 66 ~vi~~a~~ 73 (286)
T 3ius_A 66 HLLISTAP 73 (286)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998763
No 271
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.35 E-value=0.00012 Score=72.81 Aligned_cols=83 Identities=11% Similarity=0.171 Sum_probs=53.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHc-CCCCCCC--CC-hHHHHHHhcCCCEEEecCHHHHh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWNS-DQLPIYE--PG-LEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~-g~~~~~e--~~-l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||||+|+|+||..++..|... ++.++.+ .|+++++...+.+ ...+.+- ++ ...+ .. +.+.+..|+++.+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~---~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRF-EK---EGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHH-HH---HTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceec-cC---CceEEcCcHHHhc
Confidence 5999999999999999998875 5677654 6887766665543 1111110 00 1011 11 1244566888877
Q ss_pred hcCCEEEEEccCC
Q 011650 77 REANIVFVSVNTP 89 (480)
Q Consensus 77 ~~aDvVii~Vptp 89 (480)
.++|+|++|+|..
T Consensus 78 ~~vDvV~~aTp~~ 90 (334)
T 2czc_A 78 EKVDIIVDATPGG 90 (334)
T ss_dssp TTCSEEEECCSTT
T ss_pred cCCCEEEECCCcc
Confidence 8999999998753
No 272
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.34 E-value=0.00026 Score=68.57 Aligned_cols=124 Identities=10% Similarity=0.107 Sum_probs=71.3
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++||+|+| +|.||..++..+... ++.++.+ +|++.... .|. +..++.. ....++.+++|+++++.+
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~~~~----~G~------d~gel~G-~~~~gv~v~~dl~~ll~~ 88 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKGSSF----VDK------DASILIG-SDFLGVRITDDPESAFSN 88 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTTCTT----TTS------BGGGGTT-CSCCSCBCBSCHHHHTTS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccc----ccc------chHHhhc-cCcCCceeeCCHHHHhcC
Confidence 36899999 999999999988764 5788665 58864210 010 0000000 001246678899998899
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCcc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|++|-+.+ | ..+...+...++.+.-+|+.||.- +.+.. +.|++.. ....++++|.+
T Consensus 89 aDVvIDFT~-p-----------------~a~~~~~~~~l~~Gv~vViGTTG~--~~e~~-~~L~~aa--~~~~~~~a~N~ 145 (288)
T 3ijp_A 89 TEGILDFSQ-P-----------------QASVLYANYAAQKSLIHIIGTTGF--SKTEE-AQIADFA--KYTTIVKSGNM 145 (288)
T ss_dssp CSEEEECSC-H-----------------HHHHHHHHHHHHHTCEEEECCCCC--CHHHH-HHHHHHH--TTSEEEECSCC
T ss_pred CCEEEEcCC-H-----------------HHHHHHHHHHHHcCCCEEEECCCC--CHHHH-HHHHHHh--CcCCEEEECCC
Confidence 999998753 2 223333444444566676655532 11222 2233322 12466788876
Q ss_pred c
Q 011650 159 L 159 (480)
Q Consensus 159 ~ 159 (480)
.
T Consensus 146 S 146 (288)
T 3ijp_A 146 S 146 (288)
T ss_dssp C
T ss_pred c
Confidence 4
No 273
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.34 E-value=0.00087 Score=66.80 Aligned_cols=103 Identities=12% Similarity=0.110 Sum_probs=78.9
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+|||.....+... +
T Consensus 169 ~~l~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~------------------------g 214 (345)
T 4g2n_A 169 MGLTGRRLGIFGMG----------RIGRAIATRARGFGLAIHYHNRTRLSHALEE------------------------G 214 (345)
T ss_dssp CCCTTCEEEEESCS----------HHHHHHHHHHHTTTCEEEEECSSCCCHHHHT------------------------T
T ss_pred cccCCCEEEEEEeC----------hhHHHHHHHHHHCCCEEEEECCCCcchhhhc------------------------C
Confidence 46789999999973 4789999999999999999999864432211 2
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.++.+++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.|.+.+.
T Consensus 215 ~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~ 274 (345)
T 4g2n_A 215 AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALI 274 (345)
T ss_dssp CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHH
Confidence 45667899999999999999986 44455433566788988889999865 67765444
No 274
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.33 E-value=0.0052 Score=58.34 Aligned_cols=113 Identities=19% Similarity=0.178 Sum_probs=76.3
Q ss_pred CCEEEecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHh
Q 011650 64 KNLFFSTDVEKHVREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMH 143 (480)
Q Consensus 64 ~~l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
-++++++|-.+|++++|++|+-+|-. . .-..+++.|.++++.|.+|....|+|+-. +...++.
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPfG--~------------~t~~Iakkii~~lpEgAII~nTCTipp~~---ly~~le~ 189 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPKG--N------------KQPDIIKKFADAIPEGAIVTHACTIPTTK---FAKIFKD 189 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTTC--T------------THHHHHHHHGGGSCTTCEEEECSSSCHHH---HHHHHHH
T ss_pred cCcEeecchHHHhcCCCEEEEecCCC--C------------CcHHHHHHHHhhCcCCCEEecccCCCHHH---HHHHHHH
Confidence 45788888888999999999997632 1 12567899999999999999988998654 4445554
Q ss_pred hcCCCceEE-eeCCcccccCccccccCCCCeEEEEccCCcchHHHHHHHHHHHhccCCCCeEE
Q 011650 144 NSRGINFQI-LSNPEFLAEGTAINDLFKPDRVLIGGRETPEGMKAIKALKDVYAHWVPEDRIL 205 (480)
Q Consensus 144 ~~~g~~~~v-~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~ 205 (480)
..+ .|+.+ .|+|- ..||.. .+..+|.. ..+++..+++.+|-+...+ ..+.
T Consensus 190 l~R-~DvgIsS~HPa-aVPgt~-------Gq~~~g~~--yAtEEqIeklveLaksa~k-~ay~ 240 (358)
T 2b0j_A 190 LGR-EDLNITSYHPG-CVPEMK-------GQVYIAEG--YASEEAVNKLYEIGKIARG-KAFK 240 (358)
T ss_dssp TTC-TTSEEEECBCS-SCTTTC-------CCEEEEES--SSCHHHHHHHHHHHHHHHS-CEEE
T ss_pred hCc-ccCCeeccCCC-CCCCCC-------Cccccccc--cCCHHHHHHHHHHHHHhCC-CeEe
Confidence 332 34443 36774 334442 12344532 3368899999999887653 4443
No 275
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.31 E-value=0.00072 Score=67.04 Aligned_cols=103 Identities=12% Similarity=0.155 Sum_probs=76.8
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||.....+....+ +
T Consensus 141 ~~l~g~tvGIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~----------------------g 188 (330)
T 4e5n_A 141 TGLDNATVGFLGMG----------AIGLAMADRLQGWGATLQYHEAKALDTQTEQRL----------------------G 188 (330)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH----------------------T
T ss_pred CccCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc----------------------C
Confidence 35689999999973 478899999999999999999987333333332 2
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
+.+. ++++.++.+|+|+++++. ++.+++--.+....|++.+++||+-+ +.|.+.+
T Consensus 189 ~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL 246 (330)
T 4e5n_A 189 LRQV-ACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAV 246 (330)
T ss_dssp EEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred ceeC-CHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHH
Confidence 3443 789999999999999986 34555433567788988889999865 5665443
No 276
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.28 E-value=0.00024 Score=61.44 Aligned_cols=99 Identities=9% Similarity=-0.014 Sum_probs=63.4
Q ss_pred ceEEEECC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.+|..++.+|.+. ||+ +|++|+.+... .+ .++.+..++++.-.
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~--G~~--v~~vnp~~~~~------~i--------------~G~~~~~sl~el~~ 69 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ--GYR--VLPVNPRFQGE------EL--------------FGEEAVASLLDLKE 69 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT--TCE--EEEECGGGTTS------EE--------------TTEECBSSGGGCCS
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC--CCE--EEEeCCCcccC------cC--------------CCEEecCCHHHCCC
Confidence 47999999 89999999999998 997 56677653110 00 23566677777556
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
..|++++|+|.. .+.++++++.+.-. ..+++..++. .+++.+..++.
T Consensus 70 ~vDlavi~vp~~---------------~~~~v~~~~~~~gi-~~i~~~~g~~----~~~~~~~a~~~ 116 (140)
T 1iuk_A 70 PVDILDVFRPPS---------------ALMDHLPEVLALRP-GLVWLQSGIR----HPEFEKALKEA 116 (140)
T ss_dssp CCSEEEECSCHH---------------HHTTTHHHHHHHCC-SCEEECTTCC----CHHHHHHHHHT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEEEcCCcC----HHHHHHHHHHc
Confidence 799999999842 23344555544332 3455543332 35566666554
No 277
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.27 E-value=0.0013 Score=65.65 Aligned_cols=105 Identities=12% Similarity=0.173 Sum_probs=78.2
Q ss_pred cCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHH-hCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLM-GDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~-~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+..+.+++|+|+|+.. -...+++.|. ..|.+|.+|||.....+....+
T Consensus 158 ~~~l~g~~vgIIG~G~----------IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~--------------------- 206 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGA----------IQKEIARKAVHGLGMKLVYYDVAPADAETEKAL--------------------- 206 (348)
T ss_dssp CCCSTTCEEEEECCSH----------HHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH---------------------
T ss_pred CcCCCCCEEEEEEECH----------HHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc---------------------
Confidence 3467899999999854 8899999999 9999999999976543322222
Q ss_pred CceEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCC--CChHHH
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNI--LDVEKL 455 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~--~~~~~~ 455 (480)
++.+..++++.++.+|+|+++++.. +.+++--.++...|++..+|+|+-+. .+.+.+
T Consensus 207 -g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL 266 (348)
T 2w2k_A 207 -GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDAL 266 (348)
T ss_dssp -TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred -CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHH
Confidence 2445567889999999999999874 45654334566788877799998774 565444
No 278
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.26 E-value=0.00015 Score=72.16 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=51.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHc-CCCCCCC--CChHHHHHHhcCCCEEEecCHHHHh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVPRINAWNS-DQLPIYE--PGLEEVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~-g~~~~~e--~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|+||||+|+|++|..++..|.++ +++++.+ .|+++.....+.. .....+. ++.-.... ...+.+..++++.+
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~---~~~l~v~~~~~~~~ 76 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFE---KAGIEVAGTVDDML 76 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHH---HTTCCCCEEHHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeec---CCceEEcCCHHHHh
Confidence 68999999999999999999875 4677765 5776554443332 1111111 11000011 12344445667767
Q ss_pred hcCCEEEEEccC
Q 011650 77 REANIVFVSVNT 88 (480)
Q Consensus 77 ~~aDvVii~Vpt 88 (480)
.++|+||.|+|.
T Consensus 77 ~~vDvV~~atp~ 88 (337)
T 1cf2_P 77 DEADIVIDCTPE 88 (337)
T ss_dssp HTCSEEEECCST
T ss_pred cCCCEEEECCCc
Confidence 899999999874
No 279
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.26 E-value=0.0013 Score=66.59 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=66.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHH------HHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVP------RINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~------~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||+|||.|.-|.+-|.+|.+. |.+|++=-+... ..++..+ .++++. +++++
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDS--Gv~V~Vglr~~s~~e~~~S~~~A~~-------------------~Gf~v~-~~~eA 95 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDS--GLDISYALRKEAIAEKRASWRKATE-------------------NGFKVG-TYEEL 95 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT--TCEEEEEECHHHHHTTCHHHHHHHH-------------------TTCEEE-EHHHH
T ss_pred CEEEEeCCChHhHHHHhHHHhc--CCcEEEEeCCCCcccccchHHHHHH-------------------CCCEec-CHHHH
Confidence 5899999999999999999998 999986655221 1111111 245554 57888
Q ss_pred hhcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 76 VREANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.||+|++-+|...+ ..+.+.|.+++++|+.+.....
T Consensus 96 ~~~ADvV~~L~PD~~q---------------~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 96 IPQADLVINLTPDKQH---------------SDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp GGGCSEEEECSCGGGH---------------HHHHHHHGGGSCTTCEEEESSC
T ss_pred HHhCCEEEEeCChhhH---------------HHHHHHHHhhCCCCCEEEecCc
Confidence 9999999999874321 3456789999999999887543
No 280
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.24 E-value=0.0004 Score=64.14 Aligned_cols=73 Identities=21% Similarity=0.312 Sum_probs=50.3
Q ss_pred Cce-EEEEC-CChhHHHHHHHHH-HcCCCCeEEEEeCCHH-HHHHHHc-C-CCCCCCCChHHHHHHhcCCCEEEecCHHH
Q 011650 1 MVK-ICCIG-AGYVGGPTMAVIA-LKCPSIEVAVVDISVP-RINAWNS-D-QLPIYEPGLEEVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mk-I~VIG-lG~~G~~lA~~La-~~~~G~~V~~~D~~~~-~v~~l~~-g-~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
||| |.|.| .|.+|..++..|+ +. |++|++++++++ +.+.+.. + ...... ..+.-..++++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------------~D~~d~~~~~~ 69 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVIE------------GSFQNPGXLEQ 69 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEEE------------CCTTCHHHHHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEEE------------CCCCCHHHHHH
Confidence 566 99999 5999999999999 77 999999999998 7766631 1 100000 00100123345
Q ss_pred HhhcCCEEEEEcc
Q 011650 75 HVREANIVFVSVN 87 (480)
Q Consensus 75 a~~~aDvVii~Vp 87 (480)
+++++|+||.+..
T Consensus 70 ~~~~~d~vv~~ag 82 (221)
T 3r6d_A 70 AVTNAEVVFVGAM 82 (221)
T ss_dssp HHTTCSEEEESCC
T ss_pred HHcCCCEEEEcCC
Confidence 6788999999975
No 281
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.24 E-value=0.00085 Score=67.32 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=82.4
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+..+|+|+|+.. ....++..|.+.|.+|.+||......+ .+. ..++..
T Consensus 21 ~~mkIgiIGlG~----------mG~~~A~~L~~~G~~V~v~dr~~~~~~---~l~-------------------~~g~~~ 68 (358)
T 4e21_A 21 QSMQIGMIGLGR----------MGADMVRRLRKGGHECVVYDLNVNAVQ---ALE-------------------REGIAG 68 (358)
T ss_dssp -CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHH---HHH-------------------TTTCBC
T ss_pred cCCEEEEECchH----------HHHHHHHHHHhCCCEEEEEeCCHHHHH---HHH-------------------HCCCEE
Confidence 457999999865 899999999999999999998543322 121 123456
Q ss_pred ecChhhhcccC---cEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCCh------HHHhhcCcEEEEecC
Q 011650 403 ASDAYEATKDS---HGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDV------EKLRKIGFIVYSIGK 467 (480)
Q Consensus 403 ~~~~~~a~~~~---d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~------~~~~~~g~~y~~iG~ 467 (480)
+.++.++++++ |+|+++++.+..++ -++.+...+++..+|+|+.+.... +.+.+.|+.|...+.
T Consensus 69 ~~s~~e~~~~a~~~DvVi~~vp~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 69 ARSIEEFCAKLVKPRVVWLMVPAAVVDS-MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp CSSHHHHHHHSCSSCEEEECSCGGGHHH-HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred eCCHHHHHhcCCCCCEEEEeCCHHHHHH-HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCC
Confidence 67899999998 99999999884443 235666777777799999998843 234456898887654
No 282
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.23 E-value=0.0093 Score=58.06 Aligned_cols=114 Identities=14% Similarity=0.132 Sum_probs=79.2
Q ss_pred hcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 318 ~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
.+..+.+++|+|+|+. .-+..+++.|...|++|.+|||.....+....++
T Consensus 151 ~~~~l~g~~v~IiG~G----------~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-------------------- 200 (300)
T 2rir_A 151 TDYTIHGSQVAVLGLG----------RTGMTIARTFAALGANVKVGARSSAHLARITEMG-------------------- 200 (300)
T ss_dssp CSSCSTTSEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------------------
T ss_pred cCCCCCCCEEEEEccc----------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--------------------
Confidence 3457899999999963 4788999999999999999999764322111221
Q ss_pred CceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC---CChHHHhhcCcEEEEe
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI---LDVEKLRKIGFIVYSI 465 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~~g~~y~~i 465 (480)
-......++++.++++|+|+++++... ++ +...+.|++..+++|.-+- .+-+..+..|..++.+
T Consensus 201 ~~~~~~~~l~~~l~~aDvVi~~~p~~~---i~-~~~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~ 267 (300)
T 2rir_A 201 LVPFHTDELKEHVKDIDICINTIPSMI---LN-QTVLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLA 267 (300)
T ss_dssp CEEEEGGGHHHHSTTCSEEEECCSSCC---BC-HHHHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEEC
T ss_pred CeEEchhhHHHHhhCCCEEEECCChhh---hC-HHHHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEEC
Confidence 001112578888999999999999754 33 2355778887899998652 1224455678877654
No 283
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.23 E-value=0.00095 Score=67.63 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=35.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
.+|+|+|+|.+|...+..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4799999999999999988887 8899999999887766654
No 284
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.22 E-value=0.0007 Score=58.73 Aligned_cols=97 Identities=10% Similarity=-0.048 Sum_probs=62.2
Q ss_pred ceEEEECC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.+|..++..|.+. |++| |++|+.. +.+ .++.+..++++...
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~--G~~v--~~Vnp~~-~~i---------------------~G~~~y~sl~~l~~ 76 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH--GYDV--YPVNPKY-EEV---------------------LGRKCYPSVLDIPD 76 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEE--EEECTTC-SEE---------------------TTEECBSSGGGCSS
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC--CCEE--EEECCCC-CeE---------------------CCeeccCCHHHcCC
Confidence 47999999 79999999999988 9984 5555542 100 23566677777556
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhh
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
.+|++++|+|.+ .+.++++++.+.-. ..++ +.++.. .+++.+..++.
T Consensus 77 ~vDlvvi~vp~~---------------~~~~vv~~~~~~gi-~~i~-~~~g~~---~~~l~~~a~~~ 123 (144)
T 2d59_A 77 KIEVVDLFVKPK---------------LTMEYVEQAIKKGA-KVVW-FQYNTY---NREASKKADEA 123 (144)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHTC-SEEE-ECTTCC---CHHHHHHHHHT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEE-ECCCch---HHHHHHHHHHc
Confidence 799999999842 24555655554322 3444 333222 45566666554
No 285
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.21 E-value=0.00099 Score=64.77 Aligned_cols=108 Identities=14% Similarity=0.167 Sum_probs=80.2
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|.+.|.+|.+|||.....+ ..
T Consensus 119 ~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~---------------------------~~ 161 (290)
T 3gvx_A 119 LLYGKALGILGYG----------GIGRRVAHLAKAFGMRVIAYTRSSVDQN---------------------------VD 161 (290)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSSCCCTT---------------------------CS
T ss_pred eeecchheeeccC----------chhHHHHHHHHhhCcEEEEEeccccccc---------------------------cc
Confidence 4678999999984 5788999999999999999999754321 12
Q ss_pred EEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh----hcCcEEEEe
Q 011650 401 IVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR----KIGFIVYSI 465 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~----~~g~~y~~i 465 (480)
...+++++.++.+|+|+++++. ++.+++--.+..+.|++..++||+-+ +.+.+.+. +-++...++
T Consensus 162 ~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~l 233 (290)
T 3gvx_A 162 VISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLS 233 (290)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEE
T ss_pred cccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEee
Confidence 3556899999999999999996 55555444567788998889999865 55654333 334544444
No 286
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.17 E-value=0.0013 Score=63.68 Aligned_cols=108 Identities=8% Similarity=0.066 Sum_probs=77.5
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....+++.|.+.|.+|.+||+.....+.... .++...+
T Consensus 2 ~~i~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~~ 49 (287)
T 3pef_A 2 QKFGFIGLGI----------MGSAMAKNLVKAGCSVTIWNRSPEKAEELAA----------------------LGAERAA 49 (287)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----------------------TTCEECS
T ss_pred CEEEEEeecH----------HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----------------------CCCeecC
Confidence 4899999865 8899999999999999999986544222221 2456778
Q ss_pred ChhhhcccCcEEEEeecCc-ccccccH--HHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011650 405 DAYEATKDSHGVCILTEWD-EFKNLDY--QKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~-~~~~~~~--~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+ ..++.-. +.+...+++..+|+|..+..... .+.+.|..|..
T Consensus 50 ~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 50 TPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 9999999999999999965 3333211 44556676777999998766432 23355777754
No 287
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.17 E-value=0.00039 Score=68.40 Aligned_cols=70 Identities=21% Similarity=0.263 Sum_probs=46.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeE-EEEeCCHHH-HHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh---
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVPR-INAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV--- 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~-v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~--- 76 (480)
+||+|||+|++|..++..+.++.++.++ .++|+++++ ...+.+.. +....+++.++.+
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-----------------g~~~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-----------------GVTTTYAGVEGLIKLP 67 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-----------------TCCEESSHHHHHHHSG
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-----------------CCCcccCCHHHHHhcc
Confidence 5899999999999999998663356665 467998766 34433210 1112234555543
Q ss_pred --hcCCEEEEEccC
Q 011650 77 --REANIVFVSVNT 88 (480)
Q Consensus 77 --~~aDvVii~Vpt 88 (480)
.++|+||+|+|+
T Consensus 68 ~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 68 EFADIDFVFDATSA 81 (312)
T ss_dssp GGGGEEEEEECSCH
T ss_pred CCCCCcEEEECCCh
Confidence 458999999874
No 288
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.17 E-value=0.0021 Score=62.62 Aligned_cols=108 Identities=9% Similarity=0.100 Sum_probs=79.3
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.+ -...++..|.+.|.+|.+||+.-...+.... .+++..
T Consensus 15 ~~~I~vIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~ 62 (296)
T 3qha_A 15 QLKLGYIGLGN----------MGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----------------------AGATLA 62 (296)
T ss_dssp CCCEEEECCST----------THHHHHHHHTTSTTCEEEECSSTTTSHHHHH----------------------TTCEEC
T ss_pred CCeEEEECcCH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------------------CCCEEc
Confidence 35899999865 8999999999999999999986554322221 245677
Q ss_pred cChhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011650 404 SDAYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSI 465 (480)
Q Consensus 404 ~~~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
+++.++++ +|+|+++++.+. .++ -++.+...+++..+|+|........ .+.+.|+.|..-
T Consensus 63 ~~~~~~~~-aDvvi~~vp~~~~~~~-v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~ 129 (296)
T 3qha_A 63 DSVADVAA-ADLIHITVLDDAQVRE-VVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDA 129 (296)
T ss_dssp SSHHHHTT-SSEEEECCSSHHHHHH-HHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEEC
T ss_pred CCHHHHHh-CCEEEEECCChHHHHH-HHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 89999999 999999999763 332 2356777777777999998876432 233457777643
No 289
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.16 E-value=0.0026 Score=62.82 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=52.4
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCC-------eEEEEeCCH--HHHH----HHHcCCCCCCCCChHHHHHHhcCCCEE
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSI-------EVAVVDISV--PRIN----AWNSDQLPIYEPGLEEVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~-------~V~~~D~~~--~~v~----~l~~g~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
|||.|+|. |++|.+++..|+.+ |+ +|+++|+++ ++.+ .+.....++ . +.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~------------~-~di~ 69 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL------------L-AGLE 69 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT------------E-EEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc------------c-CCeE
Confidence 79999996 99999999999987 75 899999974 2222 222111111 0 2356
Q ss_pred EecCHHHHhhcCCEEEEEccCC
Q 011650 68 FSTDVEKHVREANIVFVSVNTP 89 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp 89 (480)
.+++..++++++|+||.+...+
T Consensus 70 ~~~~~~~a~~~~D~Vih~Ag~~ 91 (327)
T 1y7t_A 70 ATDDPKVAFKDADYALLVGAAP 91 (327)
T ss_dssp EESCHHHHTTTCSEEEECCCCC
T ss_pred eccChHHHhCCCCEEEECCCcC
Confidence 6677788899999999997654
No 290
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.16 E-value=0.0013 Score=65.61 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=76.7
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|.+.|++|.+|||....+. ...+ ++
T Consensus 165 ~l~g~tvGIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g~ 211 (347)
T 1mx3_A 165 RIRGETLGIIGLG----------RVGQAVALRAKAFGFNVLFYDPYLSDGV-ERAL----------------------GL 211 (347)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHH----------------------TC
T ss_pred CCCCCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEECCCcchhh-Hhhc----------------------CC
Confidence 5789999999974 4788999999999999999999865432 2222 23
Q ss_pred EEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 401 IVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
.+..++++.++.+|+|+++++.. +.+++--++....|++..++||+-+ +.+.+.+
T Consensus 212 ~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL 269 (347)
T 1mx3_A 212 QRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKAL 269 (347)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHH
T ss_pred eecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHH
Confidence 45568899999999999999873 5555433556678988889999866 4565433
No 291
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.15 E-value=0.0018 Score=65.54 Aligned_cols=104 Identities=10% Similarity=0.131 Sum_probs=78.3
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+|||.....+....+ +
T Consensus 187 ~~l~gktvGIIGlG----------~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~----------------------G 234 (393)
T 2nac_A 187 YDLEAMHVGTVAAG----------RIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL----------------------N 234 (393)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH----------------------T
T ss_pred ccCCCCEEEEEeEC----------HHHHHHHHHHHhCCCEEEEEcCCccchhhHhhc----------------------C
Confidence 46789999999984 578899999999999999999986544333333 2
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
+.+..++++.++.+|+|+++++. ++.+++--+.....|++.+++||+-+ +.+.+.+
T Consensus 235 ~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL 293 (393)
T 2nac_A 235 LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAV 293 (393)
T ss_dssp CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHH
Confidence 34456789999999999999986 35555433566788988889999866 5565433
No 292
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.14 E-value=0.0031 Score=62.32 Aligned_cols=115 Identities=14% Similarity=0.076 Sum_probs=69.7
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISV--PRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV- 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~--~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~- 76 (480)
||||.|||+|.+|.+ +|..|.++ |++|+++|.++ ...+.|.+...+ +..-.+++...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~~~gi~-----------------v~~g~~~~~l~~ 64 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLEALGID-----------------VYEGFDAAQLDE 64 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHTTCE-----------------EEESCCGGGGGS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHHhCCCE-----------------EECCCCHHHcCC
Confidence 689999999999996 88888888 99999999864 234445432111 22223444422
Q ss_pred hcCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHH----------HHHhhC-CCCcEEEEecCCCcccHHH-HHHHHHhh
Q 011650 77 REANIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----------MIADVS-KSDKIVVEKSTVPVKTAEA-IEKILMHN 144 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~----------~i~~~l-~~~~iVi~~STv~~gt~~~-l~~~l~~~ 144 (480)
.++|+||++-.-|.+ .|. +..+.+ -+...+ +...+|-+..|..-.||.. +..+|++.
T Consensus 65 ~~~d~vV~Spgi~~~--------~p~---~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 65 FKADVYVIGNVAKRG--------MDV---VEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp CCCSEEEECTTCCTT--------CHH---HHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCcCCC--------CHH---HHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 479999887433321 232 233222 123322 3346777777776666655 56777765
Q ss_pred c
Q 011650 145 S 145 (480)
Q Consensus 145 ~ 145 (480)
+
T Consensus 134 g 134 (326)
T 3eag_A 134 G 134 (326)
T ss_dssp T
T ss_pred C
Confidence 4
No 293
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.14 E-value=0.00023 Score=65.94 Aligned_cols=73 Identities=23% Similarity=0.304 Sum_probs=49.8
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||.|.| .|.+|..++..|+++ |++|+++++++++.+.+..+ ..+.. +.+.-..++.++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~-~~~~~------------~Dl~d~~~~~~~~~~~ 68 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIENEH-LKVKK------------ADVSSLDEVCEVCKGA 68 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCCTT-EEEEC------------CCTTCHHHHHHHHTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhccCc-eEEEE------------ecCCCHHHHHHHhcCC
Confidence 57999999 599999999999998 99999999997754322111 00000 1111112344567889
Q ss_pred CEEEEEccC
Q 011650 80 NIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-|...
T Consensus 69 d~vi~~a~~ 77 (227)
T 3dhn_A 69 DAVISAFNP 77 (227)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeCcC
Confidence 999999754
No 294
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.14 E-value=0.0012 Score=68.39 Aligned_cols=75 Identities=15% Similarity=0.216 Sum_probs=51.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|.|+|+|.+|..++..|++. |++|+++|+++++.+.+.+....+.. ....+.-..++.++++++|+
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~~----------~~~Dv~d~~~l~~~l~~~Dv 71 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTP----------ISLDVNDDAALDAEVAKHDL 71 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEEE----------EECCTTCHHHHHHHHTTSSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCceE----------EEeecCCHHHHHHHHcCCcE
Confidence 5799999999999999999987 89999999999988877642100000 00000000133455678999
Q ss_pred EEEEccC
Q 011650 82 VFVSVNT 88 (480)
Q Consensus 82 Vii~Vpt 88 (480)
||.|+|.
T Consensus 72 VIn~a~~ 78 (450)
T 1ff9_A 72 VISLIPY 78 (450)
T ss_dssp EEECCC-
T ss_pred EEECCcc
Confidence 9999874
No 295
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.14 E-value=0.0019 Score=63.99 Aligned_cols=103 Identities=12% Similarity=0.176 Sum_probs=74.9
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.. -...+++.|...|.+|.+||+.....+....+ +
T Consensus 151 ~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----------------------g 198 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGR----------IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF----------------------Q 198 (330)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT----------------------T
T ss_pred cCCCCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEECCCCcchhHHHhc----------------------C
Confidence 356789999999854 88999999999999999999876432222211 2
Q ss_pred eEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCC--CChHHH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNI--LDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~--~~~~~~ 455 (480)
+.+. +++++++++|+|+++++.. +.+++--.++...|++..+++|+-+. .+.+.+
T Consensus 199 ~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL 256 (330)
T 2gcg_A 199 AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDL 256 (330)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHH
T ss_pred ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHH
Confidence 3444 7888999999999999875 44543224566788877799998764 554433
No 296
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.13 E-value=0.0029 Score=63.56 Aligned_cols=115 Identities=16% Similarity=0.264 Sum_probs=69.5
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCC-----eEEEEeCCHHH----HH----HHHcCCCCCCCCChHHHHHHhcCCCEE
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSI-----EVAVVDISVPR----IN----AWNSDQLPIYEPGLEEVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~-----~V~~~D~~~~~----v~----~l~~g~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
+||+|+| +|.+|.++|..++.. +. ++.++|++.+. ++ .|+.+..++. .+.+
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~--~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~-------------~~v~ 97 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG--EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL-------------REVS 97 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-------------EEEE
T ss_pred CEEEEECCCChHHHHHHHHHHcC--CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhc-------------CCcE
Confidence 5899999 799999999999876 32 27776654322 22 2222211110 2355
Q ss_pred EecCHHHHhhcCCEEEEEccCCCCcCCCCCCCCCch-----HHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 68 FSTDVEKHVREANIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
.+++..+++++||+||++-..|..+ |.+ +.|+ +.+++..+.|.++..++.+|++ -|.|..+.-.
T Consensus 98 i~~~~y~~~~daDvVVitag~prkp---G~t-R~DLl~~N~~I~k~i~~~i~~~a~p~~ivlV-vsNPvD~~t~ 166 (375)
T 7mdh_A 98 IGIDPYEVFEDVDWALLIGAKPRGP---GME-RAALLDINGQIFADQGKALNAVASKNVKVLV-VGNPCNTNAL 166 (375)
T ss_dssp EESCHHHHTTTCSEEEECCCCCCCT---TCC-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHHH
T ss_pred EecCCHHHhCCCCEEEEcCCCCCCC---CCC-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ecCchhHHHH
Confidence 6677667799999999987665433 111 2232 3445555666666555666554 3567666433
No 297
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.13 E-value=0.0017 Score=64.52 Aligned_cols=99 Identities=11% Similarity=0.156 Sum_probs=67.5
Q ss_pred cCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcC
Q 011650 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTIN 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+. .-...+++.|.+.|.+|.+|||..... .
T Consensus 166 ~~~l~gktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~---------------------------~ 208 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLG----------QIGRALASRAEAFGMSVRYWNRSTLSG---------------------------V 208 (340)
T ss_dssp CCCCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSSCCTT---------------------------S
T ss_pred cccccCCEEEEECCC----------HHHHHHHHHHHHCCCEEEEEcCCcccc---------------------------c
Confidence 346789999999973 478899999999999999999975431 1
Q ss_pred ceEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHH
Q 011650 399 QVIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEK 454 (480)
Q Consensus 399 ~~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
...+..+++++++.+|+|+++++- ++-+++--++....|++..++||+-+ +.|.+.
T Consensus 209 ~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~a 267 (340)
T 4dgs_A 209 DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDA 267 (340)
T ss_dssp CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC-------
T ss_pred CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHH
Confidence 134567899999999999999885 34444333456678888889999855 455443
No 298
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.12 E-value=0.0017 Score=63.95 Aligned_cols=110 Identities=16% Similarity=0.222 Sum_probs=78.2
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+..+|+|+|+.. ....+++.|.+.|.+|.+||+.....+ .+. ..++..
T Consensus 30 ~~~~I~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~---~l~-------------------~~g~~~ 77 (320)
T 4dll_A 30 YARKITFLGTGS----------MGLPMARRLCEAGYALQVWNRTPARAA---SLA-------------------ALGATI 77 (320)
T ss_dssp CCSEEEEECCTT----------THHHHHHHHHHTTCEEEEECSCHHHHH---HHH-------------------TTTCEE
T ss_pred CCCEEEEECccH----------HHHHHHHHHHhCCCeEEEEcCCHHHHH---HHH-------------------HCCCEe
Confidence 456999999854 889999999999999999998643322 121 124677
Q ss_pred ecChhhhcccCcEEEEeecCcc-cccccHH--HHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011650 403 ASDAYEATKDSHGVCILTEWDE-FKNLDYQ--KIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSI 465 (480)
Q Consensus 403 ~~~~~~a~~~~d~~vi~~~~~~-~~~~~~~--~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
.+++.++++++|+|+++++.+. .+.. .. .+...+++..+|+|..+..... .+.+.|..|..-
T Consensus 78 ~~~~~e~~~~aDvVi~~vp~~~~~~~v-~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 78 HEQARAAARDADIVVSMLENGAVVQDV-LFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDT 148 (320)
T ss_dssp ESSHHHHHTTCSEEEECCSSHHHHHHH-HTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred eCCHHHHHhcCCEEEEECCCHHHHHHH-HcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 8899999999999999998753 2221 11 3445666777999998876532 234557777643
No 299
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.12 E-value=0.00063 Score=70.68 Aligned_cols=41 Identities=27% Similarity=0.439 Sum_probs=39.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
|||.|+|+|.+|..+|..|... ||+|+++|.|+++++.+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~ 44 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQD 44 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH
Confidence 8999999999999999999987 9999999999999998875
No 300
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.11 E-value=0.0015 Score=65.60 Aligned_cols=101 Identities=19% Similarity=0.288 Sum_probs=67.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCE-EEe---cCHHHHhh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNL-FFS---TDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l-~~t---~d~~~a~~ 77 (480)
.+|.|+|+|.+|...+..+... |.+|+++|+++++.+.+.+-.. ..+ ... .++.+.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 229 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFG----------------SRVELLYSNSAEIETAVA 229 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG----------------GGSEEEECCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhC----------------ceeEeeeCCHHHHHHHHc
Confidence 4799999999999999999887 8899999999999887764100 011 111 23445567
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVK 132 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g 132 (480)
++|+||-|++.|... .+.+ ..+...+.++++.+|++.+..+.|
T Consensus 230 ~~DvVI~~~~~~~~~-------~~~l-----i~~~~~~~~~~g~~ivdv~~~~gg 272 (361)
T 1pjc_A 230 EADLLIGAVLVPGRR-------APIL-----VPASLVEQMRTGSVIVDVAVDQGG 272 (361)
T ss_dssp TCSEEEECCCCTTSS-------CCCC-----BCHHHHTTSCTTCEEEETTCTTCC
T ss_pred CCCEEEECCCcCCCC-------CCee-----cCHHHHhhCCCCCEEEEEecCCCC
Confidence 899999999765321 1110 012234567888888876654433
No 301
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.11 E-value=0.00066 Score=67.37 Aligned_cols=73 Identities=8% Similarity=0.070 Sum_probs=47.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCH-HHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISV-PRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~-~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
|+||+|||+|.+|...+..+ . ++.+|+ ++|+++ ++.+++.+- .++. .-.....+|+++.++
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~--~~~~lvav~d~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~ll~~ 65 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-D--EECSITGIAPGVPEEDLSKLEKA------------ISEM-NIKPKKYNNWWEMLEK 65 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-C--TTEEEEEEECSSTTCCCHHHHHH------------HHTT-TCCCEECSSHHHHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-C--CCcEEEEEecCCchhhHHHHHHH------------HHHc-CCCCcccCCHHHHhcC
Confidence 46999999999888777666 3 478877 478876 333332210 0000 001356789988776
Q ss_pred -cCCEEEEEccCC
Q 011650 78 -EANIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
+.|+|+||+|+.
T Consensus 66 ~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 66 EKPDILVINTVFS 78 (337)
T ss_dssp HCCSEEEECSSHH
T ss_pred CCCCEEEEeCCcc
Confidence 489999998753
No 302
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.10 E-value=0.00067 Score=67.39 Aligned_cols=34 Identities=21% Similarity=0.572 Sum_probs=28.9
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||||+|+| .|++|..+...|..+ |.+++..+..+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~ 38 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVS 38 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEec
Confidence 78999999 599999999999885 67888877543
No 303
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.09 E-value=0.0023 Score=63.52 Aligned_cols=100 Identities=19% Similarity=0.249 Sum_probs=75.0
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.. -+..+++.|...|.+|.+|||.... +....++
T Consensus 146 ~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g---------------------- 192 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGR----------IGQAIAKRAKGFNMRILYYSRTRKE-EVERELN---------------------- 192 (334)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHC----------------------
T ss_pred cCCCCCEEEEEccCH----------HHHHHHHHHHhCCCEEEEECCCcch-hhHhhcC----------------------
Confidence 357889999999854 8899999999999999999998766 3222221
Q ss_pred eEEecChhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .+++++++++|+|+++++... .+++--.++...|++..+++|+-+ +.+.+
T Consensus 193 ~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~ 248 (334)
T 2dbq_A 193 AEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTN 248 (334)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHH
Confidence 333 478889999999999998765 555333566778887779999865 34533
No 304
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.09 E-value=0.0027 Score=63.04 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=75.3
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||....+. ...+ +
T Consensus 161 ~~l~g~tvgIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g 207 (335)
T 2g76_A 161 TELNGKTLGILGLG----------RIGREVATRMQSFGMKTIGYDPIISPEV-SASF----------------------G 207 (335)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSSSCHHH-HHHT----------------------T
T ss_pred cCCCcCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEECCCcchhh-hhhc----------------------C
Confidence 46789999999974 4788899999999999999999876542 2222 2
Q ss_pred eEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .++++.++.+|+|+++++.. +.+++=-.++...|++.+++||+-+ +.+.+
T Consensus 208 ~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~ 263 (335)
T 2g76_A 208 VQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEG 263 (335)
T ss_dssp CEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred cee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHH
Confidence 333 47899999999999999885 3555322466788988889999765 45644
No 305
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.09 E-value=0.00036 Score=65.41 Aligned_cols=39 Identities=5% Similarity=-0.044 Sum_probs=36.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
++|.|+|+|.+|..+|..|.+. |+ |+++|+++++++.+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~ 48 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLR 48 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh
Confidence 5799999999999999999987 89 999999999988876
No 306
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.08 E-value=0.0012 Score=64.18 Aligned_cols=65 Identities=12% Similarity=0.244 Sum_probs=44.5
Q ss_pred CceEEEECCChhHHHHHHHHHHc--CCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALK--CPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~--~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
++||+|||+|.||...+..+... .++.+++ ++|+++ ..+ ..++. .+|+++.++
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a~------------------~~g~~-~~~~~ell~ 62 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LGS------------------LDEVR-QISLEDALR 62 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CCE------------------ETTEE-BCCHHHHHH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HHH------------------HcCCC-CCCHHHHhc
Confidence 36899999999999999888641 1356766 466642 000 01233 368888776
Q ss_pred --cCCEEEEEccCC
Q 011650 78 --EANIVFVSVNTP 89 (480)
Q Consensus 78 --~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 63 ~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 63 SQEIDVAYICSESS 76 (294)
T ss_dssp CSSEEEEEECSCGG
T ss_pred CCCCCEEEEeCCcH
Confidence 689999998864
No 307
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.08 E-value=0.0021 Score=63.48 Aligned_cols=101 Identities=14% Similarity=0.163 Sum_probs=76.0
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECC-CCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDP-QVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+||| ....+ ....+ +
T Consensus 143 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~----------------------g 189 (320)
T 1gdh_A 143 KLDNKTLGIYGFG----------SIGQALAKRAQGFDMDIDYFDTHRASSS-DEASY----------------------Q 189 (320)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHH----------------------T
T ss_pred CCCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhc----------------------C
Confidence 4688999999974 4788999999999999999999 77653 22222 2
Q ss_pred eEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+.+.+++++.++++|+|+++++.. +.+++--+.....|++..+++|+-+ +.+.+.
T Consensus 190 ~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~a 247 (320)
T 1gdh_A 190 ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNEL 247 (320)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHH
T ss_pred cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHH
Confidence 345558899999999999999874 4555332456688888889999866 356443
No 308
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.06 E-value=0.0022 Score=63.57 Aligned_cols=98 Identities=14% Similarity=0.239 Sum_probs=74.4
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|.+.|.+|.+|||....+ ....+ ++
T Consensus 143 ~l~g~~vgIIG~G----------~iG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~----------------------g~ 189 (333)
T 2d0i_A 143 SLYGKKVGILGMG----------AIGKAIARRLIPFGVKLYYWSRHRKVN-VEKEL----------------------KA 189 (333)
T ss_dssp CSTTCEEEEECCS----------HHHHHHHHHHGGGTCEEEEECSSCCHH-HHHHH----------------------TE
T ss_pred CCCcCEEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCcchh-hhhhc----------------------Cc
Confidence 5688999999984 488899999999999999999987652 22222 23
Q ss_pred EEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 401 IVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
.+. +++++++++|+|+++++.. +.+++--+.+...|++. +++|+-+ +.+.+
T Consensus 190 ~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~ 243 (333)
T 2d0i_A 190 RYM-DIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEK 243 (333)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHH
T ss_pred eec-CHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHH
Confidence 443 7888899999999999987 66664334556788877 9999865 44543
No 309
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.0013 Score=68.39 Aligned_cols=72 Identities=17% Similarity=0.308 Sum_probs=52.4
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEE----ecCHHHHh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFF----STDVEKHV 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~----t~d~~~a~ 76 (480)
+++|.|+|+|.+|.+++..|++. +|++|+++++++++.+++.+.. .+ ..+.+ ..++.+++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~~-~~--------------~~~~~D~~d~~~l~~~l 86 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKPS-GS--------------KAISLDVTDDSALDKVL 86 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGGG-TC--------------EEEECCTTCHHHHHHHH
T ss_pred CCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhc-CC--------------cEEEEecCCHHHHHHHH
Confidence 36899999999999999999976 3689999999999988876420 00 00000 01344557
Q ss_pred hcCCEEEEEccC
Q 011650 77 REANIVFVSVNT 88 (480)
Q Consensus 77 ~~aDvVii~Vpt 88 (480)
+++|+||.|+|.
T Consensus 87 ~~~DvVIn~tp~ 98 (467)
T 2axq_A 87 ADNDVVISLIPY 98 (467)
T ss_dssp HTSSEEEECSCG
T ss_pred cCCCEEEECCch
Confidence 789999999874
No 310
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.05 E-value=0.0029 Score=61.98 Aligned_cols=100 Identities=23% Similarity=0.265 Sum_probs=74.9
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||....+ ....+ +
T Consensus 138 ~~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~----------------------g 184 (307)
T 1wwk_A 138 IELEGKTIGIIGFG----------RIGYQVAKIANALGMNILLYDPYPNEE-RAKEV----------------------N 184 (307)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHT----------------------T
T ss_pred cccCCceEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCCChh-hHhhc----------------------C
Confidence 35689999999974 478899999999999999999987763 22222 2
Q ss_pred eEEecChhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .++++.++++|+|+++++... .+++--......|++..+++|+-+ +.+.+
T Consensus 185 ~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 185 GKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHH
Confidence 333 378899999999999998743 555332456678888889999866 45644
No 311
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.05 E-value=0.0023 Score=64.24 Aligned_cols=104 Identities=18% Similarity=0.211 Sum_probs=77.9
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCe-EEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcC
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKAR-LSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTIN 398 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
..+.+++|+|+|+. .-...+++.|...|++ |.+||+.....+....+
T Consensus 160 ~~l~g~tvgIIG~G----------~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~---------------------- 207 (364)
T 2j6i_A 160 YDIEGKTIATIGAG----------RIGYRVLERLVPFNPKELLYYDYQALPKDAEEKV---------------------- 207 (364)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHT----------------------
T ss_pred ccCCCCEEEEECcC----------HHHHHHHHHHHhCCCcEEEEECCCccchhHHHhc----------------------
Confidence 45789999999974 5788999999999997 99999876443332322
Q ss_pred ceEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 399 QVIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
++....++++.++.+|+|+++++.. +.+++--+.....|++..++||+-+ +.+.+.+
T Consensus 208 g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL 267 (364)
T 2j6i_A 208 GARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDV 267 (364)
T ss_dssp TEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred CcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHH
Confidence 2445568999999999999999884 5555333456788988889999876 5665543
No 312
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.04 E-value=0.0015 Score=64.15 Aligned_cols=110 Identities=7% Similarity=0.029 Sum_probs=77.6
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+-.+|+|+|+.. ....+++.|.+.|.+|.+||+.....+.... .++..
T Consensus 20 ~m~~I~iIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~----------------------~g~~~ 67 (310)
T 3doj_A 20 HMMEVGFLGLGI----------MGKAMSMNLLKNGFKVTVWNRTLSKCDELVE----------------------HGASV 67 (310)
T ss_dssp CSCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----------------------TTCEE
T ss_pred cCCEEEEECccH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------------------CCCeE
Confidence 446999999855 8999999999999999999986544222222 23567
Q ss_pred ecChhhhcccCcEEEEeecCcc-ccccc--HHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011650 403 ASDAYEATKDSHGVCILTEWDE-FKNLD--YQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~~d~~vi~~~~~~-~~~~~--~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
.+++.++++++|+|+++++.+. .++.- .+.+...+++..+|+|..+..... .+.+.|..|..
T Consensus 68 ~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 68 CESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp CSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 7899999999999999997753 32211 023445566677999998876432 23355777754
No 313
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.04 E-value=0.00091 Score=65.41 Aligned_cols=110 Identities=15% Similarity=0.191 Sum_probs=77.1
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+||+++||. .....+++.|.+.|++|.+||......+.... .+.+.++
T Consensus 4 ~kIgfIGlG----------~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~----------------------~Ga~~a~ 51 (300)
T 3obb_A 4 KQIAFIGLG----------HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----------------------AGASAAR 51 (300)
T ss_dssp CEEEEECCS----------TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH----------------------TTCEECS
T ss_pred CEEEEeeeh----------HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------cCCEEcC
Confidence 589999995 48999999999999999999975433221111 3467889
Q ss_pred ChhhhcccCcEEEEeecCccc-ccc--cHHHHHhhcCCCCEEEEcCCCCCh------HHHhhcCcEEEEec
Q 011650 405 DAYEATKDSHGVCILTEWDEF-KNL--DYQKIYNNMQKPAFVFDGRNILDV------EKLRKIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~~-~~~--~~~~~~~~~~~~~~i~D~~~~~~~------~~~~~~g~~y~~iG 466 (480)
|+.|+++++|+|+++...++- ++. ....+...+++..+|||+..+-+. +.+++.|+.|.--.
T Consensus 52 s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 52 SARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp SHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred CHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 999999999999998876531 111 001123344556799999998763 34456799887543
No 314
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.02 E-value=0.002 Score=63.98 Aligned_cols=101 Identities=11% Similarity=0.160 Sum_probs=75.9
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||....... .. ++
T Consensus 138 ~l~g~tvgIiG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~----------------------g~ 183 (334)
T 2pi1_A 138 ELNRLTLGVIGTG----------RIGSRVAMYGLAFGMKVLCYDVVKREDLK--EK----------------------GC 183 (334)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHHH--HT----------------------TC
T ss_pred eccCceEEEECcC----------HHHHHHHHHHHHCcCEEEEECCCcchhhH--hc----------------------Cc
Confidence 4578999999983 47889999999999999999998765421 11 23
Q ss_pred EEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 401 IVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.+. ++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.+.+.+.
T Consensus 184 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~ 241 (334)
T 2pi1_A 184 VYT-SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALY 241 (334)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred eec-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 443 589999999999999986 35555433466788988889999865 66655443
No 315
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.01 E-value=0.003 Score=54.28 Aligned_cols=106 Identities=15% Similarity=0.049 Sum_probs=73.8
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+.++|+|+|++-++ ++.+..+++.|.+.|++|...||... ++ .++..
T Consensus 13 ~p~~IavIGaS~~~------g~~G~~~~~~L~~~G~~V~~vnp~~~--~i-------------------------~G~~~ 59 (138)
T 1y81_A 13 EFRKIALVGASKNP------AKYGNIILKDLLSKGFEVLPVNPNYD--EI-------------------------EGLKC 59 (138)
T ss_dssp -CCEEEEETCCSCT------TSHHHHHHHHHHHTTCEEEEECTTCS--EE-------------------------TTEEC
T ss_pred CCCeEEEEeecCCC------CCHHHHHHHHHHHCCCEEEEeCCCCC--eE-------------------------CCeee
Confidence 56799999998765 57899999999999999999999742 11 23556
Q ss_pred ecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChH---HHhhcCcEEEE
Q 011650 403 ASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVE---KLRKIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y~~ 464 (480)
..|+.+..+..|+++++++-+.-.+ -.+++.+ ...+.++++.... .++ ..++.|++|.|
T Consensus 60 ~~s~~el~~~vDlvii~vp~~~v~~-v~~~~~~-~g~~~i~~~~~~~-~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 60 YRSVRELPKDVDVIVFVVPPKVGLQ-VAKEAVE-AGFKKLWFQPGAE-SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp BSSGGGSCTTCCEEEECSCHHHHHH-HHHHHHH-TTCCEEEECTTSC-CHHHHHHHHHHTCEEEC
T ss_pred cCCHHHhCCCCCEEEEEeCHHHHHH-HHHHHHH-cCCCEEEEcCccH-HHHHHHHHHHCCCEEEc
Confidence 6788888889999999999433222 2233434 3445578887653 433 34467998865
No 316
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.01 E-value=0.00069 Score=65.62 Aligned_cols=103 Identities=9% Similarity=0.024 Sum_probs=67.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+.. .. .+.+.+. ++++...++|
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------~~--~~~~~~~-~~~~l~~~aD 189 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELV------------AA--YGEVKAQ-AFEQLKQSYD 189 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHH------------GG--GSCEEEE-EGGGCCSCEE
T ss_pred CEEEEECchHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHh------------hc--cCCeeEe-eHHHhcCCCC
Confidence 4799999999999999999998 85 9999999999988776420 00 0123332 3344336899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+||-|+|.....+ .+.+. ...++++.+|++.+..|.. |..+
T Consensus 190 iIInaTp~gm~~~------~~~l~---------~~~l~~~~~V~DlvY~P~~-T~ll 230 (281)
T 3o8q_A 190 VIINSTSASLDGE------LPAID---------PVIFSSRSVCYDMMYGKGY-TVFN 230 (281)
T ss_dssp EEEECSCCCC----------CSCC---------GGGEEEEEEEEESCCCSSC-CHHH
T ss_pred EEEEcCcCCCCCC------CCCCC---------HHHhCcCCEEEEecCCCcc-CHHH
Confidence 9999988653210 11110 1345678888888877644 4444
No 317
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.01 E-value=0.002 Score=64.07 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=75.1
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||....+ .. ..+
T Consensus 145 ~l~gktvgIiGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~------------------------~~~ 189 (343)
T 2yq5_A 145 EIYNLTVGLIGVG----------HIGSAVAEIFSAMGAKVIAYDVAYNPE-FE------------------------PFL 189 (343)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCGG-GT------------------------TTC
T ss_pred ccCCCeEEEEecC----------HHHHHHHHHHhhCCCEEEEECCChhhh-hh------------------------ccc
Confidence 4578999999984 478899999999999999999987542 11 113
Q ss_pred EEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 401 IVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.+. +++++++.+|+|+++++. ++-+.+--.+....|++.+++||+-+ +.|.+.+.
T Consensus 190 ~~~-~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~ 247 (343)
T 2yq5_A 190 TYT-DFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALI 247 (343)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHH
T ss_pred ccc-CHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHH
Confidence 333 899999999999999996 34444333456678988889999975 66765443
No 318
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.00 E-value=0.005 Score=63.65 Aligned_cols=114 Identities=13% Similarity=0.126 Sum_probs=68.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH----HHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV----PRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~----~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+||.|||+|..|.+.|..|.++ |++|+++|.++ ...+.|.+...+ +....+.++.+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~~~~~~~~~~L~~~gi~-----------------~~~g~~~~~~~~ 70 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKPFDENPTAQSLLEEGIK-----------------VVCGSHPLELLD 70 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSCGGGCHHHHHHHHTTCE-----------------EEESCCCGGGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCcccCChHHHHHHhCCCE-----------------EEECCChHHhhc
Confidence 4899999999999999999998 99999999854 233444432111 222233333346
Q ss_pred c-CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHH---------HHHhhCCCCcEEEEecCCCcccHHH-HHHHHHhhc
Q 011650 78 E-ANIVFVSVNTPTKTQGLGAGKAADLTYWESAAR---------MIADVSKSDKIVVEKSTVPVKTAEA-IEKILMHNS 145 (480)
Q Consensus 78 ~-aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---------~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+ +|+||++..-|.+ .|. +..+.+ ++...+.+..+|-+..|..-+||.. +..+|++.+
T Consensus 71 ~~~d~vv~spgi~~~--------~p~---~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 71 EDFCYMIKNPGIPYN--------NPM---VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp SCEEEEEECTTSCTT--------SHH---HHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCcCCCC--------Chh---HHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 6 8999887543321 232 222222 1222223457777777776666555 567777653
No 319
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.98 E-value=0.0005 Score=64.35 Aligned_cols=74 Identities=14% Similarity=0.243 Sum_probs=48.6
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPS-IEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
||+|.|.| .|.+|..++..|++. | ++|+++++++++.+.+......+.. ..++-..++++++++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~~------------~Dl~d~~~~~~~~~~ 88 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQIIM------------GDVLNHAALKQAMQG 88 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEEE------------CCTTCHHHHHHHHTT
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEEE------------ecCCCHHHHHHHhcC
Confidence 45788998 699999999999998 8 8999999998764432211100000 011101233456788
Q ss_pred CCEEEEEccC
Q 011650 79 ANIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|+||.|.+.
T Consensus 89 ~D~vv~~a~~ 98 (236)
T 3qvo_A 89 QDIVYANLTG 98 (236)
T ss_dssp CSEEEEECCS
T ss_pred CCEEEEcCCC
Confidence 9999988753
No 320
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.97 E-value=0.0027 Score=62.97 Aligned_cols=93 Identities=11% Similarity=0.160 Sum_probs=71.9
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|.+.|.+|.+|||...... +
T Consensus 160 ~~l~g~~vgIIG~G----------~iG~~vA~~l~~~G~~V~~~dr~~~~~~---------------------------g 202 (333)
T 3ba1_A 160 TKFSGKRVGIIGLG----------RIGLAVAERAEAFDCPISYFSRSKKPNT---------------------------N 202 (333)
T ss_dssp CCCTTCCEEEECCS----------HHHHHHHHHHHTTTCCEEEECSSCCTTC---------------------------C
T ss_pred cccCCCEEEEECCC----------HHHHHHHHHHHHCCCEEEEECCCchhcc---------------------------C
Confidence 46789999999984 4889999999999999999999754310 2
Q ss_pred eEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCC
Q 011650 400 VIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNI 449 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
+....+++++++++|+|+++++.. +.+++--+++...|++..+|+|+-+-
T Consensus 203 ~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG 253 (333)
T 3ba1_A 203 YTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRG 253 (333)
T ss_dssp SEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred ceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 234568899999999999999874 56664324556778877799998763
No 321
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.95 E-value=0.0022 Score=67.70 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=76.4
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|.+.|.+|.+|||....+. ...+ +
T Consensus 138 ~~l~g~~vgIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~-a~~~----------------------g 184 (529)
T 1ygy_A 138 TEIFGKTVGVVGLG----------RIGQLVAQRIAAFGAYVVAYDPYVSPAR-AAQL----------------------G 184 (529)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECTTSCHHH-HHHH----------------------T
T ss_pred cccCCCEEEEEeeC----------HHHHHHHHHHHhCCCEEEEECCCCChhH-HHhc----------------------C
Confidence 35789999999984 3788899999999999999999875433 2222 2
Q ss_pred eEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+... +++++++.+|+|+++++.. +.+++--+.+...|++..+|+|+-. +.+.+.
T Consensus 185 ~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~a 241 (529)
T 1ygy_A 185 IELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAA 241 (529)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHH
T ss_pred cEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHH
Confidence 3344 7889999999999999987 6666533456778888789999865 455433
No 322
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.95 E-value=0.0022 Score=62.27 Aligned_cols=65 Identities=18% Similarity=0.153 Sum_probs=48.2
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|+|+ |.||..++..+.+. |++ .++++|+.+. +. .. .++.+..+++++.. .
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~--g~~-~V~~V~p~~~-----g~-~~--------------~G~~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY--GTK-MVGGVTPGKG-----GT-TH--------------LGLPVFNTVREAVAATG 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCe-EEEEeCCCcc-----cc-ee--------------CCeeccCCHHHHhhcCC
Confidence 58999998 99999999999887 888 4455555321 10 00 24677888888777 8
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|++++|+|.+
T Consensus 65 ~D~viI~tP~~ 75 (288)
T 2nu8_A 65 ATASVIYVPAP 75 (288)
T ss_dssp CCEEEECCCGG
T ss_pred CCEEEEecCHH
Confidence 99999999854
No 323
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.94 E-value=0.0005 Score=63.41 Aligned_cols=104 Identities=11% Similarity=0.182 Sum_probs=61.0
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEE-ecCHHHHhhcC
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFF-STDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~~~a 79 (480)
|||.|.| .|.+|..++..|+++ |++|+++++++++.+.+ .+ ..+.. +.+.- ..++.++++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-~~-~~~~~------------~D~~d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY-NN-VKAVH------------FDVDWTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC-TT-EEEEE------------CCTTSCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc-CC-ceEEE------------ecccCCHHHHHHHHcCC
Confidence 7999999 799999999999998 99999999998654322 00 00000 11100 11234456789
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
|+||-|....... ....++......++...+. ..+.+|..+|
T Consensus 65 d~vi~~ag~~~~~-----~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS 106 (219)
T 3dqp_A 65 DAIINVSGSGGKS-----LLKVDLYGAVKLMQAAEKA-EVKRFILLST 106 (219)
T ss_dssp SEEEECCCCTTSS-----CCCCCCHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CEEEECCcCCCCC-----cEeEeHHHHHHHHHHHHHh-CCCEEEEECc
Confidence 9999998654221 1133444444444444332 2235554444
No 324
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.93 E-value=0.0037 Score=61.39 Aligned_cols=100 Identities=15% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||...... ...+ +
T Consensus 138 ~~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g 184 (313)
T 2ekl_A 138 LELAGKTIGIVGFG----------RIGTKVGIIANAMGMKVLAYDILDIREK-AEKI----------------------N 184 (313)
T ss_dssp CCCTTCEEEEESCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHT----------------------T
T ss_pred CCCCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCCcchhH-HHhc----------------------C
Confidence 35789999999974 4788999999999999999999876642 2222 2
Q ss_pred eEEecChhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .++++.++.+|+|+++++... .+++--+.....|++..+++|+-+ +.+.+
T Consensus 185 ~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~ 240 (313)
T 2ekl_A 185 AKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGK 240 (313)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHH
T ss_pred cee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHH
Confidence 333 378899999999999998743 554322456678888889999865 55644
No 325
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.90 E-value=0.0043 Score=58.68 Aligned_cols=32 Identities=22% Similarity=0.483 Sum_probs=26.3
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEE-EeC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAV-VDI 34 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~-~D~ 34 (480)
|||+|+|+ |.||..++..+... +++++.+ +|+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEcc
Confidence 79999996 99999999988754 5888874 554
No 326
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.89 E-value=0.0026 Score=62.77 Aligned_cols=103 Identities=8% Similarity=0.089 Sum_probs=76.0
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+||+.....+. ...
T Consensus 133 ~~l~gktvGIiGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------------------~~~ 178 (324)
T 3evt_A 133 STLTGQQLLIYGTG----------QIGQSLAAKASALGMHVIGVNTTGHPADH------------------------FHE 178 (324)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSCCCCTT------------------------CSE
T ss_pred ccccCCeEEEECcC----------HHHHHHHHHHHhCCCEEEEECCCcchhHh------------------------Hhh
Confidence 46789999999983 47899999999999999999987543211 011
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.....++++.++.+|+|+++++. ++-+++--.+..+.|++.+++||+-+ +.+.+.+.
T Consensus 179 ~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~ 238 (324)
T 3evt_A 179 TVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALM 238 (324)
T ss_dssp EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHH
T ss_pred ccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHH
Confidence 22245789999999999999885 45555433566778988889999875 66655443
No 327
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.88 E-value=0.0045 Score=59.88 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=55.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEec--CHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFST--DVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~--d~~~a~~~ 78 (480)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+. +-.......+...+ ++.+.+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~-----------~~~~~~~~~i~~~~~~~l~~~l~~ 194 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADV-----------INNAVGREAVVGVDARGIEDVIAA 194 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHH-----------HHHHHTSCCEEEECSTTHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHH-----------HHhhcCCceEEEcCHHHHHHHHhc
Confidence 4789999999999999999998 87 799999999998877541 00000011244444 67777889
Q ss_pred CCEEEEEccCC
Q 011650 79 ANIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+||-|+|..
T Consensus 195 ~DiVInaTp~G 205 (283)
T 3jyo_A 195 ADGVVNATPMG 205 (283)
T ss_dssp SSEEEECSSTT
T ss_pred CCEEEECCCCC
Confidence 99999998753
No 328
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.87 E-value=0.0038 Score=59.71 Aligned_cols=71 Identities=18% Similarity=0.343 Sum_probs=55.0
Q ss_pred ceEEEECCC-hhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAG-YVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.| .+|.++|..|... |.+|+++++. |.++++.++.||
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~--gAtVtv~~~~---------------------------------t~~L~~~~~~AD 195 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR--NYTVSVCHSK---------------------------------TKDIGSMTRSSK 195 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHHSS
T ss_pred CEEEEEcCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------cccHHHhhccCC
Confidence 479999987 5899999999998 8999999752 245667789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|..- . ...+++|++||+.+
T Consensus 196 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvg 222 (276)
T 3ngx_A 196 IVVVAVGRPGFL---------N-----------REMVTPGSVVIDVG 222 (276)
T ss_dssp EEEECSSCTTCB---------C-----------GGGCCTTCEEEECC
T ss_pred EEEECCCCCccc---------c-----------HhhccCCcEEEEec
Confidence 999999876321 1 13468899998744
No 329
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.87 E-value=0.0029 Score=65.54 Aligned_cols=88 Identities=19% Similarity=0.114 Sum_probs=64.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|+|+|.+|..+|..|+.. |.+|+++|+++.+.+..... ... ..+.++++..+|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~~~~a~~Aa~~-------------------g~d-v~~lee~~~~aDv 323 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQA--GARVIVTEIDPICALQATME-------------------GLQ-VLTLEDVVSEADI 323 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCE-ECCGGGTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-------------------CCc-cCCHHHHHHhcCE
Confidence 4689999999999999999998 99999999999876654431 122 2456677889999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.+..++.- .+ ......++++.+|++.+-
T Consensus 324 Vi~atG~~~v---------l~--------~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 324 FVTTTGNKDI---------IM--------LDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp EEECSSCSCS---------BC--------HHHHTTSCTTEEEEESSS
T ss_pred EEeCCCChhh---------hh--------HHHHHhcCCCeEEEEcCC
Confidence 9988764311 11 123456788888887653
No 330
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.85 E-value=0.00046 Score=64.08 Aligned_cols=67 Identities=18% Similarity=0.363 Sum_probs=44.4
Q ss_pred ceEEEECCChhHHHHHHH--HHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 2 VKICCIGAGYVGGPTMAV--IALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~--La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++|+|||+|.+|..++.. +... |++++ ++|.|++++.....+ -.+...+++++.++.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~--g~~iVg~~D~dp~k~g~~i~g------------------v~V~~~~dl~eli~~ 145 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN--NTKISMAFDINESKIGTEVGG------------------VPVYNLDDLEQHVKD 145 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC--------CCEEEEEESCTTTTTCEETT------------------EEEEEGGGHHHHCSS
T ss_pred CEEEEEccCHHHHHHHHHHhcccC--CcEEEEEEeCCHHHHHhHhcC------------------CeeechhhHHHHHHh
Confidence 579999999999999994 3333 77766 579998765432211 013345677777765
Q ss_pred CCEEEEEccC
Q 011650 79 ANIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
.|++++|+|+
T Consensus 146 ~D~ViIAvPs 155 (215)
T 2vt3_A 146 ESVAILTVPA 155 (215)
T ss_dssp CCEEEECSCH
T ss_pred CCEEEEecCc
Confidence 6999999884
No 331
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.84 E-value=0.002 Score=62.24 Aligned_cols=108 Identities=8% Similarity=0.013 Sum_probs=75.6
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....++..|.+.|.+|.+||+.....+.... .++...+
T Consensus 2 ~~I~iiG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~~ 49 (287)
T 3pdu_A 2 TTYGFLGLGI----------MGGPMAANLVRAGFDVTVWNRNPAKCAPLVA----------------------LGARQAS 49 (287)
T ss_dssp CCEEEECCST----------THHHHHHHHHHHTCCEEEECSSGGGGHHHHH----------------------HTCEECS
T ss_pred CeEEEEccCH----------HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----------------------CCCeecC
Confidence 3799999754 8899999999999999999986544222221 2356778
Q ss_pred ChhhhcccCcEEEEeecCc-ccccccH--HHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011650 405 DAYEATKDSHGVCILTEWD-EFKNLDY--QKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~-~~~~~~~--~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+ ..++.-. +.+...+++..+|+|........ .+.+.|..|..
T Consensus 50 ~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 50 SPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp CHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999999999999999876 3332110 23445566667999998865431 23345777754
No 332
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.83 E-value=0.0033 Score=63.99 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=75.6
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+|||..... ...
T Consensus 141 ~el~gktlGiIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------------------~~~ 184 (404)
T 1sc6_A 141 FEARGKKLGIIGYG----------HIGTQLGILAESLGMYVYFYDIENKLP--------------------------LGN 184 (404)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCCC--------------------------CTT
T ss_pred cccCCCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEEcCCchhc--------------------------cCC
Confidence 35789999999984 478899999999999999999964321 012
Q ss_pred eEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHH
Q 011650 400 VIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+....++++.++.+|+|+++++.. +.+++--+.....|++..++||+-+ +.+.+.
T Consensus 185 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~a 242 (404)
T 1sc6_A 185 ATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPA 242 (404)
T ss_dssp CEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHH
T ss_pred ceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHH
Confidence 345668999999999999999884 5555432456688998889999866 556543
No 333
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.82 E-value=0.0048 Score=61.20 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=33.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEE-eC--CHHHHHHHHc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI--SVPRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~--~~~~v~~l~~ 44 (480)
+||||+|.|++|.-++..+..+ ++.+|.++ |+ +.+....+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-~~vevvaI~d~~~~~~~~a~l~~ 48 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-GKVDIVAINDPFIDLNYMVYMFQ 48 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSSEEEEEECSSSCHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcC-CCcEEEEecCCCCCHHHHHHHhh
Confidence 4999999999999999998876 57887765 53 6777666554
No 334
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.81 E-value=0.0042 Score=61.62 Aligned_cols=101 Identities=11% Similarity=0.177 Sum_probs=76.4
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|..-|.+|.+|||........ ..
T Consensus 137 ~~l~g~tvGIiG~G----------~IG~~va~~~~~fg~~v~~~d~~~~~~~~~------------------------~~ 182 (334)
T 3kb6_A 137 RELNRLTLGVIGTG----------RIGSRVAMYGLAFGMKVLCYDVVKREDLKE------------------------KG 182 (334)
T ss_dssp CCGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------------------TT
T ss_pred ceecCcEEEEECcc----------hHHHHHHHhhcccCceeeecCCccchhhhh------------------------cC
Confidence 35678999999974 478899999999999999999986543221 11
Q ss_pred eEEecChhhhcccCcEEEEeecC-ccccc-ccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKN-LDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
+. ..++++.++.+|+|+++++. ++-++ ++. +..+.|++.+++|.+-+ ++|.+.+-
T Consensus 183 ~~-~~~l~ell~~sDivslh~Plt~~T~~li~~-~~l~~mk~~a~lIN~aRG~iVde~aL~ 241 (334)
T 3kb6_A 183 CV-YTSLDELLKESDVISLHVPYTKETHHMINE-ERISLMKDGVYLINTARGKVVDTDALY 241 (334)
T ss_dssp CE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCH-HHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred ce-ecCHHHHHhhCCEEEEcCCCChhhccCcCH-HHHhhcCCCeEEEecCccccccHHHHH
Confidence 23 35789999999999999987 55555 454 45578988888998865 78876554
No 335
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.79 E-value=0.0045 Score=64.47 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=83.3
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. ....++..|.++|++|.+||......+.....+ ..-..+..+
T Consensus 4 ~~kIgiIGlG~----------MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g-----------------~~g~~i~~~ 56 (484)
T 4gwg_A 4 QADIALIGLAV----------MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE-----------------AKGTKVVGA 56 (484)
T ss_dssp CBSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT-----------------TTTSSCEEC
T ss_pred CCEEEEEChhH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcc-----------------cCCCceecc
Confidence 45899999865 899999999999999999998654432211110 000134456
Q ss_pred cChhhhcc---cCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCCh------HHHhhcCcEEEEecCCC
Q 011650 404 SDAYEATK---DSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDV------EKLRKIGFIVYSIGKPL 469 (480)
Q Consensus 404 ~~~~~a~~---~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~------~~~~~~g~~y~~iG~~~ 469 (480)
.++.++++ ++|+|+++++.+ ..++ -.+.+...+++..+|||+.+.... +.+.+.|+.|.+.+...
T Consensus 57 ~s~~e~v~~l~~aDvVil~Vp~~~~v~~-vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 57 QSLKEMVSKLKKPRRIILLVKAGQAVDD-FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp SSHHHHHHTBCSSCEEEECSCSSHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred CCHHHHHhhccCCCEEEEecCChHHHHH-HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 78888776 599999999986 4433 245777778777799999998853 23446799998876533
No 336
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.76 E-value=0.0038 Score=63.54 Aligned_cols=99 Identities=22% Similarity=0.227 Sum_probs=72.6
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|.+|.+|||.-... ....
T Consensus 153 el~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~yd~~~~~~--------------------------~~~~ 196 (416)
T 3k5p_A 153 EVRGKTLGIVGYG----------NIGSQVGNLAESLGMTVRYYDTSDKLQ--------------------------YGNV 196 (416)
T ss_dssp CSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECTTCCCC--------------------------BTTB
T ss_pred cCCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCcchhc--------------------------ccCc
Confidence 4678999999984 478899999999999999999963211 0123
Q ss_pred EEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 401 IVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
....++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.|.+.+
T Consensus 197 ~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL 254 (416)
T 3k5p_A 197 KPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEAL 254 (416)
T ss_dssp EECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHH
T ss_pred EecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHH
Confidence 4567899999999999999987 44444333456678998889999865 5665443
No 337
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.73 E-value=0.0031 Score=62.37 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=66.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcC-------CCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHHH-hcCCCEEEec-
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKC-------PSIEVAV-VDISVPRINAWNSDQLPIYEPGLEEVVKQ-CRGKNLFFST- 70 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~-------~G~~V~~-~D~~~~~v~~l~~g~~~~~e~~l~~~~~~-~~~~~l~~t~- 70 (480)
|+||+|||+|.||..++..|.++. ++.+|++ +|+++.+.+. ..+.+.+.. ...+ .+++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~----------id~~~~~~~~~~~~--~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD----------FSLVEALRMKRETG--MLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS----------CCHHHHHHHHHHHS--SCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc----------cCHHHHHhhhccCc--cccCC
Confidence 789999999999999999987641 3566665 5766433211 001111100 0001 1233
Q ss_pred -CHHHHhh--cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcc-cHHHHHHHHHhh
Q 011650 71 -DVEKHVR--EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVK-TAEAIEKILMHN 144 (480)
Q Consensus 71 -d~~~a~~--~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-t~~~l~~~l~~~ 144 (480)
|+++.+. +.|+|++|+|+..+. .+ +.+.+...+..|.-|+...+-|.. ..+++.+..++.
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~-------------~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~ 133 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDG-------------GE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERN 133 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC-----------------C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHhcCCCCCEEEECCCCcccc-------------hh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhh
Confidence 7777664 589999998865321 11 344455667788888876554433 223444444443
No 338
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.72 E-value=0.0024 Score=62.32 Aligned_cols=109 Identities=11% Similarity=0.026 Sum_probs=74.4
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEE-
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV- 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 402 (480)
..+|+|+|+.. ....++..|.+.|.+|.+||+.....+..... +...
T Consensus 7 ~~~I~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----------------------g~~~~ 54 (303)
T 3g0o_A 7 DFHVGIVGLGS----------MGMGAARSCLRAGLSTWGADLNPQACANLLAE----------------------GACGA 54 (303)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----------------------TCSEE
T ss_pred CCeEEEECCCH----------HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----------------------CCccc
Confidence 46899999865 89999999999999999999864332211111 2233
Q ss_pred ecChhhhcccCcEEEEeecCcc-ccccc--HHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011650 403 ASDAYEATKDSHGVCILTEWDE-FKNLD--YQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~~d~~vi~~~~~~-~~~~~--~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
..++.++++++|+|+++++.+. .+..- .+.+...+++..+|+|+.+..... .+.+.|..|..
T Consensus 55 ~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 55 AASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp ESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 6788999999999999998753 22210 023345566667999998865421 23345777765
No 339
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.72 E-value=0.0028 Score=57.18 Aligned_cols=73 Identities=26% Similarity=0.301 Sum_probs=48.2
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|.|.|. |.+|..++..|+++ |++|+++++++++.+.+......+.. ..+.-..++.++++++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~~~~~~~~~~~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVV------------GDVLQAADVDKTVAGQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEE------------SCTTSHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEE------------ecCCCHHHHHHHHcCCC
Confidence 68999997 99999999999998 99999999998654322111000000 00000112345577899
Q ss_pred EEEEEccC
Q 011650 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 70 ~vi~~a~~ 77 (206)
T 1hdo_A 70 AVIVLLGT 77 (206)
T ss_dssp EEEECCCC
T ss_pred EEEECccC
Confidence 99998764
No 340
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.71 E-value=0.0031 Score=62.79 Aligned_cols=106 Identities=12% Similarity=0.086 Sum_probs=61.3
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEE-eCCHHHHHHHHc-CCCCCCCCC-hHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DISVPRINAWNS-DQLPIYEPG-LEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~~~~~v~~l~~-g~~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||||+|+|.+|..++..|..+ ++++|.++ |.+++....+.+ .....+..- ...-+.....+.+.+..+..+...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~-~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~ 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQ-DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc
Confidence 35999999999999999998875 46786654 666665554443 111111110 011110001123444455566567
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHH-HhhCCCCcEEEE
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMI-ADVSKSDKIVVE 125 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i-~~~l~~~~iVi~ 125 (480)
++|+||.|+|... + .+.. ..+++.|+.||+
T Consensus 81 ~vDiV~eatg~~~-------------s-----~~~a~~~~l~aG~~VI~ 111 (343)
T 2yyy_A 81 DADIVVDGAPKKI-------------G-----KQNLENIYKPHKVKAIL 111 (343)
T ss_dssp GCSEEEECCCTTH-------------H-----HHHHHHTTTTTTCEEEE
T ss_pred CCCEEEECCCccc-------------c-----HHHHHHHHHHCCCEEEE
Confidence 9999999976421 0 1222 367888887775
No 341
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.70 E-value=0.0047 Score=60.39 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=72.5
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|.+|.+|||... +. . .
T Consensus 121 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~dr~~~-~~--~-------------------------~ 162 (303)
T 1qp8_A 121 LIQGEKVAVLGLG----------EIGTRVGKILAALGAQVRGFSRTPK-EG--P-------------------------W 162 (303)
T ss_dssp CCTTCEEEEESCS----------THHHHHHHHHHHTTCEEEEECSSCC-CS--S-------------------------S
T ss_pred CCCCCEEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCcc-cc--C-------------------------c
Confidence 5788999999973 5888999999999999999998754 11 0 1
Q ss_pred EEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 401 IVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
....++++.++.+|+|+++++.. +.+++=-++....|++..+++|+-+ +.+.+
T Consensus 163 ~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~ 218 (303)
T 1qp8_A 163 RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRD 218 (303)
T ss_dssp CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHH
Confidence 12357889999999999999885 4555432466788988889999976 45643
No 342
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.70 E-value=0.0015 Score=60.77 Aligned_cols=71 Identities=15% Similarity=0.141 Sum_probs=54.2
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCC-CCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQL-PIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~-~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|+|.|.|. |.+|..++..|+++ |++|+++++++++.+.+..... .+.. +.++ .++.+++.++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~------------~Dl~--~~~~~~~~~~ 85 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVV------------ANLE--EDFSHAFASI 85 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEE------------CCTT--SCCGGGGTTC
T ss_pred CeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEE------------cccH--HHHHHHHcCC
Confidence 78999997 99999999999998 9999999999998877765322 1111 1111 4456668899
Q ss_pred CEEEEEccC
Q 011650 80 NIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-+...
T Consensus 86 D~vi~~ag~ 94 (236)
T 3e8x_A 86 DAVVFAAGS 94 (236)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999764
No 343
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.69 E-value=0.0022 Score=60.70 Aligned_cols=79 Identities=15% Similarity=0.138 Sum_probs=55.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|+++|+|.||..++.. . ++++. +|+ +++ +.. +..+++|+++.+.++|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~--~leLv~v~~---~k~-----gel-----------------gv~a~~d~d~lla~pD 62 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G--NFEKIYAYD---RIS-----KDI-----------------PGVVRLDEFQVPSDVS 62 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S--CCSEEEEEC---SSC-----CCC-----------------SSSEECSSCCCCTTCC
T ss_pred ceEEEECcCHHHHHHHhc---C--CcEEEEEEe---ccc-----ccc-----------------CceeeCCHHHHhhCCC
Confidence 899999999999998887 3 67765 455 221 110 2346788887778999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+|+.|-+. ..+.+.+.+.|+.|.-|+..|.
T Consensus 63 ~VVe~A~~------------------~av~e~~~~iL~aG~dvv~~S~ 92 (253)
T 1j5p_A 63 TVVECASP------------------EAVKEYSLQILKNPVNYIIIST 92 (253)
T ss_dssp EEEECSCH------------------HHHHHHHHHHTTSSSEEEECCG
T ss_pred EEEECCCH------------------HHHHHHHHHHHHCCCCEEEcCh
Confidence 99999531 2223346778888888877664
No 344
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.69 E-value=0.0066 Score=58.78 Aligned_cols=72 Identities=17% Similarity=0.340 Sum_probs=56.0
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|++++.. +.++++.++.||
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 210 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSK---------------------------------TAHLDEEVNKGD 210 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHhC--CCeEEEEECC---------------------------------cccHHHHhccCC
Confidence 4799999995 899999999998 8999999732 345667789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|-.- . ...+++|.+||+.+.
T Consensus 211 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDVgi 238 (301)
T 1a4i_A 211 ILVVATGQPEMV---------K-----------GEWIKPGAIVIDCGI 238 (301)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECCC
T ss_pred EEEECCCCcccC---------C-----------HHHcCCCcEEEEccC
Confidence 999999876311 1 134678999998654
No 345
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.66 E-value=0.004 Score=63.45 Aligned_cols=42 Identities=24% Similarity=0.388 Sum_probs=36.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCC---CeEEEEeCCHHHHHHHHc
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPS---IEVAVVDISVPRINAWNS 44 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G---~~V~~~D~~~~~v~~l~~ 44 (480)
||||.|+|+|.+|..++..|++. | .+|+++|+++++.+++.+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~ 45 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQ 45 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHH
Confidence 78999999999999999999987 6 389999999999887654
No 346
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.63 E-value=0.0046 Score=58.62 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=30.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~ 36 (480)
++|.|||+|.+|..+|..|+.. |. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCCC
Confidence 4799999999999999999998 76 899999987
No 347
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.63 E-value=0.0027 Score=62.70 Aligned_cols=101 Identities=11% Similarity=0.065 Sum_probs=73.7
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+ ..-...+++.|...|.+|.+||+....... ....
T Consensus 137 ~l~g~tvGIIGl----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------------------~~~~ 182 (324)
T 3hg7_A 137 GLKGRTLLILGT----------GSIGQHIAHTGKHFGMKVLGVSRSGRERAG------------------------FDQV 182 (324)
T ss_dssp CSTTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCCCTT------------------------CSEE
T ss_pred ccccceEEEEEE----------CHHHHHHHHHHHhCCCEEEEEcCChHHhhh------------------------hhcc
Confidence 468999999998 457899999999999999999987533210 0112
Q ss_pred EEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 401 IVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
....++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.|.+.+
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL 240 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDL 240 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHH
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHH
Confidence 2246889999999999999885 34444322345677888889999965 6675543
No 348
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.63 E-value=0.0056 Score=63.80 Aligned_cols=116 Identities=14% Similarity=0.235 Sum_probs=80.8
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhH-HHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEH-IQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.++.++|+|+|+. +....++..|.+.|.+|.+||......+ +.... . -.+
T Consensus 12 ~~~~~~IgvIGlG----------~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~-----------------~--~~g 62 (480)
T 2zyd_A 12 HMSKQQIGVVGMA----------VMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN-----------------P--GKK 62 (480)
T ss_dssp ---CBSEEEECCS----------HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS-----------------T--TSC
T ss_pred ccCCCeEEEEccH----------HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC-----------------C--CCC
Confidence 3467899999985 4899999999999999999998543321 11110 0 025
Q ss_pred eEEecChhhhccc---CcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEec
Q 011650 400 VIVASDAYEATKD---SHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSIG 466 (480)
Q Consensus 400 ~~~~~~~~~a~~~---~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG 466 (480)
+....++.+++++ +|+|+++++.+ ..++. .+++...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 63 i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~v-l~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~p 138 (480)
T 2zyd_A 63 LVPYYTVKEFVESLETPRRILLMVKAGAGTDAA-IDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTG 138 (480)
T ss_dssp EEECSSHHHHHHTBCSSCEEEECSCSSSHHHHH-HHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHH-HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCc
Confidence 6777889998887 99999999985 45542 346666776666999999987532 2334588886654
No 349
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.62 E-value=0.0016 Score=63.94 Aligned_cols=73 Identities=18% Similarity=0.169 Sum_probs=49.9
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEE-E--e--cCHHHH
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLF-F--S--TDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~-~--t--~d~~~a 75 (480)
.++.|||.|. +|.++|..|... |.+|+++|++..+.-..... +... ....+ + + .++++.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~--gAtVtv~nR~~~~l~~ra~~---la~~----------~~~~t~~~~t~~~~L~e~ 242 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGES---LKLN----------KHHVEDLGEYSEDLLKKC 242 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCC---SSCC----------CCEEEEEEECCHHHHHHH
T ss_pred CEEEEECCCcchHHHHHHHHHHC--CCEEEEEeCchHHHHhHHHH---Hhhh----------cccccccccccHhHHHHH
Confidence 4799999996 599999999988 88999999974332111110 0000 00111 1 2 578888
Q ss_pred hhcCCEEEEEccCC
Q 011650 76 VREANIVFVSVNTP 89 (480)
Q Consensus 76 ~~~aDvVii~Vptp 89 (480)
+..||+||.+++.|
T Consensus 243 l~~ADIVIsAtg~p 256 (320)
T 1edz_A 243 SLDSDVVITGVPSE 256 (320)
T ss_dssp HHHCSEEEECCCCT
T ss_pred hccCCEEEECCCCC
Confidence 99999999999876
No 350
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.61 E-value=0.0015 Score=62.79 Aligned_cols=102 Identities=7% Similarity=0.077 Sum_probs=65.1
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-h-cC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-R-EA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~-~a 79 (480)
++|.|+|+|.+|.++|..|++. |.+|++++|++++.+++.+.. .. .+.+.. .++++ + + .+
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~------------~~--~~~~~~-~~~~~-~~~~~~ 181 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERF------------QP--YGNIQA-VSMDS-IPLQTY 181 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHH------------GG--GSCEEE-EEGGG-CCCSCC
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc------------cc--cCCeEE-eeHHH-hccCCC
Confidence 5799999999999999999998 899999999999888776410 00 012322 23343 4 3 89
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHH
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||-|+|.+...+ .+++. . ..++++.+|++.++.|...+..
T Consensus 182 DivIn~t~~~~~~~------~~~i~------~---~~l~~~~~v~D~~y~p~~~t~l 223 (272)
T 1p77_A 182 DLVINATSAGLSGG------TASVD------A---EILKLGSAFYDMQYAKGTDTPF 223 (272)
T ss_dssp SEEEECCCC-------------CCC------H---HHHHHCSCEEESCCCTTSCCHH
T ss_pred CEEEECCCCCCCCC------CCCCC------H---HHcCCCCEEEEeeCCCCcCCHH
Confidence 99999988643210 01110 0 1123567888888876652443
No 351
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.61 E-value=0.012 Score=60.05 Aligned_cols=120 Identities=13% Similarity=0.125 Sum_probs=82.5
Q ss_pred HHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCC
Q 011650 314 VVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTS 393 (480)
Q Consensus 314 ~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (480)
+.+..+..+.+++|+|+|+. .-...+++.|...|++|.+|||..........
T Consensus 201 i~ratg~~L~GktVgIiG~G----------~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~------------------ 252 (436)
T 3h9u_A 201 IKRATDVMIAGKTACVCGYG----------DVGKGCAAALRGFGARVVVTEVDPINALQAAM------------------ 252 (436)
T ss_dssp HHHHHCCCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------------------
T ss_pred HHHhcCCcccCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCChhhhHHHHH------------------
Confidence 33444667899999999953 36889999999999999999996432211111
Q ss_pred CCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC---CChHHHhhcCcEEEEecCCC
Q 011650 394 PSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI---LDVEKLRKIGFIVYSIGKPL 469 (480)
Q Consensus 394 ~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~~g~~y~~iG~~~ 469 (480)
.++.+ .+++++++++|++++.+....+ ++. +..+.|++.++|++.-+- +|.+.+.+......++-...
T Consensus 253 ----~G~~~-~sL~eal~~ADVVilt~gt~~i--I~~-e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~v 323 (436)
T 3h9u_A 253 ----EGYQV-LLVEDVVEEAHIFVTTTGNDDI--ITS-EHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQV 323 (436)
T ss_dssp ----TTCEE-CCHHHHTTTCSEEEECSSCSCS--BCT-TTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTE
T ss_pred ----hCCee-cCHHHHHhhCCEEEECCCCcCc--cCH-HHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCc
Confidence 12333 4899999999999986654443 332 345678888899998652 56677776666666664333
No 352
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.61 E-value=0.0062 Score=59.02 Aligned_cols=72 Identities=22% Similarity=0.373 Sum_probs=54.4
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHH--HHhhc
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVE--KHVRE 78 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~--~a~~~ 78 (480)
.++.|||.|. +|.++|..|... |.+|+++++.. .+++ +.++.
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~~~~T---------------------------------~~l~l~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE--NATVTIVHSGT---------------------------------STEDMIDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTS---------------------------------CHHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCC---------------------------------CCchhhhhhcc
Confidence 4799999876 899999999998 89999998621 1233 56899
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
||+||.+++.|..- . ...++++++||+.++
T Consensus 211 ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYV---------K-----------GEWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCB---------C-----------GGGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCC---------c-----------HHhcCCCcEEEEEec
Confidence 99999999876321 1 134688999987543
No 353
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.60 E-value=0.012 Score=56.51 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=51.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|.|||+|.+|.+++..|++. |. +|++++|+.++.+++.+.. + ..+..++. +.++|
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~--G~~~i~v~nRt~~ka~~la~~~-----------------~-~~~~~~~~--~~~~D 177 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALY-----------------G-YAYINSLE--NQQAD 177 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHH-----------------T-CEEESCCT--TCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc-----------------C-Cccchhhh--cccCC
Confidence 4799999999999999999998 76 8999999999988776410 0 12222322 46899
Q ss_pred EEEEEccCCC
Q 011650 81 IVFVSVNTPT 90 (480)
Q Consensus 81 vVii~Vptp~ 90 (480)
+||-|+|.+.
T Consensus 178 ivInaTp~gm 187 (271)
T 1npy_A 178 ILVNVTSIGM 187 (271)
T ss_dssp EEEECSSTTC
T ss_pred EEEECCCCCc
Confidence 9999988654
No 354
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.59 E-value=0.0052 Score=60.27 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=78.9
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC-eEEEECCCC--ChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKA-RLSIYDPQV--PQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~-~V~~~DP~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
..+|+|+|+.. ....+++.|.+.|+ +|.+||+.. ...+.... .++
T Consensus 24 ~~~I~iIG~G~----------mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~----------------------~g~ 71 (312)
T 3qsg_A 24 AMKLGFIGFGE----------AASAIASGLRQAGAIDMAAYDAASAESWRPRAEE----------------------LGV 71 (312)
T ss_dssp -CEEEEECCSH----------HHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH----------------------TTC
T ss_pred CCEEEEECccH----------HHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH----------------------CCC
Confidence 35899999855 88999999999999 999999853 22111111 245
Q ss_pred EEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChH------HHhhc--CcEEEE
Q 011650 401 IVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVE------KLRKI--GFIVYS 464 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~--g~~y~~ 464 (480)
...+++.++++++|+|+++++-+...+ -.+.+...+++..+|+|...+.... .+.+. |..|..
T Consensus 72 ~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 72 SCKASVAEVAGECDVIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp EECSCHHHHHHHCSEEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEeCCHHHHHhcCCEEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 677899999999999999998877554 2456777777777999998877532 23344 777754
No 355
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.59 E-value=0.0032 Score=60.48 Aligned_cols=100 Identities=11% Similarity=0.096 Sum_probs=66.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-hcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-REAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~aD 80 (480)
+++.|+|+|.+|.++|..|++. |.+|+++++++++.+.+.+.... .+.+.. .+.++.. ..+|
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~--------------~~~~~~-~~~~~~~~~~~D 182 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAH--------------TGSIQA-LSMDELEGHEFD 182 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGG--------------GSSEEE-CCSGGGTTCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhc--------------cCCeeE-ecHHHhccCCCC
Confidence 4799999999999999999998 89999999999988777642100 012322 2333322 4899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||-|+|.+...+ .+++. ...++++.+|++.++.|..|
T Consensus 183 ivVn~t~~~~~~~------~~~i~---------~~~l~~~~~v~D~~y~p~~t 220 (271)
T 1nyt_A 183 LIINATSSGISGD------IPAIP---------SSLIHPGIYCYDMFYQKGKT 220 (271)
T ss_dssp EEEECCSCGGGTC------CCCCC---------GGGCCTTCEEEESCCCSSCC
T ss_pred EEEECCCCCCCCC------CCCCC---------HHHcCCCCEEEEeccCCcCC
Confidence 9999987643210 01110 12356788899988876443
No 356
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.59 E-value=0.0037 Score=60.80 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=74.3
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....++..|.+.|.+|.+||+.....+.... .++...+
T Consensus 4 ~~I~iiG~G~----------mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----------------------~g~~~~~ 51 (302)
T 2h78_A 4 KQIAFIGLGH----------MGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----------------------AGASAAR 51 (302)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSSHHHHHHHHH----------------------TTCEECS
T ss_pred CEEEEEeecH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------CCCeEcC
Confidence 5899999854 8999999999999999999986433221111 2456778
Q ss_pred ChhhhcccCcEEEEeecCcc-cccccHH---HHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011650 405 DAYEATKDSHGVCILTEWDE-FKNLDYQ---KIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~-~~~~~~~---~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+. .++. .. .+...+++..+|+|..+..... .+.+.|..|..
T Consensus 52 ~~~~~~~~aDvvi~~vp~~~~~~~v-~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 52 SARDAVQGADVVISMLPASQHVEGL-YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp SHHHHHTTCSEEEECCSCHHHHHHH-HHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHhCCCeEEEECCCHHHHHHH-HcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 99999999999999997553 2221 11 3344566667999988776532 22344777754
No 357
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.57 E-value=0.0044 Score=60.89 Aligned_cols=103 Identities=10% Similarity=0.052 Sum_probs=75.0
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+||+.....+ . + ..
T Consensus 135 ~~l~g~tvGIiG~G----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~--~-~---------------------~~ 180 (315)
T 3pp8_A 135 YTREEFSVGIMGAG----------VLGAKVAESLQAWGFPLRCWSRSRKSWP--G-V---------------------ES 180 (315)
T ss_dssp CCSTTCCEEEECCS----------HHHHHHHHHHHTTTCCEEEEESSCCCCT--T-C---------------------EE
T ss_pred CCcCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEEcCCchhhh--h-h---------------------hh
Confidence 46789999999974 4788999999999999999998654211 0 0 00
Q ss_pred eEEecChhhhcccCcEEEEeecC-cccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEW-DEFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
..-..++++.++.+|+|+++++. ++-+++--.+....|++.+++||+-+ +.|.+.+.
T Consensus 181 ~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~ 240 (315)
T 3pp8_A 181 YVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLL 240 (315)
T ss_dssp EESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHH
T ss_pred hcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHH
Confidence 11125788999999999999885 45555433566788988889999865 66765443
No 358
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.57 E-value=0.0032 Score=54.62 Aligned_cols=107 Identities=14% Similarity=0.125 Sum_probs=73.0
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.++|+|+|++-++ ++.+..+++.|.+.|++|...||....+++ .++..+
T Consensus 13 p~~IavIGas~~~------g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-------------------------~G~~~~ 61 (145)
T 2duw_A 13 TRTIALVGASDKP------DRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-------------------------LGQQGY 61 (145)
T ss_dssp CCCEEEESCCSCT------TSHHHHHHHHHHHHTCCEEEECSSSTTSEE-------------------------TTEECC
T ss_pred CCEEEEECcCCCC------CChHHHHHHHHHHCCCEEEEeCCccccccc-------------------------CCeecc
Confidence 5689999998776 468889999999999999999997521111 235566
Q ss_pred cChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChH---HHhhcCcEEEE
Q 011650 404 SDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVE---KLRKIGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y~~ 464 (480)
.|+.+..+..|+++|+++-+.-.+ -..++.+. ....++++. +.+..+ ..++.|++|.|
T Consensus 62 ~sl~el~~~~Dlvii~vp~~~v~~-v~~~~~~~-g~~~i~i~~-~~~~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 62 ATLADVPEKVDMVDVFRNSEAAWG-VAQEAIAI-GAKTLWLQL-GVINEQAAVLAREAGLSVVM 122 (145)
T ss_dssp SSTTTCSSCCSEEECCSCSTHHHH-HHHHHHHH-TCCEEECCT-TCCCHHHHHHHHTTTCEEEC
T ss_pred CCHHHcCCCCCEEEEEeCHHHHHH-HHHHHHHc-CCCEEEEcC-ChHHHHHHHHHHHcCCEEEc
Confidence 778887788999999998433222 22334442 334577776 444543 34467999865
No 359
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.55 E-value=0.034 Score=53.85 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=65.9
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|+|+ |.||..++..+.+. |++ .++.+++.+. +. + ..++.+..+++++.. .
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~----~-----------i~G~~vy~sl~el~~~~~ 64 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY--GTK-IVAGVTPGKG-----GM----E-----------VLGVPVYDTVKEAVAHHE 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC----E-----------ETTEEEESSHHHHHHHSC
T ss_pred CEEEEECCCCCHHHHHHHHHHHc--CCe-EEEEECCCCC-----Cc----e-----------ECCEEeeCCHHHHhhcCC
Confidence 58999998 99999999999887 888 4455555321 10 0 024677888888777 8
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
+|++++++|.+ ...++++...+. .-..+|+..+.++....+++.+..++.+
T Consensus 65 ~Dv~Ii~vp~~---------------~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~a~~~g 115 (288)
T 1oi7_A 65 VDASIIFVPAP---------------AAADAALEAAHA-GIPLIVLITEGIPTLDMVRAVEEIKALG 115 (288)
T ss_dssp CSEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 99999998742 234444444442 2233454444444433445666655543
No 360
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.55 E-value=0.0054 Score=63.02 Aligned_cols=66 Identities=24% Similarity=0.307 Sum_probs=48.1
Q ss_pred eEEEECCChhHHHHHHHHHHc--------CCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHH
Q 011650 3 KICCIGAGYVGGPTMAVIALK--------CPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVE 73 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~--------~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (480)
||+|||+|.||..++..|.++ +++.+|. ++|+++++.+.+.. ...+++|++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------------------~~~~~~d~~ 71 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------------------GLPLTTNPF 71 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------------------TCCEESCTH
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------------------cCcccCCHH
Confidence 699999999999998777531 1355655 57898887665421 134578888
Q ss_pred HHhh--cCCEEEEEccC
Q 011650 74 KHVR--EANIVFVSVNT 88 (480)
Q Consensus 74 ~a~~--~aDvVii~Vpt 88 (480)
+.+. +.|+|++|+|+
T Consensus 72 ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 72 DVVDDPEIDIVVELIGG 88 (444)
T ss_dssp HHHTCTTCCEEEECCCS
T ss_pred HHhcCCCCCEEEEcCCC
Confidence 8775 57999999885
No 361
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.54 E-value=0.0079 Score=57.87 Aligned_cols=71 Identities=25% Similarity=0.391 Sum_probs=54.6
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|++++.. +.++++.++.||
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 204 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRF---------------------------------TKNLRHHVENAD 204 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSS---------------------------------CSCHHHHHHHCS
T ss_pred CEEEEECCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhccCC
Confidence 4799999996 799999999988 8999999632 245667789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-- . ...+++|.+||+.+
T Consensus 205 IVI~Avg~p~lI---------~-----------~~~vk~GavVIDVg 231 (288)
T 1b0a_A 205 LLIVAVGKPGFI---------P-----------GDWIKEGAIVIDVG 231 (288)
T ss_dssp EEEECSCCTTCB---------C-----------TTTSCTTCEEEECC
T ss_pred EEEECCCCcCcC---------C-----------HHHcCCCcEEEEcc
Confidence 999999876311 0 12357899988743
No 362
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.53 E-value=0.0037 Score=62.91 Aligned_cols=100 Identities=13% Similarity=0.139 Sum_probs=73.7
Q ss_pred cCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcC
Q 011650 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTIN 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+. .-...+++.|...|.+|.+|||..... . .
T Consensus 114 g~~l~gktvGIIGlG----------~IG~~vA~~l~a~G~~V~~~d~~~~~~---~-----------------------~ 157 (381)
T 3oet_A 114 GFSLRDRTIGIVGVG----------NVGSRLQTRLEALGIRTLLCDPPRAAR---G-----------------------D 157 (381)
T ss_dssp TCCGGGCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECHHHHHT---T-----------------------C
T ss_pred CCccCCCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEECCChHHh---c-----------------------c
Confidence 457889999999983 478999999999999999999942111 0 0
Q ss_pred ceEEecChhhhcccCcEEEEeecCc-c----ccc-ccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 399 QVIVASDAYEATKDSHGVCILTEWD-E----FKN-LDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 399 ~~~~~~~~~~a~~~~d~~vi~~~~~-~----~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.. ...++++.++.+|+|+++++.. + -++ ++ .+..+.|++.+++||+-+ +.|.+.+.
T Consensus 158 ~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~aRG~vvde~aL~ 221 (381)
T 3oet_A 158 EG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD-ETLIRRLKPGAILINACRGPVVDNAALL 221 (381)
T ss_dssp CS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC-HHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred Cc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhcC-HHHHhcCCCCcEEEECCCCcccCHHHHH
Confidence 01 2357899999999999999864 2 233 44 456678888889999865 66765443
No 363
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.52 E-value=0.0075 Score=58.90 Aligned_cols=111 Identities=8% Similarity=0.011 Sum_probs=76.8
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceE
Q 011650 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVI 401 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
....+|+|+|+.. ....+++.|.+.|++|.+||+.....+.... .++.
T Consensus 7 ~~~~~IgiIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~ 54 (306)
T 3l6d_A 7 SFEFDVSVIGLGA----------MGTIMAQVLLKQGKRVAIWNRSPGKAAALVA----------------------AGAH 54 (306)
T ss_dssp CCSCSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHH----------------------HTCE
T ss_pred cCCCeEEEECCCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------------------CCCe
Confidence 3457899999854 8899999999999999999986433221111 1356
Q ss_pred EecChhhhcccCcEEEEeecCcc-cccc-cHHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011650 402 VASDAYEATKDSHGVCILTEWDE-FKNL-DYQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSI 465 (480)
Q Consensus 402 ~~~~~~~a~~~~d~~vi~~~~~~-~~~~-~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
...++.++++++|+|+++++.+. .++. ..+.+.. +.+..+|+|+...-... .+.+.|..|..-
T Consensus 55 ~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 55 LCESVKAALSASPATIFVLLDNHATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp ECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 67899999999999999998764 3331 1013333 34556999998876532 234568888653
No 364
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.49 E-value=0.014 Score=56.12 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=67.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh-hcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV-REA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~a 79 (480)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+... .+.+.+. ++++.- .++
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~---------------~~~~~~~-~~~~l~~~~~ 182 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA--GPSELVIANRDMAKALALRNELD---------------HSRLRIS-RYEALEGQSF 182 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHC---------------CTTEEEE-CSGGGTTCCC
T ss_pred CEEEEECccHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhc---------------cCCeeEe-eHHHhcccCC
Confidence 4799999999999999999998 85 99999999999888764210 0123322 222311 689
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHH
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||-|+|.....+ .+.+. ...++++.+|++....|.. |..+
T Consensus 183 DivInaTp~gm~~~------~~~i~---------~~~l~~~~~V~DlvY~P~~-T~ll 224 (272)
T 3pwz_A 183 DIVVNATSASLTAD------LPPLP---------ADVLGEAALAYELAYGKGL-TPFL 224 (272)
T ss_dssp SEEEECSSGGGGTC------CCCCC---------GGGGTTCSEEEESSCSCCS-CHHH
T ss_pred CEEEECCCCCCCCC------CCCCC---------HHHhCcCCEEEEeecCCCC-CHHH
Confidence 99999987543210 11111 1245678888887766544 4443
No 365
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.46 E-value=0.0054 Score=59.51 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=48.4
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||+|.|.| .|++|..++..|.++ |++|+++++++...+ +. + ..+. .+.+. ..++.++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~-~-~~~~------------~~Dl~-~~~~~~~~~~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN-D-YEYR------------VSDYT-LEDLINQLNDV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC-------C-CEEE------------ECCCC-HHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC-c-eEEE------------Ecccc-HHHHHHhhcCC
Confidence 46899999 699999999999998 999999999854443 33 1 1110 12233 34456667899
Q ss_pred CEEEEEccC
Q 011650 80 NIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-|...
T Consensus 64 d~Vih~a~~ 72 (311)
T 3m2p_A 64 DAVVHLAAT 72 (311)
T ss_dssp SEEEECCCC
T ss_pred CEEEEcccc
Confidence 999988753
No 366
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.46 E-value=0.0074 Score=59.82 Aligned_cols=101 Identities=10% Similarity=0.084 Sum_probs=74.6
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||..... . ..+ +
T Consensus 143 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~-----------------------~ 187 (333)
T 1j4a_A 143 EVRDQVVGVVGTG----------HIGQVFMQIMEGFGAKVITYDIFRNPE-L-EKK-----------------------G 187 (333)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHH-H-HHT-----------------------T
T ss_pred cCCCCEEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCcchh-H-Hhh-----------------------C
Confidence 4678999999974 478899999999999999999987654 2 111 1
Q ss_pred EEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 401 IVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.+.+++++.++.+|+|+++++.. +.+++--+.....|++.+++||+-+ +.+.+.+.
T Consensus 188 ~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~ 246 (333)
T 1j4a_A 188 YYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVI 246 (333)
T ss_dssp CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 23347889999999999999874 4555322456678888889999865 56654443
No 367
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.44 E-value=0.0097 Score=58.45 Aligned_cols=108 Identities=19% Similarity=0.119 Sum_probs=76.4
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCC-CeEEEECCCCC----hhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDK-ARLSIYDPQVP----QEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g-~~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+|+|+|+.+ -...++..|.+.| .+|.+||+... .++....+. ..+
T Consensus 25 m~IgvIG~G~----------mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~-------------------~~g 75 (317)
T 4ezb_A 25 TTIAFIGFGE----------AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAA-------------------ELG 75 (317)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHH-------------------HTT
T ss_pred CeEEEECccH----------HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHH-------------------HCC
Confidence 5899999865 8999999999999 99999998641 011111111 012
Q ss_pred eEEec-ChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCCh------HHHhhcCcEEEE
Q 011650 400 VIVAS-DAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDV------EKLRKIGFIVYS 464 (480)
Q Consensus 400 ~~~~~-~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~------~~~~~~g~~y~~ 464 (480)
+ .+ ++.++++++|+|+++++-+...+ ..+.+...+++..+|+|..++... +.+.+.|..|..
T Consensus 76 ~--~~~s~~e~~~~aDvVi~avp~~~~~~-~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 76 V--EPLDDVAGIACADVVLSLVVGAATKA-VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp C--EEESSGGGGGGCSEEEECCCGGGHHH-HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred C--CCCCHHHHHhcCCEEEEecCCHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 3 45 78899999999999998877554 235666777777799999876643 233455777754
No 368
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.44 E-value=0.013 Score=56.31 Aligned_cols=72 Identities=25% Similarity=0.385 Sum_probs=54.8
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|++++.. |.++++.++.||
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~--gAtVtv~hs~---------------------------------T~~L~~~~~~AD 206 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLG--GCTVTVTHRF---------------------------------TRDLADHVSRAD 206 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------CcCHHHHhccCC
Confidence 4799999765 899999999998 8999998642 235667789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecC
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|..- . ...+++|.+||+.+.
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 234 (286)
T 4a5o_A 207 LVVVAAGKPGLV---------K-----------GEWIKEGAIVIDVGI 234 (286)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECCS
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCeEEEEecc
Confidence 999999876211 1 145688999987543
No 369
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.44 E-value=0.012 Score=56.68 Aligned_cols=71 Identities=25% Similarity=0.369 Sum_probs=54.5
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|+++++. |.++++.++.||
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~--gAtVtv~h~~---------------------------------t~~L~~~~~~AD 205 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNA--GATVSVCHIK---------------------------------TKDLSLYTRQAD 205 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhhcCC
Confidence 4799999876 799999999998 8999998742 235667789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|..- . ...+++|.+||+.+
T Consensus 206 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDVg 232 (285)
T 3p2o_A 206 LIIVAAGCVNLL---------R-----------SDMVKEGVIVVDVG 232 (285)
T ss_dssp EEEECSSCTTCB---------C-----------GGGSCTTEEEEECC
T ss_pred EEEECCCCCCcC---------C-----------HHHcCCCeEEEEec
Confidence 999999865211 1 14568899888743
No 370
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.42 E-value=0.013 Score=56.35 Aligned_cols=71 Identities=25% Similarity=0.406 Sum_probs=54.3
Q ss_pred ceEEEECCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|++.++. |.++++.++.||
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 206 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA--KATVTTCHRF---------------------------------TTDLKSHTTKAD 206 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHhcccCC
Confidence 4799999876 799999999998 8899998642 235667789999
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|..- . ...+++|.+||+.+
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvg 233 (285)
T 3l07_A 207 ILIVAVGKPNFI---------T-----------ADMVKEGAVVIDVG 233 (285)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECC
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCcEEEEec
Confidence 999999866211 1 13568899988743
No 371
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.42 E-value=0.008 Score=59.60 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=31.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEE-eC--CHHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI--SVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~--~~~~v~~l~ 43 (480)
+||||+|.|++|.-++..|..+ ++.+|.++ |. +.+....+-
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-p~vevvaI~d~~~~~~~~~~ll 47 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-EDVELVAVNDPFITTDYMTYMF 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCC-CCeEEEEEECCCCCHHHHHHhh
Confidence 3999999999999999998875 56787765 42 556555543
No 372
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.011 Score=61.90 Aligned_cols=114 Identities=15% Similarity=0.186 Sum_probs=80.4
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhh-hhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRD-LQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
..+|+|+|+.. ....++..|.++|++|.+||......+.... . .+ -.++..
T Consensus 10 ~~~IgvIGlG~----------MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~--------~~----------~~gi~~ 61 (497)
T 2p4q_A 10 SADFGLIGLAV----------MGQNLILNAADHGFTVCAYNRTQSKVDHFLANE--------AK----------GKSIIG 61 (497)
T ss_dssp CCSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTT--------TT----------TSSEEC
T ss_pred CCCEEEEeeHH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccc--------cc----------CCCeEE
Confidence 35899999854 8999999999999999999986543221111 0 00 034666
Q ss_pred ecChhhhccc---CcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEec
Q 011650 403 ASDAYEATKD---SHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSIG 466 (480)
Q Consensus 403 ~~~~~~a~~~---~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG 466 (480)
+.++.+++++ +|+|+++++.+ ..++. .+++...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 62 ~~s~~e~v~~l~~aDvVil~Vp~~~~v~~v-l~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 62 ATSIEDFISKLKRPRKVMLLVKAGAPVDAL-INQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp CSSHHHHHHTSCSSCEEEECCCSSHHHHHH-HHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eCCHHHHHhcCCCCCEEEEEcCChHHHHHH-HHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCC
Confidence 7889888877 99999999985 44442 356666776666999999987532 2334588887654
No 373
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.35 E-value=0.0027 Score=60.94 Aligned_cols=74 Identities=9% Similarity=0.082 Sum_probs=50.2
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.| .|.+|..++..|++. +|++|+++++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~------------~D~~d~~~l~~~~~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQ------------LDYFNQESMVEAFKGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEE------------cCCCCHHHHHHHHhCCC
Confidence 7899999 599999999998874 379999999998765544332111110 11111123455678999
Q ss_pred EEEEEccC
Q 011650 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||.|.+.
T Consensus 68 ~vi~~a~~ 75 (289)
T 3e48_A 68 TVVFIPSI 75 (289)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998753
No 374
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.34 E-value=0.0098 Score=57.50 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=72.9
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEecC
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+.. -+..+++.|.+.|.+|.+||+.....+.... .++....+
T Consensus 7 ~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~~~ 54 (299)
T 1vpd_A 7 KVGFIGLGI----------MGKPMSKNLLKAGYSLVVSDRNPEAIADVIA----------------------AGAETAST 54 (299)
T ss_dssp EEEEECCST----------THHHHHHHHHHTTCEEEEECSCHHHHHHHHH----------------------TTCEECSS
T ss_pred eEEEECchH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------CCCeecCC
Confidence 899999743 7888999999999999999986432221111 13556678
Q ss_pred hhhhcccCcEEEEeecCcc-cccccH--HHHHhhcCCCCEEEEcCCCCCh--HH----HhhcCcEEEE
Q 011650 406 AYEATKDSHGVCILTEWDE-FKNLDY--QKIYNNMQKPAFVFDGRNILDV--EK----LRKIGFIVYS 464 (480)
Q Consensus 406 ~~~a~~~~d~~vi~~~~~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~~~--~~----~~~~g~~y~~ 464 (480)
+.++++++|+|+++++.+. ++..-. +.+...+++..+|+|..+.... +. +.+.|+.|..
T Consensus 55 ~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 55 AKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD 122 (299)
T ss_dssp HHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 8899999999999998654 332110 2345566666799999887642 22 2334777754
No 375
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.32 E-value=0.00076 Score=62.43 Aligned_cols=68 Identities=15% Similarity=0.211 Sum_probs=46.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-cC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-EA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~a 79 (480)
++|+|||+|.+|..++..+.... |++++ ++|.|+++......+ . .+...+++++.++ +.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~g-v-----------------~V~~~~dl~ell~~~I 141 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRG-G-----------------VIEHVDLLPQRVPGRI 141 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETT-E-----------------EEEEGGGHHHHSTTTC
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcC-C-----------------eeecHHhHHHHHHcCC
Confidence 57999999999999998643333 67765 479988765432211 0 1233567777665 58
Q ss_pred CEEEEEccC
Q 011650 80 NIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|++++|+|+
T Consensus 142 D~ViIA~Ps 150 (211)
T 2dt5_A 142 EIALLTVPR 150 (211)
T ss_dssp CEEEECSCH
T ss_pred CEEEEeCCc
Confidence 999999985
No 376
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.31 E-value=0.018 Score=60.10 Aligned_cols=117 Identities=20% Similarity=0.239 Sum_probs=69.5
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEEEEeCCHH-HHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVP-RINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~-~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+++|.|||+|..|.+ +|..|.++ |++|+++|..+. ..+.|.+...++ ..-.+.+. +.+
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~~-----------------~~g~~~~~-~~~ 81 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNSVTQHLTALGAQI-----------------YFHHRPEN-VLD 81 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCEE-----------------ESSCCGGG-GTT
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC--CCeEEEEECCCCHHHHHHHHCCCEE-----------------ECCCCHHH-cCC
Confidence 368999999999996 89999998 999999997643 334444322211 11123333 678
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHH-------HHHHHhhCCCCcEEEEecCCCcccHHH-HHHHHHhhc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESA-------ARMIADVSKSDKIVVEKSTVPVKTAEA-IEKILMHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~-------~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||++-.-|.+ +|.+...++. .+-+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 82 ~d~vV~Spgi~~~--------~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 82 ASVVVVSTAISAD--------NPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp CSEEEECTTSCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCC--------CHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 9999887332221 2322211110 112333444445777777776666655 567777654
No 377
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.31 E-value=0.0061 Score=57.49 Aligned_cols=99 Identities=15% Similarity=0.036 Sum_probs=65.6
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChh--H-H--------HhhhhcccCCCCCCCCC
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQE--H-I--------QRDLQMNKFDWDHPIHL 389 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~--~-~--------~~~~~~~~~~~~~~~~~ 389 (480)
.+..++|+|+|+. +....++..|.+.|.+|.+||...... . . ...+.
T Consensus 16 ~~~~~kIgiIG~G----------~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------------ 73 (245)
T 3dtt_A 16 YFQGMKIAVLGTG----------TVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWL------------ 73 (245)
T ss_dssp ---CCEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHG------------
T ss_pred ccCCCeEEEECCC----------HHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHH------------
Confidence 5678999999974 488999999999999999999853320 0 0 01110
Q ss_pred CCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHH-HhhcCCCCEEEEcCCC
Q 011650 390 QPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKI-YNNMQKPAFVFDGRNI 449 (480)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~-~~~~~~~~~i~D~~~~ 449 (480)
.... .....++.++++++|+||++++.+...+. ..++ ...++ ..+|+|+.|-
T Consensus 74 -----~~~~-~~~~~~~~e~~~~aDvVilavp~~~~~~~-~~~i~~~~l~-g~ivi~~s~~ 126 (245)
T 3dtt_A 74 -----PEHP-HVHLAAFADVAAGAELVVNATEGASSIAA-LTAAGAENLA-GKILVDIANP 126 (245)
T ss_dssp -----GGST-TCEEEEHHHHHHHCSEEEECSCGGGHHHH-HHHHCHHHHT-TSEEEECCCC
T ss_pred -----hhcC-ceeccCHHHHHhcCCEEEEccCcHHHHHH-HHHhhhhhcC-CCEEEECCCC
Confidence 0001 12356788999999999999998876642 2234 44443 4599999963
No 378
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.29 E-value=0.011 Score=58.10 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=71.0
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|.+|.+|||...... +
T Consensus 141 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~----------------------------~ 182 (311)
T 2cuk_A 141 DLQGLTLGLVGMG----------RIGQAVAKRALAFGMRVVYHARTPKPLP----------------------------Y 182 (311)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCSSS----------------------------S
T ss_pred CCCCCEEEEEEEC----------HHHHHHHHHHHHCCCEEEEECCCCcccc----------------------------c
Confidence 5688999999974 4788999999999999999999754321 1
Q ss_pred EEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChH
Q 011650 401 IVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVE 453 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
. ..++++.++.+|+|+++++.. +.+++--++....|++..+++|+-+ +.+.+
T Consensus 183 ~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~ 237 (311)
T 2cuk_A 183 P-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTE 237 (311)
T ss_dssp C-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred c-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHH
Confidence 1 247888999999999998875 4555322355678888889999876 44543
No 379
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.22 E-value=0.0039 Score=62.10 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=27.1
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||||+|+| .|++|..+...|..+ +..+++.+...
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEECc
Confidence 36899999 699999999999875 45687776543
No 380
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.21 E-value=0.011 Score=58.46 Aligned_cols=101 Identities=15% Similarity=0.142 Sum_probs=74.3
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||..... . . ..
T Consensus 141 ~~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~ 185 (333)
T 1dxy_A 141 KELGQQTVGVMGTG----------HIGQVAIKLFKGFGAKVIAYDPYPMKG-D-H-----------------------PD 185 (333)
T ss_dssp CCGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCSS-C-C-----------------------TT
T ss_pred cCCCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCcchh-h-H-----------------------hc
Confidence 46788999999974 478899999999999999999976532 1 1 01
Q ss_pred eEEecChhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCC--CCChHHHh
Q 011650 400 VIVASDAYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
+.+ .++++.++.+|+|+++++... .+++=-+.....|++..++||+-+ +.+.+.+.
T Consensus 186 ~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~ 244 (333)
T 1dxy_A 186 FDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAML 244 (333)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHH
T ss_pred ccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 233 378899999999999998743 444322456678988889999865 56655443
No 381
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.18 E-value=0.0083 Score=60.43 Aligned_cols=99 Identities=10% Similarity=0.154 Sum_probs=72.1
Q ss_pred cCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcC
Q 011650 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTIN 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+. .-...+++.|...|++|.+|||..... ..
T Consensus 111 ~~~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~---------------------- 154 (380)
T 2o4c_A 111 GADLAERTYGVVGAG----------QVGGRLVEVLRGLGWKVLVCDPPRQAR----EP---------------------- 154 (380)
T ss_dssp TCCGGGCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECHHHHHH----ST----------------------
T ss_pred hcccCCCEEEEEeCC----------HHHHHHHHHHHHCCCEEEEEcCChhhh----cc----------------------
Confidence 456789999999973 478899999999999999999853211 11
Q ss_pred ceEEecChhhhcccCcEEEEeecCcc-----ccc-ccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 399 QVIVASDAYEATKDSHGVCILTEWDE-----FKN-LDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~~d~~vi~~~~~~-----~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
+.. ..++++.++.+|+|+++++... -++ ++ +.+.+.|++..++||+-+ +.+.+.+
T Consensus 155 g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~sRG~vvd~~aL 217 (380)
T 2o4c_A 155 DGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLD-EPRLAALRPGTWLVNASRGAVVDNQAL 217 (380)
T ss_dssp TSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC-HHHHHTSCTTEEEEECSCGGGBCHHHH
T ss_pred Ccc-cCCHHHHHHhCCEEEEeccCccccccchhhhcC-HHHHhhCCCCcEEEECCCCcccCHHHH
Confidence 011 2478899999999999987643 233 44 456788888789999866 5565433
No 382
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.16 E-value=0.011 Score=57.01 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=30.8
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|||.|.|+ |++|..++..|.++ ||+|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCC
Confidence 89999997 99999999999998 99999998864
No 383
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.15 E-value=0.026 Score=58.71 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=73.0
Q ss_pred hcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 318 ~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
.+..+.+++|+|+|+. .-...+++.|...|++|.+|||..........
T Consensus 271 ~g~~L~GktVgIIG~G----------~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~---------------------- 318 (494)
T 3d64_A 271 TDVMIAGKIAVVAGYG----------DVGKGCAQSLRGLGATVWVTEIDPICALQAAM---------------------- 318 (494)
T ss_dssp HCCCCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSCHHHHHHHHT----------------------
T ss_pred cccccCCCEEEEEccC----------HHHHHHHHHHHHCCCEEEEEeCChHhHHHHHH----------------------
Confidence 3456899999999963 37888999999999999999997643211111
Q ss_pred CceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC---CChHHH
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI---LDVEKL 455 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~ 455 (480)
.++.+ .+++++++.+|+|++++.-+.+ ++ .+..+.|++.++|+|.-+- +|.+.+
T Consensus 319 ~G~~~-~~l~ell~~aDiVi~~~~t~~l--I~-~~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 319 EGYRV-VTMEYAADKADIFVTATGNYHV--IN-HDHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp TTCEE-CCHHHHTTTCSEEEECSSSSCS--BC-HHHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred cCCEe-CCHHHHHhcCCEEEECCCcccc--cC-HHHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 12333 4789999999999999833222 44 3556789888899998653 466555
No 384
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.14 E-value=0.046 Score=56.54 Aligned_cols=104 Identities=16% Similarity=0.073 Sum_probs=74.2
Q ss_pred hcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 318 ~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
.+..+.+++|+|+|+. .-...+++.|...|++|.+|||..........
T Consensus 251 ~~~~l~GktVgIIG~G----------~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~---------------------- 298 (479)
T 1v8b_A 251 TDFLISGKIVVICGYG----------DVGKGCASSMKGLGARVYITEIDPICAIQAVM---------------------- 298 (479)
T ss_dssp HCCCCTTSEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT----------------------
T ss_pred cccccCCCEEEEEeeC----------HHHHHHHHHHHhCcCEEEEEeCChhhHHHHHH----------------------
Confidence 3457899999999963 36788899999999999999998654211111
Q ss_pred CceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC---CChHHHhh
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI---LDVEKLRK 457 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~ 457 (480)
.++.+ .+++++++.+|+|++++.-+.+ ++. +..+.|++.++|+|.-+. ++.+.+.+
T Consensus 299 ~g~~~-~~l~ell~~aDiVi~~~~t~~l--I~~-~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 299 EGFNV-VTLDEIVDKGDFFITCTGNVDV--IKL-EHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp TTCEE-CCHHHHTTTCSEEEECCSSSSS--BCH-HHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred cCCEe-cCHHHHHhcCCEEEECCChhhh--cCH-HHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 12333 4789999999999999743332 443 456779888899998763 56666554
No 385
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.12 E-value=0.0065 Score=60.74 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=26.5
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|||+|+| .|++|..++..|.++ +.++|+.+.
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~ 40 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMFELTALA 40 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEE
Confidence 6899999 899999999998875 567887774
No 386
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.10 E-value=0.028 Score=57.81 Aligned_cols=107 Identities=17% Similarity=0.225 Sum_probs=73.3
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC-------
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST------- 396 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 396 (480)
.-||+|+|+.| -.+.++..|.+.|.+|.+||-.-..-+.... + ..|+ . .++.
T Consensus 8 ~~~~~vIGlG~----------vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~-g------~~~~--~--epgl~~~~~~~ 66 (446)
T 4a7p_A 8 SVRIAMIGTGY----------VGLVSGACFSDFGHEVVCVDKDARKIELLHQ-N------VMPI--Y--EPGLDALVASN 66 (446)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCSTTHHHHTT-T------CCSS--C--CTTHHHHHHHH
T ss_pred ceEEEEEcCCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc-C------CCCc--c--CCCHHHHHHhh
Confidence 45999999988 9999999999999999999976544222111 0 0010 0 0110
Q ss_pred --cCceEEecChhhhcccCcEEEEeecCcc---cccccH-------HHHHhhcCCCCEEEEcCCCCC
Q 011650 397 --INQVIVASDAYEATKDSHGVCILTEWDE---FKNLDY-------QKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 397 --~~~~~~~~~~~~a~~~~d~~vi~~~~~~---~~~~~~-------~~~~~~~~~~~~i~D~~~~~~ 451 (480)
..++++.+++.+++++||+++++++-|. ..+.|. +.+...+++..+||+...+..
T Consensus 67 ~~~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~p 133 (446)
T 4a7p_A 67 VKAGRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPV 133 (446)
T ss_dssp HHTTCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCT
T ss_pred cccCCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Confidence 1347888999999999999999965553 223332 455666777779999886554
No 387
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.09 E-value=0.014 Score=57.74 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=73.0
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||..... . . ..+
T Consensus 143 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~~ 187 (331)
T 1xdw_A 143 EVRNCTVGVVGLG----------RIGRVAAQIFHGMGATVIGEDVFEIKG-I-E-----------------------DYC 187 (331)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCCS-C-T-----------------------TTC
T ss_pred CCCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCccHH-H-H-----------------------hcc
Confidence 4678999999973 478899999999999999999976532 1 1 012
Q ss_pred EEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCC--CCChHHH
Q 011650 401 IVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRN--ILDVEKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
.+ .++++.++.+|+|+++++.. +.+++--.+..+.|++.+++||+-+ +.+.+.+
T Consensus 188 ~~-~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL 244 (331)
T 1xdw_A 188 TQ-VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAV 244 (331)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHH
T ss_pred cc-CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHH
Confidence 33 37889999999999998863 4444322456678988889999876 5665433
No 388
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.07 E-value=0.0064 Score=58.86 Aligned_cols=108 Identities=15% Similarity=0.176 Sum_probs=66.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|+|+|.+|.++|..|++. | +|+++++++++.+.+.+.......... .+ .+.++ +..+.+..+|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~--~~------~~d~~-~~~~~~~~~Di 196 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKF--GE------EVKFS-GLDVDLDGVDI 196 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCH--HH------HEEEE-CTTCCCTTCCE
T ss_pred CEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhccccc--ce------eEEEe-eHHHhhCCCCE
Confidence 4789999999999999999998 9 999999999888776531000000000 00 12332 23344678999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCccc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+|-|+|..... ..+...+. -...++++.+|++.++.|..|
T Consensus 197 lVn~ag~~~~~-------~~~~~~~~-----~~~~l~~~~~v~Dv~y~p~~t 236 (287)
T 1nvt_A 197 IINATPIGMYP-------NIDVEPIV-----KAEKLREDMVVMDLIYNPLET 236 (287)
T ss_dssp EEECSCTTCTT-------CCSSCCSS-----CSTTCCSSSEEEECCCSSSSC
T ss_pred EEECCCCCCCC-------CCCCCCCC-----CHHHcCCCCEEEEeeeCCccC
Confidence 99998764321 00000000 013467788999888765443
No 389
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.07 E-value=0.062 Score=54.64 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=80.8
Q ss_pred HHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCC
Q 011650 312 NRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQP 391 (480)
Q Consensus 312 ~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
.-+.+..+..+.+++|+|+|.. .-...+++.|...|++|.+||+.-........
T Consensus 208 ~gi~rat~~~L~GktV~ViG~G----------~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~---------------- 261 (435)
T 3gvp_A 208 DGLKRTTDMMFGGKQVVVCGYG----------EVGKGCCAALKAMGSIVYVTEIDPICALQACM---------------- 261 (435)
T ss_dssp HHHHHHHCCCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----------------
T ss_pred HHHHHhhCceecCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH----------------
Confidence 3344444567899999999974 37889999999999999999964211111111
Q ss_pred CCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC---CChHHHhhcCcEEEEecCC
Q 011650 392 TSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI---LDVEKLRKIGFIVYSIGKP 468 (480)
Q Consensus 392 ~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~~g~~y~~iG~~ 468 (480)
.++.+ .+++++++++|+++.++..+.. ++.+ ....|++.++|++.-+- ++.+.+...++.+..+...
T Consensus 262 ------~G~~v-~~Leeal~~ADIVi~atgt~~l--I~~e-~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~ 331 (435)
T 3gvp_A 262 ------DGFRL-VKLNEVIRQVDIVITCTGNKNV--VTRE-HLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQ 331 (435)
T ss_dssp ------TTCEE-CCHHHHTTTCSEEEECSSCSCS--BCHH-HHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETT
T ss_pred ------cCCEe-ccHHHHHhcCCEEEECCCCccc--CCHH-HHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcC
Confidence 12222 4789999999999997664432 4433 45678887799998553 3444444446666666544
Q ss_pred Cc
Q 011650 469 LD 470 (480)
Q Consensus 469 ~~ 470 (480)
..
T Consensus 332 v~ 333 (435)
T 3gvp_A 332 VD 333 (435)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 390
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.03 E-value=0.019 Score=56.28 Aligned_cols=98 Identities=16% Similarity=0.104 Sum_probs=70.7
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC--eEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKA--RLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
...+|+|+|+. .-.-.++..|.+.|. +|.+||+.....+....++ .. -
T Consensus 32 ~~~kI~IIG~G----------~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G------------------~~--~ 81 (314)
T 3ggo_A 32 SMQNVLIVGVG----------FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG------------------II--D 81 (314)
T ss_dssp SCSEEEEESCS----------HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT------------------SC--S
T ss_pred CCCEEEEEeeC----------HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC------------------Cc--c
Confidence 34799999974 378889999999999 9999999654322222221 00 0
Q ss_pred EEecChhh-hcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCC
Q 011650 401 IVASDAYE-ATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 401 ~~~~~~~~-a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
...+++.+ +++++|+||++++-....+. .+++...+++..+|+|..++-.
T Consensus 82 ~~~~~~~~~~~~~aDvVilavp~~~~~~v-l~~l~~~l~~~~iv~d~~Svk~ 132 (314)
T 3ggo_A 82 EGTTSIAKVEDFSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVKG 132 (314)
T ss_dssp EEESCTTGGGGGCCSEEEECSCGGGHHHH-HHHHHHHSCTTCEEEECCSCCT
T ss_pred hhcCCHHHHhhccCCEEEEeCCHHHHHHH-HHHHhhccCCCcEEEECCCCcH
Confidence 34567888 89999999999988765542 3567777777779999877643
No 391
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.03 E-value=0.25 Score=45.78 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=30.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
++|.|||.|.+|..-+..|.+. |.+|++++.+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~ 64 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTV 64 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCC
Confidence 5799999999999999999998 99999998754
No 392
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.03 E-value=0.011 Score=56.08 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=72.3
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCe-EEEECCCCChhH-HHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKAR-LSIYDPQVPQEH-IQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~-V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+|+|+|... -+..+++.|.+.|.+ |.+||+.....+ +...+ ++
T Consensus 9 ~~m~i~iiG~G~----------mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~----------------------g~ 56 (266)
T 3d1l_A 9 EDTPIVLIGAGN----------LATNLAKALYRKGFRIVQVYSRTEESARELAQKV----------------------EA 56 (266)
T ss_dssp GGCCEEEECCSH----------HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT----------------------TC
T ss_pred CCCeEEEEcCCH----------HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc----------------------CC
Confidence 345899999743 788899999999999 999998533211 11111 34
Q ss_pred EEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHh
Q 011650 401 IVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
....+++++++++|+|+++++.+..+++ .+++...+++..+|+|+.+.++.+.+.
T Consensus 57 ~~~~~~~~~~~~~Dvvi~av~~~~~~~v-~~~l~~~~~~~~ivv~~s~~~~~~~l~ 111 (266)
T 3d1l_A 57 EYTTDLAEVNPYAKLYIVSLKDSAFAEL-LQGIVEGKREEALMVHTAGSIPMNVWE 111 (266)
T ss_dssp EEESCGGGSCSCCSEEEECCCHHHHHHH-HHHHHTTCCTTCEEEECCTTSCGGGST
T ss_pred ceeCCHHHHhcCCCEEEEecCHHHHHHH-HHHHHhhcCCCcEEEECCCCCchHHHH
Confidence 5667888889999999999998865432 345555665566999999988766554
No 393
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.02 E-value=0.0093 Score=57.60 Aligned_cols=66 Identities=6% Similarity=0.125 Sum_probs=50.7
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|+|+|.+|.+++..|++. |. +|++++|+.++.+++.+.. ......++.+ + ++|
T Consensus 123 k~vlvlGaGGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~~~------------------~~~~~~~l~~-l-~~D 180 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYGEF------------------KVISYDELSN-L-KGD 180 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCTTS------------------EEEEHHHHTT-C-CCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHhc------------------CcccHHHHHh-c-cCC
Confidence 4799999999999999999998 87 8999999999998887531 0111122333 4 899
Q ss_pred EEEEEccCC
Q 011650 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||-|+|..
T Consensus 181 ivInaTp~G 189 (282)
T 3fbt_A 181 VIINCTPKG 189 (282)
T ss_dssp EEEECSSTT
T ss_pred EEEECCccC
Confidence 999998754
No 394
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.02 E-value=0.0042 Score=62.27 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=31.2
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|||.|||.|..|+.+|..|+++ |++|+++|+++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 8999999999999999999998 99999999764
No 395
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.00 E-value=0.01 Score=58.90 Aligned_cols=92 Identities=23% Similarity=0.197 Sum_probs=67.1
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCCh-hHHHhhhhcccCCCCCCCCCCCCCCCCcCceE
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQ-EHIQRDLQMNKFDWDHPIHLQPTSPSTINQVI 401 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
++.+|+|+|+. +-+..++..|.+.|.+|.+||+.... .+....+ ++.
T Consensus 15 ~~~~I~IIG~G----------~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~----------------------G~~ 62 (338)
T 1np3_A 15 QGKKVAIIGYG----------SQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH----------------------GLK 62 (338)
T ss_dssp HTSCEEEECCS----------HHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT----------------------TCE
T ss_pred cCCEEEEECch----------HHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHC----------------------CCE
Confidence 45789999974 47889999999999999999997554 2222222 234
Q ss_pred EecChhhhcccCcEEEEeecCcccccccHH-HHHhhcCCCCEEEEcCC
Q 011650 402 VASDAYEATKDSHGVCILTEWDEFKNLDYQ-KIYNNMQKPAFVFDGRN 448 (480)
Q Consensus 402 ~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~-~~~~~~~~~~~i~D~~~ 448 (480)
.. ++.++++++|+|+++++.....++ ++ ++...+++..+|+|..+
T Consensus 63 ~~-~~~e~~~~aDvVilavp~~~~~~v-~~~~i~~~l~~~~ivi~~~g 108 (338)
T 1np3_A 63 VA-DVKTAVAAADVVMILTPDEFQGRL-YKEEIEPNLKKGATLAFAHG 108 (338)
T ss_dssp EE-CHHHHHHTCSEEEECSCHHHHHHH-HHHHTGGGCCTTCEEEESCC
T ss_pred Ec-cHHHHHhcCCEEEEeCCcHHHHHH-HHHHHHhhCCCCCEEEEcCC
Confidence 44 788899999999999998765442 22 55556766668999865
No 396
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.00 E-value=0.043 Score=53.27 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=65.6
Q ss_pred eEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--cC
Q 011650 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--EA 79 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~a 79 (480)
+|+|+|+ |.+|..++..+.+. |++ .++++|+.+. +. .+ .++.+..+++++.. .+
T Consensus 15 ~v~V~Gasg~~G~~~~~~l~~~--g~~-~V~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~~ 71 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKMLEC--GTK-IVGGVTPGKG-----GQ-NV--------------HGVPVFDTVKEAVKETDA 71 (294)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT--TCC-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHCC
T ss_pred EEEEECCCCCHHHHHHHHHHhC--CCe-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCCC
Confidence 6888898 99999999999887 888 5666665421 10 00 24677888888777 89
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++++++|.+ ...++++...+. ....+|+..+.++....+++.+..++.+
T Consensus 72 Dv~ii~vp~~---------------~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 121 (294)
T 2yv1_A 72 NASVIFVPAP---------------FAKDAVFEAIDA-GIELIVVITEHIPVHDTMEFVNYAEDVG 121 (294)
T ss_dssp CEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred CEEEEccCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 9999998742 234444444442 2223454444444433445666665543
No 397
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.99 E-value=0.025 Score=55.66 Aligned_cols=121 Identities=10% Similarity=0.072 Sum_probs=75.3
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhh-----hh-cccCCCCCCCCCCCCCCCCc
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRD-----LQ-MNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~ 397 (480)
-++|+|+|+. .....++..|.+.|++|.+||+.-...+.... +. +..... .+...+.....
T Consensus 6 ~~kI~vIGaG----------~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~---~~g~~~~~~~~ 72 (319)
T 2dpo_A 6 AGDVLIVGSG----------LVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS---LKGSLSAEEQL 72 (319)
T ss_dssp -CEEEEECCS----------HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC---CCSSSCHHHHH
T ss_pred CceEEEEeeC----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCc---cccccchHHHh
Confidence 4699999974 48889999999999999999996433211110 00 000000 00000000012
Q ss_pred CceEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCChHHHhh
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRK 457 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~ 457 (480)
.++++++++.+++++||.|+++++-+ +.+.--+.++...+++..+|++...-+....+.+
T Consensus 73 ~~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~ 133 (319)
T 2dpo_A 73 SLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT 133 (319)
T ss_dssp HTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT
T ss_pred hceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH
Confidence 34788899999999999999999753 3433334567777777777878777777665543
No 398
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.96 E-value=0.007 Score=58.45 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=48.4
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCC------HHHHHHH---HcCCCCCCCCChHHHHHHhcCCCEEEec
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDIS------VPRINAW---NSDQLPIYEPGLEEVVKQCRGKNLFFST 70 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~------~~~v~~l---~~g~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
||+|.|.|. |.+|..++..|++. |++|++++|+ +++.+.+ ......+.. +.+.-..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~~ 69 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVH------------GSIDDHA 69 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEEC------------CCTTCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEE------------eccCCHH
Confidence 468999996 99999999999998 9999999997 3443322 221111111 1111012
Q ss_pred CHHHHhhcCCEEEEEcc
Q 011650 71 DVEKHVREANIVFVSVN 87 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vp 87 (480)
++.++++++|+||.|.+
T Consensus 70 ~l~~~~~~~d~vi~~a~ 86 (308)
T 1qyc_A 70 SLVEAVKNVDVVISTVG 86 (308)
T ss_dssp HHHHHHHTCSEEEECCC
T ss_pred HHHHHHcCCCEEEECCc
Confidence 34556788999999875
No 399
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.96 E-value=0.0025 Score=61.10 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=32.9
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPR 38 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
||||.|.|+|++|..++..|.++ |++|++++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCccc
Confidence 47899999999999999999998 9999999998654
No 400
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.96 E-value=0.034 Score=53.48 Aligned_cols=118 Identities=12% Similarity=0.054 Sum_probs=74.8
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhh-----hc---ccCCCCCCCCCCCCCCC
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDL-----QM---NKFDWDHPIHLQPTSPS 395 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~ 395 (480)
-++|+|+|.. .....++..|.+.|++|.+||+.-...+..... .. .+..... .....
T Consensus 4 ~~kV~VIGaG----------~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-----~~~~~ 68 (283)
T 4e12_A 4 ITNVTVLGTG----------VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAAD-----GAAQK 68 (283)
T ss_dssp CCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTT-----THHHH
T ss_pred CCEEEEECCC----------HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCH-----HHHHH
Confidence 3689999974 388899999999999999999864332111110 00 0000000 00000
Q ss_pred CcCceEEecChhhhcccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCChHHHh
Q 011650 396 TINQVIVASDAYEATKDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLR 456 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
....++..+++.++++++|.||+++.-+ +.+..-++++...+++..+|++...-++...+.
T Consensus 69 ~~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la 130 (283)
T 4e12_A 69 ALGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLV 130 (283)
T ss_dssp HHHHCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHH
T ss_pred HHcCeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHH
Confidence 0123567789999999999999998765 233333567777777777888877777765443
No 401
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.95 E-value=0.02 Score=59.51 Aligned_cols=113 Identities=11% Similarity=0.187 Sum_probs=77.5
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhH-HHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEH-IQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
..+|+|+|+. +....++..|.+.|++|.+||+.....+ +...++ -.++..
T Consensus 5 ~~~IgvIG~G----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------------------~~gi~~ 55 (474)
T 2iz1_A 5 QANFGVVGMA----------VMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ-------------------DKNLVF 55 (474)
T ss_dssp TBSEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT-------------------TSCEEE
T ss_pred CCcEEEEeeH----------HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc-------------------CCCeEE
Confidence 3589999974 4888999999999999999998543321 111110 024667
Q ss_pred ecChhhhccc---CcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCCh--HH----HhhcCcEEEEec
Q 011650 403 ASDAYEATKD---SHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDV--EK----LRKIGFIVYSIG 466 (480)
Q Consensus 403 ~~~~~~a~~~---~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~--~~----~~~~g~~y~~iG 466 (480)
..++.+++++ +|+|+++++.+ ..++ -.+++...+++..+|+|+.+.... .+ +.+.|+.|.+.+
T Consensus 56 ~~s~~e~v~~l~~aDvVilavp~~~~v~~-vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~p 128 (474)
T 2iz1_A 56 TKTLEEFVGSLEKPRRIMLMVQAGAATDA-TIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTG 128 (474)
T ss_dssp CSSHHHHHHTBCSSCEEEECCCTTHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEE
T ss_pred eCCHHHHHhhccCCCEEEEEccCchHHHH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCC
Confidence 7889888776 99999999985 3443 234566667666699999987743 22 223477776654
No 402
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.92 E-value=0.016 Score=57.65 Aligned_cols=95 Identities=16% Similarity=0.256 Sum_probs=58.9
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEe-cCHHHHhhc
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFS-TDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t-~d~~~a~~~ 78 (480)
|.||+||| .|++|.-+...|..+ |..++..+.-....=..+. +...... ..+.+. .+.++...+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~el~~l~S~~~aG~~~~------------~~~p~~~-~~l~~~~~~~~~~~~~ 78 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAGKKLE------------EIFPSTL-ENSILSEFDPEKVSKN 78 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTTSBHH------------HHCGGGC-CCCBCBCCCHHHHHHH
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEeCcccccCChH------------HhChhhc-cCceEEeCCHHHhhcC
Confidence 56899997 599999999999986 6778877764321100111 0000000 112222 244553478
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+|++|+|+|.. +.+++.+.+ .|..||+.|+-
T Consensus 79 ~Dvvf~alp~~-------------------~s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 79 CDVLFTALPAG-------------------ASYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp CSEEEECCSTT-------------------HHHHHHTTC-CSCEEEESSST
T ss_pred CCEEEECCCcH-------------------HHHHHHHHh-CCCEEEECChh
Confidence 99999998742 345566666 78999998753
No 403
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.90 E-value=0.0044 Score=59.21 Aligned_cols=74 Identities=14% Similarity=0.242 Sum_probs=49.2
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|.|.|. |.+|..++..|++..+|++|+++++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~~~d 68 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRH------------GDYNQPESLQKAFAGVS 68 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEE------------eccCCHHHHHHHHhcCC
Confidence 68999986 999999999998753479999999988766555432111110 01100123445677899
Q ss_pred EEEEEcc
Q 011650 81 IVFVSVN 87 (480)
Q Consensus 81 vVii~Vp 87 (480)
+||-+..
T Consensus 69 ~vi~~a~ 75 (287)
T 2jl1_A 69 KLLFISG 75 (287)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998865
No 404
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.89 E-value=0.0083 Score=59.88 Aligned_cols=31 Identities=29% Similarity=0.591 Sum_probs=26.2
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+|+| .|++|.-+...|..+ +..+++.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~ 36 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-PYLELVKVS 36 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-CCcEEEEEe
Confidence 6899999 899999999988875 567887774
No 405
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.89 E-value=0.0085 Score=57.97 Aligned_cols=74 Identities=11% Similarity=0.164 Sum_probs=49.9
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCC-----HHHHHHHH---cCCCCCCCCChHHHHHHhcCCCEEEecC
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDIS-----VPRINAWN---SDQLPIYEPGLEEVVKQCRGKNLFFSTD 71 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~-----~~~v~~l~---~g~~~~~e~~l~~~~~~~~~~~l~~t~d 71 (480)
||+|.|.|. |.+|..++..|++. |++|++++|+ +++.+.+. .....+.. +.+.-..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~------------~D~~d~~~ 69 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE------------ASLDDHQR 69 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEEC------------CCSSCHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEe------------CCCCCHHH
Confidence 478999995 99999999999998 9999999998 45544332 21111111 11111123
Q ss_pred HHHHhhcCCEEEEEccC
Q 011650 72 VEKHVREANIVFVSVNT 88 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vpt 88 (480)
+.++++++|+||.|.+.
T Consensus 70 l~~~~~~~d~vi~~a~~ 86 (313)
T 1qyd_A 70 LVDALKQVDVVISALAG 86 (313)
T ss_dssp HHHHHTTCSEEEECCCC
T ss_pred HHHHHhCCCEEEECCcc
Confidence 45567899999999764
No 406
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.86 E-value=0.0059 Score=58.94 Aligned_cols=74 Identities=14% Similarity=0.124 Sum_probs=49.7
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCH-------HHHHHHH---cCCCCCCCCChHHHHHHhcCCCEEEe
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV-------PRINAWN---SDQLPIYEPGLEEVVKQCRGKNLFFS 69 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~-------~~v~~l~---~g~~~~~e~~l~~~~~~~~~~~l~~t 69 (480)
||+|.|.|. |.+|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~ 67 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLE------------GDINDH 67 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE------------CCTTCH
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE------------eCCCCH
Confidence 688999996 99999999999998 99999999986 5544332 11111100 001001
Q ss_pred cCHHHHhhcCCEEEEEccC
Q 011650 70 TDVEKHVREANIVFVSVNT 88 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vpt 88 (480)
.++.++++++|+||-|.+.
T Consensus 68 ~~l~~~~~~~d~vi~~a~~ 86 (307)
T 2gas_A 68 ETLVKAIKQVDIVICAAGR 86 (307)
T ss_dssp HHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHhCCCEEEECCcc
Confidence 2344567889999998763
No 407
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.86 E-value=0.031 Score=54.88 Aligned_cols=100 Identities=11% Similarity=0.168 Sum_probs=71.3
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCC----CeEEEECCCCC--hhHHHhhhhcccCCCCCCCCCCCCCCCCc
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDK----ARLSIYDPQVP--QEHIQRDLQMNKFDWDHPIHLQPTSPSTI 397 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g----~~V~~~DP~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
..+|+|+|+. .....++..|.+.| .+|.+||+... ..+....
T Consensus 22 ~mkI~iIG~G----------~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~---------------------- 69 (322)
T 2izz_A 22 SMSVGFIGAG----------QLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRK---------------------- 69 (322)
T ss_dssp CCCEEEESCS----------HHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHH----------------------
T ss_pred CCEEEEECCC----------HHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHH----------------------
Confidence 3479999974 48889999999999 79999998754 2111112
Q ss_pred CceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHh
Q 011650 398 NQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLR 456 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
.++.+..+..++++++|+||+++....+++. .+.+...+++..+|+|..+-++.+.+.
T Consensus 70 ~G~~~~~~~~e~~~~aDvVilav~~~~~~~v-l~~l~~~l~~~~ivvs~s~gi~~~~l~ 127 (322)
T 2izz_A 70 MGVKLTPHNKETVQHSDVLFLAVKPHIIPFI-LDEIGADIEDRHIVVSCAAGVTISSIE 127 (322)
T ss_dssp HTCEEESCHHHHHHHCSEEEECSCGGGHHHH-HHHHGGGCCTTCEEEECCTTCCHHHHH
T ss_pred cCCEEeCChHHHhccCCEEEEEeCHHHHHHH-HHHHHhhcCCCCEEEEeCCCCCHHHHH
Confidence 2356677888999999999999996544442 234555565556999998877765443
No 408
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.86 E-value=0.04 Score=54.81 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=66.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-cCC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR-EAN 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~aD 80 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++++ .++.+. -+.+.. +.++.+. .||
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~--GakVvvsD~~~~~-~~~a~~------------------~ga~~v-~~~ell~~~~D 233 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTER-VAHAVA------------------LGHTAV-ALEDVLSTPCD 233 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHH-HHHHHH------------------TTCEEC-CGGGGGGCCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCccH-HHHHHh------------------cCCEEe-ChHHhhcCccc
Confidence 4799999999999999999987 9999999999765 322221 012333 3345555 899
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhcCCCceEEeeCCccc
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNSRGINFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+++-|- +. +..+.. .+ +.++ ..+|+..+.. |-+.++-.+.|++.+ +.+.|..+
T Consensus 234 IliP~A-~~---------~~I~~~----~~----~~lk-~~iVie~AN~-p~t~~eA~~~L~~~g------Ilv~Pd~~ 286 (355)
T 1c1d_A 234 VFAPCA-MG---------GVITTE----VA----RTLD-CSVVAGAANN-VIADEAASDILHARG------ILYAPDFV 286 (355)
T ss_dssp EEEECS-CS---------CCBCHH----HH----HHCC-CSEECCSCTT-CBCSHHHHHHHHHTT------CEECCHHH
T ss_pred eecHhH-HH---------hhcCHH----HH----hhCC-CCEEEECCCC-CCCCHHHHHHHHhCC------EEEECCeE
Confidence 998552 21 123322 22 2344 4666654433 444433356676653 34667654
No 409
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.85 E-value=0.031 Score=58.18 Aligned_cols=114 Identities=16% Similarity=0.194 Sum_probs=77.9
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....++..|.+.|.+|.+||......+....- ++ ++ .++....
T Consensus 3 m~IgvIG~G~----------mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~-----------~~----~g--~gi~~~~ 55 (482)
T 2pgd_A 3 ADIALIGLAV----------MGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-----------EA----KG--TKVLGAH 55 (482)
T ss_dssp BSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-----------TT----TT--SSCEECS
T ss_pred CeEEEEChHH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc-----------cc----cC--CCeEEeC
Confidence 4799999854 88899999999999999999864432211110 00 00 2456677
Q ss_pred Chhhhc---ccCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEec
Q 011650 405 DAYEAT---KDSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~---~~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG 466 (480)
++++++ +++|+|+++++.+ ..++ -.+++...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 56 ~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 56 SLEEMVSKLKKPRRIILLVKAGQAVDN-FIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp SHHHHHHHBCSSCEEEECSCTTHHHHH-HHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHhhccCCCEEEEeCCChHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCC
Confidence 888876 4899999999986 4444 2346667777666999998877532 2234577777654
No 410
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.85 E-value=0.0095 Score=55.42 Aligned_cols=74 Identities=5% Similarity=0.066 Sum_probs=50.7
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.| .|.+|..++..|+++++|++|+++++++++.+.+..+ ..+..-+ +.-..+++++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~D------------~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-ADVFIGD------------ITDADSINPAFQGI 70 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCC-TTEEECC------------TTSHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCC-eeEEEec------------CCCHHHHHHHHcCC
Confidence 47899998 6999999999999873369999999999887665221 1111111 10012344556789
Q ss_pred CEEEEEcc
Q 011650 80 NIVFVSVN 87 (480)
Q Consensus 80 DvVii~Vp 87 (480)
|+||-|..
T Consensus 71 d~vi~~a~ 78 (253)
T 1xq6_A 71 DALVILTS 78 (253)
T ss_dssp SEEEECCC
T ss_pred CEEEEecc
Confidence 99999875
No 411
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.84 E-value=0.03 Score=57.79 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=71.9
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC--------
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST-------- 396 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 396 (480)
.||+|+|+.| -.+.++..|.+.|.+|.+||..-..-+.... + . .|+. .++.
T Consensus 3 mkI~VIG~G~----------vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~-g---~---~~i~----e~gl~~~l~~~~ 61 (450)
T 3gg2_A 3 LDIAVVGIGY----------VGLVSATCFAELGANVRCIDTDRNKIEQLNS-G---T---IPIY----EPGLEKMIARNV 61 (450)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T---C---SCCC----STTHHHHHHHHH
T ss_pred CEEEEECcCH----------HHHHHHHHHHhcCCEEEEEECCHHHHHHHHc-C---C---Cccc----CCCHHHHHHhhc
Confidence 4899999987 8999999999999999999985332111111 0 0 0100 0010
Q ss_pred -cCceEEecChhhhcccCcEEEEeecCcc----------cccccHHHHHhhcCCCCEEEEcCCCCC
Q 011650 397 -INQVIVASDAYEATKDSHGVCILTEWDE----------FKNLDYQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 397 -~~~~~~~~~~~~a~~~~d~~vi~~~~~~----------~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
..++++.+++.++++++|+++++++-+. .++ -.+.+...+++..+|++...+..
T Consensus 62 ~~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~-v~~~i~~~l~~g~iVV~~STv~p 126 (450)
T 3gg2_A 62 KAGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLD-AARSIGRAMSRYILIVTKSTVPV 126 (450)
T ss_dssp HTTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHH-HHHHHHHHCCSCEEEEECSCCCT
T ss_pred ccCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHH-HHHHHHhhCCCCCEEEEeeeCCC
Confidence 2347788899999999999999997762 222 23466666777779999987554
No 412
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.83 E-value=0.14 Score=49.56 Aligned_cols=105 Identities=14% Similarity=0.139 Sum_probs=65.1
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
.+|.|+|+ |.+|..++..+.+. |++ .++.+|+.+. +. .+ .++.+..+++++.. .
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 70 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY--GTK-VVAGVTPGKG-----GS-EV--------------HGVPVYDSVKEALAEHP 70 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHCT
T ss_pred CEEEEECCCCCHHHHHHHHHHhC--CCc-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCC
Confidence 36888898 99999999999887 888 5566665421 00 00 24677888888665 4
Q ss_pred -CCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 79 -ANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 79 -aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
+|++++++|.+. +.++++...+. ....+|+..+.++....+++.+..++.+
T Consensus 71 ~~DvaIi~vp~~~---------------~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 122 (297)
T 2yv2_A 71 EINTSIVFVPAPF---------------APDAVYEAVDA-GIRLVVVITEGIPVHDTMRFVNYARQKG 122 (297)
T ss_dssp TCCEEEECCCGGG---------------HHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCHHH---------------HHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 999999998532 24444444442 2233454444444433445666665543
No 413
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.82 E-value=0.0027 Score=62.84 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=44.4
Q ss_pred ceEEEECCChhHHHHHHHHHHcCC--------CCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCP--------SIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDV 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~--------G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~ 72 (480)
+||+|||+|.||..++..+.++ + +.+|. ++|++.++.+ + + +. ..+++|+
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~-~~~l~~~g~~~~lvaV~d~~~~~~~----~---~---~~-----------~~~~~d~ 61 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLER-AEELSAFGVVPRFLGVLVRDPRKPR----A---I---PQ-----------ELLRAEP 61 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-GGGGGGGTEEEEEEEEECSCTTSCC----S---S---CG-----------GGEESSC
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-hhhHhhcCCCEEEEEEEECCHHHhh----c---c---Cc-----------ccccCCH
Confidence 6899999999999999998875 2 24554 4677743211 1 1 00 1256787
Q ss_pred HHHhhcCCEEEEEccC
Q 011650 73 EKHVREANIVFVSVNT 88 (480)
Q Consensus 73 ~~a~~~aDvVii~Vpt 88 (480)
++.+ +.|+|++|+|+
T Consensus 62 ~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 62 FDLL-EADLVVEAMGG 76 (332)
T ss_dssp CCCT-TCSEEEECCCC
T ss_pred HHHh-CCCEEEECCCC
Confidence 7766 99999999875
No 414
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.80 E-value=0.021 Score=55.15 Aligned_cols=108 Identities=8% Similarity=0.093 Sum_probs=73.0
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+. .-+..+++.|.+.|.+|.+||+.-.. .. .+. ..++....
T Consensus 5 ~~i~iiG~G----------~~G~~~a~~l~~~g~~V~~~~~~~~~--~~-~~~-------------------~~g~~~~~ 52 (301)
T 3cky_A 5 IKIGFIGLG----------AMGKPMAINLLKEGVTVYAFDLMEAN--VA-AVV-------------------AQGAQACE 52 (301)
T ss_dssp CEEEEECCC----------TTHHHHHHHHHHTTCEEEEECSSHHH--HH-HHH-------------------TTTCEECS
T ss_pred CEEEEECcc----------HHHHHHHHHHHHCCCeEEEEeCCHHH--HH-HHH-------------------HCCCeecC
Confidence 589999974 47888999999999999999985322 21 121 01355677
Q ss_pred ChhhhcccCcEEEEeecCcc-cccccH--HHHHhhcCCCCEEEEcCCCCC--hHHH----hhcCcEEEE
Q 011650 405 DAYEATKDSHGVCILTEWDE-FKNLDY--QKIYNNMQKPAFVFDGRNILD--VEKL----RKIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~~--~~~~----~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+. ++..-. +.+...+++..+|+|..+... .+.+ .+.|++|..
T Consensus 53 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~ 121 (301)
T 3cky_A 53 NNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD 121 (301)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 88999999999999997653 332211 144556666669999988773 2222 234777754
No 415
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.76 E-value=0.03 Score=53.60 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=67.7
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC--eEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKA--RLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
++|+|+|+. .-+..++..|.+.|. +|.+||+.....+....++ .. ...
T Consensus 2 ~~I~iIG~G----------~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g------------------~~--~~~ 51 (281)
T 2g5c_A 2 QNVLIVGVG----------FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG------------------II--DEG 51 (281)
T ss_dssp CEEEEESCS----------HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT------------------SC--SEE
T ss_pred cEEEEEecC----------HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCC------------------Cc--ccc
Confidence 479999974 478899999999998 9999999643322222221 00 023
Q ss_pred ecChhhhcc-cCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCC
Q 011650 403 ASDAYEATK-DSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 403 ~~~~~~a~~-~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
.+++.++++ ++|+|+++++.....+. .+++...+++..+|+|..+.-.
T Consensus 52 ~~~~~~~~~~~aDvVilavp~~~~~~v-~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 52 TTSIAKVEDFSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp ESCGGGGGGTCCSEEEECSCHHHHHHH-HHHHHHHSCTTCEEEECCSCCT
T ss_pred cCCHHHHhcCCCCEEEEcCCHHHHHHH-HHHHHhhCCCCcEEEECCCCcH
Confidence 457778899 99999999998766542 2456666776679999877654
No 416
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.76 E-value=0.038 Score=54.19 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=52.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCC---HHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEe--cC---H
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS---VPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFS--TD---V 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~---~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t--~d---~ 72 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|+ .++.+++.+. +-.. ....+.+. ++ +
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~--Ga~~V~i~nR~~~~~~~a~~la~~-----------~~~~-~~~~~~~~~~~~~~~l 220 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD--GVKEISIFNRKDDFYANAEKTVEK-----------INSK-TDCKAQLFDIEDHEQL 220 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHH-----------HHHH-SSCEEEEEETTCHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHC--CCCEEEEEECCCchHHHHHHHHHH-----------hhhh-cCCceEEeccchHHHH
Confidence 4789999999999999999998 87 89999999 8887776531 0000 00112221 22 3
Q ss_pred HHHhhcCCEEEEEccCC
Q 011650 73 EKHVREANIVFVSVNTP 89 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp 89 (480)
.+.+.++|+||-|+|..
T Consensus 221 ~~~l~~aDiIINaTp~G 237 (315)
T 3tnl_A 221 RKEIAESVIFTNATGVG 237 (315)
T ss_dssp HHHHHTCSEEEECSSTT
T ss_pred HhhhcCCCEEEECccCC
Confidence 45577999999998754
No 417
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.75 E-value=0.0068 Score=59.02 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.4
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
||+|.|.|. |.+|..++..|++. |++|+++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCc
Confidence 678999995 99999999999998 99999999985
No 418
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.75 E-value=0.0064 Score=60.88 Aligned_cols=32 Identities=25% Similarity=0.620 Sum_probs=26.8
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeC
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDI 34 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~ 34 (480)
|||+|+| .|++|.-+...|.++ +..+++.+..
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~ 49 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTA 49 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeC
Confidence 5899999 899999999999876 4568877754
No 419
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.75 E-value=0.0094 Score=58.25 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=35.2
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
|+|.|.|. |.+|..++..|+++ |++|++++++++..+.+.
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHH
Confidence 68999987 99999999999998 999999999987765543
No 420
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.74 E-value=0.0035 Score=61.53 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=47.3
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.| .|.+|..++..|+++ |++|+++++++...+.+......+.. +.+.-..++.++++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~------------~Dl~d~~~~~~~~~~~ 78 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRV------------AEMLDHAGLERALRGL 78 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEE------------ecCCCHHHHHHHHcCC
Confidence 47999999 599999999999998 99999999987654433321111000 0110011234556789
Q ss_pred CEEEEEcc
Q 011650 80 NIVFVSVN 87 (480)
Q Consensus 80 DvVii~Vp 87 (480)
|+||-|..
T Consensus 79 d~vih~a~ 86 (342)
T 2x4g_A 79 DGVIFSAG 86 (342)
T ss_dssp SEEEEC--
T ss_pred CEEEECCc
Confidence 99998875
No 421
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.73 E-value=0.076 Score=54.23 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=71.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCC
Q 011650 310 FVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHL 389 (480)
Q Consensus 310 ~~~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ 389 (480)
++.-+.+..+..+.+++|+|+|.. .-...+++.|...|++|.+||+.-........
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G----------~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~-------------- 288 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYG----------DVGKGSAQSLAGAGARVKVTEVDPICALQAAM-------------- 288 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH--------------
T ss_pred HHHHHHHhcCCcccCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh--------------
Confidence 334455555667899999999963 36888999999999999999763211111111
Q ss_pred CCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCC
Q 011650 390 QPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRN 448 (480)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.++.+ .+++++++.+|+++..|..+.. ++- +....|++.++|+++-+
T Consensus 289 --------~G~~v-v~LeElL~~ADIVv~atgt~~l--I~~-e~l~~MK~GAILINvGR 335 (464)
T 3n58_A 289 --------DGFEV-VTLDDAASTADIVVTTTGNKDV--ITI-DHMRKMKDMCIVGNIGH 335 (464)
T ss_dssp --------TTCEE-CCHHHHGGGCSEEEECCSSSSS--BCH-HHHHHSCTTEEEEECSS
T ss_pred --------cCcee-ccHHHHHhhCCEEEECCCCccc--cCH-HHHhcCCCCeEEEEcCC
Confidence 22333 3789999999999998765432 344 44577888888888755
No 422
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.73 E-value=0.034 Score=53.27 Aligned_cols=73 Identities=19% Similarity=0.360 Sum_probs=0.0
Q ss_pred ceEEEECCChh-HHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCC
Q 011650 2 VKICCIGAGYV-GGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREAN 80 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|.+ |.++|..|...+.|..|+++++. +.++.+.++.||
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~---------------------------------t~~L~~~~~~AD 205 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG---------------------------------TRDLPALTRQAD 205 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc---------------------------------hhHHHHHHhhCC
Q ss_pred EEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|---.. ..++++.+||+.+
T Consensus 206 IVI~Avg~p~~I~~--------------------~~vk~GavVIDVg 232 (281)
T 2c2x_A 206 IVVAAVGVAHLLTA--------------------DMVRPGAAVIDVG 232 (281)
T ss_dssp EEEECSCCTTCBCG--------------------GGSCTTCEEEECC
T ss_pred EEEECCCCCcccCH--------------------HHcCCCcEEEEcc
No 423
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.72 E-value=0.0025 Score=63.03 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=49.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHHHhcCCCEEEecCHHHH-hhc
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIY--EPGLEEVVKQCRGKNLFFSTDVEKH-VRE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a-~~~ 78 (480)
++|.|+|+|.+|..+|..|.+. |+ |+++|.|+++++ +++...++. ++...+. ++++ +++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~--------------L~~a~i~~ 177 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSD--------------LEKANVRG 177 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHH--------------HHHTCSTT
T ss_pred CCEEEECCcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHH--------------HHhcChhh
Confidence 4799999999999999999988 89 999999999998 765322211 1111111 2222 578
Q ss_pred CCEEEEEccC
Q 011650 79 ANIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
||.++++++.
T Consensus 178 a~~vi~~~~~ 187 (336)
T 1lnq_A 178 ARAVIVDLES 187 (336)
T ss_dssp EEEEEECCSS
T ss_pred ccEEEEcCCc
Confidence 9999999753
No 424
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.65 E-value=0.0057 Score=60.71 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.6
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcC-CCCeEEEEe
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKC-PSIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~-~G~~V~~~D 33 (480)
||||+|+| .|++|.-+...|.++. +.++++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 58999999 9999999999888751 356777665
No 425
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.59 E-value=0.024 Score=54.56 Aligned_cols=92 Identities=17% Similarity=0.213 Sum_probs=61.7
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEecC
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+. ..+..+++.|.+.|.+|.+||+.....+ .+. ..++....+
T Consensus 2 ~i~iiG~G----------~mG~~~a~~l~~~g~~V~~~~~~~~~~~---~~~-------------------~~g~~~~~~ 49 (296)
T 2gf2_A 2 PVGFIGLG----------NMGNPMAKNLMKHGYPLIIYDVFPDACK---EFQ-------------------DAGEQVVSS 49 (296)
T ss_dssp CEEEECCS----------TTHHHHHHHHHHTTCCEEEECSSTHHHH---HHH-------------------TTTCEECSS
T ss_pred eEEEEecc----------HHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHH-------------------HcCCeecCC
Confidence 68999974 3788999999999999999998643322 121 023566778
Q ss_pred hhhhcccCcEEEEeecCcc-cccccHHH---HHhhcCCCCEEEEcCCCC
Q 011650 406 AYEATKDSHGVCILTEWDE-FKNLDYQK---IYNNMQKPAFVFDGRNIL 450 (480)
Q Consensus 406 ~~~a~~~~d~~vi~~~~~~-~~~~~~~~---~~~~~~~~~~i~D~~~~~ 450 (480)
+.++++++|+|+++++.+. ++.. ... +...+++..+|+|..++-
T Consensus 50 ~~~~~~~~Dvvi~~vp~~~~~~~v-~~~~~~~~~~l~~~~~vv~~s~~~ 97 (296)
T 2gf2_A 50 PADVAEKADRIITMLPTSINAIEA-YSGANGILKKVKKGSLLIDSSTID 97 (296)
T ss_dssp HHHHHHHCSEEEECCSSHHHHHHH-HHSTTSGGGTCCTTCEEEECSCCC
T ss_pred HHHHHhcCCEEEEeCCCHHHHHHH-HhCchhHHhcCCCCCEEEECCCCC
Confidence 8899999999999986543 2221 111 222345556999955443
No 426
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.52 E-value=0.014 Score=58.21 Aligned_cols=32 Identities=22% Similarity=0.599 Sum_probs=26.0
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCC-----CCeEEEEe
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCP-----SIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~-----G~~V~~~D 33 (480)
||||+|+| .|++|..+...|.++ + .++++.+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~ 46 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALT 46 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEE
Confidence 46999999 999999999999876 2 24777664
No 427
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.48 E-value=0.047 Score=55.89 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=69.9
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC------
Q 011650 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST------ 396 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 396 (480)
+-.+|+|+|+.| -.+.++..|.+ |.+|.+||..-.. +. .+.. + ..|+ . .++.
T Consensus 35 ~~mkIaVIGlG~----------mG~~lA~~La~-G~~V~~~D~~~~~--v~-~l~~-g---~~~i--~--e~~l~~ll~~ 92 (432)
T 3pid_A 35 EFMKITISGTGY----------VGLSNGVLIAQ-NHEVVALDIVQAK--VD-MLNQ-K---ISPI--V--DKEIQEYLAE 92 (432)
T ss_dssp CCCEEEEECCSH----------HHHHHHHHHHT-TSEEEEECSCHHH--HH-HHHT-T---CCSS--C--CHHHHHHHHH
T ss_pred CCCEEEEECcCH----------HHHHHHHHHHc-CCeEEEEecCHHH--hh-HHhc-c---CCcc--c--cccHHHHHhh
Confidence 446999999987 88999999887 9999999975332 21 1110 0 0010 0 0000
Q ss_pred -cCceEEecChhhhcccCcEEEEeecCccc---cccc-------HHHHHhhcCCCCEEEEcCCCCC
Q 011650 397 -INQVIVASDAYEATKDSHGVCILTEWDEF---KNLD-------YQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 397 -~~~~~~~~~~~~a~~~~d~~vi~~~~~~~---~~~~-------~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
..++++.+++.+++++||+|+++++-+.= ...| .+.+.. +++..+|||...+..
T Consensus 93 ~~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~p 157 (432)
T 3pid_A 93 KPLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPV 157 (432)
T ss_dssp SCCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCT
T ss_pred ccCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCCh
Confidence 12577888999999999999999887621 0122 245566 677779999877665
No 428
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.47 E-value=0.0098 Score=58.70 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=48.9
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCH----HHHHHH---HcCCCCCCCCChHHHHHHhcCCCEEEecCHH
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV----PRINAW---NSDQLPIYEPGLEEVVKQCRGKNLFFSTDVE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~----~~v~~l---~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (480)
|+|.|.|+ |++|..++..|.+. |++|++++|++ ++.+.+ ......+.. +.+.-..++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~------------~Dl~d~~~l~ 76 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVY------------GLINEQEAME 76 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEE------------CCTTCHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEE------------eecCCHHHHH
Confidence 68999997 99999999999998 89999999976 444432 221111111 1111112344
Q ss_pred HHhh--cCCEEEEEccC
Q 011650 74 KHVR--EANIVFVSVNT 88 (480)
Q Consensus 74 ~a~~--~aDvVii~Vpt 88 (480)
++++ ++|+||-|...
T Consensus 77 ~~~~~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 77 KILKEHEIDIVVSTVGG 93 (346)
T ss_dssp HHHHHTTCCEEEECCCG
T ss_pred HHHhhCCCCEEEECCch
Confidence 5667 99999999753
No 429
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.45 E-value=0.0039 Score=57.53 Aligned_cols=69 Identities=10% Similarity=0.302 Sum_probs=45.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEE-EEeCCHH-HHHH-HHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh-
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVP-RINA-WNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~-~v~~-l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
.+|+|+|+|.+|..++..+.....|+++. ++|.|++ ++.. .-.| .| +.-.+++++.++
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~G-vp-----------------V~~~~dL~~~v~~ 146 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDG-IP-----------------VYGISTINDHLID 146 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTC-CB-----------------EEEGGGHHHHC-C
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECC-eE-----------------EeCHHHHHHHHHH
Confidence 47999999999999998742111377766 4799987 5432 1111 12 223456666555
Q ss_pred -cCCEEEEEccC
Q 011650 78 -EANIVFVSVNT 88 (480)
Q Consensus 78 -~aDvVii~Vpt 88 (480)
+.|.+++|+|+
T Consensus 147 ~~Id~vIIAvPs 158 (212)
T 3keo_A 147 SDIETAILTVPS 158 (212)
T ss_dssp CSCCEEEECSCG
T ss_pred cCCCEEEEecCc
Confidence 58999999985
No 430
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.44 E-value=0.041 Score=53.79 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=29.8
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||+|.|.| .|.+|..++..|++. |++|+++|++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCC
Confidence 78999998 699999999999998 9999999974
No 431
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.33 E-value=0.12 Score=53.72 Aligned_cols=117 Identities=20% Similarity=0.238 Sum_probs=67.4
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEEEEeCCHHH-HHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVPR-INAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~-v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+++|.|||+|..|.+ +|..|.+. |++|+++|..... .+.+.+....+ ..-.+.+ .+.+
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~~-----------------~~g~~~~-~~~~ 78 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNPVTQQLMNLGATI-----------------YFNHRPE-NVRD 78 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCEE-----------------ESSCCGG-GGTT
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHCCCEE-----------------ECCCCHH-HcCC
Confidence 368999999999997 89999888 9999999986532 23343321111 1112233 3678
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHH-------HHHHHHHHHhhCCCCcEEEEecCCCcccHHH-HHHHHHhhc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTY-------WESAARMIADVSKSDKIVVEKSTVPVKTAEA-IEKILMHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~-------v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||+.-.-|.+ .+.+.. +....+.+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 79 a~~vv~s~~i~~~--------~p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 145 (491)
T 2f00_A 79 ASVVVVSSAISAD--------NPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAG 145 (491)
T ss_dssp CSEEEECTTCCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCC--------CHHHHHHHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 9988876322211 111100 0011122333344346777777886666655 577787653
No 432
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.32 E-value=0.094 Score=52.12 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=26.5
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEe
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|+||||+|.|++|.-+...|..+ +.++|+.+.
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-p~veivain 48 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-NDITVVAIN 48 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-SSCEEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-CCeEEEEec
Confidence 46999999999999999988875 578877664
No 433
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.32 E-value=0.012 Score=54.08 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=29.9
Q ss_pred eEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
.|+|||+|..|+++|..|+++ |++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 599999999999999999999 99999999764
No 434
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.31 E-value=0.013 Score=61.39 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=32.7
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPR 38 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
+|||.|.| .|++|..++..|.++ |++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCC
Confidence 58999999 699999999999998 9999999998653
No 435
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.31 E-value=0.14 Score=53.71 Aligned_cols=115 Identities=11% Similarity=0.016 Sum_probs=67.8
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISV--PRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~--~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+++|-|||.|-.|.+ +|..|.++ |++|++.|.+. ...+.|.+...+ +..-.+.+....
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~--G~~V~~sD~~~~~~~~~~L~~~gi~-----------------~~~G~~~~~~~~ 79 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARAL--GHTVTGSDANIYPPMSTQLEQAGVT-----------------IEEGYLIAHLQP 79 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCCTTHHHHHHHTTCE-----------------EEESCCGGGGCS
T ss_pred CCEEEEEEecHhhHHHHHHHHHhC--CCEEEEECCCCCcHHHHHHHHCCCE-----------------EECCCCHHHcCC
Confidence 378999999999997 57777777 99999999863 234444432111 222234444235
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHH----------HHhhC-CCCcEEEEecCCCcccHHH-HHHHHHhhc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARM----------IADVS-KSDKIVVEKSTVPVKTAEA-IEKILMHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~----------i~~~l-~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
++|+||++-.-|.+ .|. +..+.+. +...+ +...+|.+..|..-.||.. +..+|++.+
T Consensus 80 ~~d~vV~Spgi~~~--------~p~---l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 80 APDLVVVGNAMKRG--------MDV---IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp CCSEEEECTTCCTT--------SHH---HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCcCCC--------CHH---HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 78999876332211 233 3333221 23323 3346777777876666655 567777653
No 436
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.29 E-value=0.17 Score=50.64 Aligned_cols=112 Identities=13% Similarity=0.045 Sum_probs=67.4
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcC---
Q 011650 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTIN--- 398 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 398 (480)
+.+++|+|+|.. .-.+..++.|...|++|.+||+.....+....++. .+.... ......+.+.
T Consensus 182 v~~~kV~ViG~G----------~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa---~~~~l~-~~~~~~~gya~~~ 247 (381)
T 3p2y_A 182 VKPASALVLGVG----------VAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGA---QWLDLG-IDAAGEGGYAREL 247 (381)
T ss_dssp ECCCEEEEESCS----------HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTC---EECCCC--------------
T ss_pred cCCCEEEEECch----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---eEEecc-ccccccccchhhh
Confidence 478899999963 47788999999999999999998665333333321 000000 0000000000
Q ss_pred ----ceEEecChhhhcccCcEEEEeecCccc--ccccHHHHHhhcCCCCEEEEcC
Q 011650 399 ----QVIVASDAYEATKDSHGVCILTEWDEF--KNLDYQKIYNNMQKPAFVFDGR 447 (480)
Q Consensus 399 ----~~~~~~~~~~a~~~~d~~vi~~~~~~~--~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
......++.++++++|+||..+..|.= ..+=.++..+.|++..+|||.-
T Consensus 248 ~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 248 SEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 000123677899999999987644421 1122356778898888999984
No 437
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.29 E-value=0.035 Score=53.17 Aligned_cols=104 Identities=11% Similarity=0.126 Sum_probs=69.1
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEecC
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+. .-+..+++.|.+ |.+|.+||+.....+..... ++...+
T Consensus 3 ~i~iiG~G----------~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~----------------------g~~~~~- 48 (289)
T 2cvz_A 3 KVAFIGLG----------AMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE----------------------FGSEAV- 48 (289)
T ss_dssp CEEEECCS----------TTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH----------------------HCCEEC-
T ss_pred eEEEEccc----------HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC----------------------CCcccC-
Confidence 69999974 478889999999 99999999865432211111 123334
Q ss_pred hhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCCCCCh--HH----HhhcCcEEEE
Q 011650 406 AYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRNILDV--EK----LRKIGFIVYS 464 (480)
Q Consensus 406 ~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~--~~----~~~~g~~y~~ 464 (480)
+.++++++|+|+++++.+. .++ -.+.+...+++..+|+|..+.... +. +.+.|..|.+
T Consensus 49 ~~~~~~~~D~vi~~v~~~~~~~~-v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 49 PLERVAEARVIFTCLPTTREVYE-VAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp CGGGGGGCSEEEECCSSHHHHHH-HHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHhCCCEEEEeCCChHHHHH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6778899999999999875 443 224555566666689999876532 12 2234666654
No 438
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.28 E-value=0.017 Score=56.07 Aligned_cols=71 Identities=15% Similarity=0.172 Sum_probs=46.9
Q ss_pred eEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHH-HHHH---HHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVP-RINA---WNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~-~v~~---l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+|.|.|. |.+|..++..|++. |++|++++|+++ +.+. +......+.. +.+.-..++.++++
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~------------~Dl~d~~~l~~a~~ 78 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVK------------GELDEHEKLVELMK 78 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred eEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEE------------ecCCCHHHHHHHHc
Confidence 7999995 99999999999998 999999999864 3222 2221111110 00100123455678
Q ss_pred cCCEEEEEcc
Q 011650 78 EANIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||.|.+
T Consensus 79 ~~d~vi~~a~ 88 (318)
T 2r6j_A 79 KVDVVISALA 88 (318)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 9999999875
No 439
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.27 E-value=0.0064 Score=60.83 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=25.6
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+||| .||+|.-+...|.++ |..++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~ 39 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEE
Confidence 4799999 699999999988775 667877664
No 440
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.27 E-value=0.0064 Score=60.83 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=25.6
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+||| .||+|.-+...|.++ |..++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~ 39 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEE
Confidence 4799999 699999999988775 667877664
No 441
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.27 E-value=0.028 Score=54.03 Aligned_cols=110 Identities=9% Similarity=0.062 Sum_probs=72.6
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhC--CCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceE
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGD--KARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVI 401 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~--g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
..+|+|+|+.. -+..++..|.+. |.+|.+||+.....+....++ .. ..
T Consensus 6 ~~~I~iIG~G~----------mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g------------------~~--~~ 55 (290)
T 3b1f_A 6 EKTIYIAGLGL----------IGASLALGIKRDHPHYKIVGYNRSDRSRDIALERG------------------IV--DE 55 (290)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT------------------SC--SE
T ss_pred cceEEEEeeCH----------HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcC------------------Cc--cc
Confidence 45899999754 788899999887 689999998643222111111 00 03
Q ss_pred EecChhhhcccCcEEEEeecCcccccccHHHHHhh-cCCCCEEEEcCCCCCh--HHHhh----cCcEEEE
Q 011650 402 VASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNN-MQKPAFVFDGRNILDV--EKLRK----IGFIVYS 464 (480)
Q Consensus 402 ~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~-~~~~~~i~D~~~~~~~--~~~~~----~g~~y~~ 464 (480)
...++.++++++|+|+++++.+..++. .+++... +++..+|+|..+.... +.+.+ .++++.+
T Consensus 56 ~~~~~~~~~~~aDvVilavp~~~~~~v-~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~ 124 (290)
T 3b1f_A 56 ATADFKVFAALADVIILAVPIKKTIDF-IKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVG 124 (290)
T ss_dssp EESCTTTTGGGCSEEEECSCHHHHHHH-HHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred ccCCHHHhhcCCCEEEEcCCHHHHHHH-HHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEE
Confidence 456777888999999999998876443 3456665 6666799998776432 33332 1666655
No 442
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.26 E-value=0.12 Score=53.42 Aligned_cols=117 Identities=19% Similarity=0.223 Sum_probs=66.8
Q ss_pred CceEEEECCChhHHH-HHHHHHHcCCCCeEEEEeCCHHH-HHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhc
Q 011650 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVPR-INAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVRE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~-v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+++|.|||+|..|.+ +|..|.+. |++|+++|..... .+.+.+.... +..-.+.+ .+.+
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~-----------------~~~g~~~~-~~~~ 77 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAK-----------------IYIGHAEE-HIEG 77 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCE-----------------EEESCCGG-GGTT
T ss_pred CCEEEEEeecHHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHHHhCCCE-----------------EECCCCHH-HcCC
Confidence 368999999999997 99999988 9999999986533 2333321111 11122333 3678
Q ss_pred CCEEEEEccCCCCcCCCCCCCCCchHH-------HHHHHHHHHhhCCCCcEEEEecCCCcccHHH-HHHHHHhhc
Q 011650 79 ANIVFVSVNTPTKTQGLGAGKAADLTY-------WESAARMIADVSKSDKIVVEKSTVPVKTAEA-IEKILMHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~-------v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||+.-.-|.+ .+.+.. +....+.+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 78 a~~vv~s~~i~~~--------~~~~~~a~~~~i~vl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 144 (475)
T 1p3d_A 78 ASVVVVSSAIKDD--------NPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAK 144 (475)
T ss_dssp CSEEEECTTSCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCC--------CHHHHHHHHcCCcEEEHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 9988876322211 111100 0001112222333335776777886666655 577787654
No 443
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.23 E-value=0.065 Score=50.52 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=66.3
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhH-HHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEH-IQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.+|+|+|+.. .+..+++.|.+.|.+|.+||+.....+ +...+ ++...
T Consensus 4 m~i~iiG~G~----------mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------------------g~~~~ 51 (259)
T 2ahr_A 4 MKIGIIGVGK----------MASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------------------ALPYA 51 (259)
T ss_dssp CEEEEECCSH----------HHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------------------TCCBC
T ss_pred cEEEEECCCH----------HHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------------------CCEee
Confidence 4899999743 788899999999999999998633211 11112 23445
Q ss_pred cChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhh
Q 011650 404 SDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRK 457 (480)
Q Consensus 404 ~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~ 457 (480)
.++.++++++|+|+++++.... ..+...+++..+|+|..+-++.+.+.+
T Consensus 52 ~~~~~~~~~~D~Vi~~v~~~~~-----~~v~~~l~~~~~vv~~~~~~~~~~l~~ 100 (259)
T 2ahr_A 52 MSHQDLIDQVDLVILGIKPQLF-----ETVLKPLHFKQPIISMAAGISLQRLAT 100 (259)
T ss_dssp SSHHHHHHTCSEEEECSCGGGH-----HHHHTTSCCCSCEEECCTTCCHHHHHH
T ss_pred CCHHHHHhcCCEEEEEeCcHhH-----HHHHHHhccCCEEEEeCCCCCHHHHHH
Confidence 6788889999999999984432 234444445558999977666665543
No 444
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.22 E-value=0.057 Score=53.88 Aligned_cols=110 Identities=12% Similarity=0.054 Sum_probs=73.1
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..||+|+|.. +-...++..|.+.|.+|.+||..-..-+.....+....+ .|. -...+++...
T Consensus 29 ~mkI~VIGaG----------~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~-------l~g-~~l~~~i~~t 90 (356)
T 3k96_A 29 KHPIAILGAG----------SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRY-------LPN-YPFPETLKAY 90 (356)
T ss_dssp CSCEEEECCS----------HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTT-------BTT-CCCCTTEEEE
T ss_pred CCeEEEECcc----------HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCccc-------CCC-CccCCCeEEE
Confidence 4589999974 488899999999999999999853221111111100000 000 0123457778
Q ss_pred cChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCCh
Q 011650 404 SDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDV 452 (480)
Q Consensus 404 ~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~ 452 (480)
+++.++++++|+||++++...+++ -.+++...+++..+|++..+=+.+
T Consensus 91 ~d~~ea~~~aDvVilaVp~~~~~~-vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 91 CDLKASLEGVTDILIVVPSFAFHE-VITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp SCHHHHHTTCCEEEECCCHHHHHH-HHHHHGGGCCTTCEEEECCCSCBT
T ss_pred CCHHHHHhcCCEEEECCCHHHHHH-HHHHHHHhcCCCCEEEEEeCCCCc
Confidence 899999999999999999876554 245666666666689998774443
No 445
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.20 E-value=0.044 Score=54.13 Aligned_cols=42 Identities=26% Similarity=0.362 Sum_probs=31.1
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEE-eC-CHHHHHHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI-SVPRINAWN 43 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~-~~~~v~~l~ 43 (480)
|+||||+|.|++|.-+...|..+ +..+|.++ |. +++....+-
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~-~~veivain~~~~~~~~~~ll 44 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN-PDIEVVAVNDLTDANTLAHLL 44 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC-TTEEEEEEECSSCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhCC-CCeEEEEEeCCCCHHHHHHHh
Confidence 78999999999999999988765 56777665 43 444444443
No 446
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.17 E-value=0.11 Score=49.99 Aligned_cols=102 Identities=12% Similarity=0.157 Sum_probs=71.7
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC---eEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKA---RLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~---~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
..||+|+|. .+.+-.++..|.+.|. +|.+||+.....+.... ..++
T Consensus 3 ~~~I~iIG~----------G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---------------------~~gi 51 (280)
T 3tri_A 3 TSNITFIGG----------GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---------------------KCGV 51 (280)
T ss_dssp CSCEEEESC----------SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---------------------TTCC
T ss_pred CCEEEEEcc----------cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---------------------HcCC
Confidence 468999996 3588899999999998 99999996543221111 0145
Q ss_pred EEecChhhhcccCcEEEEeecCcccccccHHHHHhh-cCCCCEEEEcCCCCChHHHhh
Q 011650 401 IVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNN-MQKPAFVFDGRNILDVEKLRK 457 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~-~~~~~~i~D~~~~~~~~~~~~ 457 (480)
....+..++++++|+||++++...+++. ++++... +++..+|+..-+=+..+.+.+
T Consensus 52 ~~~~~~~~~~~~aDvVilav~p~~~~~v-l~~l~~~~l~~~~iiiS~~agi~~~~l~~ 108 (280)
T 3tri_A 52 HTTQDNRQGALNADVVVLAVKPHQIKMV-CEELKDILSETKILVISLAVGVTTPLIEK 108 (280)
T ss_dssp EEESCHHHHHSSCSEEEECSCGGGHHHH-HHHHHHHHHTTTCEEEECCTTCCHHHHHH
T ss_pred EEeCChHHHHhcCCeEEEEeCHHHHHHH-HHHHHhhccCCCeEEEEecCCCCHHHHHH
Confidence 6778889999999999999976655442 3455554 554447887766666655543
No 447
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.14 E-value=0.032 Score=54.36 Aligned_cols=93 Identities=11% Similarity=0.113 Sum_probs=64.5
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+. .-+..++..|.+.|.+|.+||+.....+.... .++....
T Consensus 31 ~~I~iIG~G----------~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~~ 78 (316)
T 2uyy_A 31 KKIGFLGLG----------LMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ----------------------EGARLGR 78 (316)
T ss_dssp SCEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH----------------------TTCEECS
T ss_pred CeEEEEccc----------HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------cCCEEcC
Confidence 589999974 37888999999999999999986443221111 1244567
Q ss_pred ChhhhcccCcEEEEeecCcc-cccccHHH---HHhhcCCCCEEEEcCCCC
Q 011650 405 DAYEATKDSHGVCILTEWDE-FKNLDYQK---IYNNMQKPAFVFDGRNIL 450 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~-~~~~~~~~---~~~~~~~~~~i~D~~~~~ 450 (480)
++.++++++|+|+++++.+. .++. ... +...+.+..+|+|..+..
T Consensus 79 ~~~~~~~~~DvVi~av~~~~~~~~v-~~~~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 79 TPAEVVSTCDITFACVSDPKAAKDL-VLGPSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp CHHHHHHHCSEEEECCSSHHHHHHH-HHSTTCGGGGCCTTCEEEECSCCC
T ss_pred CHHHHHhcCCEEEEeCCCHHHHHHH-HcCchhHhhcCCCCCEEEECCCCC
Confidence 88888999999999999543 2221 111 123455666999998865
No 448
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.13 E-value=0.067 Score=55.58 Aligned_cols=115 Identities=9% Similarity=0.175 Sum_probs=77.0
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChh-HHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQE-HIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+|+|+|+. +....++..|.+.|.+|.+||...... .+...++ . .| ...++....
T Consensus 3 kIgVIG~G----------~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g---~---~~---------~~~~i~~~~ 57 (478)
T 1pgj_A 3 DVGVVGLG----------VMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA---S---AP---------FAGNLKAFE 57 (478)
T ss_dssp SEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---T---ST---------TGGGEEECS
T ss_pred EEEEEChH----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC---C---CC---------CCCCeEEEC
Confidence 69999974 488899999999999999999853322 1211111 0 00 012366778
Q ss_pred Chhhhcc---cCcEEEEeecCc-ccccccHHHHHhhcCCCCEEEEcCCCCChH------HHhhcCcEEEEec
Q 011650 405 DAYEATK---DSHGVCILTEWD-EFKNLDYQKIYNNMQKPAFVFDGRNILDVE------KLRKIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~---~~d~~vi~~~~~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG 466 (480)
+++++++ ++|+|+++++.. ..++. .+.+...+++..+|+|+.+..... .+.+.|+.|.+.+
T Consensus 58 ~~~e~v~~l~~aDvVilaVp~~~~v~~v-l~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~p 128 (478)
T 1pgj_A 58 TMEAFAASLKKPRKALILVQAGAATDST-IEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG 128 (478)
T ss_dssp CHHHHHHHBCSSCEEEECCCCSHHHHHH-HHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHhcccCCCEEEEecCChHHHHHH-HHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEee
Confidence 8888777 499999999986 44442 356667776666999998877432 2234577776654
No 449
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.12 E-value=0.036 Score=52.04 Aligned_cols=100 Identities=12% Similarity=0.203 Sum_probs=67.7
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC----eEEEECCCCChhH-HHhhhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKA----RLSIYDPQVPQEH-IQRDLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~----~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.||+|+|+. .....+++.|.+.|. +|.+||+.-...+ +...+ +
T Consensus 3 ~~i~iIG~G----------~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~----------------------g 50 (247)
T 3gt0_A 3 KQIGFIGCG----------NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY----------------------G 50 (247)
T ss_dssp CCEEEECCS----------HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH----------------------C
T ss_pred CeEEEECcc----------HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh----------------------C
Confidence 479999974 378899999999998 9999998643221 11112 3
Q ss_pred eEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHHHhh
Q 011650 400 VIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRK 457 (480)
Q Consensus 400 ~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~ 457 (480)
+....+..++++++|+|+++++-..+.+. ++++...+++..+|+..-+-++.+.+++
T Consensus 51 ~~~~~~~~e~~~~aDvVilav~~~~~~~v-~~~l~~~l~~~~~vvs~~~gi~~~~l~~ 107 (247)
T 3gt0_A 51 LTTTTDNNEVAKNADILILSIKPDLYASI-INEIKEIIKNDAIIVTIAAGKSIESTEN 107 (247)
T ss_dssp CEECSCHHHHHHHCSEEEECSCTTTHHHH-C---CCSSCTTCEEEECSCCSCHHHHHH
T ss_pred CEEeCChHHHHHhCCEEEEEeCHHHHHHH-HHHHHhhcCCCCEEEEecCCCCHHHHHH
Confidence 56678899999999999999965554432 2344444554558886666666655543
No 450
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.10 E-value=0.073 Score=54.53 Aligned_cols=105 Identities=19% Similarity=0.186 Sum_probs=68.3
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC---------
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST--------- 396 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 396 (480)
+|+|+|+.| -...++..|.+.|.+|.++|..-.. +. .+.... -|+. .++.
T Consensus 2 kI~VIG~G~----------vG~~~A~~la~~G~~V~~~d~~~~~--~~-~l~~~~----~~i~----e~~l~~~~~~~~~ 60 (436)
T 1mv8_A 2 RISIFGLGY----------VGAVCAGCLSARGHEVIGVDVSSTK--ID-LINQGK----SPIV----EPGLEALLQQGRQ 60 (436)
T ss_dssp EEEEECCST----------THHHHHHHHHHTTCEEEEECSCHHH--HH-HHHTTC----CSSC----CTTHHHHHHHHHH
T ss_pred EEEEECCCH----------HHHHHHHHHHHCCCEEEEEECCHHH--HH-HHhCCC----CCcC----CCCHHHHHHhhcc
Confidence 799999877 8999999999999999999975332 21 121000 0110 0000
Q ss_pred cCceEEecChhhhcccCcEEEEeecCcc--ccccc-------HHHHHhhcCC---CCEEEEcCCCCC
Q 011650 397 INQVIVASDAYEATKDSHGVCILTEWDE--FKNLD-------YQKIYNNMQK---PAFVFDGRNILD 451 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~~d~~vi~~~~~~--~~~~~-------~~~~~~~~~~---~~~i~D~~~~~~ 451 (480)
...+...+++.++++++|+++++++-+. ....| .+.+...+++ ..+|++...+..
T Consensus 61 ~g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~ 127 (436)
T 1mv8_A 61 TGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLP 127 (436)
T ss_dssp TTCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCT
T ss_pred cCceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCC
Confidence 1236778888889999999999997654 11222 2455556665 568999766553
No 451
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.08 E-value=0.068 Score=52.70 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=30.6
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEE-eC-CHHHHHHH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI-SVPRINAW 42 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~-~~~~v~~l 42 (480)
|+||||+|.|++|.-+...+..+ +..+|.++ |. +.+....+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~-~~veiv~i~~~~~~~~~a~l 43 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR-SDIEIVAINDLLDADYMAYM 43 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSCHHHHHHH
T ss_pred CeEEEEECcCHHHHHHHHHHHcC-CCeEEEEEcCCCChhHHhHh
Confidence 67999999999999999988875 56777765 43 35544433
No 452
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.06 E-value=0.076 Score=55.14 Aligned_cols=107 Identities=14% Similarity=0.093 Sum_probs=71.3
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCC-------
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPST------- 396 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 396 (480)
.-||+|+|+.| -.+.++..|.+.|.+|.+||..-.. +. .+.... -|+ . .++.
T Consensus 8 ~~~I~VIG~G~----------vG~~lA~~la~~G~~V~~~d~~~~~--v~-~l~~~~----~~i--~--e~gl~~~l~~~ 66 (478)
T 2y0c_A 8 SMNLTIIGSGS----------VGLVTGACLADIGHDVFCLDVDQAK--ID-ILNNGG----VPI--H--EPGLKEVIARN 66 (478)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHH--HH-HHHTTC----CSS--C--CTTHHHHHHHH
T ss_pred CceEEEECcCH----------HHHHHHHHHHhCCCEEEEEECCHHH--HH-HHHCCC----CCc--C--CCCHHHHHHHh
Confidence 45999999988 8999999999999999999974322 21 121000 010 0 0110
Q ss_pred --cCceEEecChhhhcccCcEEEEeecCc---------ccccccHHHHHhhcCCCCEEEEcCCCCC
Q 011650 397 --INQVIVASDAYEATKDSHGVCILTEWD---------EFKNLDYQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 397 --~~~~~~~~~~~~a~~~~d~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
...+++.+++.++++++|+++++++-| .+..--.+.+...+++..+|++...+..
T Consensus 67 ~~~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~ 132 (478)
T 2y0c_A 67 RSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPV 132 (478)
T ss_dssp HHTTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCT
T ss_pred cccCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCC
Confidence 124678888888999999999998875 2222223456666776778898875543
No 453
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.05 E-value=0.022 Score=54.74 Aligned_cols=72 Identities=15% Similarity=0.161 Sum_probs=47.8
Q ss_pred ceEEEECC-ChhHHHHHHHHHHcCCC-CeEEEEeCCHHHH--HHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh
Q 011650 2 VKICCIGA-GYVGGPTMAVIALKCPS-IEVAVVDISVPRI--NAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR 77 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G-~~V~~~D~~~~~v--~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+|.|.|. |.+|..++..|++. | ++|+++++++++. +.+......+.. +.+.-..++.++++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQ------------GDQDDQVIMELALN 71 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEE------------ecCCCHHHHHHHHh
Confidence 57999997 99999999999998 7 9999999987643 233321111100 00100123445678
Q ss_pred cCCEEEEEcc
Q 011650 78 EANIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||.|.+
T Consensus 72 ~~d~vi~~a~ 81 (299)
T 2wm3_A 72 GAYATFIVTN 81 (299)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 8999999864
No 454
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.05 E-value=0.11 Score=50.75 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=51.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCC---HHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEe--cCH---
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS---VPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFS--TDV--- 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~---~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t--~d~--- 72 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|+ .++.+++.+. +-.. ....+... .+.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~--G~~~v~v~nRt~~~~~~a~~la~~-----------~~~~-~~~~v~~~~~~~l~~~ 214 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE--GIKEIKLFNRKDDFFEKAVAFAKR-----------VNEN-TDCVVTVTDLADQHAF 214 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTHHHHHHHHHHH-----------HHHH-SSCEEEEEETTCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCEEEEEECCCchHHHHHHHHHH-----------hhhc-cCcceEEechHhhhhh
Confidence 4789999999999999999998 87 89999999 7777766531 0000 00112222 232
Q ss_pred HHHhhcCCEEEEEccCC
Q 011650 73 EKHVREANIVFVSVNTP 89 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp 89 (480)
.+.+.++|+||-|+|..
T Consensus 215 ~~~l~~~DiIINaTp~G 231 (312)
T 3t4e_A 215 TEALASADILTNGTKVG 231 (312)
T ss_dssp HHHHHHCSEEEECSSTT
T ss_pred HhhccCceEEEECCcCC
Confidence 44578999999998754
No 455
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.04 E-value=0.091 Score=52.64 Aligned_cols=71 Identities=20% Similarity=0.219 Sum_probs=48.5
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCC----HHHH----HHHHcCCCCCCCCChHHHHHHhcCCCEEEecCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS----VPRI----NAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDV 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~----~~~v----~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~ 72 (480)
.||.|+|.|.+|..+|..|... |. +|+++|++ .++. +.+++ .+.+. .....-..++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~Gli~~~R~~~~L~~~k~-----------~~A~~--~~~~~~~~~L 257 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRKGILNENDPETCLNEYHL-----------EIARI--TNPERLSGDL 257 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETTEECCTTSGGGCSSHHHH-----------HHHHT--SCTTCCCSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCCcccCCCcccccCHHHH-----------HHHHh--hhccCchhhH
Confidence 4899999999999999999988 77 89999997 4441 11111 11111 0011124578
Q ss_pred HHHhhcCCEEEEEcc
Q 011650 73 EKHVREANIVFVSVN 87 (480)
Q Consensus 73 ~~a~~~aDvVii~Vp 87 (480)
+++++++|++|=+..
T Consensus 258 ~eav~~ADVlIG~Sa 272 (388)
T 1vl6_A 258 ETALEGADFFIGVSR 272 (388)
T ss_dssp HHHHTTCSEEEECSC
T ss_pred HHHHccCCEEEEeCC
Confidence 999999999887754
No 456
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.03 E-value=0.017 Score=58.16 Aligned_cols=82 Identities=21% Similarity=0.276 Sum_probs=52.1
Q ss_pred ceEEEECCChhHHHHH-HHHHHcCCCCeEEEEeCCHHHHHHHHcCCC-CCCCCChHHHHHHhcCCCEEE-ecC---HHHH
Q 011650 2 VKICCIGAGYVGGPTM-AVIALKCPSIEVAVVDISVPRINAWNSDQL-PIYEPGLEEVVKQCRGKNLFF-STD---VEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA-~~La~~~~G~~V~~~D~~~~~v~~l~~g~~-~~~e~~l~~~~~~~~~~~l~~-t~d---~~~a 75 (480)
||+..+|.|++|..+- ..|.+. |++|+..|+++..+++|++.+. .+...|.++....+ .+++. .++ +-+.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~--g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v--~~v~ai~s~~~~~~~~ 76 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA--GIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV--SGVNAVSSIGDDVVDL 76 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT--TCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEE--ESCEEEETTSSHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHc--CCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEE--EEEEEEeCcHHHHHHH
Confidence 8999999999996655 455565 9999999999999999996432 22211211000000 12232 122 3335
Q ss_pred hhcCCEEEEEcc
Q 011650 76 VREANIVFVSVN 87 (480)
Q Consensus 76 ~~~aDvVii~Vp 87 (480)
+.++|+|.++++
T Consensus 77 i~~adlitT~vG 88 (382)
T 3h2z_A 77 IAQVDLVTTAVG 88 (382)
T ss_dssp HTTCSEEEECCC
T ss_pred HcCCCEEEECCC
Confidence 679999988875
No 457
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.03 E-value=0.05 Score=55.80 Aligned_cols=117 Identities=10% Similarity=0.104 Sum_probs=66.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||.|||+|..|.+.|..|+++ |++|+++|.....- +...+. .| -++..-....+.+.++|+
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~~-----~~~~l~-~G----------~~~~~g~~~~~~~~~~d~ 67 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPP-----GLDKLP-EA----------VERHTGSLNDEWLMAADL 67 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSSSCT-----TGGGSC-TT----------SCEEESSCCHHHHHTCSE
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCCCcc-----hhHHhh-CC----------CEEEECCCcHHHhccCCE
Confidence 6899999999999999888887 99999999864210 000000 01 112212222445678999
Q ss_pred EEEEccCCCCcCCCCCCCCCchHHHHH-------HHHHHHhhCCCCcEEEEecCCCcccHHH-HHHHHHhhc
Q 011650 82 VFVSVNTPTKTQGLGAGKAADLTYWES-------AARMIADVSKSDKIVVEKSTVPVKTAEA-IEKILMHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~-------~~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
||++..-|.+ .|.+...++ -.+.+...+ +..+|-+..|..-+||.. +..+|++.+
T Consensus 68 vV~s~gi~~~--------~p~~~~a~~~~~~v~~~~~~~~~~~-~~~vI~VTGTnGKTTT~~ml~~iL~~~g 130 (439)
T 2x5o_A 68 IVASPGIALA--------HPSLSAAADAGIEIVGDIELFCREA-QAPIVAITGSNGKSTVTTLVGEMAKAAG 130 (439)
T ss_dssp EEECTTSCTT--------CHHHHHHHHTTCEEECHHHHHHHHC-CSCEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred EEeCCCCCCC--------CHHHHHHHHCCCcEEEHHHHHHHhc-CCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 9887433221 122211100 001122233 356777777887666655 567777653
No 458
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.03 E-value=0.061 Score=51.24 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=63.2
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEecC
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|.. .-+..+++.|.+.|.+|.+||+.....+....++ ... ....+
T Consensus 2 ~i~iiG~G----------~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g------------------~~~--~~~~~ 51 (279)
T 2f1k_A 2 KIGVVGLG----------LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ------------------LVD--EAGQD 51 (279)
T ss_dssp EEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT------------------SCS--EEESC
T ss_pred EEEEEcCc----------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC------------------CCc--cccCC
Confidence 68999964 4788899999999999999998643222111111 000 23567
Q ss_pred hhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC
Q 011650 406 AYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI 449 (480)
Q Consensus 406 ~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
+.++ +++|+|+++++.+...+. .+++...+++..+|+|..++
T Consensus 52 ~~~~-~~~D~vi~av~~~~~~~~-~~~l~~~~~~~~~vv~~~~~ 93 (279)
T 2f1k_A 52 LSLL-QTAKIIFLCTPIQLILPT-LEKLIPHLSPTAIVTDVASV 93 (279)
T ss_dssp GGGG-TTCSEEEECSCHHHHHHH-HHHHGGGSCTTCEEEECCSC
T ss_pred HHHh-CCCCEEEEECCHHHHHHH-HHHHHhhCCCCCEEEECCCC
Confidence 7787 999999999998755442 34566666666799998553
No 459
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.02 E-value=0.021 Score=50.47 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=31.8
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|++|.|||.|..|+.+|..|++. |.+|+++++++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~--g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA--GLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 67999999999999999999998 99999999875
No 460
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.02 E-value=0.11 Score=51.45 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.9
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCC-eEEEEeCC
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSI-EVAVVDIS 35 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~-~V~~~D~~ 35 (480)
|||.|.| .|.+|..++..|+++ |+ +|+..|++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 7999999 799999999999998 88 99999984
No 461
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.02 E-value=0.063 Score=50.70 Aligned_cols=90 Identities=12% Similarity=0.044 Sum_probs=61.6
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEecC
Q 011650 326 KIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+. .....+++.|.+.|++|.+||+.-.++... .+.. .++. ++
T Consensus 2 ~I~iIG~G----------~mG~~la~~l~~~g~~V~~~~~~~~~~~~~-~~~~-------------------~g~~--~~ 49 (264)
T 1i36_A 2 RVGFIGFG----------EVAQTLASRLRSRGVEVVTSLEGRSPSTIE-RART-------------------VGVT--ET 49 (264)
T ss_dssp EEEEESCS----------HHHHHHHHHHHHTTCEEEECCTTCCHHHHH-HHHH-------------------HTCE--EC
T ss_pred eEEEEech----------HHHHHHHHHHHHCCCeEEEeCCccCHHHHH-HHHH-------------------CCCc--CC
Confidence 68999974 478899999999999999999842332221 1110 1233 56
Q ss_pred hhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCC
Q 011650 406 AYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNIL 450 (480)
Q Consensus 406 ~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~ 450 (480)
+.++++++|+|+++++.+..... ...+...++ + +|+|..+.-
T Consensus 50 ~~~~~~~aDvvi~~v~~~~~~~~-~~~~~~~~~-~-~vi~~s~~~ 91 (264)
T 1i36_A 50 SEEDVYSCPVVISAVTPGVALGA-ARRAGRHVR-G-IYVDINNIS 91 (264)
T ss_dssp CHHHHHTSSEEEECSCGGGHHHH-HHHHHTTCC-S-EEEECSCCC
T ss_pred HHHHHhcCCEEEEECCCHHHHHH-HHHHHHhcC-c-EEEEccCCC
Confidence 77888999999999998753321 245555554 4 899996553
No 462
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.02 E-value=0.13 Score=50.09 Aligned_cols=63 Identities=13% Similarity=-0.031 Sum_probs=47.3
Q ss_pred eEEEE-CC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhh--c
Q 011650 3 KICCI-GA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVR--E 78 (480)
Q Consensus 3 kI~VI-Gl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+++|| |. |.+|...+..|.+. |++ .++++|+.+. +. .+ .++.+..+++++.+ .
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~--G~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 71 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEY--GTN-LVGGTTPGKG-----GK-TH--------------LGLPVFNTVKEAKEQTG 71 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred cEEEEECCCCCHHHHHHHHHHHC--CCc-EEEEeCCCcC-----cc-eE--------------CCeeeechHHHhhhcCC
Confidence 58888 98 99999999999988 898 4567766421 00 00 24677778888777 7
Q ss_pred CCEEEEEccC
Q 011650 79 ANIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|++++++|.
T Consensus 72 vD~avI~vP~ 81 (305)
T 2fp4_A 72 ATASVIYVPP 81 (305)
T ss_dssp CCEEEECCCH
T ss_pred CCEEEEecCH
Confidence 9999999984
No 463
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=95.01 E-value=0.092 Score=44.93 Aligned_cols=107 Identities=16% Similarity=0.133 Sum_probs=73.0
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.++|+|+|++-|+ ++.+..+++.|.+.|++|.--+|....+++ .++...
T Consensus 13 p~~vaVvGas~~~------g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i-------------------------~G~~~~ 61 (140)
T 1iuk_A 13 AKTIAVLGAHKDP------SRPAHYVPRYLREQGYRVLPVNPRFQGEEL-------------------------FGEEAV 61 (140)
T ss_dssp CCEEEEETCCSST------TSHHHHHHHHHHHTTCEEEEECGGGTTSEE-------------------------TTEECB
T ss_pred CCEEEEECCCCCC------CChHHHHHHHHHHCCCEEEEeCCCcccCcC-------------------------CCEEec
Confidence 5799999998776 578999999999999997777775211111 245666
Q ss_pred cChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChH---HHhhcCcEEEE
Q 011650 404 SDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVE---KLRKIGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y~~ 464 (480)
.|+.+.-+..|.++|.++-+.-.+. .+++.+.- ...+++. .+....+ ..++.|+++.|
T Consensus 62 ~sl~el~~~vDlavi~vp~~~~~~v-~~~~~~~g-i~~i~~~-~g~~~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 62 ASLLDLKEPVDILDVFRPPSALMDH-LPEVLALR-PGLVWLQ-SGIRHPEFEKALKEAGIPVVA 122 (140)
T ss_dssp SSGGGCCSCCSEEEECSCHHHHTTT-HHHHHHHC-CSCEEEC-TTCCCHHHHHHHHHTTCCEEE
T ss_pred CCHHHCCCCCCEEEEEeCHHHHHHH-HHHHHHcC-CCEEEEc-CCcCHHHHHHHHHHcCCEEEc
Confidence 7888877789999999988554442 33444442 2345554 5556644 34467999876
No 464
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.00 E-value=0.019 Score=56.81 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=45.8
Q ss_pred ceEEEECCChhHHHHHHHHHHcCC-------CCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCE-EEec--
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCP-------SIEVA-VVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNL-FFST-- 70 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~-------G~~V~-~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l-~~t~-- 70 (480)
+||+|||+|.||..++..+.+. + +.+|. ++|+++++.+.. ..++++......+.+ .+++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~-~~~~~~g~~~~vvaV~d~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 76 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSF-NEENRLGLKFNVVFVADSLHSYYNER---------IDIGKVISYKEKGSLDSLEYES 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCSSSEEEEEEEEECSSCEEECTT---------CCHHHHHHHHHTTCGGGCCSEE
T ss_pred EeEEEEecCHHHHHHHHHHHhC-hHHHhcCCcEEEEEEEECChHHhhcc---------cChHHHhhhhccCCcccccCCC
Confidence 4799999999999999998764 1 24554 567776442210 011111110001112 1344
Q ss_pred -CHHHHh-hcCCEEEEEccCC
Q 011650 71 -DVEKHV-REANIVFVSVNTP 89 (480)
Q Consensus 71 -d~~~a~-~~aDvVii~Vptp 89 (480)
|+++.+ .+.|+|++|+|+.
T Consensus 77 ~d~~~ll~~~iDvVv~~t~~~ 97 (331)
T 3c8m_A 77 ISASEALARDFDIVVDATPAS 97 (331)
T ss_dssp CCHHHHHHSSCSEEEECSCCC
T ss_pred CCHHHHhCCCCCEEEECCCCC
Confidence 787765 3689999998863
No 465
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.99 E-value=0.018 Score=54.72 Aligned_cols=73 Identities=10% Similarity=0.182 Sum_probs=47.0
Q ss_pred eEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHhhcCCE
Q 011650 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHVREANI 81 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
||.|.|. |.+|..++..|+++.+|++|+++++++++.+.+......+.. +.+.-..++.++++++|+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~d~~~~~~~~~~~d~ 68 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ------------ADYGDEAALTSALQGVEK 68 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCSE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEE------------cCCCCHHHHHHHHhCCCE
Confidence 5889986 999999999998742379999999987765554432111100 011001223456778999
Q ss_pred EEEEcc
Q 011650 82 VFVSVN 87 (480)
Q Consensus 82 Vii~Vp 87 (480)
||-+..
T Consensus 69 vi~~a~ 74 (286)
T 2zcu_A 69 LLLISS 74 (286)
T ss_dssp EEECC-
T ss_pred EEEeCC
Confidence 998865
No 466
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=94.94 E-value=0.16 Score=49.12 Aligned_cols=91 Identities=11% Similarity=0.121 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCC
Q 011650 307 KTRFVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHP 386 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~ 386 (480)
|.-+++. ++..+.++.+++|.|+|.+- .-...++..|.+.|+.|.+.+-.
T Consensus 149 p~gi~~l-l~~~~i~l~gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~-------------------- 198 (301)
T 1a4i_A 149 PKGCLEL-IKETGVPIAGRHAVVVGRSK---------IVGAPMHDLLLWNNATVTTCHSK-------------------- 198 (301)
T ss_dssp HHHHHHH-HHTTTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTT--------------------
T ss_pred HHHHHHH-HHHcCCCCCCCEEEEECCCc---------hHHHHHHHHHHhCCCeEEEEECC--------------------
Confidence 3333333 34445578999999999621 35788999999999999998622
Q ss_pred CCCCCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC
Q 011650 387 IHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI 449 (480)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
..++.+.++.||.||.++..+.|-.-+| +++.++|||.---
T Consensus 199 ----------------t~~L~~~~~~ADIVI~Avg~p~~I~~~~------vk~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ----------------TAHLDEEVNKGDILVVATGQPEMVKGEW------IKPGAIVIDCGIN 239 (301)
T ss_dssp ----------------CSSHHHHHTTCSEEEECCCCTTCBCGGG------SCTTCEEEECCCB
T ss_pred ----------------cccHHHHhccCCEEEECCCCcccCCHHH------cCCCcEEEEccCC
Confidence 1356788999999999999998844333 3556799998653
No 467
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=94.90 E-value=0.015 Score=58.19 Aligned_cols=30 Identities=13% Similarity=0.437 Sum_probs=24.1
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCC---eEEEEe
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSI---EVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~---~V~~~D 33 (480)
|||+||| .|++|.-+...|.++ +| ++..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~--~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES--TLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC--CCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC--CCCcEEEEEEE
Confidence 6999999 799999999988875 44 445554
No 468
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.90 E-value=0.12 Score=44.62 Aligned_cols=110 Identities=11% Similarity=0.017 Sum_probs=66.7
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHh-hhhcccCCCCCCCCCCCCCCCCcCc
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQR-DLQMNKFDWDHPIHLQPTSPSTINQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
...+.+|+|+|... -+..+++.|.+.|++|.++|+....-+... .++ ..
T Consensus 16 ~~~~~~v~IiG~G~----------iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g--------------------~~ 65 (155)
T 2g1u_A 16 KQKSKYIVIFGCGR----------LGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFS--------------------GF 65 (155)
T ss_dssp -CCCCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCC--------------------SE
T ss_pred ccCCCcEEEECCCH----------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCC--------------------Cc
Confidence 45678999999644 788999999999999999998533211100 000 00
Q ss_pred eEEe-----cChhhh-cccCcEEEEeecCcccccccHHHHHhh-cCCCCEEEEcCCCCChHHHhhcCcE
Q 011650 400 VIVA-----SDAYEA-TKDSHGVCILTEWDEFKNLDYQKIYNN-MQKPAFVFDGRNILDVEKLRKIGFI 461 (480)
Q Consensus 400 ~~~~-----~~~~~a-~~~~d~~vi~~~~~~~~~~~~~~~~~~-~~~~~~i~D~~~~~~~~~~~~~g~~ 461 (480)
+... +.+.++ ++++|+||++|+.++....-. .+... .+...+|....+.-..+.+++.|..
T Consensus 66 ~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~-~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~ 133 (155)
T 2g1u_A 66 TVVGDAAEFETLKECGMEKADMVFAFTNDDSTNFFIS-MNARYMFNVENVIARVYDPEKIKIFEENGIK 133 (155)
T ss_dssp EEESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHH-HHHHHTSCCSEEEEECSSGGGHHHHHTTTCE
T ss_pred EEEecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHH-HHHHHHCCCCeEEEEECCHHHHHHHHHCCCc
Confidence 1000 112333 678999999999876433222 23333 3344567777766666666666654
No 469
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.90 E-value=0.23 Score=48.01 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=61.9
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEE-ecCHHHH-hhcC
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFF-STDVEKH-VREA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a-~~~a 79 (480)
++|..||||..|.+ +..+++. +|.+|+++|++++.++..++. +++....++++ ..|..+. -...
T Consensus 124 ~rVLDIGcG~G~~t-a~~lA~~-~ga~V~gIDis~~~l~~Ar~~------------~~~~gl~~v~~v~gDa~~l~d~~F 189 (298)
T 3fpf_A 124 ERAVFIGGGPLPLT-GILLSHV-YGMRVNVVEIEPDIAELSRKV------------IEGLGVDGVNVITGDETVIDGLEF 189 (298)
T ss_dssp CEEEEECCCSSCHH-HHHHHHT-TCCEEEEEESSHHHHHHHHHH------------HHHHTCCSEEEEESCGGGGGGCCC
T ss_pred CEEEEECCCccHHH-HHHHHHc-cCCEEEEEECCHHHHHHHHHH------------HHhcCCCCeEEEECchhhCCCCCc
Confidence 57999999997654 3334553 488999999999998876641 01100024444 2343331 1467
Q ss_pred CEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEec
Q 011650 80 NIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS 127 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
|+|+++.-. +| ...+++.+...+++|..++...
T Consensus 190 DvV~~~a~~------------~d---~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAALA------------EP---KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTTC------------SC---HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCc------------cC---HHHHHHHHHHHcCCCcEEEEEc
Confidence 999986431 12 2567889999999988776544
No 470
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.85 E-value=0.0088 Score=59.54 Aligned_cols=74 Identities=20% Similarity=0.329 Sum_probs=48.5
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHHHhcCCCEE-EecCHHHHhh
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSD-QLPIYEPGLEEVVKQCRGKNLF-FSTDVEKHVR 77 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g-~~~~~e~~l~~~~~~~~~~~l~-~t~d~~~a~~ 77 (480)
||+|.|.| .|++|..++..|.++ +|++|++++++++..+.+... ...+.. +.+. -..++.++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~------------~Dl~~d~~~~~~~~~ 90 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVKHERMHFFE------------GDITINKEWVEYHVK 90 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGGSTTEEEEE------------CCTTTCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhccCCCeEEEe------------CccCCCHHHHHHHhc
Confidence 57899999 699999999999875 379999999987665444321 100000 1110 0112344567
Q ss_pred cCCEEEEEcc
Q 011650 78 EANIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||-|..
T Consensus 91 ~~d~Vih~A~ 100 (372)
T 3slg_A 91 KCDVILPLVA 100 (372)
T ss_dssp HCSEEEECBC
T ss_pred cCCEEEEcCc
Confidence 8999998764
No 471
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.84 E-value=0.022 Score=56.05 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=30.6
Q ss_pred CceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
+|+|.|.| .|++|..++..|.++ |++|++++++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 59 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFS 59 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCC
Confidence 37899999 599999999999998 99999999953
No 472
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.84 E-value=0.035 Score=47.45 Aligned_cols=90 Identities=11% Similarity=0.140 Sum_probs=63.2
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChh-HHHhhhhcccCCCCCCCCCCCCCCCCcCceEE
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQE-HIQRDLQMNKFDWDHPIHLQPTSPSTINQVIV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+++|+|+|.. .-+..+++.|.+.|++|.++|...... .+...++ -.+..
T Consensus 21 ~~~v~iiG~G----------~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------------------~~~~~ 70 (144)
T 3oj0_A 21 GNKILLVGNG----------MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------------------YEYVL 70 (144)
T ss_dssp CCEEEEECCS----------HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------------------CEEEE
T ss_pred CCEEEEECCC----------HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------------------CceEe
Confidence 7899999963 367889999999999999999864432 2222221 12334
Q ss_pred ecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCC
Q 011650 403 ASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRN 448 (480)
Q Consensus 403 ~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.++++++++++|+||.+|+.+..- ++. +.+++..+|+|.-.
T Consensus 71 ~~~~~~~~~~~Divi~at~~~~~~-~~~----~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 71 INDIDSLIKNNDVIITATSSKTPI-VEE----RSLMPGKLFIDLGN 111 (144)
T ss_dssp CSCHHHHHHTCSEEEECSCCSSCS-BCG----GGCCTTCEEEECCS
T ss_pred ecCHHHHhcCCCEEEEeCCCCCcE-eeH----HHcCCCCEEEEccC
Confidence 568889999999999999976432 222 34455678999854
No 473
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.83 E-value=0.26 Score=42.80 Aligned_cols=114 Identities=13% Similarity=0.154 Sum_probs=66.6
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHHh----h
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKHV----R 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~----~ 77 (480)
++|.-+|+|. |. ++..+++..++.+|+++|++++.++..++.... .++ ..++.+..|..+.+ .
T Consensus 27 ~~vldiG~G~-G~-~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~---~~~--------~~~~~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 27 ETLWDIGGGS-GS-IAIEWLRSTPQTTAVCFEISEERRERILSNAIN---LGV--------SDRIAVQQGAPRAFDDVPD 93 (178)
T ss_dssp EEEEEESTTT-TH-HHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT---TTC--------TTSEEEECCTTGGGGGCCS
T ss_pred CeEEEeCCCC-CH-HHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH---hCC--------CCCEEEecchHhhhhccCC
Confidence 3688999997 44 345556554578999999999988876642000 000 11333334432223 4
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
..|+|++.-+.. . ...++.+...++++..++.. +........+...+++.+
T Consensus 94 ~~D~i~~~~~~~----------~------~~~l~~~~~~L~~gG~l~~~-~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 94 NPDVIFIGGGLT----------A------PGVFAAAWKRLPVGGRLVAN-AVTVESEQMLWALRKQFG 144 (178)
T ss_dssp CCSEEEECC-TT----------C------TTHHHHHHHTCCTTCEEEEE-ECSHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCccc----------H------HHHHHHHHHhcCCCCEEEEE-eeccccHHHHHHHHHHcC
Confidence 589998664321 0 34577788889987776653 333444445556666543
No 474
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.81 E-value=0.018 Score=59.76 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=31.5
Q ss_pred CceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|++|.|||.|.-|++.|..|+++ |++|++++.+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~--G~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA--GIPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT--TCCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHC--CCcEEEEccCC
Confidence 78999999999999999999998 99999999864
No 475
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.81 E-value=0.012 Score=58.86 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.3
Q ss_pred CceEEEECC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 011650 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVPR 38 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
||+|.|.|. |++|..++..|++. |++|+++++++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 65 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNE 65 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCS
T ss_pred CCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCcc
Confidence 578999997 99999999999998 9999999997643
No 476
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.77 E-value=0.073 Score=50.33 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=32.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~ 43 (480)
.+|.|||+|.+|..+|..|+.. |. +++++|.+.-....++
T Consensus 29 ~~VlvvG~GglG~~va~~La~~--Gvg~i~lvD~d~v~~sNL~ 69 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA--GVGTLVLADDDDVHLSNLQ 69 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCSEEEEECCCBCCGGGTT
T ss_pred CcEEEEccCHHHHHHHHHHHHc--CCCeEEEEeCCCcccccCC
Confidence 4799999999999999999998 65 7899998753333333
No 477
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.74 E-value=0.064 Score=49.31 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=65.8
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEe
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVA 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|... -+..+++.|.+.|.+|.++|+... .. ..+. ..++...
T Consensus 28 ~~~I~iiG~G~----------~G~~la~~l~~~g~~V~~~~r~~~--~~-~~~~-------------------~~g~~~~ 75 (215)
T 2vns_A 28 APKVGILGSGD----------FARSLATRLVGSGFKVVVGSRNPK--RT-ARLF-------------------PSAAQVT 75 (215)
T ss_dssp -CCEEEECCSH----------HHHHHHHHHHHTTCCEEEEESSHH--HH-HHHS-------------------BTTSEEE
T ss_pred CCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCCHH--HH-HHHH-------------------HcCCcee
Confidence 45899999643 688899999999999999998532 22 1221 0123444
Q ss_pred cChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChHH
Q 011650 404 SDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEK 454 (480)
Q Consensus 404 ~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~ 454 (480)
++.++++++|+|++++....++++- + +.... +..+|+|..+-+....
T Consensus 76 -~~~~~~~~~DvVi~av~~~~~~~v~-~-l~~~~-~~~~vv~~s~g~~~~~ 122 (215)
T 2vns_A 76 -FQEEAVSSPEVIFVAVFREHYSSLC-S-LSDQL-AGKILVDVSNPTEQEH 122 (215)
T ss_dssp -EHHHHTTSCSEEEECSCGGGSGGGG-G-GHHHH-TTCEEEECCCCCHHHH
T ss_pred -cHHHHHhCCCEEEECCChHHHHHHH-H-HHHhc-CCCEEEEeCCCccccc
Confidence 6788899999999999976665532 1 43334 3459999999886543
No 478
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.74 E-value=0.037 Score=53.16 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=65.5
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|++ ..-...+++.|.+.|.+|.+||+.....+....+ ++.. .
T Consensus 12 m~I~iIG~t---------G~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----------------------g~~~-~ 59 (286)
T 3c24_A 12 KTVAILGAG---------GKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM----------------------GIPL-T 59 (286)
T ss_dssp CEEEEETTT---------SHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT----------------------TCCC-C
T ss_pred CEEEEECCC---------CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc----------------------CCCc-C
Confidence 489999961 2378899999999999999999853321111111 1222 2
Q ss_pred ChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCChH
Q 011650 405 DAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVE 453 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~ 453 (480)
+..++++++|+|+++++.+..++. .+++...+++..+|+|+.+..+.+
T Consensus 60 ~~~~~~~~aDvVi~av~~~~~~~v-~~~l~~~l~~~~ivv~~s~~~~~~ 107 (286)
T 3c24_A 60 DGDGWIDEADVVVLALPDNIIEKV-AEDIVPRVRPGTIVLILDAAAPYA 107 (286)
T ss_dssp CSSGGGGTCSEEEECSCHHHHHHH-HHHHGGGSCTTCEEEESCSHHHHH
T ss_pred CHHHHhcCCCEEEEcCCchHHHHH-HHHHHHhCCCCCEEEECCCCchhH
Confidence 566788999999999998775442 245555566566999987765433
No 479
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.71 E-value=0.029 Score=53.96 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=63.1
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceEEec
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVAS 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+. .-+..+++.|.+.|.+|.+|| .....+.... .++....
T Consensus 4 m~i~iiG~G----------~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~----------------------~g~~~~~ 50 (295)
T 1yb4_A 4 MKLGFIGLG----------IMGSPMAINLARAGHQLHVTT-IGPVADELLS----------------------LGAVNVE 50 (295)
T ss_dssp CEEEECCCS----------TTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT----------------------TTCBCCS
T ss_pred CEEEEEccC----------HHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH----------------------cCCcccC
Confidence 489999974 478899999999999999999 5433221111 1244567
Q ss_pred ChhhhcccCcEEEEeecCcc-cccccH--HHHHhhcCCCCEEEEcCCCC
Q 011650 405 DAYEATKDSHGVCILTEWDE-FKNLDY--QKIYNNMQKPAFVFDGRNIL 450 (480)
Q Consensus 405 ~~~~a~~~~d~~vi~~~~~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~ 450 (480)
++.++++++|+|+++++.+. .+..-. +.+...+++..+|+|..+..
T Consensus 51 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 51 TARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp SHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCC
T ss_pred CHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCC
Confidence 88898999999999997764 222110 02223455566899998874
No 480
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=94.67 E-value=0.16 Score=48.72 Aligned_cols=89 Identities=10% Similarity=0.084 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCC
Q 011650 307 KTRFVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHP 386 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~ 386 (480)
|.-+++ +++..+.++.+++|.|+|.+- .-...++..|.+.|+.|.+.+-.
T Consensus 143 p~gi~~-ll~~~~i~l~gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~-------------------- 192 (288)
T 1b0a_A 143 PRGIVT-LLERYNIDTFGLNAVVIGASN---------IVGRPMSMELLLAGCTTTVTHRF-------------------- 192 (288)
T ss_dssp HHHHHH-HHHHTTCCCTTCEEEEECCCT---------TTHHHHHHHHHTTTCEEEEECSS--------------------
T ss_pred HHHHHH-HHHHcCCCCCCCEEEEECCCh---------HHHHHHHHHHHHCCCeEEEEeCC--------------------
Confidence 333444 334455678999999999632 24788999999999999998621
Q ss_pred CCCCCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcC
Q 011650 387 IHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGR 447 (480)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
..++.+.++.||.||.++..+.|-.-+| .++..+|||.-
T Consensus 193 ----------------t~~L~~~~~~ADIVI~Avg~p~lI~~~~------vk~GavVIDVg 231 (288)
T 1b0a_A 193 ----------------TKNLRHHVENADLLIVAVGKPGFIPGDW------IKEGAIVIDVG 231 (288)
T ss_dssp ----------------CSCHHHHHHHCSEEEECSCCTTCBCTTT------SCTTCEEEECC
T ss_pred ----------------chhHHHHhccCCEEEECCCCcCcCCHHH------cCCCcEEEEcc
Confidence 1356788999999999999998744333 35667999975
No 481
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.67 E-value=0.021 Score=56.07 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=31.4
Q ss_pred CceEEEECCChhHHHHHHHHHH---cCCCCeEEEEeCCH
Q 011650 1 MVKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~---~~~G~~V~~~D~~~ 36 (480)
|++|+|||.|..|+.+|..|++ . |++|+++|.+.
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCC
Confidence 6789999999999999999999 7 99999999864
No 482
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.65 E-value=0.052 Score=52.01 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=72.0
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+++++|+|+|.. ..+..++..|.+.|++|.++|+.... . ..+. ..-++
T Consensus 126 ~~~~~~v~iiGaG----------~~g~aia~~L~~~g~~V~v~~r~~~~--~-~~l~------------------~~~g~ 174 (275)
T 2hk9_A 126 EVKEKSILVLGAG----------GASRAVIYALVKEGAKVFLWNRTKEK--A-IKLA------------------QKFPL 174 (275)
T ss_dssp TGGGSEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSSHHH--H-HHHT------------------TTSCE
T ss_pred CcCCCEEEEECch----------HHHHHHHHHHHHcCCEEEEEECCHHH--H-HHHH------------------HHcCC
Confidence 4578899999953 47788999999999999999986432 1 1121 00124
Q ss_pred EEecChhhhcccCcEEEEeecCcccccccHHHH-HhhcCCCCEEEEcCCCCCh---HHHhhcCcEE
Q 011650 401 IVASDAYEATKDSHGVCILTEWDEFKNLDYQKI-YNNMQKPAFVFDGRNILDV---EKLRKIGFIV 462 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~-~~~~~~~~~i~D~~~~~~~---~~~~~~g~~y 462 (480)
...+++.++++++|+||++|+-..+.+... .+ ...+++..+|+|.-. ... +..++.|.++
T Consensus 175 ~~~~~~~~~~~~aDiVi~atp~~~~~~~~~-~i~~~~l~~g~~viDv~~-~~t~ll~~a~~~g~~~ 238 (275)
T 2hk9_A 175 EVVNSPEEVIDKVQVIVNTTSVGLKDEDPE-IFNYDLIKKDHVVVDIIY-KETKLLKKAKEKGAKL 238 (275)
T ss_dssp EECSCGGGTGGGCSEEEECSSTTSSTTCCC-SSCGGGCCTTSEEEESSS-SCCHHHHHHHHTTCEE
T ss_pred eeehhHHhhhcCCCEEEEeCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC-ChHHHHHHHHHCcCEE
Confidence 455577888999999999999876532110 01 234555669999988 442 2334567765
No 483
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=93.65 E-value=0.0058 Score=55.94 Aligned_cols=93 Identities=12% Similarity=0.035 Sum_probs=63.6
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCceE
Q 011650 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVI 401 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
+.+.+|+|+|+. +-+..+++.|.+.|.+|.+||+....+. +. ..++.
T Consensus 17 ~~~~~I~iIG~G----------~mG~~la~~L~~~G~~V~~~~r~~~~~~----~~-------------------~~g~~ 63 (201)
T 2yjz_A 17 EKQGVVCIFGTG----------DFGKSLGLKMLQCGYSVVFGSRNPQVSS----LL-------------------PRGAE 63 (201)
Confidence 345689999963 4677788899999999999998643111 10 01233
Q ss_pred EecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCCCC
Q 011650 402 VASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 402 ~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
.. ++.++++++|+|+++++...++++- .+.. +.+..+|||..+-++
T Consensus 64 ~~-~~~~~~~~aDvVilav~~~~~~~v~--~l~~-~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 64 VL-CYSEAASRSDVIVLAVHREHYDFLA--ELAD-SLKGRVLIDVSNNQK 109 (201)
Confidence 33 6778889999999999987766542 3333 223458999988774
No 484
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.63 E-value=0.13 Score=50.75 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=31.0
Q ss_pred ceEEEECCChhHHHHHHHHHH---cCCCCeEEEEe-C-CHHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVD-I-SVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~---~~~G~~V~~~D-~-~~~~v~~l~ 43 (480)
+||+|+|.|++|..+...|.. + +..+|.++. + +++....+-
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~-~~~eivai~~~~~~~~~~~ll 48 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLL 48 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGG-GTEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCC-CCEEEEEEeCCCCHHHHHHHh
Confidence 699999999999999999887 4 467877654 3 455555544
No 485
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.59 E-value=0.075 Score=52.29 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=26.2
Q ss_pred ceEEEECCChhHHHHHHHHHHc-----CCCCeEEE-EeCCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALK-----CPSIEVAV-VDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~-----~~G~~V~~-~D~~~ 36 (480)
+||+|||+|.||..++..|.++ +++.+|++ .|+++
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~ 45 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRS 45 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSB
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecCh
Confidence 4799999999999999999763 13556665 46654
No 486
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.55 E-value=0.12 Score=50.93 Aligned_cols=42 Identities=21% Similarity=0.373 Sum_probs=31.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcC-CCCeEEEE-eC-CHHHHHHHH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKC-PSIEVAVV-DI-SVPRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-~G~~V~~~-D~-~~~~v~~l~ 43 (480)
+||||+|.|++|.-+...|..+. |.++|..+ |+ +.+....+-
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll 45 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL 45 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhc
Confidence 48999999999999999888752 46888765 43 455554443
No 487
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.55 E-value=0.21 Score=47.95 Aligned_cols=81 Identities=14% Similarity=0.140 Sum_probs=61.4
Q ss_pred HHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCC
Q 011650 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPS 395 (480)
Q Consensus 316 ~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+..+.++++++|.|+|.+ +.-...++..|.+.|+.|.+.+-.
T Consensus 152 ~~~~i~l~Gk~vvVvGrs---------~iVG~p~A~lL~~~gAtVtv~h~~----------------------------- 193 (285)
T 3p2o_A 152 KAYEIDLEGKDAVIIGAS---------NIVGRPMATMLLNAGATVSVCHIK----------------------------- 193 (285)
T ss_dssp HHTTCCCTTCEEEEECCC---------TTTHHHHHHHHHHTTCEEEEECTT-----------------------------
T ss_pred HHhCCCCCCCEEEEECCC---------chHHHHHHHHHHHCCCeEEEEeCC-----------------------------
Confidence 334457899999999952 135889999999999999997532
Q ss_pred CcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcC
Q 011650 396 TINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGR 447 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
..++.+.++.||.||.+|..+.|-.- +.+++..+|||.-
T Consensus 194 -------t~~L~~~~~~ADIVI~Avg~p~~I~~------~~vk~GavVIDVg 232 (285)
T 3p2o_A 194 -------TKDLSLYTRQADLIIVAAGCVNLLRS------DMVKEGVIVVDVG 232 (285)
T ss_dssp -------CSCHHHHHTTCSEEEECSSCTTCBCG------GGSCTTEEEEECC
T ss_pred -------chhHHHHhhcCCEEEECCCCCCcCCH------HHcCCCeEEEEec
Confidence 13567889999999999999987432 2345667899974
No 488
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.54 E-value=0.28 Score=50.81 Aligned_cols=110 Identities=13% Similarity=0.149 Sum_probs=70.8
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhC-CC-eEEEECCCCC----hhHHHhhhhcccCCCCCCCC-CCCCCCC-
Q 011650 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLMGD-KA-RLSIYDPQVP----QEHIQRDLQMNKFDWDHPIH-LQPTSPS- 395 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~-g~-~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 395 (480)
-.||+|+|+.| -.+.++..|.+. |. +|.+||..-. .-+ .+.. + ..|++ ..+....
T Consensus 18 ~mkIaVIGlG~----------mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~---~l~~-g---~~~i~~~e~gl~~l 80 (478)
T 3g79_A 18 IKKIGVLGMGY----------VGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIE---MLNR-G---ESPLKGEEPGLEEL 80 (478)
T ss_dssp CCEEEEECCST----------THHHHHHHHHHSTTCCEEEEECCCCTTTTTHHH---HHTT-T---CCCSSCCGGGHHHH
T ss_pred CCEEEEECcCH----------HHHHHHHHHHHhCCCCeEEEEECChhHhHHHHH---HHHh-c---CCCccccCCCHHHH
Confidence 46999999987 899999999999 99 9999998755 321 1110 0 00100 0000000
Q ss_pred -----CcCceEEecChhhhcccCcEEEEeecCccccc----cc-------HHHHHhhcCCCCEEEEcCCCCC
Q 011650 396 -----TINQVIVASDAYEATKDSHGVCILTEWDEFKN----LD-------YQKIYNNMQKPAFVFDGRNILD 451 (480)
Q Consensus 396 -----~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~----~~-------~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
....+.+.++ .+++++||++|++++-+.-.+ .| .+.+...+++..+|||...+..
T Consensus 81 ~~~~~~~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p 151 (478)
T 3g79_A 81 IGKVVKAGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP 151 (478)
T ss_dssp HHHHHHTTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred HHhhcccCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence 0234666666 789999999999987663111 22 2456677777789999876654
No 489
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.53 E-value=0.14 Score=49.42 Aligned_cols=120 Identities=11% Similarity=0.106 Sum_probs=69.3
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHh-----hhh---cccCCCCC-CCCCCCCCCC
Q 011650 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQR-----DLQ---MNKFDWDH-PIHLQPTSPS 395 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~-----~~~---~~~~~~~~-~~~~~~~~~~ 395 (480)
++|+|+|+.. ....++..|.+.|++|.+||+.-...+... .+. ..+.-... |.+. ....
T Consensus 16 ~~I~VIG~G~----------mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~--~~~~ 83 (302)
T 1f0y_A 16 KHVTVIGGGL----------MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDE--FVEK 83 (302)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHH--HHHH
T ss_pred CEEEEECCCH----------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchh--hHHH
Confidence 5899999754 788999999999999999998633211100 000 00000000 0000 0000
Q ss_pred CcCceEEecChhhhcccCcEEEEeecCcc-cccccHHHHHhhcCCCCEEEEcCCCCChHHHh
Q 011650 396 TINQVIVASDAYEATKDSHGVCILTEWDE-FKNLDYQKIYNNMQKPAFVFDGRNILDVEKLR 456 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~~d~~vi~~~~~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
....++..+++.++++++|.||+++.-+. .+.--++++...+++..+|+....-++...+.
T Consensus 84 ~~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~ 145 (302)
T 1f0y_A 84 TLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIA 145 (302)
T ss_dssp HHHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHH
T ss_pred HHhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHH
Confidence 01246777888889999999999996542 12112334555555555777776666665553
No 490
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.52 E-value=0.27 Score=48.60 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.0
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHH
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVPRI 39 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v 39 (480)
|+|.|.| .|.+|..++..|+++ |++|++++++++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~ 42 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGL 42 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChh
Confidence 5799999 599999999999998 99999999987654
No 491
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.42 E-value=0.15 Score=51.65 Aligned_cols=132 Identities=12% Similarity=0.013 Sum_probs=76.4
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCC-CCCCCCC--CCCCc-
Q 011650 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDH-PIHLQPT--SPSTI- 397 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~- 397 (480)
+.+.+|+|+|.. .-.+..++.|...|++|.+||+.....+....++.. +-. +....+. ..+.+
T Consensus 188 v~~~kV~ViG~G----------~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~---~~~~~~~~~~d~~~~~~ya 254 (405)
T 4dio_A 188 VPAAKIFVMGAG----------VAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAK---FIAVEDEEFKAAETAGGYA 254 (405)
T ss_dssp ECCCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCE---ECCCCC-------------
T ss_pred cCCCEEEEECCc----------HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCc---eeecccccccccccccchh
Confidence 467899999963 478899999999999999999987654333333310 000 0000000 00000
Q ss_pred CceE------EecChhhhcccCcEEEEeecCcccc--cccHHHHHhhcCCCCEEEEcC----CCCCh----HHHhhcCcE
Q 011650 398 NQVI------VASDAYEATKDSHGVCILTEWDEFK--NLDYQKIYNNMQKPAFVFDGR----NILDV----EKLRKIGFI 461 (480)
Q Consensus 398 ~~~~------~~~~~~~a~~~~d~~vi~~~~~~~~--~~~~~~~~~~~~~~~~i~D~~----~~~~~----~~~~~~g~~ 461 (480)
..++ -..++.++++++|+||-.+-.|.=+ .+=.++..+.|++..+|||.- +.++- +.....|+.
T Consensus 255 ~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~ 334 (405)
T 4dio_A 255 KEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVR 334 (405)
T ss_dssp ----CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEE
T ss_pred hhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEE
Confidence 0000 0136788999999998764333211 122356778899888999986 34432 112235777
Q ss_pred EEEec
Q 011650 462 VYSIG 466 (480)
Q Consensus 462 y~~iG 466 (480)
++|+-
T Consensus 335 ~~gv~ 339 (405)
T 4dio_A 335 IVGHL 339 (405)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 76664
No 492
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.39 E-value=0.29 Score=50.83 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=70.9
Q ss_pred CCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCCCCCCCCCCCcCce
Q 011650 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPIHLQPTSPSTINQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.++|+..........++ .
T Consensus 271 ~l~GktV~IiG~G----------~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G----------------------a 318 (494)
T 3ce6_A 271 LIGGKKVLICGYG----------DVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG----------------------F 318 (494)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----------------------C
T ss_pred CCCcCEEEEEccC----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC----------------------C
Confidence 5689999999963 3678899999999999999999654422222222 2
Q ss_pred EEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcCCC---CChHHHh
Q 011650 401 IVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNI---LDVEKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~ 456 (480)
.+ .+++++++++|+|+.+|.-+.. ++ .+..+.|++.++|++.-.. ++...+.
T Consensus 319 ~~-~~l~e~l~~aDvVi~atgt~~~--i~-~~~l~~mk~ggilvnvG~~~~eId~~aL~ 373 (494)
T 3ce6_A 319 DV-VTVEEAIGDADIVVTATGNKDI--IM-LEHIKAMKDHAILGNIGHFDNEIDMAGLE 373 (494)
T ss_dssp EE-CCHHHHGGGCSEEEECSSSSCS--BC-HHHHHHSCTTCEEEECSSSGGGBCHHHHH
T ss_pred EE-ecHHHHHhCCCEEEECCCCHHH--HH-HHHHHhcCCCcEEEEeCCCCCccCHHHHH
Confidence 32 3677889999999999876653 33 3456778887889887652 4554443
No 493
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=94.36 E-value=0.11 Score=49.37 Aligned_cols=108 Identities=10% Similarity=0.022 Sum_probs=69.6
Q ss_pred CCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCCh-hHHHhhhhcccCCCCCCCCCCCCCCCCcC
Q 011650 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQ-EHIQRDLQMNKFDWDHPIHLQPTSPSTIN 398 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
.++++ +|+|+|.. ..+..+++.|.+.|++|.++|+.... +.+...++
T Consensus 113 ~~l~~-~v~iiG~G----------~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~--------------------- 160 (263)
T 2d5c_A 113 IPLKG-PALVLGAG----------GAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG--------------------- 160 (263)
T ss_dssp CCCCS-CEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---------------------
T ss_pred CCCCC-eEEEECCc----------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------------------
Confidence 35788 99999963 37788999999999999999986433 22222221
Q ss_pred ceEEecChhhhcccCcEEEEeecCcccccccHHHH-HhhcCCCCEEEEcCCCCCh----HHHhhcCcEEE
Q 011650 399 QVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKI-YNNMQKPAFVFDGRNILDV----EKLRKIGFIVY 463 (480)
Q Consensus 399 ~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~-~~~~~~~~~i~D~~~~~~~----~~~~~~g~~y~ 463 (480)
.. .+++.++ +++|+||++|+...+.+.+ ..+ .+.+++..+|+|.-..... +.+++.|.++.
T Consensus 161 -~~-~~~~~~~-~~~Divi~~tp~~~~~~~~-~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 161 -LR-AVPLEKA-REARLLVNATRVGLEDPSA-SPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQ 226 (263)
T ss_dssp -CE-ECCGGGG-GGCSEEEECSSTTTTCTTC-CSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCEEE
T ss_pred -cc-hhhHhhc-cCCCEEEEccCCCCCCCCC-CCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCEEE
Confidence 12 3467777 8999999999987543211 001 2445556689997653221 23345677653
No 494
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.25 E-value=0.027 Score=56.65 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=24.7
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEE
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVV 32 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~ 32 (480)
+||+||| .||+|.-+...|.++ |..++..+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h-p~~el~~l 50 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH-PEFEIHAL 50 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHcC-CCceEEEe
Confidence 5799999 699999999988875 56677544
No 495
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.23 E-value=0.31 Score=46.69 Aligned_cols=88 Identities=14% Similarity=0.132 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCeEEEECCCCChhHHHhhhhcccCCCCCCC
Q 011650 308 TRFVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPQEHIQRDLQMNKFDWDHPI 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
.-+++ +.+..+.++++++|.|+|.+ +.-...++..|.+.|+.|.+.+-.
T Consensus 146 ~gv~~-lL~~~~i~l~Gk~vvVIG~s---------~iVG~p~A~lL~~~gAtVtv~hs~--------------------- 194 (285)
T 3l07_A 146 KGIMT-MLREYGIKTEGAYAVVVGAS---------NVVGKPVSQLLLNAKATVTTCHRF--------------------- 194 (285)
T ss_dssp HHHHH-HHHHTTCCCTTCEEEEECCC---------TTTHHHHHHHHHHTTCEEEEECTT---------------------
T ss_pred HHHHH-HHHHhCCCCCCCEEEEECCC---------chhHHHHHHHHHHCCCeEEEEeCC---------------------
Confidence 33433 33444567899999999952 135889999999999999986421
Q ss_pred CCCCCCCCCcCceEEecChhhhcccCcEEEEeecCcccccccHHHHHhhcCCCCEEEEcC
Q 011650 388 HLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGR 447 (480)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~a~~~~d~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
..++.+.++.||.||.+|..+.|- +. +.+++..+|||.-
T Consensus 195 ---------------t~~L~~~~~~ADIVI~Avg~p~~I--~~----~~vk~GavVIDvg 233 (285)
T 3l07_A 195 ---------------TTDLKSHTTKADILIVAVGKPNFI--TA----DMVKEGAVVIDVG 233 (285)
T ss_dssp ---------------CSSHHHHHTTCSEEEECCCCTTCB--CG----GGSCTTCEEEECC
T ss_pred ---------------chhHHHhcccCCEEEECCCCCCCC--CH----HHcCCCcEEEEec
Confidence 135678899999999999999874 32 2345667999985
No 496
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.22 E-value=0.046 Score=52.42 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.3
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|+|.|||+|.+|..-+..|.+. |++|++++.+.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~--Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCC
Confidence 5799999999999999999998 99999998754
No 497
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.18 E-value=0.5 Score=45.79 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=30.7
Q ss_pred ceEEEEC-CChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 011650 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVP 37 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~ 37 (480)
|+|.|.| +|++|..++..|+++ |++|+++.++++
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~ 44 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPD 44 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTT
T ss_pred CEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcc
Confidence 6799998 799999999999998 999999888754
No 498
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=94.17 E-value=0.024 Score=56.25 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=24.7
Q ss_pred ceEEEEC-CChhHHHHHHHHHHc-CCCCeEEEEe
Q 011650 2 VKICCIG-AGYVGGPTMAVIALK-CPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~-~~G~~V~~~D 33 (480)
|||+||| .||+|.-+...|..+ +|..++..+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 6999999 799999999998876 1333455554
No 499
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.16 E-value=0.71 Score=41.26 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=69.0
Q ss_pred ceEEEECCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEE-ecCHHHH---hh
Q 011650 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFF-STDVEKH---VR 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a---~~ 77 (480)
.+|.-||+|. |. ++..+++.+++.+|+++|++++.++..++.. +.....++++ ..|..+. ..
T Consensus 42 ~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 42 LVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNPQYLGFIRDNL------------KKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp CEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCHHHHHHHHHHH------------HHHTCTTEEEEECCTTTTCTTSC
T ss_pred CEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH------------HHhCCCcEEEEeCChhhhhhcCC
Confidence 3688999996 54 4555666644589999999999988776420 0000023332 2333221 24
Q ss_pred cCCEEEEEccCCCCcCCCCCCCCCchHHHHHHHHHHHhhCCCCcEEEEecCCCcccHHHHHHHHHhhc
Q 011650 78 EANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILMHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
..|+|+..-+.. + ....++.+...++++..++.. +....+.+.+.+.+++.+
T Consensus 108 ~~D~i~~~~~~~------------~---~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 108 DPDRVFIGGSGG------------M---LEEIIDAVDRRLKSEGVIVLN-AVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp CCSEEEESCCTT------------C---HHHHHHHHHHHCCTTCEEEEE-ECBHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCCc------------C---HHHHHHHHHHhcCCCeEEEEE-ecccccHHHHHHHHHHCC
Confidence 689988764321 1 356788888899987776553 233345556666676653
No 500
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.16 E-value=0.031 Score=56.04 Aligned_cols=70 Identities=19% Similarity=0.236 Sum_probs=40.1
Q ss_pred CceEEEEC-CChhHHHHHH-HHHHcCCCC---eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHHHhcCCCEEEecCHHHH
Q 011650 1 MVKICCIG-AGYVGGPTMA-VIALKCPSI---EVAVVDISVPRINAWNSDQLPIYEPGLEEVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~-~La~~~~G~---~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
||||+|+| .|++|.-+.. .|.++ ++ ++..+..+. .|. ++. .+. . ..-.+.-..++++
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~--~~~~v~i~~~~~~s-------~G~-~v~--~~~----g-~~i~~~~~~~~~~- 62 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER--DFDAIRPVFFSTSQ-------LGQ-AAP--SFG----G-TTGTLQDAFDLEA- 62 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--GGGGSEEEEEESSS-------TTS-BCC--GGG----T-CCCBCEETTCHHH-
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC--CCCeEEEEEEEeCC-------CCC-Ccc--ccC----C-CceEEEecCChHH-
Confidence 78999999 9999999999 55543 33 445544321 111 110 000 0 0011222234555
Q ss_pred hhcCCEEEEEccC
Q 011650 76 VREANIVFVSVNT 88 (480)
Q Consensus 76 ~~~aDvVii~Vpt 88 (480)
+.++|+||.|+|.
T Consensus 63 ~~~~DvVf~a~g~ 75 (367)
T 1t4b_A 63 LKALDIIVTCQGG 75 (367)
T ss_dssp HHTCSEEEECSCH
T ss_pred hcCCCEEEECCCc
Confidence 6899999999873
Done!