BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011652
(480 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/468 (73%), Positives = 410/468 (87%), Gaps = 2/468 (0%)
Query: 15 CISFL--RRYNSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEK 72
C SFL R Y+SSE + D AK+ISK+++SSP++VLD+ALDQSG+RVS E+VEDVL +
Sbjct: 50 CKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNR 109
Query: 73 FRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVE 132
FRNAG L + FF+W+EKQ++YEHSVRAYH MIES AKIRQY++MWDL+NAMR K+MLNVE
Sbjct: 110 FRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVE 169
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
TFCI+MRKYAR QKV+EA+Y FNVM+KY + NL AFNGLLSALCKSKNVRKAQE+F+ M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 193 KDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVD 252
+DRF PDSKTYSILLEGWGK+PNLP+ARE+FREM+D GC+PDIVTY IMVD+LCKAGRVD
Sbjct: 230 RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 253 EALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALI 312
EALGIV+SMD ++C+PT+FIYSVLVHTYG ENR+E+AVDTFLEME++G+ ADVA++N+LI
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 313 GAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEA 372
GAFCKAN+ KNVYRVLK+M SKGV PNS++CNIIL LI RGE DEA+ VFR+MIK+CE
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP 409
Query: 373 DADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLL 432
DADTYTM+IKMFC+ E+E A KVWKYM+ K PSMHTFSVLINGLC++ +CVLL
Sbjct: 410 DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLL 469
Query: 433 EDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEPLCD 480
E+MIE GIRPSG TFG+LR+LLIKE REDVLKFL EKMN+LV EPLCD
Sbjct: 470 EEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPLCD 517
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/460 (40%), Positives = 292/460 (63%), Gaps = 6/460 (1%)
Query: 23 NSSEPSTEALDA---AKSISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTL 79
+S E A DA A+ I KI+ ++T L+++ +++SP ++E+VL+K NAG L
Sbjct: 51 SSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVL 110
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMR 139
A FKWAE Q+ ++H+ Y+++IESL KI+Q++++W LV+ M+ K++L+ ETF +I R
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISR 170
Query: 140 KYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKD-RFIP 198
+YAR +KV+EA+ F+ M+++G + FN +L L KS+NV AQ++FD MK RF P
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 199 DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIV 258
D K+Y+ILLEGWG++ NL R E+ REM D G PD+V YGI+++ CKA + +EA+
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 259 KSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKA 318
M+ C+P+ I+ L++ G E ++ DA++ F + +G + YNAL+GA+C +
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 319 NKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADADTYT 378
+ ++ Y+ + +M KGV PN+RT +IIL+ LI + EAY V++ M CE TY
Sbjct: 351 QRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS--CEPTVSTYE 408
Query: 379 MMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEK 438
+M++MFC L+ A K+W MK K +P MH FS LI LC + + ++C +M++
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 439 GIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEPL 478
GIRP G F +L++ L+ EGR+D + L KM+ L K L
Sbjct: 469 GIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQL 508
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 237/445 (53%), Gaps = 7/445 (1%)
Query: 33 DAAKSISKIMLS--SPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQ 90
D IS+++ +PK L+ L RVS +VE VL++ +N G A FF WA +
Sbjct: 36 DLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRI 95
Query: 91 QNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVET--FCIIMRKYARVQKVE 148
++ HS+ +YH ++E L +Q+ ++WD + R + + F I+ R Y+R
Sbjct: 96 PDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPS 155
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKD-RFIPDSKTYSILL 207
EA FN M ++G+ + + LL +LC K+V AQE F K +P +KTYSIL+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
GW + + AR++F EM++ C D++ Y ++D LCK+G VD + + M + +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P ++ +++ +H Y + A M++ ++ +V +N +I CK K + Y +
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
L +M KG P++ T N I+ E + A ++ RM + C D TY M++K+ +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLC-DKGIVSDSCVLLEDMIEKGIRPSGE 445
G ++A ++W+ M ++F P++ T++V+I+GL KG + ++C E MI++GI P
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYST 455
Query: 446 TFGKLRKLLIKEGREDVLKFLQEKM 470
T LR L+ G+ DV+ L KM
Sbjct: 456 TVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 9/277 (3%)
Query: 200 SKTYSILLEGWGKDPNLP-RAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIV 258
SK + I+ + + NLP A F MV+ G P + ++ LC V+ A
Sbjct: 138 SKVFWIVFRAYSR-ANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 259 KSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDT---FLEMEKNGILADVAMYNALIGAF 315
P++ YS+LV + RI DA F EM + + D+ YNAL+ A
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWA---RIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 316 CKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADA 374
CK+ Y++ ++M + G+ P++ + I ++ G+ AY+V RM + +
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 375 DTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLED 434
T+ +IK C+ +++ A+ + M K P T++ ++ CD V+ + LL
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 435 MIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMN 471
M P T+ + KLLI+ GR D + E M+
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMS 410
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 248 bits (633), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 235/423 (55%), Gaps = 5/423 (1%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAK 109
L+ AL++SGI + P ++ VL + +AG L + FF WA KQ Y HS SM+ L+K
Sbjct: 84 LELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSK 143
Query: 110 IRQYQIMWDLVNAMR--TKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLA 167
+RQ+ +W L+ MR ++ E F ++MR++A V++AV + M KYG+ +
Sbjct: 144 MRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEY 203
Query: 168 AFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMV 227
F LL ALCK+ +V++A ++F+ M+++F P+ + ++ LL GW ++ L A+E+ +M
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 228 DTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTY-GVENRI 286
+ G PDIV + ++ AG++ +A ++ M P Y+VL+ E R+
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRM 323
Query: 287 EDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNII 346
++A+ F+EME+ G AD+ Y ALI FCK Y VL DM KGV P+ T I
Sbjct: 324 DEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQI 383
Query: 347 LNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRF 405
+ + + +E + +M + C D Y ++I++ C+ GE+++A ++W M+
Sbjct: 384 MVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Query: 406 IPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKF 465
P + TF ++ING +G + ++C ++M+ +GI S +G L+ LL R+D L+
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF-SAPQYGTLKSLLNNLVRDDKLEM 502
Query: 466 LQE 468
++
Sbjct: 503 AKD 505
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 239/421 (56%), Gaps = 1/421 (0%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAK 109
++ LD+ + +S +++ +VLE+FR+A AF FF WA ++Q + H R Y+SM+ LAK
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 110 IRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAF 169
RQ++ M ++ M TK +L +ETF I M+ +A ++ ++AV F +M+KY +
Sbjct: 208 TRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 267
Query: 170 NGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDT 229
N LL +L ++K ++AQ +FD +K+RF P+ TY++LL GW + NL A I+ +M+D
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 230 GCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDA 289
G PDIV + +M++ L ++ + +A+ + M S P Y++++ + ++ +E A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 290 VDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNG 349
++ F +M +G+ D A+Y LI F K VY +LK+M KG P+ +T N ++
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 350 LIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPS 408
+ + + A R++ +MI+ E T+ M++K + E VW+ M K P
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQE 468
++++VLI GL +G ++C LE+M++KG++ + K + G+ ++ + L +
Sbjct: 508 DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
Query: 469 K 469
+
Sbjct: 568 R 568
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 245 bits (625), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 234/439 (53%), Gaps = 9/439 (2%)
Query: 35 AKSISKIMLSSPKVVLDT---ALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQ 91
+ +I+K++LSSP L +P +V VL++ N G A FF + +
Sbjct: 25 SAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHH 84
Query: 92 -NYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEE 149
Y H ++ I+ A++ + +W L++ MR+ R+ + +TF I+ +YA K ++
Sbjct: 85 REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDK 144
Query: 150 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEG 209
AV F M ++G Q+LA+FN +L LCKSK V KA E+F ++ RF D+ TY+++L G
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNG 204
Query: 210 WGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPT 269
W P+A E+ +EMV+ G NP++ TY M+ +AG++ A M C
Sbjct: 205 WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264
Query: 270 SFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLK 329
Y+ +VH +GV I+ A + F EM + G+L VA YNA+I CK + +N + +
Sbjct: 265 VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324
Query: 330 DMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGG 388
+M +G PN T N+++ GL GE + +RM + CE + TY MMI+ + +
Sbjct: 325 EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384
Query: 389 ELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV---LLEDMIEKGIRPSGE 445
E+EKA +++ M +P++ T+++LI+G+ + D V LL +M+E+G P
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKF 444
Query: 446 TFGKLRKLLIKEGREDVLK 464
TF ++ L+ G + K
Sbjct: 445 TFNRVLNGLLLTGNQAFAK 463
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 42/347 (12%)
Query: 59 IRVSPEIVEDVLEKFRNAGTL--AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIM 116
I SP+ V E++ +AG A F + ++ + +++++++ L K ++ +
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ-DLASFNTILDVLCKSKRVEKA 180
Query: 117 WDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSAL 176
++L A+R + ++ T+ +I+ + +++ +A+ M + G+ NL +N +L
Sbjct: 181 YELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 177 CKSKNVRKAQEIFDCMKDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDI 235
++ +R A E F MK R D TY+ ++ G+G + RAR +F EM+ G P +
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 236 VTYGIMVDVLCKAGRVDEAL-----------------------------------GIVKS 260
TY M+ VLCK V+ A+ +++
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 261 MDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALI-GAFCKAN 319
M++ C P Y++++ Y + +E A+ F +M L ++ YN LI G F +
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Query: 320 KFKNVY--RVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFR 364
V ++L +M +G P T N +LNGL+ G A + R
Sbjct: 421 SEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILR 467
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 244 bits (624), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 238/421 (56%), Gaps = 1/421 (0%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAK 109
++ LD+ + +S +++ +VLE+FR+A AF FF WA ++Q + H+ R Y+SM+ LAK
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 110 IRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAF 169
RQ++ M ++ M TK +L +ETF I M+ +A ++ ++AV F +M+KY +
Sbjct: 208 TRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 267
Query: 170 NGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDT 229
N LL +L ++K ++AQ +FD +K+RF P+ TY++LL GW + NL A I+ +M+D
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 327
Query: 230 GCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDA 289
G PDIV + +M++ L ++ + +A+ + M S P Y++++ + ++ +E A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 290 VDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNG 349
++ F +M +G+ D A+Y LI F K VY +LK+M KG P+ +T N ++
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 350 LIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPS 408
+ + + R++ +MI+ E T+ M++K + E VW M K P
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQE 468
++++VLI GL +G ++C LE+M++KG++ + K + G+ ++ + L +
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
Query: 469 K 469
+
Sbjct: 568 R 568
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 237/421 (56%), Gaps = 1/421 (0%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAK 109
++ LD+ + +S +++ +VLE+FR+A AF FF WA ++Q + H R Y+SM+ LAK
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 110 IRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAF 169
RQ++ M ++ M TK +L +ETF I M+ +A ++ ++AV F +M+KY +
Sbjct: 207 TRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 266
Query: 170 NGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDT 229
N LL +L ++K ++AQ +FD +K+RF P+ TY++LL GW + NL A I+ +M+D
Sbjct: 267 NCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 326
Query: 230 GCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDA 289
G PDIV + +M++ L ++ + +A+ + M S P Y++++ + ++ +E A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 290 VDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNG 349
++ F +M +G+ D A+Y LI F K VY +LK+M KG P+ +T N ++
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 350 LIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPS 408
+ + + R++ +MI+ E T+ M++K + E VW M K P
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQE 468
++++VLI GL +G ++C LE+M++KG++ + K + G+ ++ + L +
Sbjct: 507 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 566
Query: 469 K 469
+
Sbjct: 567 R 567
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 218/399 (54%), Gaps = 8/399 (2%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAK 109
L L++ ++ S E+V ++L + RN AF FF WA KQQ Y SVR YHSMI L K
Sbjct: 114 LRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGK 173
Query: 110 IRQYQIMWDLVNAMR--TKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLA 167
+R++ W L++ MR + ++N +T I++RKY V V +A+ TF+ +++ + +
Sbjct: 174 MRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGID 233
Query: 168 AFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPR-AREIFREM 226
F LLSALC+ KNV A + C KD++ D+K+++I+L GW PR A ++ EM
Sbjct: 234 DFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEM 293
Query: 227 VDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRI 286
+ G D+V+Y M+ K G +++ L + M P +Y+ +VH + +
Sbjct: 294 GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 287 EDAVDTFLEMEKN-GILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNI 345
+A + ME+ GI +V YN+LI CKA K + +V +M KG+ P RT +
Sbjct: 354 SEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA 413
Query: 346 ILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKR 404
+ ++ GE E + + +M K+ CE +TY M+I+ C+ + + +W MK K
Sbjct: 414 FMR-ILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT 470
Query: 405 FIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPS 443
P + ++ V+I+GL G + ++ ++M +KG+RP+
Sbjct: 471 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 89 KQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML--NVETFCIIMRKYARVQK 146
K++ E + Y++++ +LAK +L+ M ++ + NV T+ +++ + +K
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 147 VEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFI---PDSKT 202
EEA F+ M + G+ + ++ + L R +E+F+ + K R + P +T
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTYHAFMRIL------RTGEEVFELLAKMRKMGCEPTVET 442
Query: 203 YSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMD 262
Y +L+ + + ++ EM + PD+ +Y +M+ L G+++EA G K M
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 263 STVCRPTSFIYSVLVHTYG----VENRIEDA 289
RP + ++ + E RI D+
Sbjct: 503 DKGMRPNENVEDMIQSWFSGKQYAEQRITDS 533
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 53/284 (18%)
Query: 238 YGIMVDVLCKAGRVDEALGIVKSM----DSTVCRPTSFIYSVLVHTYGVENRIEDAVDTF 293
Y M+ +L K + D A ++ M S V T I ++ Y + + A++TF
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLI---MIRKYCAVHDVGKAINTF 220
Query: 294 LEMEKNGILADVAMYNALIGAFCKANKFKNVYRV--LKDMNSKGVAPNSRTCNIILNGLI 351
++ + + + +L+ A C+ +KNV L N ++++ NI+LNG
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSALCR---YKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWC 277
Query: 352 GR-GETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKL------- 402
G EA RV+ M + + D +Y+ MI + +GG L K K++ MK
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 403 -----------------------------KRFIPSMHTFSVLINGLCDKGIVSDSCVLLE 433
K P++ T++ LI LC ++ + +
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD 397
Query: 434 DMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEP 477
+M+EKG+ P+ T+ ++L + G E+V + L KM + EP
Sbjct: 398 EMLEKGLFPTIRTYHAFMRIL-RTG-EEVFELLA-KMRKMGCEP 438
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 240/440 (54%), Gaps = 9/440 (2%)
Query: 21 RYNSSEPSTEALDAAKS---ISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAG 77
R +S+ A D KS + K PK L+ AL++SG+ + P ++E VL + +AG
Sbjct: 70 RTKNSKYDEFASDVEKSYRILRKFHSRVPK--LELALNESGVELRPGLIERVLNRCGDAG 127
Query: 78 TLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTK--RMLNVETFC 135
L + FF WA KQ Y HS+ Y SM++ L+K+RQ+ +W L+ MR + +++ E F
Sbjct: 128 NLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV 187
Query: 136 IIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR 195
++++++A V++A+ + M K+G + F LL ALCK +V+ A ++F+ M+ R
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 247
Query: 196 FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
F + + ++ LL GW + + A+ + +M + G PDIV Y ++ AG++ +A
Sbjct: 248 FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 256 GIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAF 315
+++ M P + Y+VL+ +R+E+A+ F+EME+ ADV Y AL+ F
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 316 CKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADA 374
CK K Y VL DM KG+ P+ T I+ + +E + +M ++ D
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 427
Query: 375 DTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLED 434
Y ++I++ C+ GE+++A ++W M+ P + TF ++INGL +G + ++ ++
Sbjct: 428 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKE 487
Query: 435 MIEKGIRPSGETFGKLRKLL 454
M+ +G+ S +G L+ LL
Sbjct: 488 MVTRGLF-SVSQYGTLKLLL 506
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 184/402 (45%), Gaps = 6/402 (1%)
Query: 61 VSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQ-NYEHSVRAYHSMIESLAKIRQYQIMWDL 119
+ PE+ ++++F +A + E + +E + ++++L K + L
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 120 VNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKS 179
MR + +N+ F ++ + RV K+ EA Y M + G ++ + LLS +
Sbjct: 241 FEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANA 300
Query: 180 KNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTY 238
+ A ++ M+ R F P++ Y++L++ K + A ++F EM C D+VTY
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 239 GIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEK 298
+V CK G++D+ ++ M P+ Y ++ + + E+ ++ +M +
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 299 NGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDE 358
D+ +YN +I CK + K R+ +M G++P T I++NGL +G E
Sbjct: 421 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLE 480
Query: 359 AYRVFRRMIK---LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIP-SMHTFSV 414
A F+ M+ + T +++ + +LE A VW + K ++ ++++
Sbjct: 481 ASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTI 540
Query: 415 LINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIK 456
I+ L KG ++C +MIE P +TF KL K L K
Sbjct: 541 WIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 239/449 (53%), Gaps = 15/449 (3%)
Query: 45 SPKVVLDT-ALDQSGI---RVSPEIVEDVLEK---FRNAGTL--AFCFFKWAEKQQNYEH 95
+P + L +LD S I +VSP +V V+EK R+ L + FF WA + +Y+H
Sbjct: 89 NPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDH 148
Query: 96 -SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYT 153
S Y+ MI+ K+RQ+ + W L++ M+++ + +++ETF I++R+Y R EAV+
Sbjct: 149 KSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 154 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKD 213
FN M+ YG + AF+ ++S L + + +AQ FD +KDRF PD Y+ L+ GW +
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRA 268
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
+ A ++F+EM G P++ TY I++D LC+ G++ A + M + C P + +
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ L+ + R E + + +M+K G D YN LI A C+ +N +VL M
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEK 392
K N+ T N I + + + + A+R++ +M++ CE + TY ++++MF +
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMI-EKGIRPSGETFGKLR 451
K+ K M K P+++T+ +L+ C G +++ L ++M+ EK + PS + +
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 452 KLLIKEGREDVLKFLQEKM--NLLVKEPL 478
L + G+ + L EKM LV PL
Sbjct: 509 AQLRRAGQLKKHEELVEKMIQKGLVARPL 537
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 224/433 (51%), Gaps = 14/433 (3%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLA- 108
++ ALD+S + ++ +V +L++ + AF FF WA Q++Y H AY+ MI+ L+
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 171
Query: 109 ---KIRQYQIMWDLVNAMR--TKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGV- 162
K +Q++I+ D+++ M+ K ++ V+ I+RKY ++ V F ++ V
Sbjct: 172 TKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC--ERYLTHVQKFAKRKRIRVK 229
Query: 163 TQ-NLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRARE 221
TQ + AFN LL ALCK V++ + + M+ R PD+ T+++L GW + + +A +
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 222 IFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSM---DSTVCRPTSFIYSVLVH 278
+ EM++ G P+ TY +D C+AG VDEA + M S V PT+ +++++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 279 TYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAP 338
++ E+ + M G L DV+ Y +I C A K Y+ L +M++KG P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 339 NSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVW 397
+ T N L L +TDEA +++ RM++ C TY M+I MF + + + AF W
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 398 KYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKE 457
M + + + T+ +INGL D ++C LLE+++ KG++ F L +
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 458 GREDVLKFLQEKM 470
G + + E M
Sbjct: 530 GNLKAIHKVSEHM 542
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 30/302 (9%)
Query: 75 NAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETF 134
+A T FF W + ++ + +++ MIE+ K + T+
Sbjct: 267 DANTFNVLFFGWC-RVRDPKKAMKLLEEMIEAGHKPENF-------------------TY 306
Query: 135 CIIMRKYARVQKVEEAVYTFNVMQKYG--VTQNLA-AFNGLLSALCKSKNVRKAQEIFDC 191
C + + + V+EA F+ M G V+ A F ++ AL K+ KA+E F+
Sbjct: 307 CAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND---KAEECFEL 363
Query: 192 MKDRF----IPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCK 247
+ +PD TY ++EG + A + EM + G PDIVTY + VLC+
Sbjct: 364 IGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE 423
Query: 248 AGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAM 307
+ DEAL + M + C P+ Y++L+ + + + A +T+ EM+K + DV
Sbjct: 424 NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET 483
Query: 308 YNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI 367
Y A+I ++ K +L+++ +KG+ R + L L G ++V M
Sbjct: 484 YCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
Query: 368 KL 369
K
Sbjct: 544 KF 545
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 220/437 (50%), Gaps = 12/437 (2%)
Query: 54 LDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQY 113
L + + V+ +V VL +F N A+ FF WA Q Y HS Y++M++ L K R +
Sbjct: 123 LSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNF 182
Query: 114 QIMWDLVNAM---RTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQK-YGVTQNLAAF 169
+MW+LVN M +++ ++T +MR+ A+ K +AV F M+K YGV + A
Sbjct: 183 DLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAM 242
Query: 170 NGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDT 229
N L+ AL K ++ A E+F + D PD++T++IL+ G+ K AR + M T
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 230 GCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDA 289
PD+VTY V+ CK G +++ M C P Y++++H+ G ++ +A
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 290 VDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNG 349
+ + +M+++G + D Y++LI K +FK+ + +DM ++GV + N +++
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Query: 350 LIGRGETDEAYRVFRRMI----KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRF 405
+ + A R+ +RM + C + +TY ++KM C +++ + +M
Sbjct: 423 ALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDV 482
Query: 406 IPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET----FGKLRKLLIKEGRED 461
+ T+ +LI GLC G V ++C+ E+ + KG+ P T +L K + E +
Sbjct: 483 SIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLK 542
Query: 462 VLKFLQEKMNLLVKEPL 478
+ +Q K + PL
Sbjct: 543 IQSLVQSKTMIDSHSPL 559
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 232/434 (53%), Gaps = 10/434 (2%)
Query: 18 FLRRYNSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAG 77
F R+N + ALD I SSP+ + LD+ GI ++ E+V +V+ + R+
Sbjct: 65 FPNRFNDDKDKQSALDVHNIIKHHRGSSPEKI-KRILDKCGIDLTEELVLEVVNRNRSDW 123
Query: 78 TLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR--MLNVETFC 135
A+ + KQ + S Y+ +++ L K+R+++ + + M +KR +N +T+
Sbjct: 124 KPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM-SKRDGFVNEKTYE 182
Query: 136 IIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR 195
+++ +YA KV+EAV F +++G+ +L AF+GLL LC+ K+V A+ +F +
Sbjct: 183 VLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE 242
Query: 196 FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
F D K +++L GW N+ A+ +++++ + C PD+V+YG M++ L K G++ +A+
Sbjct: 243 FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAM 302
Query: 256 GIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAF 315
+ ++M T P I + ++ + RI +A++ F E+ + G +V YN+L+
Sbjct: 303 ELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
Query: 316 CKANKFKNVYRVLKDMNSKG--VAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEA 372
CK + + V+ ++++M KG +PN T + +L + D V RM K CE
Sbjct: 363 CKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEM 419
Query: 373 DADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLL 432
+D Y +M +++ Q + EK ++W M+ P T+++ I+GL KG + ++
Sbjct: 420 TSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYF 479
Query: 433 EDMIEKGIRPSGET 446
++M+ KG+ P T
Sbjct: 480 QEMMSKGMVPEPRT 493
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 2/236 (0%)
Query: 238 YGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEME 297
Y ++DVL K R +E + M Y VL++ Y +++++AV F +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 298 KNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETD 357
+ GI D+ ++ L+ C+ K L + + + N+ILNG G
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRY-KHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 358 EAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLI 416
EA R ++ +I C D +Y MI + G+L KA ++++ M R P + + +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 417 NGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNL 472
+ LC K + ++ + ++ EKG P+ T+ L K L K R + + L E+M L
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 226/444 (50%), Gaps = 19/444 (4%)
Query: 46 PKVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIE 105
P L++ALD++GI S E+V + ++ ++ L FKWAE + + S + S++
Sbjct: 84 PGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVN 143
Query: 106 SLAKIRQYQIMWDLV-NAMRT---KRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKY- 160
SL K R+++I W LV + +R+ +++ +TF +++R+YAR V++A+ F + Y
Sbjct: 144 SLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 161 ---GVTQNLAAFNGLLSALCKSKNVRKA----QEIFDCMKDRFIPDSKTYSILLEGWGKD 213
L LL ALCK +VR+A + I M ++P + ++ILL GW +
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
L +A +++ EM P +VTYG +++ C+ RV A+ +++ M ++
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVF 323
Query: 274 SVLVHTYGVENRIEDAV---DTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKD 330
+ ++ G R+ +A+ + F E + YN+L+ FCKA ++LK
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESG---PTIVTYNSLVKNFCKAGDLPGASKILKM 380
Query: 331 MNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEA-DADTYTMMIKMFCQGGE 389
M ++GV P + T N +T+E ++ ++I+ + D TY +++KM C+ G+
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 390 LEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGK 449
L A +V K MK + P + T ++LI+ LC ++ ++ ++ + +GI P TF
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 450 LRKLLIKEGREDVLKFLQEKMNLL 473
+ L +G D+ K L M+ L
Sbjct: 501 IDNGLRSKGMSDMAKRLSSLMSSL 524
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 127/290 (43%), Gaps = 14/290 (4%)
Query: 91 QNYEHSVRAYHSMIESL---AKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKV 147
N+ SVR ++ ++ K++Q + +W+ + AM K V T+ ++ Y R+++V
Sbjct: 244 SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKP--TVVTYGTLIEGYCRMRRV 301
Query: 148 EEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-----PDSKT 202
+ A+ M+ + N FN ++ L ++ + +A M +RF P T
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEAL----GMMERFFVCESGPTIVT 357
Query: 203 YSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMD 262
Y+ L++ + K +LP A +I + M+ G +P TY K + +E + + +
Sbjct: 358 YNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI 417
Query: 263 STVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFK 322
P Y +++ + ++ A+ EM+ GI D+ LI C+ +
Sbjct: 418 EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 323 NVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEA 372
+ + +G+ P T +I NGL +G +D A R+ M L +
Sbjct: 478 EAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHS 527
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 109/246 (44%), Gaps = 33/246 (13%)
Query: 260 SMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKAN 319
++D T P+ + L + +V + EM K G +++++++ + CKA
Sbjct: 91 ALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEM-KPGFTLSPSLFDSVVNSLCKAR 149
Query: 320 KFKNVY-----RVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVF---RRMIKLCE 371
+F+ + RV D S V+ + T +++ G +A R F R +C+
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSAD--TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCK 207
Query: 372 ADADTYTM--MIKMFCQGGELEKAFKVWKYMKLKR--------FIPSMHTFSVLINGLCD 421
+ + + ++ C+ G + +A M L+R ++PS+ F++L+NG
Sbjct: 208 SATELRLLEVLLDALCKEGHVREA-----SMYLERIGGTMDSNWVPSVRIFNILLNGWFR 262
Query: 422 KGIVSDSCVLLEDMIEKGIRPSGETFG-------KLRKLLIKEGREDVLKFLQEKMNLLV 474
+ + L E+M ++P+ T+G ++R++ I + +K + ++N +V
Sbjct: 263 SRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV 322
Query: 475 KEPLCD 480
P+ D
Sbjct: 323 FNPIID 328
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 190/363 (52%), Gaps = 3/363 (0%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y ++ + K Q + +L+ M + + L+ + II+ + ++ A FN M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDRFIPDSKTYSILLEGWGKDPNL 216
+ G+T N+ +N L+ C + ++ D +K + P+ T+S+L++ + K+ L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A E+ +EM+ G PD +TY ++D CK +D+A +V M S C P +++L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
++ Y NRI+D ++ F +M G++AD YN LI FC+ K + ++M S+ V
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFK 395
PN T I+L+GL GE+++A +F ++ K E D Y ++I C +++ A+
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLI 455
++ + LK P + T++++I GLC KG +S++ +L M E G P G T+ L + +
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 456 KEG 458
+G
Sbjct: 590 GDG 592
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 3/378 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTF 154
+V + + ++AK +QY ++ L M K + N+ T I++ + R +K+ A
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
+ K G N F+ L++ LC V +A E+ D M + PD T + L+ G
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + +MV+ GC P+ VTYG +++V+CK+G+ A+ +++ M+ + + Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
S+++ +++A + F EME GI ++ YN LIG FC A ++ + ++L+DM
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEK 392
+ + PN T +++++ + G+ EA + + MI + D TYT +I FC+ L+K
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A ++ M K P++ TF++LING C + D L M +G+ T+ L +
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 453 LLIKEGREDVLKFLQEKM 470
+ G+ +V K L ++M
Sbjct: 447 GFCELGKLNVAKELFQEM 464
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 199/430 (46%), Gaps = 23/430 (5%)
Query: 60 RVSPEIVEDVLEKFRNAGTL-----------AFC----FFKWAEKQQNYEHSVRAYHSMI 104
R+S ++ + V + GTL +FC F ++++ +Y +R+ I
Sbjct: 8 RLSSQVSKFVQPRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDI 67
Query: 105 ESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQ 164
++ I ++ M + ++ + V F + A+ ++ + + M+ G+
Sbjct: 68 KADDAIDLFRDM------IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH 121
Query: 165 NLAAFNGLLSALCKSKNVRKA-QEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIF 223
NL + +++ C+ + + A + +K + P++ T+S L+ G + + A E+
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 224 REMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVE 283
MV+ G PD++T +V+ LC +G+ EA+ ++ M C+P + Y +++
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 284 NRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTC 343
+ A++ +ME+ I D Y+ +I CK N + + +M KG+ N T
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 344 NIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKL 402
NI++ G G D+ ++ R MIK + T++++I F + G+L +A ++ K M
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 403 KRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDV 462
+ P T++ LI+G C + + + +++ M+ KG P+ TF L K R D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 463 LKFLQEKMNL 472
L KM+L
Sbjct: 422 GLELFRKMSL 431
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 136/265 (51%), Gaps = 5/265 (1%)
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
T+ ++ + + +++A ++M G N+ FN L++ CK+ + E+F M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 193 KDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
R + D+ TY+ L++G+ + L A+E+F+EMV P+IVTY I++D LC G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
++AL I + ++ + IY++++H ++++DA D F + G+ V YN +
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC- 370
IG CK + + M G AP+ T NI++ +G G+ ++ ++ + K C
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL-KRCG 608
Query: 371 -EADADTYTMMIKMFCQGGELEKAF 394
DA T M+I M G L+K+F
Sbjct: 609 FSVDASTIKMVIDML-SDGRLKKSF 632
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 234/483 (48%), Gaps = 24/483 (4%)
Query: 6 HSRNKMISGCIS--FLRRYNSSEPSTEALDAAKSISKIMLSS--PKVVLDTALDQSGIRV 61
H + IS IS F EPS++A + IS++++++ P ++++L +GI +
Sbjct: 14 HQLRRRISTIISAGFTLNLPKLEPSSDA----ELISQMLITNHNPFHFMESSLQLNGISL 69
Query: 62 SPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVN 121
+P ++ L + R+ +A FF++ + + +++ +I+ L ++RQ+ ++ L+
Sbjct: 70 TPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIV 129
Query: 122 AMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQN--LAAFNGLLSALCKS 179
M + ETF I++++ +AV F+ + + L F LL LCK
Sbjct: 130 EMDQT---SPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEFGFLLDTLCKY 186
Query: 180 KNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYG 239
+ A +F+ K+ F D K Y+IL+ GW K + A + EM+++G P++VTY
Sbjct: 187 GYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYN 246
Query: 240 IMVDVLCKAG----------RVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDA 289
++++ +C+ V A + M P +S+++H Y ++ E
Sbjct: 247 VLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELT 306
Query: 290 VDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNG 349
+D M+ GI + Y +++ C + + +L+ M G++P+S T N
Sbjct: 307 LDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKE 366
Query: 350 LIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPS 408
GR + + A ++R+M LC+ TY +++ F G++E ++W +K P
Sbjct: 367 YKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPD 426
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQE 468
+ +++ L++GLC K ++C +MIE+G P TF L K LI+ + + L++
Sbjct: 427 LDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKK 486
Query: 469 KMN 471
K++
Sbjct: 487 KLD 489
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
+V +F I++ Y+R K E + +M+ G++ + + ++ LC + +A+E+
Sbjct: 286 DVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELL 345
Query: 190 DCMKDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
+ M + I P S TY+ + + + A ++R+M + C P TY +++
Sbjct: 346 ETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINL 405
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G+++ I + ++ P Y+ LVH + + ++A F+EM + G L +
Sbjct: 406 GKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTF 465
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVA 337
L ++NK + R+ K ++ + +
Sbjct: 466 ETLYKGLIQSNKMRTWRRLKKKLDEESIT 494
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 176/342 (51%), Gaps = 6/342 (1%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
+V T+ +++ Y + ++ A +V+ + V+ ++ +N +L +LC S +++A E+
Sbjct: 171 DVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 190 DCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
D M R PD TY+IL+E +D + A ++ EM D GC PD+VTY ++V+ +CK
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
GR+DEA+ + M S+ C+P +++++ + R DA +M + G V +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI- 367
N LI C+ +L+ M G PNS + N +L+G + D A RM+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 368 KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSD 427
+ C D TY M+ C+ G++E A ++ + K P + T++ +I+GL G
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 428 SCVLLEDMIEKGIRPSGETFGKLRKLLIKEGRED-VLKFLQE 468
+ LL++M K ++P T+ L L +EG+ D +KF E
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 190/413 (46%), Gaps = 40/413 (9%)
Query: 97 VRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNV 156
V Y+ MI K + +++ M +V T+ I+R K+++A+ +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 157 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPN 215
M + ++ + L+ A C+ V A ++ D M+DR PD TY++L+ G K+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 216 LPRAREIFREMVDTGCNPDI-----------------------------------VTYGI 240
L A + +M +GC P++ VT+ I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 241 MVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 300
+++ LC+ G + A+ I++ M C+P S Y+ L+H + E +++ A++ M G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 301 ILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAY 360
D+ YN ++ A CK K ++ +L ++SKG +P T N +++GL G+T +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 361 RVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGL 419
++ M K + D TY+ ++ + G++++A K + + P+ TF+ ++ GL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 420 CDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEG-REDVLKFLQEKMN 471
C + L MI +G +P+ ++ L + L EG ++ L+ L E N
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 21/301 (6%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
NV T II+R + +A M + G + ++ FN L++ LC+ + +A +I
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 190 DCMKDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
+ M P+S +Y+ LL G+ K+ + RA E MV GC PDIVTY M+ LCK
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G+V++A+ I+ + S C P Y+ ++ + A+ EM + D Y
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI- 367
++L+G + K + + G+ PN+ T N I+ GL +TD A MI
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 368 KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSD 427
+ C+ + +YT++I+ G ++A + L+N LC+KG++
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALE-------------------LLNELCNKGLMKK 588
Query: 428 S 428
S
Sbjct: 589 S 589
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
Query: 197 IPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALG 256
+PD + L+ G+ + +A +I + +G PD++TY +M+ CKAG ++ AL
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 257 IVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFC 316
++ M + P Y+ ++ + +++ A++ M + DV Y LI A C
Sbjct: 194 VLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 317 KANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADAD 375
+ + + ++L +M +G P+ T N+++NG+ G DEA + M C+ +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 376 TYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDM 435
T+ ++++ C G A K+ M K F PS+ TF++LIN LC KG++ + +LE M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 436 IEKGIRPSGETFGKLRKLLIKEGRED 461
+ G +P+ ++ L KE + D
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMD 396
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 197/378 (52%), Gaps = 3/378 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ ++ ++ ++AK+ +++++ L M+T + ++ T+ I + + R ++ A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ + LL+ C SK + A + D M + + PD+ T++ L+ G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + +MV GC PD+VTYG +V+ LCK G +D AL ++ M++ + I+
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ + +E AVD F EME GI +V YN+LI C ++ + R+L +M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEK 392
K + PN T N +++ G+ EA ++ MI + + D TY ++I FC L++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A +++K+M K +P++ T++ LING C V D L +M ++G+ + T+ + +
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 453 LLIKEGREDVLKFLQEKM 470
+ G D + + ++M
Sbjct: 442 GFFQAGDCDSAQMVFKQM 459
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 183/364 (50%), Gaps = 6/364 (1%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
Q+ + + Y +++ L K + +L+N M R+ NV F I+ + + VE
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
AV F M+ G+ N+ +N L++ LC A + M ++ I P+ T++ L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ L A ++ EM+ +PD +TY ++++ C R+DEA + K M S C
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P Y+ L++ + R+ED V+ F EM + G++ + Y +I F +A + V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
K M S V + T +I+L+GL G+ D A +F+ + K E + Y MI+ C+
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
G++ +A+ ++ + +K P + T++ +I+GLC K ++ ++ L M E G P+ T
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 447 FGKL 450
+ L
Sbjct: 573 YNTL 576
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 2/291 (0%)
Query: 182 VRKAQEIF-DCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGI 240
V A ++F D +K R P ++ LL K + +M G + D+ TY I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 241 MVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 300
++ C+ ++ AL ++ M P S L++ Y RI DAV +M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 301 ILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAY 360
D + LI NK ++ M +G P+ T ++NGL RG+ D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 361 RVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGL 419
+ +M +A+ + +I C+ +E A ++ M+ K P++ T++ LIN L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 420 CDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
C+ G SD+ LL +M+EK I P+ TF L KEG+ + L E+M
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
+++DAVD F +M K+ + +N L+ A K NKF+ V + + M + G++ + T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 345 IILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLK 403
I +N R + A V +M+KL E D T + ++ +C + A + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVL 463
+ P TF+ LI+GL S++ L++ M+++G +P T+G + L K G D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 464 KFLQEKM 470
L KM
Sbjct: 243 LNLLNKM 249
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 40/177 (22%)
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMR 139
A FK+ +K + E ++ Y++MIE + K + WDL FC +
Sbjct: 487 ALVIFKYLQKSE-MELNIFIYNTMIEGMCKAGKVGEAWDL--------------FCSL-- 529
Query: 140 KYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMK-DRFIP 198
++ V T+N M +S LC + +++A ++F MK D +P
Sbjct: 530 ------SIKPDVVTYNTM---------------ISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 199 DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
+S TY+ L+ +D + + E+ +EM +G D T ++ ++L GR+D++
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKSF 624
>sp|Q9M8M3|PP136_ARATH Pentatricopeptide repeat-containing protein At1g80550,
mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2
SV=1
Length = 448
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 215/425 (50%), Gaps = 15/425 (3%)
Query: 25 SEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFF 84
+ P + L + K IS + K DQS + V + L + N A FF
Sbjct: 13 ASPYSVRLLSVKPISNV--DDAKFRSQEEEDQSS--YDQKTVCEALTCYSNDWQKALEFF 68
Query: 85 KWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAM--RTKRMLNVETFCIIMRKYA 142
W E++ + H+ ++ +I+ L K +++I W L+N M T+ + N TF I+ ++Y
Sbjct: 69 NWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYV 128
Query: 143 RVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF---DCMKDRF-IP 198
V+EA+ ++ + + + + +N L+ ALC+ K+V +A+E+ + + + F +
Sbjct: 129 TAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVS 187
Query: 199 DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIV 258
++K ++++L GW K + +E +++M G D+ +Y I +D++CK+G+ +A+ +
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 259 KSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKA 318
K M S + Y+ ++ G +E + F EM + G +VA +N +I C+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 319 NKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTY 377
+ ++ YR+L +M +G P+S T + + L + E +F RMI+ DTY
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTY 364
Query: 378 TMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIE 437
M+++ F + G L+ VWK MK P ++ +I+ L KG++ + E+MIE
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Query: 438 KGIRP 442
+G+ P
Sbjct: 425 RGLSP 429
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 228 DTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSM-DSTVCRPTSFIYSVLVHTYGVENRI 286
++G T+ ++D+L K + + ++ M +T P + ++ Y + +
Sbjct: 74 ESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLV 133
Query: 287 EDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKG---VAPNSRTC 343
++A+D + +++ + + + YN L+ A C+ + N G N++
Sbjct: 134 QEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIH 192
Query: 344 NIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKL 402
N+IL G G + +++M + D +Y++ + + C+ G+ KA K++K MK
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 403 KRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR-ED 461
+R + ++ +I + V + +M E+G P+ T + KLL ++GR D
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 462 VLKFLQE 468
+ L E
Sbjct: 313 AYRMLDE 319
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 197/372 (52%), Gaps = 3/372 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
+ + V Y+S++ + + + DL+ M + + +V T+ I+ R ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILL 207
A+ F M+ G+ ++ +N L+ LCK+ + M R +P+ T+++LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ L A E+++EM+ G +P+I+TY ++D C R+ EA ++ M C
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P ++ L+ Y + R++D + F + K G++A+ Y+ L+ FC++ K K +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
++M S GV P+ T I+L+GL G+ ++A +F + K + YT +I+ C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
GG++E A+ ++ + K P++ T++V+I+GLC KG +S++ +LL M E G P+ T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 447 FGKLRKLLIKEG 458
+ L + +++G
Sbjct: 546 YNTLIRAHLRDG 557
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 178/384 (46%), Gaps = 38/384 (9%)
Query: 123 MRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNV 182
+R++ + ++ F AR ++ + ++ G+ N+ N +++ C+
Sbjct: 80 IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKT 139
Query: 183 RKAQEIFD-CMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIM 241
A + MK + PD+ T++ L++G + + A + MV+ GC PD+VTY +
Sbjct: 140 CFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSI 199
Query: 242 VDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGI 301
V+ +C++G AL +++ M+ + F YS ++ + + I+ A+ F EME GI
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 302 LADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYR 361
+ V YN+L+ CKA K+ + +LKDM S+ + PN T N++L+ + G+ EA
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 362 VFRRMI------------------------------------KLCEADADTYTMMIKMFC 385
+++ MI C D T+T +IK +C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 386 QGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGE 445
++ KV++ + + + + T+S+L+ G C G + + L ++M+ G+ P
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 446 TFGKLRKLLIKEGR-EDVLKFLQE 468
T+G L L G+ E L+ ++
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFED 463
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 163/354 (46%), Gaps = 42/354 (11%)
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIM 138
A FK E + + SV Y+S++ L K ++ L+ M ++ ++ NV TF +++
Sbjct: 247 AISLFKEME-TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 139 RKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFD-------- 190
+ + K++EA + M G++ N+ +N L+ C + +A + D
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 191 -------------CMKDR---------------FIPDSKTYSILLEGWGKDPNLPRAREI 222
CM R + ++ TYSIL++G+ + + A E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 223 FREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGV 282
F+EMV G PD++TYGI++D LC G++++AL I + + + +Y+ ++
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 283 ENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRT 342
++EDA + F + G+ +V Y +I CK +L+ M G APN T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 343 CNIILNGLIGRGETDEAYRVFRRMIKLC--EADADTYTMMIKMFCQGGELEKAF 394
N ++ + G+ + ++ M K C ADA + M+I M GEL+K+F
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDMLLS-GELDKSF 597
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
D+A+ + + M + P+ +S + +D ++E NGI ++ N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LC 370
I FC+ K Y VL + G P++ T N ++ GL G+ EA + RM++ C
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
+ D TY ++ C+ G+ A + + M+ + + T+S +I+ LC G + +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
L ++M KGI+ S T+ L + L K G+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 200/405 (49%), Gaps = 36/405 (8%)
Query: 100 YHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTFNVMQ 158
Y ++I SL+K + L+ M + + ETF ++ + ++ EA N M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 159 KYGVTQNLAAFNGLLSALCKSKNVRKAQE-----------IFDCMKDRFI---------- 197
G + + L++ LCK V A++ IF+ + F+
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 198 ------------PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVL 245
PD TY+ L+ G+ K+ + A E+ +M + GC P++ +Y I+VD
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 246 CKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADV 305
CK G++DEA ++ M + +P + ++ L+ + E+RI +AV+ F EM + G DV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 306 AMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRR 365
+N+LI C+ ++ K+ +L+DM S+GV N+ T N ++N + RGE EA ++
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 366 MI-KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGI 424
M+ + D TY +IK C+ GE++KA +++ M PS + ++LINGLC G+
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 425 VSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR-EDVLKFLQE 468
V ++ ++M+ +G P TF L L + GR ED L ++
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 168/338 (49%), Gaps = 2/338 (0%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
+V T+ ++ Y + V A+ + M+ G N+ ++ L+ CK + +A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 190 DCMK-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
+ M D P++ ++ L+ + K+ +P A EIFREM GC PD+ T+ ++ LC+
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
+ AL +++ M S + Y+ L++ + I++A EM G D Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI- 367
N+LI C+A + + + M G AP++ +CNI++NGL G +EA + M+
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 368 KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSD 427
+ D T+ +I C+ G +E +++ ++ + P TF+ L++ LC G V D
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 428 SCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKF 465
+C+LL++ IE G P+ T+ L + +I + D +F
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 196/416 (47%), Gaps = 43/416 (10%)
Query: 94 EHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVY 152
E + ++Y+ ++E L +++ ++ M ++++ + TF ++M+ + V +++ A+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 153 TFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFIPDSKTYSILLEGWG 211
M K+G N + L+ +L K V +A ++ + M +PD++T++ ++ G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 212 KDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSF 271
K + A ++ M+ G PD +TYG +++ LCK GRVD A K + + +P
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIV 354
Query: 272 IYSVLVHTYGVENRIEDAVDTFLEMEKN-GILADVAMYNALIGAFCKANKFKNVYRVLKD 330
I++ L+H + R++DA +M + GI+ DV YN+LI + K VL D
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 331 MNSKGVAPNSRTCNIILNGLIGRGETDEAYRV---------------------------- 362
M +KG PN + I+++G G+ DEAY V
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 363 -------FRRMI-KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSV 414
FR M K C+ D T+ +I C+ E++ A + + M + + + T++
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 415 LINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
LIN +G + ++ L+ +M+ +G T+ L K L + G D + L EKM
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 187/437 (42%), Gaps = 43/437 (9%)
Query: 27 PSTEALDAAKSISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKW 86
P D+A K++ LD+ L S +++P + +LE N T + F W
Sbjct: 46 PEIGGTDSANEWEKLL---KPFDLDS-LRNSFHKITPFQLYKLLELPLNVST-SMELFSW 100
Query: 87 AEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVET-FCIIMRKYARVQ 145
Q Y HS Y +I L +++ + L+ M+ + ++ E+ F IMR Y +
Sbjct: 101 TGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDK-- 158
Query: 146 KVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSI 205
A F G + L + + + ++ C P K+Y++
Sbjct: 159 ---------------------AGFPGQTTRL-----MLEMRNVYSCE-----PTFKSYNV 187
Query: 206 LLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTV 265
+LE A +F +M+ P + T+G+++ C +D AL +++ M
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247
Query: 266 CRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVY 325
C P S IY L+H+ NR+ +A+ EM G + D +N +I CK ++
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 326 RVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADADTYTMMIKMFC 385
+++ M +G AP+ T ++NGL G D A +F R+ K + + +I F
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---PEIVIFNTLIHGFV 364
Query: 386 QGGELEKAFKVWKYMKLKR-FIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSG 444
G L+ A V M +P + T++ LI G +G+V + +L DM KG +P+
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 445 ETFGKLRKLLIKEGRED 461
++ L K G+ D
Sbjct: 425 YSYTILVDGFCKLGKID 441
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 157/330 (47%), Gaps = 22/330 (6%)
Query: 32 LDAAKSISKIMLSSPKVVLDTALDQSGIRVSPE-----IVEDVLEKFRNAGTLAFCFFKW 86
LD AK++ M++S +V D S I + + +VL RN G
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-------- 420
Query: 87 AEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQ 145
+ +V +Y +++ K+ + ++++N M + N F ++ + +
Sbjct: 421 -------KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 146 KVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDRFIPDSKTYS 204
++ EAV F M + G ++ FN L+S LC+ ++ A + D + + + ++ TY+
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 205 ILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDST 264
L+ + + + AR++ EMV G D +TY ++ LC+AG VD+A + + M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 265 VCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNV 324
P++ ++L++ +E+AV+ EM G D+ +N+LI C+A + ++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 325 YRVLKDMNSKGVAPNSRTCNIILNGLIGRG 354
+ + + ++G+ P++ T N +++ L G
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 298 KNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETD 357
+NG +Y LIG +FK + R+L M +G+ I+ G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 358 EAYRVFRRM--IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVL 415
+ R+ M + CE +Y +++++ G + A V+ M ++ P++ TF V+
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 416 INGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR-EDVLKFLQE 468
+ C + + LL DM + G P+ + L L K R + L+ L+E
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 191/392 (48%), Gaps = 4/392 (1%)
Query: 59 IRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWD 118
+ +S +V +L +FR+ A KWAE + ++HS AY ++ L K +++ M +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 119 LVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCK 178
V MR +++ + T IMR++A + EEAV F+ + ++G+ +N + N LL LCK
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 179 SKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTY 238
K V +A+ + +K P++ T++I + GW K + A +EM G P +++Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 239 GIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEK 298
++ C+ + ++ M++ P S Y+ ++ + + E+A+ M++
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKR 322
Query: 299 NGILADVAMYNALIGAFCKANKFKNVYRVLK-DMNSKGVAPNSRTCNIILNGLIGRGETD 357
+G D YN LI +A + + RV + +M GV+ N+ T N ++ E D
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 358 EAYRVFRRM--IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIP-SMHTFSV 414
+A + + M LC D TY +++ + G++ + K+ K M K + T++
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTF 442
Query: 415 LINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
LI LC + + L E+MI + I P T
Sbjct: 443 LIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 251/485 (51%), Gaps = 20/485 (4%)
Query: 5 YHSRNKMISGCISFLRRYNSSE---PSTEALDAAKSISKIMLSSP-KVVLDTALDQSGIR 60
+H N +S +SFL S+ P E D A+++ +++ S +V L +L SGI
Sbjct: 11 HHVSNFRLS--VSFLHSVALSDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIH 68
Query: 61 VSPEIVEDVLEKFRNAG---TLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMW 117
+S ++++ VL++ R + F+++A + + HS + +M+ L + R++ +W
Sbjct: 69 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIW 128
Query: 118 DLVNAMRTKR----MLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQ-NLAAFNGL 172
+L+ + TKR +++ T +++ + A++ V + V +F ++ + A FN L
Sbjct: 129 ELL--IETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNAL 186
Query: 173 LSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCN 232
L LC+ K++ A+ ++ +K +F PD +T++ILL GW A F EM G
Sbjct: 187 LRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKS---SEEAEAFFEEMKGKGLK 243
Query: 233 PDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDT 292
PD+VTY ++DV CK +++A ++ M P Y+ ++ G+ + + A +
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREV 303
Query: 293 FLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIG 352
EM++ G DVA YNA I FC A + + +++ +M KG++PN+ T N+ L
Sbjct: 304 LKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 363
Query: 353 RGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHT 411
+ ++ ++ RM+ C + + +IKMF + +++ A ++W+ M +K F
Sbjct: 364 ANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLV 423
Query: 412 FSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMN 471
VL++ LCD V ++ L +M+EKG RPS +F +++ L+ + D + L +KM
Sbjct: 424 SDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMA 483
Query: 472 LLVKE 476
+ E
Sbjct: 484 IFSTE 488
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 170/321 (52%), Gaps = 4/321 (1%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
NV T+ ++R + + + AV FN M G N+ +N L++ LC+ A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 190 -DCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
D MK R P+ T++ L++ + K L A+E++ M+ PD+ TYG +++ LC
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G +DEA + M+ C P IY+ L+H + R+ED + F EM + G++A+ Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK 368
LI +C + V M+S+ P+ RT N++L+GL G+ ++A +F M K
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 369 LCEADAD--TYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVS 426
E D + TYT++I+ C+ G++E AF ++ + K P++ T++ +I+G C +G++
Sbjct: 427 R-EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 427 DSCVLLEDMIEKGIRPSGETF 447
++ L + M E G P+ +
Sbjct: 486 EADSLFKKMKEDGFLPNESVY 506
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 173/394 (43%), Gaps = 19/394 (4%)
Query: 74 RNAGTLAFC-FFKWAEKQQNYEHSVR-AYHSMIESLAKIRQYQIMWDLVNAMRTKRML-N 130
R A +L+ C F W +Y +R H++ Q+ DL M R L +
Sbjct: 31 RTAASLSLCGFCFWIRAFSSYRKILRNGLHNL--------QFNDALDLFTRMVHSRPLPS 82
Query: 131 VETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALC-KSKNVRKAQEIF 189
+ F ++ A++ + + + F MQ G+ L N ++ +C S+ R + +
Sbjct: 83 IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLG 142
Query: 190 DCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAG 249
MK F PD T++ LL G+ + A +F +++ G P++VTY ++ LCK
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 250 RVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYN 309
++ A+ + M + RP Y+ LV R DA +M K I +V +
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 310 ALIGAFCKANKF---KNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM 366
ALI AF K K K +Y V+ M+ V P+ T ++NGL G DEA ++F M
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMS---VYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 367 IK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIV 425
+ C + YT +I FC+ +E K++ M K + + T++VLI G C G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 426 SDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
+ + M + P T+ L L G+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 162/360 (45%), Gaps = 12/360 (3%)
Query: 124 RTKRMLNVETFCIIMRKYARVQKV----------EEAVYTFNVMQKYGVTQNLAAFNGLL 173
RT L++ FC +R ++ +K+ +A+ F M ++ F LL
Sbjct: 31 RTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLL 90
Query: 174 SALCKSKNVRKAQEIFDCMKDRFIPDSK-TYSILLEGWGKDPNLPRAREIFREMVDTGCN 232
S + K +F+ M+ IP T +I++ RA +M+ G
Sbjct: 91 SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE 150
Query: 233 PDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDT 292
PD+VT+ +++ C R+++A+ + + +P Y+ L+ + AV+
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 293 FLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIG 352
F +M NG +V YNAL+ C+ ++ + +L+DM + + PN T +++ +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 353 RGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHT 411
G+ EA ++ MI++ D TY +I C G L++A +++ M+ P+
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 412 FSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMN 471
++ LI+G C V D + +M +KG+ + T+ L + GR DV + + +M+
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 97 VRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFN 155
+R Y+ +++ L + + + MR + M +N+ T+ II++ ++ KVE+A F
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 156 VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMK-DRFIPDSKTY 203
+ G+ N+ + ++S C+ + +A +F MK D F+P+ Y
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 193/372 (51%), Gaps = 3/372 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
+ ++ + Y +++ + K Q + +L+ M +++ L+ + II+ + ++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDRFIPDSKTYSILL 207
A FN M+ G ++ + L+ C + ++ D +K + PD +S L+
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ L A E+ +EM+ G +PD VTY ++D CK ++D+A ++ M S C
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P +++L++ Y N I+D ++ F +M G++AD YN LI FC+ K + +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
++M S+ V P+ + I+L+GL GE ++A +F ++ K E D Y ++I C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
+++ A+ ++ + LK P + T++++I GLC KG +S++ +L M E G P+G T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 447 FGKLRKLLIKEG 458
+ L + + EG
Sbjct: 565 YNILIRAHLGEG 576
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 188/374 (50%), Gaps = 3/374 (0%)
Query: 100 YHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTFNVMQ 158
+ + +A+ +QY ++ DL M K + N+ T I++ R +K+ A +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 159 KYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLP 217
K G + F+ L++ LC V +A E+ D M + P T + L+ G + +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 218 RAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLV 277
A + MV+TG P+ VTYG ++ V+CK+G+ A+ +++ M+ + + YS+++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 278 HTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVA 337
+ +++A + F EME G AD+ +Y LI FC A ++ + ++L+DM + +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 338 PNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKV 396
P+ + +++ + G+ EA + + MI+ D TYT +I FC+ +L+KA +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 397 WKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIK 456
M K P++ TF++LING C ++ D L M +G+ T+ L + +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 457 EGREDVLKFLQEKM 470
G+ +V K L ++M
Sbjct: 435 LGKLEVAKELFQEM 448
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 37/362 (10%)
Query: 146 KVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIP-DSKTYS 204
KV +AV + M + G N + +L +CKS A E+ M++R I D+ YS
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 205 ILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDST 264
I+++G KD +L A +F EM G DI+ Y ++ C AGR D+ +++ M
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 265 VCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNV 324
P +S L+ + E ++ +A + EM + GI D Y +LI FCK N+
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 325 YRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKM 383
+L M SKG PN RT NI++NG D+ +FR+M ++ AD TY +I+
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 384 FCQ-----------------------------------GGELEKAFKVWKYMKLKRFIPS 408
FC+ GE EKA ++++ ++ +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQE 468
+ ++++I+G+C+ V D+ L + KG++P +T+ + L K+G L
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 469 KM 470
KM
Sbjct: 552 KM 553
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 139/265 (52%), Gaps = 5/265 (1%)
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
T+ ++ + + ++++A + ++M G N+ FN L++ CK+ + E+F M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 193 KDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
R + D+ TY+ L++G+ + L A+E+F+EMV PDIV+Y I++D LC G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
++AL I + ++ + IY++++H ++++DA D F + G+ DV YN +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC- 370
IG CK + + M G +PN T NI++ +G G+ ++ ++ IK C
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE-IKRCG 592
Query: 371 -EADADTYTMMIKMFCQGGELEKAF 394
DA T M++ M G L+K+F
Sbjct: 593 FSVDASTVKMVVDML-SDGRLKKSF 616
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Query: 282 VENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSR 341
V+ + +DAVD F EM ++ + ++ L + ++ V + K M KG+A N
Sbjct: 49 VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 342 TCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYM 400
T +I++N + A+ ++IKL E D T++ +I C G + +A ++ M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 401 KLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGRE 460
P++ T + L+NGLC G VSD+ +L++ M+E G +P+ T+G + K++ K G+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 461 DVLKFLQEKM 470
+ L KM
Sbjct: 229 ALAMELLRKM 238
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 219 AREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVH 278
A ++F+EM + P ++ + + V+ + + D L + K M+ + S++++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 279 TYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAP 338
++ A ++ K G D ++ LI C + ++ M G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 339 NSRTCNIILNGLIGRGETDEAYRVFRRMIK----------------LCEA---------- 372
T N ++NGL G+ +A + RM++ +C++
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 373 ----------DADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDK 422
DA Y+++I C+ G L+ AF ++ M++K F + ++ LI G C
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 423 GIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
G D LL DMI++ I P F L +KEG+
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 201/378 (53%), Gaps = 3/378 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLN-VETFCIIMRKYARVQKVEEAVYTF 154
+V ++ + ++AK +QY+++ L M +K + + + T I++ + R +K+ A T
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTM 146
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
+ K G + FN LL+ LC V +A E+ D M + P T + L+ G +
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
+ A + MV+TG P+ VTYG +++V+CK+G+ A+ +++ M+ + + Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
S+++ + +++A + F EME G AD+ YN LIG FC A ++ + ++L+DM
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEA-DADTYTMMIKMFCQGGELEK 392
+ ++PN T +++++ + G+ EA ++ + M++ A + TY +I FC+ LE+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A ++ M K P + TF++LING C + D L +M +G+ + T+ L +
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 453 LLIKEGREDVLKFLQEKM 470
+ G+ +V K L ++M
Sbjct: 447 GFCQSGKLEVAKKLFQEM 464
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 187/364 (51%), Gaps = 3/364 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
+ ++ + Y ++ + K Q + +L+ M + + L+ + II+ + ++
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDRFIPDSKTYSILL 207
A FN M+ G ++ +N L+ C + ++ D +K + P+ T+S+L+
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ L A ++ +EM+ G P+ +TY ++D CK R++EA+ +V M S C
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P +++L++ Y NRI+D ++ F EM G++A+ YN L+ FC++ K + ++
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
++M S+ V P+ + I+L+GL GE ++A +F ++ K E D Y ++I C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
+++ A+ ++ + LK ++++I+ LC K +S + +L M E+G P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 447 FGKL 450
+ L
Sbjct: 581 YNIL 584
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 37/339 (10%)
Query: 146 KVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIP-DSKTYS 204
KV +AV + M + G N + +L+ +CKS A E+ M++R I D+ YS
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 205 ILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDST 264
I+++G KD +L A +F EM G DI+TY ++ C AGR D+ +++ M
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 265 VCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNV 324
P +SVL+ ++ E ++ +A EM + GI + YN+LI FCK N+ +
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 325 YRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKM 383
+++ M SKG P+ T NI++NG D+ +FR M ++ A+ TY +++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 384 FCQGG-----------------------------------ELEKAFKVWKYMKLKRFIPS 408
FCQ G ELEKA +++ ++ +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETF 447
+ + ++I+G+C+ V D+ L + KG++ +
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 150/302 (49%), Gaps = 4/302 (1%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTF 154
+V + +I+S K + + L+ M + + N T+ ++ + + ++EEA+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
++M G ++ FN L++ CK+ + E+F M R I ++ TY+ L++G+ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
L A+++F+EMV PDIV+Y I++D LC G +++AL I ++ + IY
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+++H ++++DA D F + G+ D YN +I C+ + + + M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
+G AP+ T NI++ +G + A + M AD T M+I M GEL+K
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDK 630
Query: 393 AF 394
+F
Sbjct: 631 SF 632
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 8/312 (2%)
Query: 164 QNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIF 223
+NL+ + L S L K D ++ R +P ++ L K +
Sbjct: 52 RNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC 111
Query: 224 REMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVE 283
++M G I T IM++ C+ ++ A + + P + I++ L++ +E
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 284 NRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTC 343
R+ +A++ M + G + N L+ C K + ++ M G PN T
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 344 NIILNGLIGRGETDEAYRVFRRM----IKLCEADADTYTMMIKMFCQGGELEKAFKVWKY 399
+LN + G+T A + R+M IKL DA Y+++I C+ G L+ AF ++
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKL---DAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 400 MKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
M++K F + T++ LI G C+ G D LL DMI++ I P+ TF L +KEG+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 460 -EDVLKFLQEKM 470
+ + L+E M
Sbjct: 349 LREADQLLKEMM 360
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 181/357 (50%), Gaps = 7/357 (1%)
Query: 92 NYEHSVRAYHSMIESLAK---IRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVE 148
+E S+ + S++ + + M+D + M K NV + I+ + ++V+
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP--NVVIYNTIIDGLCKSKQVD 203
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
A+ N M+K G+ ++ +N L+S LC S A + CM R I PD T++ L+
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ K+ + A E + EM+ +PDIVTY +++ LC R+DEA + M S C
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P YS+L++ Y ++E + F EM + G++ + Y LI +C+A K +
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQ 386
+ M GV PN T N++L+GL G+ ++A + M K +AD TY ++I+ C+
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPS 443
GE+ A+ ++ + + +P + T++ ++ GL KG+ ++ L M E GI P+
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 181/380 (47%), Gaps = 6/380 (1%)
Query: 84 FKWAEKQQ-NYEHSVRAYHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKY 141
+ W + Q H++ + ++ + Q + + M + ++ TF ++ +
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 142 ARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFIPDS 200
R +V +A+Y F+ M G N+ +N ++ LCKSK V A ++ + M KD PD
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 201 KTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKS 260
TY+ L+ G A + M PD+ T+ ++D K GRV EA +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 261 MDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANK 320
M P YS+L++ + +R+++A + F M G DV Y+ LI +CK+ K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 321 FKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADAD--TYT 378
++ ++ +M+ +GV N+ T I++ G G+ + A +FRRM+ C + TY
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV-FCGVHPNIITYN 400
Query: 379 MMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEK 438
+++ C G++EKA + M+ + T++++I G+C G V+D+ + + +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 439 GIRPSGETFGKLRKLLIKEG 458
G+ P T+ + L K+G
Sbjct: 461 GLMPDIWTYTTMMLGLYKKG 480
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 181/368 (49%), Gaps = 7/368 (1%)
Query: 96 SVRAYHSMIESLAKIRQYQI---MWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVY 152
S+ + ++ +++K+++Y + +W+ + + N+ T I++ + R ++ A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH--NLCTCNILLNCFCRCSQLSLALS 137
Query: 153 TFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWG 211
M K G ++ F LL+ C+ V A +FD M + P+ Y+ +++G
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 212 KDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSF 271
K + A ++ M G PD+VTY ++ LC +GR +A +V M P F
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 272 IYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDM 331
++ L+ E R+ +A + + EM + + D+ Y+ LI C ++ + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 332 NSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEA-DADTYTMMIKMFCQGGEL 390
SKG P+ T +I++NG + + ++F M + + TYT++I+ +C+ G+L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 391 EKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
A ++++ M P++ T++VL++GLCD G + + V+L DM + G+ T+ +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 451 RKLLIKEG 458
+ + K G
Sbjct: 438 IRGMCKAG 445
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 170/343 (49%), Gaps = 2/343 (0%)
Query: 137 IMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRF 196
++R R K+++++ F M + ++A F+ LLSA+ K K +++ M+
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 197 IPDSK-TYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
IP + T +ILL + + L A +M+ G P IVT+G +++ C+ RV +AL
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 256 GIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAF 315
+ M +P IY+ ++ ++++A+D MEK+GI DV YN+LI
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 316 CKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADA 374
C + ++ + R++ M + + P+ T N +++ + G EA + MI+ + D
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 375 DTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLED 434
TY+++I C L++A +++ +M K P + T+S+LING C V L +
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 435 MIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEP 477
M ++G+ + T+ L + + G+ +V + + +M P
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 173/383 (45%), Gaps = 9/383 (2%)
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIM 138
FCF + A + Y M+ + + + DL M R L ++ F ++
Sbjct: 35 GFCFSRRAYSNGS------DYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLL 88
Query: 139 RKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFI 197
++++K + +Y + MQ G+ NL N LL+ C+ + A M K
Sbjct: 89 SAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE 148
Query: 198 PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGI 257
P T+ LL G+ + + A +F +MV G P++V Y ++D LCK+ +VD AL +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 258 VKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCK 317
+ M+ P Y+ L+ R DA M K I DV +NALI A K
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 318 ANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADT 376
+ ++M + + P+ T ++++ GL DEA +F M+ K C D T
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 377 YTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMI 436
Y+++I +C+ ++E K++ M + + + T+++LI G C G ++ + + M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 437 EKGIRPSGETFGKLRKLLIKEGR 459
G+ P+ T+ L L G+
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGK 411
>sp|Q9M2C8|PP291_ARATH Pentatricopeptide repeat-containing protein At3g61360
OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1
Length = 498
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 188/395 (47%), Gaps = 22/395 (5%)
Query: 61 VSPEIVEDVLEKFRNA---GTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMW 117
+SPE V +VL + A G A FFK++ K + ++ + LA++R + W
Sbjct: 64 LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123
Query: 118 DLVNAMRT--KRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQK------YGVTQNLAAF 169
L+ +R +L+ ++ I++ K A+ EE + F M+K +GV + F
Sbjct: 124 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE----F 179
Query: 170 NGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDT 229
N LL A C + +++A+ IF+ + RF PD KT +ILL G+ + ++ + EMV
Sbjct: 180 NILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKR 239
Query: 230 GCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDA 289
G P+ VTYGI +D CK EAL + + MD T I + L+H GV A
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKA 299
Query: 290 VDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNG 349
F E+ K G+ D YNAL+ + K +V+K+M KG+ P+S T + + G
Sbjct: 300 RQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 350 LIGRGETD-----EAYRVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKR 404
++ E E Y+ + + T M++K+FC GE+ +WKYM K
Sbjct: 360 MMKSKEFGFNGVCEYYQKMKE--RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 405 FIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKG 439
+ P H +L LC + +D+ +E+G
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 195/422 (46%), Gaps = 3/422 (0%)
Query: 51 DTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKI 110
+ L + PE V VL + ++ A +F+W E++ H +Y+S++ +A+
Sbjct: 53 ENTLSALSFKPQPEFVIGVLRRLKDVNR-AIEYFRWYERRTELPHCPESYNSLLLVMARC 111
Query: 111 RQYQIMWDLVNAMRTKRMLNVETFCIIM-RKYARVQKVEEAVYTFNVMQKYGVTQNLAAF 169
R + + ++ M CI M + K+ E +M+K+ +A+
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171
Query: 170 NGLLSALCKSKNVRKAQEIFDCMKD-RFIPDSKTYSILLEGWGKDPNLPRAREIFREMVD 228
L+ A + +F M++ + P ++ L+ G+ K+ + A + EM
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 229 TGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIED 288
+ + DIV Y + +D K G+VD A +++ +P Y+ ++ NR+++
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 289 AVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILN 348
AV+ F +EKN + YN +I + A KF Y +L+ +KG P+ N IL
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 349 GLIGRGETDEAYRVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPS 408
L G+ DEA +VF M K + TY ++I M C+ G+L+ AF++ M+ P+
Sbjct: 352 CLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 409 MHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQE 468
+ T +++++ LC + ++C + E+M K P TF L L K GR D + E
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 469 KM 470
KM
Sbjct: 472 KM 473
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 189/375 (50%), Gaps = 4/375 (1%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTFNVM 157
AY++MI ++ + L+ R K + +V + I+ ++ KV+EA+ F M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFIPDSKTYSILLEGWGKDPNL 216
+K NL+ +N L+ LC++ + A E+ D M K P+ +T +I+++ K L
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A +F EM C PD +T+ ++D L K GRVD+A + + M + CR S +Y+ L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
+ + R ED + +M D+ + N + KA + + + +++ ++
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFK 395
P++R+ +I+++GLI G +E Y +F M + C D Y ++I FC+ G++ KA++
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLI 455
+ + MK K F P++ T+ +I+GL + ++ +L E+ K I + + L
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 456 KEGREDVLKFLQEKM 470
K GR D + E++
Sbjct: 669 KVGRIDEAYLILEEL 683
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 178/373 (47%), Gaps = 4/373 (1%)
Query: 100 YHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQ 158
+ S+I+ L K+ + + + M + N + +++ + + E+ + M
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 159 KYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLP 217
+ +L N + + K+ K + +F+ +K R F+PD+++YSIL+ G K
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 218 RAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLV 277
E+F M + GC D Y I++D CK G+V++A +++ M + PT Y ++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 278 HTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVA 337
+R+++A F E + I +V +Y++LI F K + Y +L+++ KG+
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 338 PNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKV 396
PN T N +L+ L+ E +EA F+ M +L C + TY ++I C+ + KAF
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 397 WKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIK 456
W+ M+ + PS +++ +I+GL G ++++ L + G P + + + L
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 457 EGRE-DVLKFLQE 468
R D +E
Sbjct: 810 GNRAMDAFSLFEE 822
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 182/376 (48%), Gaps = 10/376 (2%)
Query: 100 YHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQ 158
Y SMI L K + ++ + + +R+ + ++ Y K +EA +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 159 KYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPR 218
G ++ A+N +L+ L K V +A ++F+ MK P+ TY+IL++ + L
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 219 AREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVH 278
A E+ M G P++ T IMVD LCK+ ++DEA + + MD VC P + L+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 279 TYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAP 338
G R++DA + +M + + +Y +LI F + ++ +++ KDM ++ +P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 339 NSRTCNIILNGLIGRGETDEAYRVF-----RRMIKLCEADADTYTMMIKMFCQGGELEKA 393
+ + N ++ + GE ++ +F RR + DA +Y+++I + G +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV----PDARSYSILIHGLIKAGFANET 571
Query: 394 FKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKL 453
++++ MK + + ++++I+G C G V+ + LLE+M KG P+ T+G +
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 454 LIKEGREDVLKFLQEK 469
L K R D L E+
Sbjct: 632 LAKIDRLDEAYMLFEE 647
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 191/428 (44%), Gaps = 38/428 (8%)
Query: 69 VLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM 128
+L R G + + E +++ ++ Y+ +I+ L + + ++L ++M+ +
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 129 L-NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQE 187
NV T I++ + + QK++EA F M T + F L+ L K V A +
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 188 IFDCMKDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLC 246
+++ M D +S Y+ L++ + +I+++M++ C+PD+ +D +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 247 KAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVA 306
KAG ++ + + + + P + YS+L+H + + F M++ G + D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 307 MYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM 366
YN +I FCK K Y++L++M +KG P T +++GL DEAY +F
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 367 -IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHT-------------- 411
K E + Y+ +I F + G +++A+ + + + K P+++T
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 412 ---------------------FSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
+ +LINGLC + + V ++M ++G++PS ++ +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 451 RKLLIKEG 458
L K G
Sbjct: 769 ISGLAKAG 776
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 35/263 (13%)
Query: 89 KQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKV 147
K + +E +V Y S+I+ LAKI + + L ++KR+ LNV + ++ + +V ++
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 148 EEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILL 207
+EA + + G+T NL +N LL AL K++ + E C
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI---NEALVC---------------- 714
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
F+ M + C P+ VTYGI+++ LCK + ++A + M +
Sbjct: 715 ---------------FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P++ Y+ ++ I +A F + NG + D A YNA+I N+ + + +
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 328 LKDMNSKGVAPNSRTCNIILNGL 350
++ +G+ +++TC ++L+ L
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTL 842
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 13/295 (4%)
Query: 82 CFFKWAE-----------KQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR-ML 129
C FK E K + + R+Y +I L K ++L +M+ + +L
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
+ + I++ + + KV +A M+ G + + ++ L K + +A +F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 190 DCMKDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
+ K + I + YS L++G+GK + A I E++ G P++ T+ ++D L KA
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
++EAL +SM C P Y +L++ + A + EM+K G+ Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVF 363
+I KA + + G P+S N ++ GL +A+ +F
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRT-KRMLNVETFCIIMRKYARVQKVE 148
Q+ ++ ++S++++L K + +M+ K N T+ I++ +V+K
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMK-DRFIPDSKTYSILL 207
+A + MQK G+ + ++ ++S L K+ N+ +A +FD K + +PDS Y+ ++
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEA 254
EG A +F E G T +++D L K +++A
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 189/372 (50%), Gaps = 3/372 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
Q+ + ++ Y ++ L K + +L+N M ++ +V F I+ + + V+
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDRFIPDSKTYSILL 207
+A+ F M+ G+ N+ ++ L+S LC A ++ D ++ + P+ T++ L+
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ A +++ +M+ +PDI TY +V+ C R+D+A + + M S C
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P Y+ L+ + R+ED + F EM G++ D Y LI N +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
K M S GV P+ T +I+L+GL G+ ++A VF M K + D YT MI+ C+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
G+++ + ++ + LK P++ T++ +I+GLC K ++ ++ LL+ M E G P+ T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 447 FGKLRKLLIKEG 458
+ L + +++G
Sbjct: 578 YNTLIRAHLRDG 589
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 187/369 (50%), Gaps = 3/369 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAVYTF 154
S+ ++ ++ ++AK++++ ++ L M R + + + T+ I++ + R ++ A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ + LL+ C K + A + D M + + PD+ T++ L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC P++VTYG++V+ LCK G D AL ++ M++ I+
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ + ++DA++ F EME GI +V Y++LI C ++ + ++L DM
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
K + PN T N +++ + G+ EA +++ MIK + D TY ++ FC L+K
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A +++++M K P + T++ LI G C V D L +M +G+ T+ L +
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 453 LLIKEGRED 461
L +G D
Sbjct: 444 GLFHDGDCD 452
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 175/358 (48%), Gaps = 7/358 (1%)
Query: 68 DVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR 127
D L K+R+ A FK E + +V Y S+I L ++ L++ M K+
Sbjct: 268 DSLCKYRHVDD-ALNLFKEME-TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 128 M-LNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQ 186
+ N+ TF ++ + + K EA ++ M K + ++ +N L++ C + KA+
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 187 EIFDCM--KDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDV 244
++F+ M KD F PD TY+ L++G+ K + E+FREM G D VTY ++
Sbjct: 386 QMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 245 LCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILAD 304
L G D A + K M S P YS+L+ ++E A++ F M+K+ I D
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 305 VAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFR 364
+ +Y +I CKA K + + + ++ KGV PN T N +++GL + EAY + +
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 365 RMIKLCE-ADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCD 421
+M + ++ TY +I+ + G+ + ++ + M+ RF+ T ++ N L D
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 8/301 (2%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCI--IMRKYARVQKVEEAVYTFNV 156
++++I++ K ++ L + M KR ++ + F ++ + ++++A F
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 157 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPN 215
M ++ +N L+ CKSK V E+F M R + D+ TY+ L++G D +
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 216 LPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSV 275
A+++F++MV G PDI+TY I++D LC G++++AL + M + + +IY+
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 276 LVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKG 335
++ +++D D F + G+ +V YN +I C + Y +LK M G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 336 VAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCE--ADADTYTMMIKMFCQGGELEKA 393
PNS T N ++ + G+ + + R M + C DA T ++ M G L+K+
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTIGLVANML-HDGRLDKS 628
Query: 394 F 394
F
Sbjct: 629 F 629
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 143/324 (44%), Gaps = 35/324 (10%)
Query: 137 IMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRF 196
I+R K+++A+ F M K ++ FN LLSA+ K K FD +
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKK-------FDVV---- 104
Query: 197 IPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALG 256
+ ++ R + G + TY I+++ C+ ++ AL
Sbjct: 105 -------------------ISLGEKMQRLEIVHG----LYTYNILINCFCRRSQISLALA 141
Query: 257 IVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFC 316
++ M P+ S L++ Y RI DAV +M + G D + LI
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 317 KANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADAD 375
NK ++ M +G PN T +++NGL RG+TD A + +M EAD
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 376 TYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDM 435
+ +I C+ ++ A ++K M+ K P++ T+S LI+ LC G SD+ LL DM
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 436 IEKGIRPSGETFGKLRKLLIKEGR 459
IEK I P+ TF L +KEG+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGK 345
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
+++DA+ F M K+ L + +N L+ A K KF V + + M + T N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 345 IILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLK 403
I++N R + A + +M+KL E T + ++ +C G + A + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVL 463
+ P TF+ LI+GL S++ L++ M+++G +P+ T+G + L K G D+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 464 KFLQEKM 470
L KM
Sbjct: 245 LNLLNKM 251
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 194/383 (50%), Gaps = 4/383 (1%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
Q+ + + Y +++ L K + L+ M ++ +V + I+ + + ++
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
+A+ F M G+ ++ ++ L+S LC A + M +R I P+ T+S L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ L A +++ EM+ +PDI TY +++ C R+DEA + + M S C
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P YS L+ + R+E+ ++ F EM + G++ + Y LI F +A N V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQ 386
K M S GV PN T NI+L+GL G+ +A VF + + E D TY +MI+ C+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
G++E ++++ + LK P++ ++ +I+G C KG ++ LL+ M E G P+ T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 447 FGKLRKLLIKEG-REDVLKFLQE 468
+ L + +++G RE + ++E
Sbjct: 576 YNTLIRARLRDGDREASAELIKE 598
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 185/358 (51%), Gaps = 3/358 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ ++ ++ ++AK+ +++++ L M+T + ++ T+ I + + R ++ A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ + LL+ C SK + A + D M + + PD+ T++ L+ G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + +MV GC PD+VTYG +V+ LCK G +D AL ++K M+ IY
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ ++DA++ F EM+ GI DV Y++LI C ++ + R+L DM
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
+ + PN T + +++ + G+ EA +++ MIK + D TY+ +I FC L++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
A +++ M K P++ T+S LI G C V + L +M ++G+ + T+ L
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 170/340 (50%), Gaps = 2/340 (0%)
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
T+ ++ + ++ A+ M+K + ++ +N ++ LCK K++ A +F M
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 193 KDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
++ I PD TYS L+ A + +M++ NP++VT+ ++D K G++
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
EA + M P F YS L++ + + +R+++A F M +V Y+ L
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-C 370
I FCKA + + + ++M+ +G+ N+ T +++G + D A VF++M+ +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
+ TY +++ C+ G+L KA V++Y++ P ++T++++I G+C G V D
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
L ++ KG+ P+ + + ++G ++ L +KM
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 138/268 (51%), Gaps = 5/268 (1%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
++ T+ ++ + +++EA + F +M N+ ++ L+ CK+K V + E+F
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 190 DCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
M R + ++ TY+ L+ G+ + + A+ +F++MV G +P+I+TY I++D LCK
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G++ +A+ + + + + P + Y++++ ++ED + F + G+ +V Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK 368
N +I FC+ + +LK M G PNS T N ++ + G+ + + + + M +
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM-R 600
Query: 369 LC--EADADTYTMMIKMFCQGGELEKAF 394
C DA T ++ M G L+K+F
Sbjct: 601 SCGFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 128/280 (45%), Gaps = 2/280 (0%)
Query: 182 VRKAQEIF-DCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGI 240
V A ++F D +K R P ++ LL K + +M G + D+ TY I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 241 MVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 300
++ C+ ++ AL ++ M P S L++ Y RI DAV +M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 301 ILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAY 360
D + LI NK ++ M +G P+ T ++NGL RG+ D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 361 RVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGL 419
+ ++M K EAD Y +I C+ ++ A ++ M K P + T+S LI+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 420 CDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
C+ G SD+ LL DMIE+ I P+ TF L +KEG+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
+++DAVD F +M K+ + +N L+ A K NKF+ V + + M + G++ + T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 345 IILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLK 403
I +N R + A V +M+KL E D T + ++ +C + A + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVL 463
+ P TF+ LI+GL S++ L++ M+++G +P T+G + L K G D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 464 KFLQEKM 470
L +KM
Sbjct: 243 LSLLKKM 249
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 115/295 (38%), Gaps = 46/295 (15%)
Query: 207 LEGWGKDPNLPRAREIFREMVDTGCNPDIVTYG------IMVDVLCKAGRVDEALGIVKS 260
L+G G P +P F + +GC I+ + L +VD+A+ +
Sbjct: 18 LQGIGNPPTVPS----FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGD 73
Query: 261 MDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANK 320
M + P+ ++ L+ N+ E + +M+ GI D+ Y+ I FC+ ++
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 321 FKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL----------- 369
VL M G P+ T + +LNG +A + +M+++
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 370 -------------------------CEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKR 404
C+ D TY ++ C+ G+++ A + K M+ +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 405 FIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
+ ++ +I+GLC + D+ L +M KGIRP T+ L L GR
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 185/369 (50%), Gaps = 3/369 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAVYTF 154
S+ ++ ++ ++AK++++ ++ L M R N+ T+ I++ + R ++ A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ + LL+ C K + A + D M + + PD+ T++ L+ G
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC P++VTYG++V+ LCK G +D A ++ M++ I+
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ + ++DA++ F EME GI +V Y++LI C ++ + ++L DM
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
K + PN T N +++ + G+ EA ++ MIK + D TY +I FC L+K
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A +++++M K P + T++ LI G C V D L +M +G+ T+ L +
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 453 LLIKEGRED 461
L +G D
Sbjct: 369 GLFHDGDCD 377
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 188/372 (50%), Gaps = 3/372 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
Q+ + ++ Y ++ L K + ++L+N M ++ +V F I+ + + V+
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDRFIPDSKTYSILL 207
+A+ F M+ G+ N+ ++ L+S LC A ++ D ++ + P+ T++ L+
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ A ++ +M+ +PDI TY +++ C R+D+A + + M S C
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P Y+ L+ + R+ED + F EM G++ D Y LI N +V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
K M S GV P+ T +I+L+GL G+ ++A VF M K + D YT MI+ C+
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
G+++ + ++ + LK P++ T++ +I+GLC K ++ ++ LL+ M E G P T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 447 FGKLRKLLIKEG 458
+ L + +++G
Sbjct: 503 YNTLIRAHLRDG 514
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 174/358 (48%), Gaps = 7/358 (1%)
Query: 68 DVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR 127
D L K+R+ A FK E + +V Y S+I L ++ L++ M K+
Sbjct: 193 DSLCKYRHVDD-ALNLFKEME-TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 128 M-LNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQ 186
+ N+ TF ++ + + K EA + M K + ++ +N L++ C + KA+
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 187 EIFDCM--KDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDV 244
++F+ M KD F PD TY+ L++G+ K + E+FREM G D VTY ++
Sbjct: 311 QMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 245 LCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILAD 304
L G D A + K M S P YS+L+ ++E A++ F M+K+ I D
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 305 VAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFR 364
+ +Y +I CKA K + + + ++ KGV PN T N +++GL + EAY + +
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 365 RMIKLCE-ADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCD 421
+M + D+ TY +I+ + G+ + ++ + M+ RF+ T ++ N L D
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 547
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 132/268 (49%), Gaps = 5/268 (1%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
++ T+ ++ + ++++A F M +L +N L+ CKSK V E+F
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 190 DCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
M R + D+ TY+ L++G D + A+++F++MV G PDI+TY I++D LC
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G++++AL + M + + +IY+ ++ +++D D F + G+ +V Y
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK 368
N +I C + Y +LK M G P+S T N ++ + G+ + + R M +
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-R 527
Query: 369 LCE--ADADTYTMMIKMFCQGGELEKAF 394
C DA T ++ M G L+K+F
Sbjct: 528 SCRFVGDASTIGLVANML-HDGRLDKSF 554
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 1/269 (0%)
Query: 192 MKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
+K R +P ++ LL K + +M G + ++ TY I+++ C+ ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
AL ++ M P+ S L++ Y RI DAV +M + G D + L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLC 370
I NK ++ M +G PN T +++NGL RG+ D A+ + +M
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
EAD + +I C+ ++ A ++K M+ K P++ T+S LI+ LC G SD+
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
LL DMIEK I P+ TF L +KEG+
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 2/304 (0%)
Query: 169 FNGLLSALCKSKNVRKAQEIFDCMKDRFIPDS-KTYSILLEGWGKDPNLPRAREIFREMV 227
FN LLSA+ K K + + M+ I + TY+IL+ + + + A + +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 228 DTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIE 287
G P IVT +++ C R+ +A+ +V M RP + ++ L+H + N+
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 288 DAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIIL 347
+AV M + G ++ Y ++ CK + +L M + + + N I+
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 348 NGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFI 406
+ L D+A +F+ M K + TY+ +I C G A ++ M K+
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 407 PSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFL 466
P++ TF+ LI+ +G ++ L +DMI++ I P T+ L R D K +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 467 QEKM 470
E M
Sbjct: 313 FEFM 316
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 296 MEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGE 355
M K+ L + +N L+ A K KF V + + M G++ N T NI++N R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 356 TDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSV 414
A + +M+KL E T + ++ +C G + A + M + P TF+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 415 LINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
LI+GL S++ L++ M+++G +P+ T+G + L K G D+ L KM
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 198/407 (48%), Gaps = 5/407 (1%)
Query: 49 VLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQ-QNYEHSVRAYHSMIESL 107
V+D +D+ G++ +L + +L A+ + V ++ +I++L
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 108 AKIRQYQIMWDLVNAMRTKRMLNVE-TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNL 166
+ Q + ++ M + ++ E TF +M+ Y ++ A+ M ++G + +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 167 AAFNGLLSALCKSKNVRKAQEIFDCM--KDRFIPDSKTYSILLEGWGKDPNLPRAREIFR 224
+ N ++ CK V A M +D F PD T++ L+ G K ++ A EI
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 225 EMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVEN 284
M+ G +PD+ TY ++ LCK G V EA+ ++ M + C P + Y+ L+ T EN
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
++E+A + + GIL DV +N+LI C + + ++M SKG P+ T N
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 345 IILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLK 403
++++ L +G+ DEA + ++M + C TY +I FC+ + +A +++ M++
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
+ T++ LI+GLC V D+ L++ MI +G +P T+ L
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 182/366 (49%), Gaps = 3/366 (0%)
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIM 138
A F + Q + +++++ L K + ++++ M + +V T+ ++
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 139 RKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FI 197
++ +V+EAV + M + N +N L+S LCK V +A E+ + + +
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 198 PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGI 257
PD T++ L++G N A E+F EM GC PD TY +++D LC G++DEAL +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 258 VKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCK 317
+K M+ + C + Y+ L+ + N+ +A + F EME +G+ + YN LI CK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 318 ANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADT 376
+ + ++ +++ M +G P+ T N +L G+ +A + + M CE D T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 377 YTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMI 436
Y +I C+ G +E A K+ + +++K + H ++ +I GL K +++ L +M+
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 437 EKGIRP 442
E+ P
Sbjct: 638 EQNEAP 643
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 190/417 (45%), Gaps = 41/417 (9%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR-MLNVETFCIIMRKYARVQKVE 148
Q+ Y+ V Y+S+I L K+ + + ++++ M T+ N T+ ++ + +VE
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFD------CMKDRF----IP 198
EA V+ G+ ++ FN L+ LC ++N R A E+F+ C D F +
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 199 DSK--------------------------TYSILLEGWGKDPNLPRAREIFREMVDTGCN 232
DS TY+ L++G+ K A EIF EM G +
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 233 PDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDT 292
+ VTY ++D LCK+ RV++A ++ M +P + Y+ L+ + I+ A D
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 293 FLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIG 352
M NG D+ Y LI CKA + + ++L+ + KG+ N ++ GL
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 353 RGETDEAYRVFRRMIKLCEA--DADTYTMMIKMFCQ-GGELEKAFKVWKYMKLKRFIPSM 409
+ +T EA +FR M++ EA DA +Y ++ + C GG + +A + K F+P
Sbjct: 623 KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682
Query: 410 HTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFL 466
+ +L GL + ++ V L +M+ + R S E ++ LL +D L L
Sbjct: 683 SSLYMLAEGLLTLSM-EETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATL 738
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 217/512 (42%), Gaps = 79/512 (15%)
Query: 43 LSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNA--GTLAFCFFKWAEKQQNYEHSVRAY 100
L+ P + A S S ++ +L+ R+ + A F A K+ N+ Y
Sbjct: 29 LTPPSSTISFASPHSAALSSTDV--KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALY 86
Query: 101 HSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFN---- 155
++ L + + M ++ M++ R + TF I++ YA+ + +E + +
Sbjct: 87 EEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID 146
Query: 156 --------------------------------VMQKYGVTQNLAAFNGLLSALCKSKNVR 183
M +G+ +++ FN L+ ALC++ +R
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 184 KAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMV 242
A + + M +PD KT++ +++G+ ++ +L A I +MV+ GC+ V+ ++V
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 243 DVLCKAGRVDEALGIVKSM-DSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGI 301
CK GRV++AL ++ M + P + ++ LV+ ++ A++ M + G
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 302 LADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYR 361
DV YN++I CK + K VL M ++ +PN+ T N +++ L + +EA
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 362 VFRRMI------------------------------------KLCEADADTYTMMIKMFC 385
+ R + K CE D TY M+I C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 386 QGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGE 445
G+L++A + K M+L S+ T++ LI+G C ++ + ++M G+ +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 446 TFGKLRKLLIKEGREDVLKFLQEKMNLLVKEP 477
T+ L L K R + L ++M + ++P
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 181/358 (50%), Gaps = 3/358 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ + ++ ++AK+ ++ ++ L M+ + N+ T+ I++ + R ++ A+
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ N LL+ C + A + M + + PDS T++ L+ G +
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC PD+VTYGI+V+ LCK G +D AL ++K M+ P IY
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ + DA++ F EM+ GI +V YN+LI C ++ + R+L DM
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
+ + PN T + +++ + G+ EA +++ MIK + D TY+ +I FC L++
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
A +++ M K P++ T++ LI G C V + L +M ++G+ + T+ L
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 180/363 (49%), Gaps = 3/363 (0%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y ++ L K + L+ M ++ V + I+ + V +A+ F M
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKDPNL 216
G+ N+ +N L+ LC A + M +R I P+ T+S L++ + K+ L
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A +++ EM+ +PDI TY +++ C R+DEA + + M S C P Y+ L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
+ + R+++ ++ F EM + G++ + Y LI F +A + N V K M S GV
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFK 395
P+ T +I+L+GL G+ + A VF + + E D TY +MI+ C+ G++E +
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLI 455
++ + LK P++ T++ +++G C KG+ ++ L +M E+G P T+ L + +
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 456 KEG 458
++G
Sbjct: 583 RDG 585
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 193/399 (48%), Gaps = 15/399 (3%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR-MLNVETFCIIMRKYARVQKVE 148
+ Y+ ++++I L + + LV+ M K ++ T+ I++ + ++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
A+ M++ + + +N ++ ALC KNV A +F M ++ I P+ TY+ L+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
A + +M++ NP++VT+ ++D K G++ EA + M
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P F YS L++ + + +R+++A F M +V YN LI FCKA + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQ 386
++M+ +G+ N+ T +++G E D A VF++M+ D TY++++ C
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
G++E A V++Y++ + P ++T++++I G+C G V D L + KG++P+ T
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 447 FGKLRKLLIKEGREDVLKFLQEKMNLLVKE-----PLCD 480
+ + ++G L+E+ + L +E PL D
Sbjct: 539 YTTMMSGFCRKG-------LKEEADALFREMKEEGPLPD 570
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 182/386 (47%), Gaps = 5/386 (1%)
Query: 79 LAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCII 137
LA K E Q E V Y+++I++L + +L M K + NV T+ +
Sbjct: 239 LALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 138 MRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI 197
+R + +A + M + + N+ F+ L+ A K + +A++++D M R I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 198 -PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALG 256
PD TYS L+ G+ L A+ +F M+ C P++VTY ++ CKA RVDE +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 257 IVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFC 316
+ + M + Y+ L+H + ++A F +M +G+L D+ Y+ L+ C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 317 KANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADAD 375
K + V + + + P+ T NI++ G+ G+ ++ + +F + +K + +
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 376 TYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDM 435
TYT M+ FC+ G E+A +++ MK + +P T++ LI G + S L+ +M
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 436 IEKGIRPSGETFGKLRKLLIKEGRED 461
T G + +L +GR D
Sbjct: 598 RSCRFVGDASTIGLVTNML-HDGRLD 622
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 170/359 (47%), Gaps = 25/359 (6%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFC-FFKWAEK--------QQNYEHSVRAY 100
L T +D GIR P +V N+ C + +W++ ++ +V +
Sbjct: 278 LFTEMDNKGIR--PNVVT------YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 101 HSMIESLAKIRQYQIMWDLVNAMRTKRMLNVE--TFCIIMRKYARVQKVEEAVYTFNVMQ 158
++I++ K + L + M KR ++ + T+ ++ + +++EA + F +M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 159 KYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLP 217
N+ +N L+ CK+K V + E+F M R + ++ TY+ L+ G+ +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 218 RAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLV 277
A+ +F++MV G PDI+TY I++D LC G+V+ AL + + + + P + Y++++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 278 HTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVA 337
++ED D F + G+ +V Y ++ FC+ + + ++M +G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 338 PNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCE--ADADTYTMMIKMFCQGGELEKAF 394
P+S T N ++ + G+ + + R M + C DA T ++ M G L+K+F
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTIGLVTNML-HDGRLDKSF 625
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 213 DPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFI 272
D L A +F +MV + P IV + ++ + K + D + + + M + +
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 273 YSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMN 332
YS+L++ + +++ A+ +M K G D+ N+L+ FC N+ + ++ M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 333 SKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELE 391
G P+S T N +++GL EA + RM +K C+ D TY +++ C+ G+++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 392 KAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLR 451
A + K M+ + P + ++ +I+ LC+ V+D+ L +M KGIRP+ T+ L
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 452 KLLIKEGR 459
+ L GR
Sbjct: 299 RCLCNYGR 306
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 190 DCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAG 249
D +K R P +S LL K + +M + G + ++ TY I+++ C+
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 250 RVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYN 309
++ AL ++ M P + L++ + NRI DAV +M + G D +N
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 310 ALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK- 368
LI + N+ ++ M KG P+ T I++NGL RG+ D A + ++M +
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 369 LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDS 428
E Y +I C + A ++ M K P++ T++ LI LC+ G SD+
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 429 CVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
LL DMIE+ I P+ TF L +KEG+
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
+++DAV+ F +M K+ + ++ L+ A K NKF V + + M + G++ N T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 345 IILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLK 403
I++N R + A V +M+KL E D T ++ FC G + A + M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVL 463
+ P TF+ LI+GL S++ L++ M+ KG +P T+G + L K G D+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 464 KFLQEKMNLLVKEP 477
L +KM EP
Sbjct: 241 LSLLKKMEQGKIEP 254
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 165/307 (53%), Gaps = 4/307 (1%)
Query: 137 IMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMKDR 195
I+ + ++V +A F +++ G+ N+ + L++ LC S A + D +K +
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 196 FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
P+ TYS LL+ + K+ + A+E+F EMV +PDIVTY +++ LC R+DEA
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 256 GIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAF 315
+ M S C Y+ L++ + R+ED + F EM + G++++ YN LI F
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 316 CKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADAD 375
+A M+ G++P+ T NI+L GL GE ++A +F M K E D D
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLD 434
Query: 376 --TYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLE 433
TYT +I+ C+ G++E+A+ ++ + LK P + T++ +++GLC KG++ + L
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 434 DMIEKGI 440
M ++G+
Sbjct: 495 KMKQEGL 501
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 170/336 (50%), Gaps = 2/336 (0%)
Query: 137 IMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRF 196
++ + R +V +AV + M + G ++ A+N ++ +LCK+K V A + F ++ +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 197 I-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
I P+ TY+ L+ G A + +M+ P+++TY ++D K G+V EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 256 GIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAF 315
+ + M P YS L++ + +RI++A F M G LADV YN LI F
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 316 CKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADA 374
CKA + ++ ++ ++M+ +G+ N+ T N ++ G G+ D+A F +M D
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 375 DTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLED 434
TY +++ C GELEKA +++ M+ + + T++ +I G+C G V ++ L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 435 MIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
+ KG++P T+ + L +G ++ L KM
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 164/339 (48%), Gaps = 12/339 (3%)
Query: 146 KVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSK------NVRKAQEIFDCMKDRFIPD 199
K+ +A+ F+ M K ++ FN LLSA+ K K ++ K E+ D +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY--- 121
Query: 200 SKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVK 259
T++I++ + + A I +M+ G PD VT G +V+ C+ RV +A+ +V
Sbjct: 122 --TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 260 SMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKAN 319
M +P Y+ ++ + R+ DA D F E+E+ GI +V Y AL+ C ++
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 320 KFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYT 378
++ + R+L DM K + PN T + +L+ + G+ EA +F M+++ + D TY+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 379 MMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEK 438
+I C +++A +++ M K + + +++ LING C V D L +M ++
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 439 GIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEP 477
G+ + T+ L + + G D + +M+ P
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
++ T+ ++ +++EA F++M G ++ ++N L++ CK+K V ++F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 190 DCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
M R + ++ TY+ L++G+ + ++ +A+E F +M G +PDI TY I++ LC
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G +++AL I + M Y+ ++ ++E+A F + G+ D+ Y
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRT 342
++ C V + M +G+ N T
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 34/266 (12%)
Query: 212 KDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSF 271
+D L A ++F +MV + P IV + ++ + K + D + + K M+ R +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 272 IYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDM 331
++++++ + ++ A+ +M K G D +L+ FC+ N+ + ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 332 NSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADADTYTMMIKMFCQGGELE 391
G P D Y +I C+ +
Sbjct: 182 VEIGYKP----------------------------------DIVAYNAIIDSLCKTKRVN 207
Query: 392 KAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLR 451
AF +K ++ K P++ T++ L+NGLC+ SD+ LL DMI+K I P+ T+ L
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 452 KLLIKEGREDVLKFLQEKMNLLVKEP 477
+K G+ K L E+M + +P
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDP 293
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 123 MRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKN 181
M+ + M L++ T+ ++R + KVEEA F + G+ ++ + ++S LC
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 182 VRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIV 236
+ + + ++ MK + + T S D ++ + E+ ++M+ G P ++
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 176/355 (49%), Gaps = 3/355 (0%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y ++ L K + DL M + + +V + I++ + ++A+ FN M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNL 216
+ G+ ++ ++ L+ LC ++ M R IPD T+S L++ + K+ L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A+E++ EM+ G PD +TY ++D CK + EA + M S C P YS+L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
+++Y R++D + F E+ G++ + YN L+ FC++ K + ++M S+GV
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGELEKAFK 395
P+ T I+L+GL GE ++A +F +M K Y ++I C +++ A+
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
++ + K P + T++V+I GLC KG +S++ +L M E G P T+ L
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 166/340 (48%), Gaps = 2/340 (0%)
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
TF ++ + +V EAV + M + +L + L++ LC V +A + D M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 193 KDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
+ F PD TY +L K N A ++FR+M + +V Y I++D LCK G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
D+AL + M+ + YS L+ + + +D EM I+ DV ++AL
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLC 370
I F K K + +M ++G+AP++ T N +++G EA ++F M+ K C
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
E D TY+++I +C+ ++ ++++ + K IP+ T++ L+ G C G ++ +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
L ++M+ +G+ PS T+G L L G + + EKM
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 171/340 (50%), Gaps = 2/340 (0%)
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
T+ ++ + + A+ F M++ + ++ ++ ++ +LCK + A +F+ M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 193 KDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
+ + I D TYS L+ G D ++ REM+ PD+VT+ ++DV K G++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
EA + M + P + Y+ L+ + EN + +A F M G D+ Y+ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLC 370
I ++CKA + + R+ ++++SKG+ PN+ T N ++ G G+ + A +F+ M+ +
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
TY +++ C GEL KA ++++ M+ R + ++++I+G+C+ V D+
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
L + +KG++P T+ + L K+G L KM
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 186/394 (47%), Gaps = 41/394 (10%)
Query: 69 VLEKFRNAG--TLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTK 126
VL + +G LA F+ E ++N + SV Y +I+SL K + L N M K
Sbjct: 216 VLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 127 RM-LNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKA 185
+ +V T+ ++ K ++ M + ++ F+ L+ K + +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 186 QEIFDCMKDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDV 244
+E+++ M R I PD+ TY+ L++G+ K+ L A ++F MV GC PDIVTY I+++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 245 LCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVH-------------------------- 278
CKA RVD+ + + + + S P + Y+ LV
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 279 --TYGV-------ENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLK 329
TYG+ + A++ F +M+K+ + + +YN +I C A+K + + +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 330 DMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGG 388
++ KGV P+ T N+++ GL +G EA +FR+M + C D TY ++I+ G
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 389 ELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDK 422
L + ++ + MK+ F T ++I+ L D+
Sbjct: 575 GLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 152/308 (49%), Gaps = 6/308 (1%)
Query: 91 QNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEE 149
+N V + ++I+ K + +L N M T+ + + T+ ++ + + + E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 150 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLE 208
A F++M G ++ ++ L+++ CK+K V +F + + IP++ TY+ L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 209 GWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRP 268
G+ + L A+E+F+EMV G P +VTYGI++D LC G +++AL I + M +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 269 TSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVL 328
IY++++H ++++DA F + G+ DV YN +IG CK +
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 329 KDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC--EADADTYTMMIKMFCQ 386
+ M G P+ T NI++ +G + + M K+C AD+ T M+I M
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM-KVCGFSADSSTIKMVIDMLSD 607
Query: 387 GGELEKAF 394
L+K+F
Sbjct: 608 -RRLDKSF 614
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 42/286 (14%)
Query: 213 DPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMD---------- 262
D + A ++F M+ + P + + + + + + D LG K M+
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 263 -----STVCR--------------------PTSFIYSVLVHTYGVENRIEDA---VDTFL 294
+ CR P + +S LV+ + +E R+ +A VD +
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 295 EMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRG 354
EM++ D+ + LI C + ++ M G P+ T +LN L G
Sbjct: 168 EMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 355 ETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFS 413
+ A +FR+M + +A Y+++I C+ G + A ++ M++K + T+S
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 414 VLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
LI GLC+ G D +L +MI + I P TF L + +KEG+
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 282 VENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSR 341
V+ ++ DA+D F M ++ L +N L A + ++ V K M G+ +
Sbjct: 47 VDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 342 TCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYM 400
T I++N + + A+ V R KL E D T++ ++ FC G + +A + M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 401 KLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGRE 460
+ P + T S LINGLC KG VS++ VL++ M+E G +P T+G + L K G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 461 ----DVLKFLQEK 469
D+ + ++E+
Sbjct: 227 ALALDLFRKMEER 239
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 2/221 (0%)
Query: 250 RVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYN 309
+V++A+ + +SM + PT ++ L + + + ME NGI D+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 310 ALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL 369
+I +C+ K + VL G P++ T + ++NG G EA + RM+++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 370 CE-ADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDS 428
+ D T + +I C G + +A + M F P T+ ++N LC G + +
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 429 CVLLEDMIEKGIRPSGETFGKLRKLLIKEGR-EDVLKFLQE 468
L M E+ I+ S + + L K+G +D L E
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 183/363 (50%), Gaps = 3/363 (0%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y ++I L K + + +L+N M ++ +V + ++ + + V++A+ F M
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKDPNL 216
G+ ++ ++ L+S LC A + M +R I P+ T++ L++ + K+ L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A ++F EM+ +P+IVTY +++ C R+DEA I M S C P Y+ L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
++ + ++ D ++ F +M + G++ + Y LI F +A+ N V K M S GV
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFK 395
PN T N +L+GL G+ ++A VF + K E D TY +M + C+ G++E +
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLI 455
++ + LK P + ++ +I+G C KG+ ++ L M E G P T+ L + +
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 456 KEG 458
++G
Sbjct: 567 RDG 569
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 3/358 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ + ++ ++AK++++ ++ M + N+ T+ I++ R ++ A+
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ N LL+ C + +A + D M + + PD+ T++ L+ G +
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC PD+VTYG +++ LCK G D AL ++ M+ IY
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
S ++ + ++DA++ F EM+ GI DV Y++LI C ++ + R+L DM
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEK 392
+ + PN T N +++ G+ EA ++F MI + + + TY +I FC L++
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
A +++ M K +P + T++ LING C V D L DM +G+ + T+ L
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 175/356 (49%), Gaps = 3/356 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR-MLNVETFCIIMRKYARVQKVE 148
+ Y+ + +++ L + + LV M K ++ T+ ++ + + +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
A+ N M+K + ++ ++ ++ +LCK ++V A +F M ++ I PD TYS L+
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
A + +M++ NP++VT+ ++D K G++ EA + M
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P Y+ L++ + + +R+++A F M L DV YN LI FCKA K + +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQ 386
+DM+ +G+ N+ T +++G + D A VF++M+ + TY ++ C+
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRP 442
G+LEKA V++Y++ + P ++T++++ G+C G V D L + KG++P
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 168/357 (47%), Gaps = 21/357 (5%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEK--------QQNYEHSVRAYH 101
L T +D GIR ++ N G +W++ ++ +V ++
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYG-------RWSDASRLLSDMLERKINPNVVTFN 314
Query: 102 SMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVMQKY 160
S+I++ AK + L + M + + N+ T+ ++ + +++EA F +M
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 161 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLPRA 219
++ +N L++ CK+K V E+F M R + ++ TY+ L+ G+ + + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 220 REIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHT 279
+ +F++MV G +P+I+TY ++D LCK G++++A+ + + + + P + Y+++
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 280 YGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPN 339
++ED D F + G+ DV YN +I FCK + Y + M G P+
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 340 SRTCNIILNGLIGRGETDEAYRVFRRMIKLCE--ADADTYTMMIKMFCQGGELEKAF 394
S T N ++ + G+ + + + M + C DA TY ++ M G L+K F
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 184 KAQEIFDCM-KDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMV 242
+A ++F M K R P +S LL K +M G + ++ TY IM+
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 243 DVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIL 302
+ LC+ ++ AL I+ M P+ + L++ + NRI +AV +M + G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 303 ADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRV 362
D + L+ + NK +++ M KG P+ T ++NGL RGE D A +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 363 FRRMIK-LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCD 421
+M K EAD Y+ +I C+ ++ A ++ M K P + T+S LI+ LC+
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 422 KGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
G SD+ LL DM+E+ I P+ TF L KEG+
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 216 LPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSV 275
L A ++F EMV + P IV + ++ + K + D + + M+ + Y++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 276 LVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKG 335
+++ +++ A+ +M K G + N+L+ FC N+ ++ M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 336 VAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAF 394
P++ T +++GL + EA + RM +K C+ D TY +I C+ GE + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 395 KVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLL 454
+ M+ + + +S +I+ LC V D+ L +M KGIRP T+ L L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 455 IKEGR 459
GR
Sbjct: 286 CNYGR 290
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
++++AVD F EM K+ + ++ L+ A K KF V + M GV+ N T N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 345 IILNGLIGRGETDEAYRVFRRMIKLCEADAD-TYTMMIKMFCQGGELEKAFKVWKYMKLK 403
I++N L R + A + +M+KL + T ++ FC G + +A + M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVL 463
+ P TF+ L++GL S++ L+E M+ KG +P T+G + L K G D+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 464 KFLQEKM 470
L KM
Sbjct: 225 LNLLNKM 231
>sp|P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820
OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1
Length = 546
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 200/418 (47%), Gaps = 2/418 (0%)
Query: 47 KVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIES 106
K + +L GI +S +IV DVL + +G FF WA ++ V +Y ++ +
Sbjct: 101 KSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 107 LAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQN 165
L + + + M D++ M + + ++E I M + RV V A+ F + +GV +
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCS 220
Query: 166 LAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFRE 225
+FN LL LC+ +V A+ +F+ K DS +Y+I++ GW K + ++ +E
Sbjct: 221 TESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 226 MVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENR 285
MV++G PD ++Y +++ L + GR+++++ I ++ P + +Y+ ++ +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 286 IEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNI 345
++++ + M ++ Y+ L+ K K + + ++M S+GV P +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 346 ILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKR 404
L L G A ++++ K C Y +++K + G+ VW M+
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 405 FIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDV 462
+ + + +++GLC G + ++ +++E+ + KG P+ + +L L+ + ++
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTEL 518
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 152/327 (46%), Gaps = 7/327 (2%)
Query: 149 EAVYTFN--VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSI 205
EA+ TF +++ GVT+++ +++ +L AL + K ++ M + PD + +I
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI 191
Query: 206 LLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTV 265
++ + + + RA E+F E G ++ ++ LC+ V A + + +
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNI 251
Query: 266 CRP-TSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNV 324
P S Y++++ + +E+ EM ++G D Y+ LI + + +
Sbjct: 252 --PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 325 YRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKM 383
+ ++ KG P++ N ++ I + DE+ R +RRM+ + CE + +TY+ ++
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 384 FCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPS 443
+G ++ A ++++ M + +P+ + + LC G + V+ + + G R S
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 444 GETFGKLRKLLIKEGREDVLKFLQEKM 470
+ L K L + G+ +L + ++M
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 126/282 (44%), Gaps = 2/282 (0%)
Query: 89 KQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKV 147
K+ N +Y+ MI +K+ + + M ++ M + + ++ ++ R ++
Sbjct: 247 KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRI 306
Query: 148 EEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSIL 206
++V F+ ++ G + +N ++ +++ ++ + M D P+ +TYS L
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 207 LEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVC 266
+ G K + A EIF EM+ G P + LC G A+ I + C
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 426
Query: 267 RPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYR 326
R + Y +L+ + ++ + EM+++G +DV +Y ++ C +N
Sbjct: 427 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 327 VLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK 368
V+++ KG PN + + + L+ +T+ AY++F ++ K
Sbjct: 487 VMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 181/360 (50%), Gaps = 3/360 (0%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVE 148
Q+ + ++ Y ++ L K + ++L+N M ++ NV + ++ + + +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
+A+ F M+ GV N+ ++ L+S LC + A + M +R I P+ T++ L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR 267
+ + K+ L A +++ EM+ +PDI TY +++ C R+DEA + + M S C
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 268 PTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
P Y+ L++ + RI++ V+ F EM + G++ + Y LI F +A N V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQ 386
K M S GV PN T N +L+GL G+ ++A VF + + E TY +MI+ C+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
G++E + ++ + LK P + ++ +I+G C KG+ ++ L M E G P T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 183/358 (51%), Gaps = 3/358 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAVYTF 154
S+ ++ ++ ++AK++++ ++ L M R N+ T+ I++ + R ++ A+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ + LL+ C K + A + D M + + PD+ T++ L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC P++VTYG++V+ LCK G +D A ++ M++ IY
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
S ++ + +DA++ F EME G+ +V Y++LI C ++ + R+L DM
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
+ + PN T N +++ + G+ EA +++ MIK + D TY+ +I FC L++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
A +++ M K P++ T++ LING C + + L +M ++G+ + T+ L
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 192 MKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
+K R +P ++ LL K + +M G + ++ TY I+++ C+ ++
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
AL ++ M P+ S L++ Y RI DAV +M + G D + L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLC 370
I NK ++ M +G PN T +++NGL RG+ D A+ + +M
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
EA+ Y+ +I C+ + A ++ M+ K P++ T+S LI+ LC+ SD+
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
LL DMIE+ I P+ TF L +KEG+
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGK 345
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Query: 285 RIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCN 344
+++DA+ F M K+ L + +N L+ A K KF V + + M G++ N T N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 345 IILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLK 403
I++N R + A + +M+KL E T + ++ +C G + A + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 404 RFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVL 463
+ P TF+ LI+GL S++ L++ M+++G +P+ T+G + L K G D+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 464 KFLQEKM 470
L KM
Sbjct: 245 FNLLNKM 251
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 193/404 (47%), Gaps = 25/404 (6%)
Query: 62 SPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVN 121
+PE ++L K +N L F WA Q + ++R + L K + Y+ L
Sbjct: 47 TPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTAQILAE 104
Query: 122 AMRTKRM--------------------LNVETFCIIMRKYARVQKVEEAVYTFNVMQKYG 161
+ K + F ++++ Y+R+ +++A+ ++ Q +G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 162 VTQNLAAFNGLLSALCKSK-NVRKAQEIF-DCMKDRFIPDSKTYSILLEGWGKDPNLPRA 219
+ ++N +L A +SK N+ A+ +F + ++ + P+ TY+IL+ G+ N+ A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 220 REIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHT 279
+F +M GC P++VTY ++D CK ++D+ +++SM P Y+V+++
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 280 YGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPN 339
E R+++ EM + G D YN LI +CK F + +M G+ P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 340 SRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWK 398
T +++ + G + A +M ++ + TYT ++ F Q G + +A++V +
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 399 YMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRP 442
M F PS+ T++ LING C G + D+ +LEDM EKG+ P
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 3/367 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTF 154
+V Y+ +I + L + M TK L NV T+ ++ Y +++K+++
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M G+ NL ++N +++ LC+ +++ + M R + D TY+ L++G+ K+
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
N +A + EM+ G P ++TY ++ +CKAG ++ A+ + M P Y
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ LV + + + +A EM NG V YNALI C K ++ VL+DM
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEK 392
KG++P+ + + +L+G + DEA RV R M+ K + D TY+ +I+ FC+ ++
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A +++ M P T++ LIN C +G + + L +M+EKG+ P T+ L
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 453 LLIKEGR 459
L K+ R
Sbjct: 564 GLNKQSR 570
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 30/392 (7%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTF 154
SV Y S+I S+ K + ++ MR + + N T+ ++ +++ + EA
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKD 213
M G + ++ +N L++ C + + A + + MK++ + PD +YS +L G+ +
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
++ A + REMV+ G PD +TY ++ C+ R EA + + M P F Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ L++ Y +E +E A+ EM + G+L DV Y+ LI K ++ + R+L +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 334 KGVAPNSRT--------CNI-------ILNGLIGRGETDEAYRVFRRMI-KLCEADADTY 377
+ P+ T NI ++ G +G EA +VF M+ K + D Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 378 TMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSV--LINGLCDKGIVSDSCVLLEDM 435
+MI C+ G++ KA+ ++K M F+ +HT +V L+ L +G V++ L +
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFL--LHTVTVIALVKALHKEGKVNE----LNSV 697
Query: 436 IEKGIRPSGETFGKLRKLLI----KEGREDVL 463
I +R + + K+L+ +EG DV+
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVV 729
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 6/274 (2%)
Query: 201 KTYSILLEG-WGKDPNLPRAREIFREMVDTG--CNPDIVTYGIMVDVLCKAGRVDEALGI 257
KT IL E K + A +F+ + +T C + ++V + +D+AL I
Sbjct: 97 KTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSI 156
Query: 258 VKSMDSTVCRPTSFIY-SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFC 316
V + P Y +VL T + I A + F EM ++ + +V YN LI FC
Sbjct: 157 VHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC 216
Query: 317 KANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADAD 375
A + M +KG PN T N +++G + D+ +++ R M +K E +
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 376 TYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDM 435
+Y ++I C+ G +++ V M + + T++ LI G C +G + V+ +M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 436 IEKGIRPSGETFGKLRKLLIKEGRED-VLKFLQE 468
+ G+ PS T+ L + K G + ++FL +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 37/232 (15%)
Query: 243 DVLCKAGRVDEALGIVKSMDST--VCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 300
DV K + A + KS+ T +C TS ++ ++V +Y + I+ A+ + +G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 301 ILADVAMYNALIGAFCKANK-FKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEA 359
+ V YNA++ A ++ + V K+M V+PN
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPN-------------------- 204
Query: 360 YRVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGL 419
VF TY ++I+ FC G ++ A ++ M+ K +P++ T++ LI+G
Sbjct: 205 --VF------------TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 420 CDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMN 471
C + D LL M KG+ P+ ++ + L +EGR + F+ +MN
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 181/363 (49%), Gaps = 3/363 (0%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y +++ L K + L+ M ++ +V + I+ + V +A+ F M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKDPNL 216
G+ N+ +N L+ LC A + M +R I P+ T+S L++ + K+ L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A +++ EM+ +PDI TY +++ C R+DEA + + M S C P Y+ L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
+ + R+E+ ++ F EM + G++ + YN LI +A ++ K M S GV
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFK 395
P+ T +I+L+GL G+ ++A VF + K E D TY +MI+ C+ G++E +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLI 455
++ + LK P++ ++ +I+G C KG+ ++ L +M E G P+ T+ L + +
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 456 KEG 458
++G
Sbjct: 582 RDG 584
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 192/378 (50%), Gaps = 3/378 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ ++ ++ ++AK+ ++ ++ L M+ R+ ++ ++ I++ + R ++ A+
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFIPDSKTYSILLEGWGKD 213
M K G ++ + LL+ C K + +A + D M + P++ T++ L+ G
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC PD+ TYG +V+ LCK G +D AL ++K M+ IY
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ + DA++ F EM+ GI +V YN+LI C ++ + R+L DM
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
+ + PN T + +++ + G+ EA +++ MIK + D TY+ +I FC L++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A +++ M K P++ T++ LI G C V + L +M ++G+ + T+ L +
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 453 LLIKEGREDVLKFLQEKM 470
L + G D+ + + +KM
Sbjct: 439 GLFQAGDCDMAQKIFKKM 456
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 176/359 (49%), Gaps = 25/359 (6%)
Query: 50 LDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFC-FFKWAEK--------QQNYEHSVRAY 100
L T +D GIR P +V N+ C + +W++ ++ +V +
Sbjct: 277 LFTEMDNKGIR--PNVVT------YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 101 HSMIESLAKIRQYQIMWDLVNAMRTKRMLNVE--TFCIIMRKYARVQKVEEAVYTFNVMQ 158
++I++ K + L + M KR ++ + T+ ++ + +++EA + F +M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 159 KYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPNLP 217
N+ +N L+ CK+K V + E+F M R + ++ TY+ L++G + +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 218 RAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLV 277
A++IF++MV G PDI+TY I++D LCK G++++AL + + + + P + Y++++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 278 HTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVA 337
++ED D F + G+ +V +Y +I FC+ + + ++M G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 338 PNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCE--ADADTYTMMIKMFCQGGELEKAF 394
PNS T N ++ + G+ + + + M + C DA T +M+I M G LEK++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEM-RSCGFVGDASTISMVINML-HDGRLEKSY 624
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 12/285 (4%)
Query: 182 VRKAQEIFDCMKDRFIPDSKTY------SILLEGWGKDPNLPRAREIFREMVDTGCNPDI 235
+RKA +F F S Y ++LL D L A ++F EMV + P I
Sbjct: 26 LRKASPLFSLRGVYFSAASYDYREKLSRNVLL-----DLKLDDAVDLFGEMVQSRPLPSI 80
Query: 236 VTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLE 295
V + ++ + K + D + + + M + + Y++L++ + +++ A+ +
Sbjct: 81 VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 296 MEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGE 355
M K G D+ ++L+ +C + ++ M PN+ T N +++GL +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 356 TDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSV 414
EA + RM+ + C+ D TY ++ C+ G+++ A + K M+ + + ++
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 415 LINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
+I+ LC+ V+D+ L +M KGIRP+ T+ L + L GR
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 188/374 (50%), Gaps = 4/374 (1%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y ++ L K + ++L+N M ++ V + I+ + + +++A+ F M
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKDPNL 216
+ G+ N+ ++ L+S LC A + M +R I PD T+S L++ + K+ L
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 217 PRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVL 276
A +++ EMV +P IVTY +++ C R+DEA + + M S C P Y+ L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 277 VHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGV 336
+ + R+E+ ++ F EM + G++ + YN LI +A + K+M S GV
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 337 APNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFK 395
PN T N +L+GL G+ ++A VF + + E TY +MI+ C+ G++E +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 396 VWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLI 455
++ + LK P + ++ +I+G C KG ++ L ++M E G P+ + L + +
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 456 KEG-REDVLKFLQE 468
++G RE + ++E
Sbjct: 583 RDGDREASAELIKE 596
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 191/378 (50%), Gaps = 3/378 (0%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ + ++ ++AK+ ++ ++ L M+ + N T+ I++ + R ++ A+
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFIPDSKTYSILLEGWGKD 213
M K G N+ + LL+ C SK + +A + D M + P++ T++ L+ G
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC PD+VTYG++V+ LCK G D A ++ M+ P IY
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ ++DA++ F EME GI +V Y++LI C ++ + R+L DM
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQGGELEK 392
+ + P+ T + +++ + G+ EA +++ M+K + TY+ +I FC L++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A +++++M K P + T++ LI G C V + + +M ++G+ + T+ L +
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 453 LLIKEGREDVLKFLQEKM 470
L + G D+ + + ++M
Sbjct: 440 GLFQAGDCDMAQEIFKEM 457
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 176/353 (49%), Gaps = 3/353 (0%)
Query: 93 YEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR-MLNVETFCIIMRKYARVQKVEEAV 151
Y+ + ++++I L + L++ M K ++ T+ +++ + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 152 YTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGW 210
N M++ + + +N ++ LCK K++ A +F M+ + I P+ TYS L+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 211 GKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTS 270
A + +M++ NPD+ T+ ++D K G++ EA + M P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 271 FIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKD 330
YS L++ + + +R+++A F M DV YN LI FCK + + V ++
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 331 MNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LCEADADTYTMMIKMFCQGGE 389
M+ +G+ N+ T NI++ GL G+ D A +F+ M+ + TY ++ C+ G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 390 LEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRP 442
LEKA V++Y++ + P+++T++++I G+C G V D L ++ KG++P
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 136/268 (50%), Gaps = 5/268 (1%)
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
++ T+ ++ + +++EA F M ++ +N L+ CK K V + E+F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 190 DCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
M R + ++ TY+IL++G + + A+EIF+EMV G P+I+TY ++D LCK
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
G++++A+ + + + + PT + Y++++ ++ED D F + G+ DV Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK 368
N +I FC+ + + K+M G PNS N ++ + G+ + + + + M +
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM-R 598
Query: 369 LC--EADADTYTMMIKMFCQGGELEKAF 394
C DA T ++ M G L+K+F
Sbjct: 599 SCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 192 MKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
+K R P +S LL K + +M + G + TY I+++ C+ ++
Sbjct: 73 VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQL 132
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
AL ++ M P S L++ Y RI +AV +M G + +N L
Sbjct: 133 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 192
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK-LC 370
I NK ++ M +KG P+ T +++NGL RG+TD A+ + +M +
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL 252
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
E Y +I C+ ++ A ++K M+ K P++ T+S LI+ LC+ G SD+
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
LL DMIE+ I P TF L +KEG+
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGK 341
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 216 LPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSV 275
L A +F EMV + P I+ + ++ + K + D + + + M + + YS+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 276 LVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKG 335
L++ + +++ A+ +M K G ++ ++L+ +C + + ++ M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 336 VAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEKAF 394
PN+ T N +++GL + EA + RM+ K C+ D TY +++ C+ G+ + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 395 KVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLL 454
+ M+ + P + ++ +I+GLC + D+ L ++M KGIRP+ T+ L L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 455 IKEGR 459
GR
Sbjct: 302 CNYGR 306
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 269 TSFIYSVLVHTYGV-ENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRV 327
TS+ Y + G+ E +++DAV F EM K+ + ++ L+ A K NKF V +
Sbjct: 44 TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 103
Query: 328 LKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC-EADADTYTMMIKMFCQ 386
+ M + G+ N T +I++N R + A V +M+KL E + T + ++ +C
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 387 GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGET 446
+ +A + M + + P+ TF+ LI+GL S++ L++ M+ KG +P T
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 447 FGKLRKLLIKEGREDVLKFLQEKMNLLVKEP 477
+G + L K G D+ L KM EP
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMR 139
A F++ ++ + E ++ Y+ MIE + K + + WDL FC +
Sbjct: 485 AMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDL--------------FCNLSL 529
Query: 140 KYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMK-DRFIP 198
K GV ++ A+N ++S C+ + +A +F MK D +P
Sbjct: 530 K--------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 199 DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
+S Y+ L+ +D + + E+ +EM G D T G++ ++L GR+D++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 199/396 (50%), Gaps = 40/396 (10%)
Query: 103 MIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGV 162
MI L + R + + +R K NV TF +++ + K+ +A M+ YG
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 163 TQNLAAFNGLLSALCK---SKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKDPNLPR 218
+ N+ ++N L+ CK + + KA + M + + P+ T++IL++G+ KD NLP
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 219 AREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVH 278
+ ++F+EM+D P++++Y +++ LC G++ EA+ + M S +P Y+ L++
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 279 TYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAP 338
+ + +++A+D F ++ G + MYN LI A+CK K + + + ++M +G+ P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 339 NSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWK 398
+ T N ++ GL G + A ++F ++ D T+ ++++ +C+ GE KA + K
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 399 YM------------------------------------KLKRFIPSMHTFSVLINGLCDK 422
M K +R ++ +++VL+ G K
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 423 GIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEG 458
G + D+ +LL +M+EKG+ P+ T+ +++ ++ +G
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 260 SMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKAN 319
SM VC S I +LV Y +R E + F G L+ A K N
Sbjct: 144 SMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKEN 202
Query: 320 KFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYT 378
+ +V V K+M + + PN T N+++N L G+ ++A V M + C + +Y
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 379 MMIKMFCQ---GGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDM 435
+I +C+ G++ KA V K M P++ TF++LI+G + S + ++M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 436 IEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
+++ ++P+ ++ L L G+ +++KM
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 97 VRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNV 156
V Y+ +I L + + L + + +K + ++ TF I+M Y R + +A
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 157 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKD--RFIPDSKTYSILLEGWGKDP 214
M K G+ +N ++ CK N++ A + M+ R + +Y++LL+G+ +
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 215 NLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALG 256
L A + EM++ G P+ +TY I+ + + G V + G
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 181/364 (49%), Gaps = 4/364 (1%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKVEEAVYTF 154
++ Y +I+SL +++ +L+ M K ++ NV T+ ++ Y + +E+AV
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
+M+ ++ N +N L+ CKS NV KA + + M +R +PD TY+ L++G +
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
N A + M D G PD TY M+D LCK+ RV+EA + S++ P +Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ L+ Y ++++A +M L + +NALI C K K + + M
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEK 392
G+ P T I+++ L+ G+ D AY F++M+ + DA TYT I+ +C+ G L
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A + M+ P + T+S LI G D G + + +L+ M + G PS TF L K
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 453 LLIK 456
L++
Sbjct: 716 HLLE 719
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 169/340 (49%), Gaps = 3/340 (0%)
Query: 133 TFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM 192
T+ ++ Y + + ++ A FN M G +N A+ L+ LC ++ + +A ++F M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 193 KD-RFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRV 251
KD P +TY++L++ A + +EM +TG P+I TY +++D LC +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 252 DEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNAL 311
++A ++ M P Y+ L++ Y IEDAVD ME + + YN L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 312 IGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLC 370
I +CK+N K + VL M + V P+ T N +++G G D AYR+ M +
Sbjct: 435 IKGYCKSNVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 371 EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCV 430
D TYT MI C+ +E+A ++ ++ K P++ ++ LI+G C G V ++ +
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 431 LLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
+LE M+ K P+ TF L L +G+ L+EKM
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 216/510 (42%), Gaps = 64/510 (12%)
Query: 23 NSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFRNAGTLAFC 82
N E ++++ + I LS P +L +SP V + + T A
Sbjct: 51 NLPEEESDSMSVPHRLLSI-LSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKT-ALN 108
Query: 83 FFKWAEKQQNYEHSVRAYHSMIESLA---------KIRQYQI-----------MWDLVNA 122
F W + Y+HSV +Y S++ L KIR I + DL
Sbjct: 109 FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRK 168
Query: 123 MRT------KRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSAL 176
M K L + + ++ AR V+E + M + V N+ +N +++
Sbjct: 169 MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 177 CKSKNVRKA-QEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDI 235
CK NV +A Q + ++ PD TY+ L+ G+ + +L A ++F EM GC +
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288
Query: 236 VTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLE 295
V Y ++ LC A R+DEA+ + M C PT Y+VL+ + R +A++ E
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 296 MEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGE 355
ME+ GI ++ Y LI + C KF+ +L M KG+ PN T N ++NG RG
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 356 TDEAY---------------RVFRRMIK-LCEA-------------------DADTYTMM 380
++A R + +IK C++ D TY +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 381 IKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGI 440
I C+ G + A+++ M + +P T++ +I+ LC V ++C L + + +KG+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 441 RPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
P+ + L K G+ D + EKM
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 22/387 (5%)
Query: 97 VRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVE-TFCIIMRKYARVQKVEEAVYTFN 155
V Y+S+I+ + + + L++ M + ++ + T+ ++ + ++VEEA F+
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 156 VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDP 214
+++ GV N+ + L+ CK+ V +A + + M + +P+S T++ L+ G D
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 215 NLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYS 274
L A + +MV G P + T I++ L K G D A + M S+ +P + Y+
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 275 VLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSK 334
+ TY E R+ DA D +M +NG+ D+ Y++LI + + + VLK M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 335 GVAPNSRTCNIILNGLI------GRG------------ETDEAYRVFRRMIKLC-EADAD 375
G P+ T ++ L+ +G E D + +M++ +A
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 376 TYTMMIKMFCQGGELEKAFKVWKYMKLKRFI-PSMHTFSVLINGLCDKGIVSDSCVLLED 434
+Y +I C+ G L A KV+ +M+ I PS F+ L++ C +++ +++D
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 435 MIEKGIRPSGETFGKLRKLLIKEGRED 461
MI G P E+ L L K+G ++
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKE 848
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 163/416 (39%), Gaps = 94/416 (22%)
Query: 99 AYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFNVM 157
Y SMI+SL K ++ + DL +++ K + NV + ++ Y + KV+EA M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEI----------------------------F 189
N FN L+ LC +++A + F
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 190 DCMKDRFI--------PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIM 241
D RF PD+ TY+ ++ + ++ L A ++ +M + G +PD+ TY +
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 242 VDVLCKAGRVDEALGIVKSMDSTVCRPT-----SFIYSVLVHTYG--------------- 281
+ G+ + A ++K M T C P+ S I +L YG
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 282 ---------VENRIEDAVD------------------------TFLEMEKN-GILADVAM 307
+E +E +V F M++N GI +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 308 YNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI 367
+NAL+ CK K +V+ DM G P +C +++ GL +GE + VF+ ++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 368 KLCE--ADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCD 421
+ C D + ++I + G +E ++++ M+ S T+S+LI G D
Sbjct: 859 Q-CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEGPPD 913
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 184/355 (51%), Gaps = 3/355 (0%)
Query: 117 WDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSAL 176
W N ++K +L+V +F I+++ ++E++ + ++G + N+ + L+
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 177 CKSKNVRKAQEIFDCM-KDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDI 235
CK + KA+++F M K + + +TY++L+ G K+ + E++ +M + G P++
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 236 VTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLE 295
TY +++ LCK GR +A + M Y+ L+ E ++ +A +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 296 MEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGE 355
M+ +GI ++ YN LI FC K + +D+ S+G++P+ T NI+++G +G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 356 TDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSV 414
T A ++ + M + + TYT++I F + +EKA ++ M+ +P +HT+SV
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 415 LINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGRE-DVLKFLQE 468
LI+G C KG ++++ L + M+EK P+ + + KEG LK L+E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 180/354 (50%), Gaps = 3/354 (0%)
Query: 93 YEHSVRAYHSMIESLAKIRQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAV 151
+ +V Y ++I+ K + + DL M + + N T+ +++ + ++
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 152 YTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIP-DSKTYSILLEGW 210
+ MQ+ GV NL +N +++ LCK + A ++FD M++R + + TY+ L+ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 211 GKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTS 270
++ L A ++ +M G NP+++TY ++D C G++ +AL + + + S P+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 271 FIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKD 330
Y++LV + + A EME+ GI Y LI F +++ + ++
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 331 MNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI-KLCEADADTYTMMIKMFCQGGE 389
M G+ P+ T +++++G +G+ +EA R+F+ M+ K CE + Y MI +C+ G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 390 LEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPS 443
+A K+ K M+ K P++ ++ +I LC + ++ L+E MI+ GI PS
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 161/313 (51%), Gaps = 1/313 (0%)
Query: 136 IIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR 195
+I+ Y + Q + ++ FN M G FN LL+ + S + + F+ K +
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 196 FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEAL 255
+ D ++ IL++G + + ++ ++ E+ + G +P++V Y ++D CK G +++A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 256 GIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAF 315
+ M Y+VL++ + + + +M+++G+ ++ YN ++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 316 CKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADA 374
CK + K+ ++V +M +GV+ N T N ++ GL + +EA +V +M +
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 375 DTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLED 434
TY +I FC G+L KA + + +K + PS+ T+++L++G C KG S + ++++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 435 MIEKGIRPSGETF 447
M E+GI+PS T+
Sbjct: 399 MEERGIKPSKVTY 411
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 272 IYSVLVHTYGVENRIEDAVDTFLEMEKNG------------------------------- 300
+Y V++++Y + ++ F EM NG
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 301 ---ILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETD 357
++ DV + LI C+A + + + +L ++ G +PN +++G +GE +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 358 EAYRVFRRMIKL-CEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLI 416
+A +F M KL A+ TYT++I + G ++ F++++ M+ P+++T++ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 417 NGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKE 457
N LC G D+ + ++M E+G+ + T+ L L +E
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%)
Query: 307 MYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM 366
+Y +I ++ ++ +M G P S N +L ++G ++ + F
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 367 IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVS 426
D ++ ++IK C+ GE+EK+F + + F P++ ++ LI+G C KG +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 427 DSCVLLEDMIEKGIRPSGETFGKLRKLLIKEG 458
+ L +M + G+ + T+ L L K G
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 169/340 (49%), Gaps = 4/340 (1%)
Query: 51 DTALDQSGIRVSPEIVEDVLEKFRNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKI 110
+ AL G+R+ VL++ + G A FF W ++Q ++H Y +M+ +L +
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 111 RQYQIMWDLVNAM-RTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAF 169
+Q+ + L++ M R N T+ ++ Y R + EA+ FN MQ+ G + +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 170 NGLLSALCKSKNVRKAQEIFDCMK-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVD 228
L+ K+ + A +++ M+ PD+ TYS+++ GK +LP A ++F EMVD
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 229 TGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIED 288
GC P++VTY IM+D+ KA AL + + M + P YS+++ G +E+
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 289 AVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILN 348
A F EM++ + D +Y L+ + KA + ++ + M G+ PN TCN +L+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 349 GLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQG 387
+ + EAY + + M+ L TYT+++ G
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 36/320 (11%)
Query: 161 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-KDRFIPDSKTYSILLEGWGKDPNLPRA 219
G + + ++ L ++K ++ D M +D P++ TY+ L+ +G+ L A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 220 REIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHT 279
+F +M + GC PD VTY ++D+ KAG +D A+ + + M + P +F YSV+++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 280 YGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPN 339
G + A F EM G ++ YN ++ KA ++N ++ +DM + G P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP- 537
Query: 340 SRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWKY 399
D TY++++++ G LE+A V+
Sbjct: 538 ---------------------------------DKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 400 MKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
M+ K +IP + +L++ G V + + M+ G+RP+ T L ++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 460 -EDVLKFLQEKMNLLVKEPL 478
+ + LQ + L ++ L
Sbjct: 625 IAEAYELLQNMLALGLRPSL 644
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 185/382 (48%), Gaps = 8/382 (2%)
Query: 96 SVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTF 154
S+ + ++ ++AK+ ++ ++ L M+ + N+ T+ I + + R ++ A+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 155 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKD 213
M K G ++ N LL+ C + +A + D M + + PD+ T++ L+ G +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 214 PNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIY 273
A + MV GC PD+VTYG +++ LCK G D AL ++ M+ IY
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 274 SVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNS 333
+ ++ ++DA D F +ME GI DV YN LI C ++ + R+L DM
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 334 KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK--LCEADADTYTMMIKMFCQGGELE 391
K + P+ N +++ + G+ EA +++ M+K C D Y +IK FC+ +E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 392 KAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLR 451
+ +V++ M + + + T++ LI+G ++ ++ + M+ G+ P T+ L
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 452 KLLIKEGRED----VLKFLQEK 469
L G + V +++Q++
Sbjct: 434 DGLCNNGNVETALVVFEYMQKR 455
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 185/375 (49%), Gaps = 4/375 (1%)
Query: 90 QQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR-MLNVETFCIIMRKYARVQKVE 148
+ Y+ + +++ L + + LV M K ++ T+ ++ + + +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 149 EAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILL 207
A+ N M+K + ++ +N ++ LCK K++ A ++F+ M+ + I PD TY+ L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 208 EGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSM-DSTVC 266
A + +M++ NPD+V + ++D K G++ EA + M S C
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 267 RPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYR 326
P Y+ L+ + R+E+ ++ F EM + G++ + Y LI F +A N
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 327 VLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFC 385
V K M S GV P+ T NI+L+GL G + A VF M K + D TYT MI+ C
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 386 QGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGE 445
+ G++E + ++ + LK P++ T++ +++G C KG+ ++ L +M E G P+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 446 TFGKLRKLLIKEGRE 460
T+ L + +++G E
Sbjct: 533 TYNTLIRARLRDGDE 547
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 190 DCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAG 249
D +K R P +S LL K + +M + G + ++ TY I ++ C+
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 250 RVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYN 309
++ AL I+ M P+ + L++ + NRI +AV +M + G D +
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 310 ALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK- 368
L+ + NK +++ M KG P+ T ++NGL RGE D A + +M K
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 369 LCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDS 428
EAD Y +I C+ ++ AF ++ M+ K P + T++ LI+ LC+ G SD+
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 429 CVLLEDMIEKGIRPSGETFGKLRKLLIKEGR 459
LL DM+EK I P F L +KEG+
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 157/361 (43%), Gaps = 43/361 (11%)
Query: 74 RNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTK------- 126
R LA EK + E V Y+++I+ L K + +DL N M TK
Sbjct: 228 RGEPDLALNLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 127 -------------------RML----------NVETFCIIMRKYARVQKVEEAVYTFNVM 157
R+L ++ F ++ + + K+ EA ++ M
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 158 QKY-GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR-FIPDSKTYSILLEGWGKDPN 215
K ++ A+N L+ CK K V + E+F M R + ++ TY+ L+ G+ + +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 216 LPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSV 275
A+ +F++MV G +PDI+TY I++D LC G V+ AL + + M + Y+
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 276 LVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKG 335
++ ++ED D F + G+ +V Y ++ FC+ + + +M G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 336 VAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLC--EADADTYTMMIKMFCQGGELEKA 393
PNS T N ++ + G+ + + + M + C DA T+ ++ M G L+K+
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEM-RSCGFAGDASTFGLVTNML-HDGRLDKS 584
Query: 394 F 394
F
Sbjct: 585 F 585
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 41/200 (20%)
Query: 61 VSPEIV--EDVLEKFRNAGTL--AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIM 116
V P+I+ +L+ N G + A F++ +K+ + + + Y +MIE+L K + +
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 117 WDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSAL 176
WDL FC + K GV N+ + ++S
Sbjct: 481 WDL--------------FCSLSLK--------------------GVKPNVVTYTTMMSGF 506
Query: 177 CKSKNVRKAQEIFDCMK-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDI 235
C+ +A +F MK D +P+S TY+ L+ +D + + E+ +EM G D
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 236 VTYGIMVDVLCKAGRVDEAL 255
T+G++ ++L GR+D++
Sbjct: 567 STFGLVTNML-HDGRLDKSF 585
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 188/385 (48%), Gaps = 21/385 (5%)
Query: 83 FFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKR----MLNVETFCIIM 138
FF W + + H +++ M+E L + R + + + ++ + L F ++
Sbjct: 87 FFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLI 145
Query: 139 RKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRF-- 196
R Y +E+V F M++ G++ ++ FN LLS L K A ++FD M+ +
Sbjct: 146 RSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGV 205
Query: 197 IPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALG 256
PDS T++ L+ G+ K+ + A IF++M CNPD+VTY ++D LC+AG+V A
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 257 IVKSM--DSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGA 314
++ M +T P Y+ LV Y ++ I++AV F +M G+ + YN LI
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 315 FCKANKFKNVYRVLKDMNS--KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CE 371
+A+++ + +L N AP++ T NI++ G D A +VF+ M+ +
Sbjct: 326 LSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 372 ADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFI-------PSMHTFSVLINGLCDKGI 424
D+ +Y+++I+ C E ++A ++ + K + P ++ + LC G
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGK 445
Query: 425 VSDSCVLLEDMIEKGIR--PSGETF 447
+ + ++++G++ PS +T
Sbjct: 446 TKQAEKVFRQLMKRGVQDPPSYKTL 470
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 170/373 (45%), Gaps = 14/373 (3%)
Query: 89 KQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVE--TFCIIMRKYARVQK 146
KQ SV ++S++ L K + + DL + MR + + TF ++ + +
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSM 224
Query: 147 VEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI---PDSKTY 203
V+EA F M+ Y ++ +N ++ LC++ V+ A + M + P+ +Y
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 204 SILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDS 263
+ L+ G+ + A +F +M+ G P+ VTY ++ L +A R DE I+ +
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 264 --TVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKF 321
T P + +++L+ + ++ A+ F EM + D A Y+ LI C N+F
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404
Query: 322 KNVYRVLKDMNSKGV-------APNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADA 374
+ ++ K V P + N + L G+T +A +VFR+++K D
Sbjct: 405 DRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP 464
Query: 375 DTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLED 434
+Y +I C+ G+ + A+++ M + F+P + T+ +LI+GL G + L+
Sbjct: 465 PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524
Query: 435 MIEKGIRPSGETF 447
M+ P TF
Sbjct: 525 MLRSSYLPVATTF 537
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 187/464 (40%), Gaps = 82/464 (17%)
Query: 97 VRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM---LNVETFCIIMRKYARVQKVEEAVYT 153
V Y+++I+ L + + +I ++++ M K NV ++ ++R Y Q+++EAV
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 154 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI---PDSKTYSILLEGW 210
F+ M G+ N +N L+ L ++ + ++I D F PD+ T++IL++
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 211 GKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSM-------DS 263
+L A ++F+EM++ +PD +Y +++ LC D A + +
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 264 TVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKN 323
C+P + Y+ + + + A F ++ K G+ D Y LI C+ KFK
Sbjct: 424 DECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKP 482
Query: 324 VYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMI---------------- 367
Y +L M + P+ T ++++GL+ GE A+ +RM+
Sbjct: 483 AYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLA 542
Query: 368 --------------------KLCEADADTYTMMIKMFCQGGELEKAFKVWK--------- 398
K + D T ++++ + EKAF + +
Sbjct: 543 ELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLV 602
Query: 399 -------YMKLKRFIPSMHTF----------------SVLINGLCDKGIVSDSCVLLEDM 435
Y+ R + HT + +I GLC S++ L ++
Sbjct: 603 KMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNEL 662
Query: 436 IEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEPLC 479
+E G LR L G+ + L+F+ ++M L + C
Sbjct: 663 VELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESDDC 706
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 121/235 (51%), Gaps = 7/235 (2%)
Query: 237 TYGIMVDVLCKAGRVDEALGIVKSMD--STVC-RPTSFIYSVLVHTYGVENRIEDAVDTF 293
++ +M++ L +A ++ A + S++ S C + ++ L+ +YG +++V F
Sbjct: 102 SFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLF 161
Query: 294 LEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMN-SKGVAPNSRTCNIILNGLIG 352
M++ GI V +N+L+ K + + + +M + GV P+S T N ++NG
Sbjct: 162 QTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCK 221
Query: 353 RGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKVWKYM--KLKRFIPSM 409
DEA+R+F+ M + C D TY +I C+ G+++ A V M K P++
Sbjct: 222 NSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNV 281
Query: 410 HTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLK 464
+++ L+ G C K + ++ ++ DM+ +G++P+ T+ L K L + R D +K
Sbjct: 282 VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK 336
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 412 FSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKM 470
F+ LI + G+ +S L + M + GI PS TF L +L+K GR + L ++M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 182/369 (49%), Gaps = 9/369 (2%)
Query: 97 VRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIMRKYARVQKVEEAVYTFN 155
V Y +++ + K+ + +L++ M + +V + I+ + + +A Y F+
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 156 VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSILLEGWGKDP 214
M + G+ N+ +N ++ C AQ + M +R I PD T++ L+ K+
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 215 NLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYS 274
L A ++ EM+ PD VTY M+ CK R D+A K M + P ++
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Query: 275 VLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSK 334
++ Y R+++ + E+ + G++A+ YN LI FC+ + + ++M S
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 335 GVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKLCEADADT--YTMMIKMFCQGGELEK 392
GV P++ TCNI+L G + +EA +F +I++ + D DT Y ++I C+G ++++
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 393 AFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452
A+ ++ + + P + T++V+I+G C K +SD+ VL M + G P T+ L +
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 453 LLIKEGRED 461
+K G D
Sbjct: 616 GCLKAGEID 624
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 178/389 (45%), Gaps = 23/389 (5%)
Query: 80 AFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRM-LNVETFCIIM 138
A FF + + + + +V + +I ++ + + L M +R+ LN+ +F I++
Sbjct: 90 AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 139 RKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDR--- 195
+ + K+ ++ TF + K G ++ FN LL LC + +A +F M +
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 196 -------------FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMV 242
P T++ L+ G + + A + +MV G + D+VTYG +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 243 DVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIL 302
+ +CK G AL ++ M+ T +P IYS ++ + DA F EM + GI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 303 ADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRV 362
+V YN +I FC ++ + R+L+DM + + P+ T N +++ + G+ EA ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 363 FRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCD 421
M+ C D TY MI FC+ + A ++ M P + TF+ +I+ C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444
Query: 422 KGIVSDSCVLLEDMIEKGIRPSGETFGKL 450
V + LL ++ +G+ + T+ L
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTL 473
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 10/377 (2%)
Query: 89 KQQNYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML-NVETFCIIMRKYARVQKV 147
++ + + V Y ++I+ L K + L + M K + NV T+ ++ + +
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 148 EEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFI-PDSKTYSIL 206
+A M + + ++ FN L+SA K + +A+++ D M R I PD+ TY+ +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 207 LEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVC 266
+ G+ K A+ +F M +PD+VT+ ++DV C+A RVDE + +++ +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 267 RPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYR 326
+ Y+ L+H + + + A D F EM +G+ D N L+ FC+ K +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 327 VLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFC 385
+ + + + ++ NII++G+ + DEA+ +F + I E D TY +MI FC
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 386 QGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSCVLLEDMIEKGIRPSGE 445
+ A ++ MK P T++ LI G G + S L+ +M G SG+
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF--SGD 641
Query: 446 TFG-KLRKLLIKEGRED 461
F K+ LI +GR D
Sbjct: 642 AFTIKMVADLITDGRLD 658
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 159/327 (48%), Gaps = 17/327 (5%)
Query: 80 AFCFF-KWAEKQQ--------NYEHSVRAYHSMIESLAKIRQYQIMWDLVNAMRTKRML- 129
FC F +W++ Q+ V ++++I + K + L + M + +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 130 NVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF 189
+ T+ ++ + + + ++A + F++M + ++ FN ++ C++K V + ++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 190 DCMKDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKA 248
+ R + ++ TY+ L+ G+ + NL A+++F+EM+ G PD +T I++ C+
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 249 GRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMY 308
+++EAL + + + + + Y++++H +++++A D F + +G+ DV Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 309 NALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIK 368
N +I FC + + + M G P++ T N ++ G + GE D++ + M +
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM-R 634
Query: 369 LCEADADTYTM-MIKMFCQGGELEKAF 394
D +T+ M+ G L+K+F
Sbjct: 635 SNGFSGDAFTIKMVADLITDGRLDKSF 661
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,985,580
Number of Sequences: 539616
Number of extensions: 6875365
Number of successful extensions: 26765
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 18487
Number of HSP's gapped (non-prelim): 2584
length of query: 480
length of database: 191,569,459
effective HSP length: 121
effective length of query: 359
effective length of database: 126,275,923
effective search space: 45333056357
effective search space used: 45333056357
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)