Query 011654
Match_columns 480
No_of_seqs 357 out of 3221
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:36:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtf_A UDP-glucose 6-dehydroge 100.0 3.1E-94 1.1E-98 741.6 48.0 418 1-467 21-443 (444)
2 4a7p_A UDP-glucose dehydrogena 100.0 1.5E-92 5.1E-97 735.7 48.1 433 2-470 9-445 (446)
3 3gg2_A Sugar dehydrogenase, UD 100.0 2.5E-88 8.7E-93 707.5 49.6 432 2-470 3-440 (450)
4 3g79_A NDP-N-acetyl-D-galactos 100.0 2.3E-88 8E-93 707.9 46.0 434 1-473 18-476 (478)
5 3ojo_A CAP5O; rossmann fold, c 100.0 8.4E-88 2.9E-92 695.2 42.9 410 2-469 12-426 (431)
6 2o3j_A UDP-glucose 6-dehydroge 100.0 1.4E-85 4.9E-90 693.4 53.9 462 1-473 9-473 (481)
7 2q3e_A UDP-glucose 6-dehydroge 100.0 1.8E-82 6.3E-87 668.4 54.3 459 1-468 5-466 (467)
8 2y0c_A BCEC, UDP-glucose dehyd 100.0 4.6E-83 1.6E-87 672.5 49.1 451 2-473 9-465 (478)
9 3pid_A UDP-glucose 6-dehydroge 100.0 1.6E-76 5.4E-81 610.0 36.4 387 1-453 36-424 (432)
10 1mv8_A GMD, GDP-mannose 6-dehy 100.0 3.3E-75 1.1E-79 608.5 43.1 423 2-467 1-436 (436)
11 1dlj_A UDP-glucose dehydrogena 100.0 9.7E-70 3.3E-74 561.0 38.5 396 2-452 1-401 (402)
12 3obb_A Probable 3-hydroxyisobu 100.0 3.4E-32 1.2E-36 269.4 24.4 250 1-300 3-271 (300)
13 3qha_A Putative oxidoreductase 100.0 8.7E-32 3E-36 266.6 23.4 249 2-301 16-281 (296)
14 4dll_A 2-hydroxy-3-oxopropiona 100.0 2.6E-31 9E-36 266.0 26.1 250 1-301 31-291 (320)
15 4gbj_A 6-phosphogluconate dehy 100.0 1.5E-31 5.3E-36 264.6 23.3 249 3-301 7-267 (297)
16 3doj_A AT3G25530, dehydrogenas 100.0 1.4E-31 4.7E-36 266.9 22.7 251 1-301 21-283 (310)
17 3pef_A 6-phosphogluconate dehy 100.0 1.5E-30 5.1E-35 256.5 23.5 251 1-301 1-263 (287)
18 3g0o_A 3-hydroxyisobutyrate de 100.0 3.1E-30 1.1E-34 256.3 23.8 251 2-301 8-271 (303)
19 3pdu_A 3-hydroxyisobutyrate de 100.0 1.4E-30 4.9E-35 256.6 21.2 251 1-301 1-263 (287)
20 2h78_A Hibadh, 3-hydroxyisobut 100.0 1.5E-29 5.1E-34 251.1 24.4 250 1-300 3-271 (302)
21 4ezb_A Uncharacterized conserv 100.0 6.9E-28 2.4E-32 240.8 21.4 242 1-302 24-283 (317)
22 3qsg_A NAD-binding phosphogluc 100.0 1.3E-27 4.6E-32 238.2 21.4 248 1-304 24-283 (312)
23 3l6d_A Putative oxidoreductase 99.9 3.1E-26 1.1E-30 227.7 20.3 246 1-301 9-271 (306)
24 4e21_A 6-phosphogluconate dehy 99.9 4.4E-25 1.5E-29 223.4 26.4 246 2-300 23-327 (358)
25 1vpd_A Tartronate semialdehyde 99.9 7.9E-25 2.7E-29 216.5 25.6 250 2-301 6-267 (299)
26 1yb4_A Tartronic semialdehyde 99.9 6.7E-25 2.3E-29 216.5 20.4 252 1-303 3-266 (295)
27 2gf2_A Hibadh, 3-hydroxyisobut 99.9 3.3E-24 1.1E-28 211.7 22.6 249 2-300 1-268 (296)
28 3cky_A 2-hydroxymethyl glutara 99.9 3.4E-23 1.2E-27 204.9 27.8 250 2-301 5-267 (301)
29 3k96_A Glycerol-3-phosphate de 99.9 7.1E-24 2.4E-28 214.6 20.7 277 2-314 30-348 (356)
30 4gwg_A 6-phosphogluconate dehy 99.9 9.2E-24 3.1E-28 220.8 20.8 207 1-251 4-221 (484)
31 2uyy_A N-PAC protein; long-cha 99.9 3.3E-23 1.1E-27 206.6 22.0 249 2-300 31-291 (316)
32 2cvz_A Dehydrogenase, 3-hydrox 99.9 4.3E-23 1.5E-27 202.8 20.8 249 1-302 1-259 (289)
33 2p4q_A 6-phosphogluconate dehy 99.9 2.9E-22 9.8E-27 211.1 21.4 251 2-298 11-289 (497)
34 2pgd_A 6-phosphogluconate dehy 99.9 5.5E-21 1.9E-25 201.2 22.3 249 2-297 3-281 (482)
35 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 1.6E-20 5.6E-25 197.3 25.8 254 2-298 2-284 (478)
36 2zyd_A 6-phosphogluconate dehy 99.9 6.3E-21 2.2E-25 200.3 21.1 251 2-299 16-295 (480)
37 1i36_A Conserved hypothetical 99.9 4.7E-21 1.6E-25 186.0 17.8 232 2-301 1-244 (264)
38 1txg_A Glycerol-3-phosphate de 99.9 1.4E-20 4.8E-25 188.7 21.6 275 2-314 1-331 (335)
39 1yj8_A Glycerol-3-phosphate de 99.9 3.3E-21 1.1E-25 196.9 16.5 268 1-303 21-352 (375)
40 2iz1_A 6-phosphogluconate dehy 99.9 3.3E-20 1.1E-24 194.9 23.9 251 2-298 6-286 (474)
41 1evy_A Glycerol-3-phosphate de 99.9 2E-21 6.8E-26 197.7 13.1 279 3-316 17-344 (366)
42 1x0v_A GPD-C, GPDH-C, glycerol 99.8 1.4E-20 4.9E-25 190.3 16.1 266 2-302 9-333 (354)
43 1z82_A Glycerol-3-phosphate de 99.8 3.6E-20 1.2E-24 186.2 16.3 257 2-303 15-310 (335)
44 2ew2_A 2-dehydropantoate 2-red 99.8 2E-19 6.9E-24 178.4 20.9 266 1-299 3-302 (316)
45 3dtt_A NADP oxidoreductase; st 99.8 1E-18 3.6E-23 167.8 13.5 197 2-229 20-234 (245)
46 2g5c_A Prephenate dehydrogenas 99.8 7.3E-17 2.5E-21 157.9 23.4 196 1-235 1-200 (281)
47 2dpo_A L-gulonate 3-dehydrogen 99.7 3.5E-17 1.2E-21 162.9 19.3 209 1-255 6-228 (319)
48 1zej_A HBD-9, 3-hydroxyacyl-CO 99.7 1.1E-16 3.7E-21 157.2 19.3 194 2-254 13-207 (293)
49 3ggo_A Prephenate dehydrogenas 99.7 5E-16 1.7E-20 154.5 23.7 189 1-233 33-230 (314)
50 3mog_A Probable 3-hydroxybutyr 99.7 7.1E-17 2.4E-21 169.3 17.2 204 2-254 6-223 (483)
51 2qyt_A 2-dehydropantoate 2-red 99.7 1.3E-16 4.6E-21 158.3 16.7 265 2-298 9-306 (317)
52 4fgw_A Glycerol-3-phosphate de 99.7 8.2E-17 2.8E-21 163.3 15.1 217 2-248 35-294 (391)
53 1ks9_A KPA reductase;, 2-dehyd 99.7 2.6E-17 8.8E-22 161.3 11.1 253 2-298 1-280 (291)
54 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 3.3E-16 1.1E-20 154.9 19.0 207 1-254 15-239 (302)
55 1bg6_A N-(1-D-carboxylethyl)-L 99.7 1.9E-16 6.6E-21 160.0 17.6 296 2-342 5-355 (359)
56 3k6j_A Protein F01G10.3, confi 99.7 2.8E-16 9.7E-21 162.7 17.8 201 1-252 54-267 (460)
57 3b1f_A Putative prephenate deh 99.7 3.9E-15 1.3E-19 146.2 22.6 175 1-213 6-185 (290)
58 4e12_A Diketoreductase; oxidor 99.7 2.5E-15 8.7E-20 147.3 19.9 207 1-254 4-225 (283)
59 3d1l_A Putative NADP oxidoredu 99.7 1.5E-15 5E-20 147.3 17.2 197 2-253 11-212 (266)
60 2f1k_A Prephenate dehydrogenas 99.7 8.5E-15 2.9E-19 142.9 22.2 189 2-230 1-189 (279)
61 1wdk_A Fatty oxidation complex 99.7 9.3E-16 3.2E-20 168.3 16.9 202 1-251 314-528 (715)
62 2wtb_A MFP2, fatty acid multif 99.7 1.6E-15 5.4E-20 166.6 18.1 207 1-251 312-526 (725)
63 3ghy_A Ketopantoate reductase 99.6 3.7E-15 1.3E-19 149.6 18.1 260 1-296 3-310 (335)
64 3c24_A Putative oxidoreductase 99.6 1.3E-15 4.5E-20 149.4 14.2 204 1-253 11-230 (286)
65 1zcj_A Peroxisomal bifunctiona 99.6 6.6E-15 2.3E-19 154.0 19.3 205 1-252 37-250 (463)
66 3gt0_A Pyrroline-5-carboxylate 99.6 1.5E-14 5.3E-19 138.7 20.1 196 1-253 2-206 (247)
67 2izz_A Pyrroline-5-carboxylate 99.6 2.1E-14 7.3E-19 143.3 20.2 197 1-253 22-230 (322)
68 3ado_A Lambda-crystallin; L-gu 99.6 3.3E-14 1.1E-18 140.8 20.4 206 2-255 7-228 (319)
69 2pv7_A T-protein [includes: ch 99.6 3.6E-14 1.2E-18 140.1 18.7 223 2-318 22-248 (298)
70 3hwr_A 2-dehydropantoate 2-red 99.6 1.6E-14 5.5E-19 143.9 16.0 247 1-290 19-297 (318)
71 3hn2_A 2-dehydropantoate 2-red 99.6 2E-13 6.8E-18 135.6 22.6 255 2-290 3-288 (312)
72 3ktd_A Prephenate dehydrogenas 99.6 8.9E-14 3.1E-18 139.4 19.8 185 1-230 8-209 (341)
73 3i83_A 2-dehydropantoate 2-red 99.6 1.5E-13 5.3E-18 136.9 20.4 253 2-296 3-291 (320)
74 2ahr_A Putative pyrroline carb 99.5 9.8E-14 3.4E-18 133.9 16.6 194 1-253 3-199 (259)
75 3tri_A Pyrroline-5-carboxylate 99.5 6.4E-13 2.2E-17 129.9 22.3 193 2-252 4-207 (280)
76 1jay_A Coenzyme F420H2:NADP+ o 99.5 1.2E-13 4.2E-18 129.0 16.0 186 2-227 1-200 (212)
77 1yqg_A Pyrroline-5-carboxylate 99.5 9.7E-14 3.3E-18 134.1 15.0 190 2-252 1-197 (263)
78 2rcy_A Pyrroline carboxylate r 99.5 3.5E-13 1.2E-17 130.1 17.9 187 2-252 5-199 (262)
79 3c7a_A Octopine dehydrogenase; 99.5 4.1E-12 1.4E-16 130.6 23.3 218 1-244 2-269 (404)
80 2raf_A Putative dinucleotide-b 99.4 7.1E-13 2.4E-17 123.9 13.3 155 1-222 19-190 (209)
81 4huj_A Uncharacterized protein 99.4 1.1E-12 3.9E-17 123.5 8.8 166 1-214 23-204 (220)
82 3g17_A Similar to 2-dehydropan 99.3 6.6E-12 2.3E-16 123.5 13.0 192 2-243 3-216 (294)
83 3zwc_A Peroxisomal bifunctiona 99.3 1.4E-11 4.6E-16 135.0 16.7 204 1-252 316-529 (742)
84 1np3_A Ketol-acid reductoisome 99.3 1.4E-11 4.7E-16 123.7 12.9 194 2-247 17-223 (338)
85 2vns_A Metalloreductase steap3 99.3 3.5E-11 1.2E-15 112.8 13.3 171 1-219 28-205 (215)
86 2gcg_A Glyoxylate reductase/hy 99.2 6.3E-11 2.1E-15 118.5 12.9 134 2-176 156-292 (330)
87 2i76_A Hypothetical protein; N 99.2 1.6E-11 5.4E-16 119.7 7.5 183 1-245 2-190 (276)
88 3ego_A Probable 2-dehydropanto 99.2 6.2E-11 2.1E-15 117.3 10.8 200 2-240 3-226 (307)
89 3dfu_A Uncharacterized protein 99.2 7.7E-10 2.6E-14 104.3 16.5 154 1-239 6-162 (232)
90 2dbq_A Glyoxylate reductase; D 99.2 8E-11 2.8E-15 117.8 10.4 131 2-176 151-285 (334)
91 2yjz_A Metalloreductase steap4 98.7 5.5E-12 1.9E-16 117.1 0.0 166 2-218 20-192 (201)
92 1guz_A Malate dehydrogenase; o 99.1 2.5E-10 8.4E-15 113.2 11.5 122 2-137 1-127 (310)
93 2w2k_A D-mandelate dehydrogena 99.1 1.7E-10 6E-15 116.0 9.4 109 2-144 164-273 (348)
94 1pzg_A LDH, lactate dehydrogen 99.1 1.2E-09 4E-14 109.2 14.5 121 2-137 10-141 (331)
95 1t2d_A LDH-P, L-lactate dehydr 99.0 2.1E-09 7.3E-14 106.9 13.2 123 2-137 5-135 (322)
96 3gvx_A Glycerate dehydrogenase 99.0 6.7E-10 2.3E-14 108.6 9.1 105 2-145 123-227 (290)
97 2hjr_A Malate dehydrogenase; m 99.0 3.8E-09 1.3E-13 105.4 14.7 117 2-135 15-138 (328)
98 3ba1_A HPPR, hydroxyphenylpyru 99.0 1.2E-09 4.2E-14 109.0 10.6 104 2-144 165-268 (333)
99 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 4.4E-09 1.5E-13 104.0 13.2 119 1-136 1-130 (309)
100 3gg9_A D-3-phosphoglycerate de 98.9 5.7E-09 1.9E-13 104.8 13.4 109 2-145 161-269 (352)
101 2d0i_A Dehydrogenase; structur 98.9 4.4E-09 1.5E-13 105.1 12.3 132 2-177 147-282 (333)
102 1ur5_A Malate dehydrogenase; o 98.9 6E-09 2E-13 103.1 13.1 119 2-137 3-128 (309)
103 1gdh_A D-glycerate dehydrogena 98.9 4.2E-09 1.5E-13 104.6 12.0 107 2-144 147-255 (320)
104 3jtm_A Formate dehydrogenase, 98.9 2.4E-09 8.1E-14 107.5 9.3 109 2-144 165-273 (351)
105 2ekl_A D-3-phosphoglycerate de 98.9 3.8E-09 1.3E-13 104.6 10.4 107 2-144 143-249 (313)
106 4g2n_A D-isomer specific 2-hyd 98.9 1.1E-08 3.7E-13 102.4 13.2 107 2-144 174-280 (345)
107 1wwk_A Phosphoglycerate dehydr 98.9 1.3E-08 4.6E-13 100.4 13.5 107 2-144 143-249 (307)
108 1a5z_A L-lactate dehydrogenase 98.9 1.8E-08 6.1E-13 100.1 13.7 117 2-136 1-124 (319)
109 4dgs_A Dehydrogenase; structur 98.9 7.9E-09 2.7E-13 103.2 10.9 103 2-144 172-275 (340)
110 3evt_A Phosphoglycerate dehydr 98.8 4.5E-09 1.6E-13 104.3 8.6 107 2-144 138-244 (324)
111 1ygy_A PGDH, D-3-phosphoglycer 98.8 1.7E-08 6E-13 107.0 13.1 106 2-144 143-249 (529)
112 1lld_A L-lactate dehydrogenase 98.8 3.1E-08 1E-12 98.2 13.9 117 1-138 7-134 (319)
113 1mx3_A CTBP1, C-terminal bindi 98.8 2.9E-08 1E-12 99.5 13.6 108 2-144 169-276 (347)
114 2g76_A 3-PGDH, D-3-phosphoglyc 98.8 3.1E-08 1E-12 98.9 13.5 106 2-144 166-272 (335)
115 4hy3_A Phosphoglycerate oxidor 98.8 3.7E-08 1.3E-12 99.1 14.0 107 2-144 177-283 (365)
116 2ewd_A Lactate dehydrogenase,; 98.8 2.8E-08 9.5E-13 98.6 13.0 116 2-133 5-126 (317)
117 1y6j_A L-lactate dehydrogenase 98.8 2.4E-08 8.1E-13 99.1 12.3 115 2-137 8-132 (318)
118 3k5p_A D-3-phosphoglycerate de 98.8 1.4E-08 4.9E-13 103.6 10.6 105 2-144 157-261 (416)
119 3hg7_A D-isomer specific 2-hyd 98.8 3.4E-09 1.1E-13 105.2 5.7 107 2-144 141-247 (324)
120 1qp8_A Formate dehydrogenase; 98.8 1.6E-08 5.3E-13 99.7 10.2 102 2-144 125-227 (303)
121 2pi1_A D-lactate dehydrogenase 98.8 3.2E-08 1.1E-12 98.7 12.5 106 2-144 142-247 (334)
122 4e5n_A Thermostable phosphite 98.8 1.5E-08 5.2E-13 100.9 10.1 108 2-144 146-253 (330)
123 3fr7_A Putative ketol-acid red 98.8 2.1E-08 7.2E-13 103.0 11.3 209 1-251 54-281 (525)
124 2nac_A NAD-dependent formate d 98.8 1.2E-08 4.1E-13 103.7 9.5 108 2-144 192-300 (393)
125 1oju_A MDH, malate dehydrogena 98.8 6.7E-08 2.3E-12 94.6 14.4 118 2-135 1-125 (294)
126 2j6i_A Formate dehydrogenase; 98.8 2.4E-08 8.2E-13 100.9 11.4 109 2-144 165-274 (364)
127 2v6b_A L-LDH, L-lactate dehydr 98.8 3E-08 1E-12 97.8 11.5 116 2-134 1-122 (304)
128 1sc6_A PGDH, D-3-phosphoglycer 98.8 3.2E-08 1.1E-12 101.1 12.0 105 2-144 146-250 (404)
129 2yq5_A D-isomer specific 2-hyd 98.7 5.2E-08 1.8E-12 97.4 12.2 105 2-144 149-253 (343)
130 3gvi_A Malate dehydrogenase; N 98.7 9.7E-08 3.3E-12 94.7 13.3 120 1-136 7-132 (324)
131 3d0o_A L-LDH 1, L-lactate dehy 98.7 1E-07 3.5E-12 94.5 13.3 121 2-136 7-131 (317)
132 3pqe_A L-LDH, L-lactate dehydr 98.7 6.4E-08 2.2E-12 96.1 11.3 112 2-135 6-129 (326)
133 3pp8_A Glyoxylate/hydroxypyruv 98.7 6.7E-09 2.3E-13 102.8 3.7 107 2-144 140-246 (315)
134 2i99_A MU-crystallin homolog; 98.7 1.5E-08 5.2E-13 100.3 6.3 106 2-144 136-242 (312)
135 2cuk_A Glycerate dehydrogenase 98.7 7.3E-08 2.5E-12 95.3 10.9 99 2-142 145-244 (311)
136 1lss_A TRK system potassium up 98.7 1.3E-07 4.6E-12 81.1 11.3 125 2-168 5-134 (140)
137 3ldh_A Lactate dehydrogenase; 98.7 1.1E-07 3.7E-12 94.4 11.6 120 1-136 21-146 (330)
138 3tl2_A Malate dehydrogenase; c 98.6 4.9E-07 1.7E-11 89.3 14.5 118 2-136 9-135 (315)
139 1j4a_A D-LDH, D-lactate dehydr 98.6 5.8E-08 2E-12 96.9 7.7 106 2-144 147-252 (333)
140 3fi9_A Malate dehydrogenase; s 98.6 3.6E-07 1.2E-11 91.3 13.1 117 2-137 9-135 (343)
141 3p7m_A Malate dehydrogenase; p 98.6 4E-07 1.4E-11 90.3 13.3 120 1-136 5-130 (321)
142 1mld_A Malate dehydrogenase; o 98.6 3.7E-07 1.2E-11 90.4 12.4 113 2-137 1-126 (314)
143 1dxy_A D-2-hydroxyisocaproate 98.5 8E-08 2.7E-12 95.9 7.2 105 2-144 146-250 (333)
144 3oet_A Erythronate-4-phosphate 98.5 1.1E-07 3.7E-12 96.0 7.9 108 2-144 120-227 (381)
145 2o4c_A Erythronate-4-phosphate 98.5 1.4E-07 4.8E-12 95.3 8.2 108 2-144 117-224 (380)
146 1xdw_A NAD+-dependent (R)-2-hy 98.5 1.1E-07 3.6E-12 95.0 7.1 105 2-144 147-251 (331)
147 1smk_A Malate dehydrogenase, g 98.5 4.5E-07 1.5E-11 90.2 11.7 113 1-136 8-133 (326)
148 3nep_X Malate dehydrogenase; h 98.5 4.3E-07 1.5E-11 89.7 11.2 119 2-136 1-126 (314)
149 1obb_A Maltase, alpha-glucosid 98.5 5.9E-07 2E-11 93.4 12.7 79 2-88 4-87 (480)
150 1ez4_A Lactate dehydrogenase; 98.5 9.5E-07 3.3E-11 87.5 12.9 116 2-136 6-129 (318)
151 2dc1_A L-aspartate dehydrogena 98.5 4.4E-07 1.5E-11 85.9 9.9 97 2-145 1-102 (236)
152 1ldn_A L-lactate dehydrogenase 98.5 1.4E-06 4.9E-11 86.2 13.8 119 1-136 6-131 (316)
153 1u8x_X Maltose-6'-phosphate gl 98.4 8.3E-07 2.8E-11 92.3 11.7 81 2-90 29-114 (472)
154 2xxj_A L-LDH, L-lactate dehydr 98.4 1.9E-06 6.4E-11 85.1 13.7 117 2-137 1-125 (310)
155 4aj2_A L-lactate dehydrogenase 98.4 9.6E-07 3.3E-11 87.8 11.4 117 1-134 19-142 (331)
156 2ho3_A Oxidoreductase, GFO/IDH 98.4 1.8E-06 6.1E-11 85.6 13.0 71 1-89 1-73 (325)
157 2zqz_A L-LDH, L-lactate dehydr 98.4 1.8E-06 6.2E-11 85.8 12.8 116 2-136 10-133 (326)
158 3ic5_A Putative saccharopine d 98.4 5.6E-07 1.9E-11 74.7 7.8 74 1-88 5-79 (118)
159 3vku_A L-LDH, L-lactate dehydr 98.4 1.3E-06 4.5E-11 86.6 11.6 114 2-135 10-132 (326)
160 2d4a_B Malate dehydrogenase; a 98.4 2E-06 6.8E-11 84.8 12.8 118 3-136 1-124 (308)
161 4hkt_A Inositol 2-dehydrogenas 98.4 1.2E-06 4.1E-11 87.1 11.3 70 1-90 3-75 (331)
162 2hk9_A Shikimate dehydrogenase 98.4 8E-07 2.7E-11 86.2 9.7 93 2-128 130-222 (275)
163 2x0j_A Malate dehydrogenase; o 98.4 2.4E-06 8.2E-11 83.4 12.9 120 2-135 1-125 (294)
164 3oj0_A Glutr, glutamyl-tRNA re 98.4 3.1E-07 1.1E-11 80.0 5.6 70 2-89 22-91 (144)
165 3euw_A MYO-inositol dehydrogen 98.4 1.3E-06 4.4E-11 87.4 11.0 70 2-90 5-77 (344)
166 2i6t_A Ubiquitin-conjugating e 98.4 2E-06 7E-11 84.5 12.0 111 1-133 14-130 (303)
167 3q2i_A Dehydrogenase; rossmann 98.4 1.4E-06 4.8E-11 87.5 10.7 71 2-90 14-87 (354)
168 3uuw_A Putative oxidoreductase 98.4 7.9E-07 2.7E-11 87.5 8.6 70 2-90 7-78 (308)
169 1y81_A Conserved hypothetical 98.4 6.8E-07 2.3E-11 77.5 7.1 98 2-145 15-116 (138)
170 3ezy_A Dehydrogenase; structur 98.4 1.2E-06 4.3E-11 87.5 10.1 71 1-89 2-75 (344)
171 2rir_A Dipicolinate synthase, 98.3 3.1E-06 1.1E-10 83.0 11.9 95 2-133 158-252 (300)
172 2g1u_A Hypothetical protein TM 98.3 4.4E-06 1.5E-10 73.5 11.2 40 2-43 20-59 (155)
173 1b8p_A Protein (malate dehydro 98.3 5.2E-06 1.8E-10 82.6 13.0 116 2-136 6-141 (329)
174 3db2_A Putative NADPH-dependen 98.3 1.6E-06 5.6E-11 87.0 9.4 70 2-90 6-78 (354)
175 3d4o_A Dipicolinate synthase s 98.3 4E-06 1.4E-10 82.0 11.9 93 2-133 156-250 (293)
176 3mz0_A Inositol 2-dehydrogenas 98.3 2.7E-06 9.3E-11 85.0 10.8 72 2-90 3-78 (344)
177 1x7d_A Ornithine cyclodeaminas 98.3 1.4E-06 4.9E-11 87.3 8.6 108 2-139 130-237 (350)
178 2d5c_A AROE, shikimate 5-dehyd 98.3 1.4E-06 4.8E-11 83.8 8.0 103 3-143 118-220 (263)
179 1s6y_A 6-phospho-beta-glucosid 98.2 2.7E-06 9.3E-11 88.0 10.1 81 2-90 8-95 (450)
180 3llv_A Exopolyphosphatase-rela 98.2 4.2E-06 1.4E-10 72.2 9.7 43 1-45 6-48 (141)
181 3fef_A Putative glucosidase LP 98.2 3.4E-06 1.2E-10 87.1 10.6 76 2-88 6-85 (450)
182 3cea_A MYO-inositol 2-dehydrog 98.2 5.5E-06 1.9E-10 82.7 11.6 71 2-89 9-82 (346)
183 3e9m_A Oxidoreductase, GFO/IDH 98.2 1.9E-06 6.3E-11 85.8 8.1 71 2-90 6-79 (330)
184 3fwz_A Inner membrane protein 98.2 4.2E-06 1.4E-10 72.4 9.2 71 2-88 8-81 (140)
185 3c1a_A Putative oxidoreductase 98.2 3.3E-06 1.1E-10 83.4 9.5 67 2-89 11-80 (315)
186 3e18_A Oxidoreductase; dehydro 98.2 6.1E-06 2.1E-10 83.1 11.0 69 2-90 6-77 (359)
187 3rc1_A Sugar 3-ketoreductase; 98.2 5.4E-06 1.8E-10 83.2 10.4 70 2-90 28-101 (350)
188 3ec7_A Putative dehydrogenase; 98.2 4E-06 1.4E-10 84.4 9.1 72 2-90 24-99 (357)
189 2duw_A Putative COA-binding pr 98.2 1.1E-06 3.9E-11 76.7 4.3 98 2-145 14-117 (145)
190 3m2t_A Probable dehydrogenase; 98.1 8.3E-06 2.8E-10 82.1 10.9 70 2-89 6-79 (359)
191 1xea_A Oxidoreductase, GFO/IDH 98.1 4.7E-06 1.6E-10 82.5 8.8 71 1-89 2-74 (323)
192 3f4l_A Putative oxidoreductase 98.1 2.2E-06 7.5E-11 85.8 6.4 108 1-144 2-115 (345)
193 4had_A Probable oxidoreductase 98.1 7.5E-06 2.6E-10 81.9 9.9 108 1-144 23-136 (350)
194 1v8b_A Adenosylhomocysteinase; 98.1 1.5E-05 5.1E-10 82.7 12.0 99 2-139 258-357 (479)
195 3e82_A Putative oxidoreductase 98.1 1.4E-05 4.8E-10 80.5 11.7 104 2-144 8-117 (364)
196 2hmt_A YUAA protein; RCK, KTN, 98.1 1.2E-05 4E-10 69.0 9.2 41 2-44 7-47 (144)
197 4dio_A NAD(P) transhydrogenase 98.1 5.1E-06 1.7E-10 84.3 7.9 113 2-128 191-313 (405)
198 1tlt_A Putative oxidoreductase 98.1 6.7E-06 2.3E-10 81.2 8.5 69 2-89 6-76 (319)
199 3p2y_A Alanine dehydrogenase/p 98.1 5.3E-06 1.8E-10 83.5 7.7 110 2-128 185-303 (381)
200 3qy9_A DHPR, dihydrodipicolina 98.1 9.9E-06 3.4E-10 76.9 9.1 107 1-159 3-110 (243)
201 3c85_A Putative glutathione-re 98.1 2.3E-05 7.8E-10 70.7 11.0 71 2-88 40-115 (183)
202 1omo_A Alanine dehydrogenase; 98.1 1.3E-05 4.6E-10 79.3 10.2 98 2-133 126-223 (322)
203 3evn_A Oxidoreductase, GFO/IDH 98.1 7.1E-06 2.4E-10 81.5 8.2 71 2-90 6-79 (329)
204 1ydw_A AX110P-like protein; st 98.1 1.9E-05 6.4E-10 79.5 11.4 111 1-144 6-121 (362)
205 3d64_A Adenosylhomocysteinase; 98.0 1.7E-05 5.7E-10 82.6 11.1 91 2-131 278-368 (494)
206 1o6z_A MDH, malate dehydrogena 98.0 3.6E-05 1.2E-09 75.6 12.8 117 2-136 1-127 (303)
207 2glx_A 1,5-anhydro-D-fructose 98.0 1.2E-05 4.1E-10 79.8 9.5 69 2-89 1-73 (332)
208 3hdj_A Probable ornithine cycl 98.0 1.3E-05 4.4E-10 79.1 9.0 98 2-133 122-219 (313)
209 3l4b_C TRKA K+ channel protien 98.0 4E-05 1.4E-09 71.3 11.8 41 2-44 1-41 (218)
210 3hhp_A Malate dehydrogenase; M 98.0 3.1E-05 1.1E-09 76.3 11.6 116 2-137 1-127 (312)
211 3ohs_X Trans-1,2-dihydrobenzen 98.0 1.6E-05 5.4E-10 79.1 9.3 72 1-90 2-78 (334)
212 3kux_A Putative oxidoreductase 98.0 4.1E-05 1.4E-09 76.7 11.8 68 2-90 8-79 (352)
213 2p2s_A Putative oxidoreductase 98.0 1.5E-05 5.2E-10 79.2 8.5 70 2-90 5-78 (336)
214 3gdo_A Uncharacterized oxidore 97.9 3.9E-05 1.3E-09 77.1 11.2 68 2-90 6-77 (358)
215 2z2v_A Hypothetical protein PH 97.9 1.6E-05 5.5E-10 80.2 8.2 109 2-145 17-125 (365)
216 3moi_A Probable dehydrogenase; 97.9 1.9E-05 6.4E-10 80.3 8.7 71 1-90 2-76 (387)
217 3ce6_A Adenosylhomocysteinase; 97.9 4.5E-05 1.5E-09 79.6 11.6 90 2-130 275-364 (494)
218 3bio_A Oxidoreductase, GFO/IDH 97.9 3.7E-05 1.3E-09 75.5 10.4 88 2-129 10-98 (304)
219 3abi_A Putative uncharacterize 97.9 1.4E-05 4.7E-10 80.6 7.2 71 2-88 17-87 (365)
220 3h9u_A Adenosylhomocysteinase; 97.9 3.1E-05 1.1E-09 79.1 9.6 90 2-130 212-301 (436)
221 2egg_A AROE, shikimate 5-dehyd 97.9 2.2E-05 7.6E-10 76.9 8.2 113 2-144 142-255 (297)
222 2ixa_A Alpha-N-acetylgalactosa 97.9 6.1E-05 2.1E-09 78.0 11.7 76 2-90 21-103 (444)
223 3u95_A Glycoside hydrolase, fa 97.8 0.00013 4.4E-09 76.1 13.2 78 2-87 1-85 (477)
224 3kb6_A D-lactate dehydrogenase 97.8 0.00015 5.1E-09 72.1 12.8 106 2-144 142-247 (334)
225 1zh8_A Oxidoreductase; TM0312, 97.8 6.2E-05 2.1E-09 75.0 10.0 72 2-90 19-94 (340)
226 1leh_A Leucine dehydrogenase; 97.8 3E-05 1E-09 77.9 7.5 112 2-160 174-286 (364)
227 1h6d_A Precursor form of gluco 97.8 3.4E-05 1.2E-09 79.6 7.8 73 2-89 84-161 (433)
228 3v5n_A Oxidoreductase; structu 97.8 7.4E-05 2.5E-09 76.7 9.8 73 2-90 38-122 (417)
229 4gmf_A Yersiniabactin biosynth 97.8 4.1E-05 1.4E-09 77.4 7.7 110 2-144 8-118 (372)
230 3u3x_A Oxidoreductase; structu 97.7 0.00017 5.8E-09 72.5 12.0 69 2-89 27-99 (361)
231 3dty_A Oxidoreductase, GFO/IDH 97.7 4.9E-05 1.7E-09 77.5 8.1 73 2-90 13-97 (398)
232 3n58_A Adenosylhomocysteinase; 97.7 0.00012 4.2E-09 74.6 10.8 89 2-129 248-336 (464)
233 4f3y_A DHPR, dihydrodipicolina 97.7 3.4E-05 1.2E-09 74.4 6.3 74 1-87 7-82 (272)
234 3fhl_A Putative oxidoreductase 97.7 6.7E-05 2.3E-09 75.4 8.5 68 2-90 6-77 (362)
235 2vhw_A Alanine dehydrogenase; 97.7 5.9E-05 2E-09 76.4 7.9 97 2-127 169-268 (377)
236 4gbj_A 6-phosphogluconate dehy 97.7 6.8E-05 2.3E-09 73.4 8.0 112 325-468 6-124 (297)
237 3upl_A Oxidoreductase; rossman 97.7 0.00016 5.5E-09 74.2 10.7 87 2-89 24-118 (446)
238 4gqa_A NAD binding oxidoreduct 97.7 0.00012 4.2E-09 74.8 9.6 72 2-90 27-108 (412)
239 3don_A Shikimate dehydrogenase 97.7 3.7E-05 1.3E-09 74.4 5.4 98 2-133 118-216 (277)
240 4h7p_A Malate dehydrogenase; s 97.6 0.00025 8.5E-09 70.7 11.1 115 3-134 26-156 (345)
241 3o9z_A Lipopolysaccaride biosy 97.6 0.00013 4.6E-09 71.7 8.9 70 1-90 3-84 (312)
242 3d4o_A Dipicolinate synthase s 97.6 0.0011 3.7E-08 64.5 15.4 122 308-465 139-265 (293)
243 3gvp_A Adenosylhomocysteinase 97.6 0.00026 8.9E-09 72.1 11.1 89 2-129 221-309 (435)
244 3u62_A Shikimate dehydrogenase 97.6 7.8E-05 2.7E-09 71.2 6.9 67 3-89 110-177 (253)
245 5mdh_A Malate dehydrogenase; o 97.6 0.00033 1.1E-08 69.6 11.4 114 2-135 4-136 (333)
246 3oa2_A WBPB; oxidoreductase, s 97.6 0.00015 5E-09 71.7 8.8 70 1-90 3-85 (318)
247 3gg9_A D-3-phosphoglycerate de 97.6 0.00017 5.7E-09 72.2 9.2 101 320-453 156-259 (352)
248 3i23_A Oxidoreductase, GFO/IDH 97.6 0.00029 9.8E-09 70.4 10.9 71 2-90 3-77 (349)
249 1f06_A MESO-diaminopimelate D- 97.6 8.4E-05 2.9E-09 73.5 6.8 65 2-89 4-69 (320)
250 3jtm_A Formate dehydrogenase, 97.6 0.00033 1.1E-08 70.1 11.0 104 320-455 160-266 (351)
251 2nvw_A Galactose/lactose metab 97.6 0.00021 7.2E-09 74.6 10.0 73 2-89 40-119 (479)
252 3oqb_A Oxidoreductase; structu 97.6 0.00017 5.8E-09 72.9 8.9 72 2-91 7-96 (383)
253 4g2n_A D-isomer specific 2-hyd 97.5 0.00036 1.2E-08 69.5 10.8 102 320-455 169-273 (345)
254 2eez_A Alanine dehydrogenase; 97.5 7.6E-05 2.6E-09 75.3 5.8 101 2-129 167-268 (369)
255 1hye_A L-lactate/malate dehydr 97.5 0.0007 2.4E-08 66.6 12.6 121 2-136 1-130 (313)
256 3l9w_A Glutathione-regulated p 97.5 7.7E-05 2.6E-09 76.4 5.7 71 2-88 5-78 (413)
257 1id1_A Putative potassium chan 97.5 0.00023 8E-09 62.1 7.8 40 2-43 4-44 (153)
258 4hy3_A Phosphoglycerate oxidor 97.5 0.00051 1.7E-08 68.9 11.2 101 320-454 172-275 (365)
259 1x13_A NAD(P) transhydrogenase 97.5 0.00025 8.6E-09 72.3 9.1 41 2-44 173-213 (401)
260 3btv_A Galactose/lactose metab 97.5 0.00022 7.4E-09 73.7 8.6 73 2-89 21-100 (438)
261 4h3v_A Oxidoreductase domain p 97.5 0.00018 6.2E-09 72.4 7.5 71 3-91 8-88 (390)
262 4e21_A 6-phosphogluconate dehy 97.4 0.00043 1.5E-08 69.5 10.0 112 323-467 21-141 (358)
263 1up7_A 6-phospho-beta-glucosid 97.4 0.00061 2.1E-08 69.7 11.2 78 1-89 2-84 (417)
264 1dih_A Dihydrodipicolinate red 97.4 9.1E-05 3.1E-09 71.5 4.5 73 2-86 6-80 (273)
265 2w2k_A D-mandelate dehydrogena 97.4 0.00068 2.3E-08 67.7 11.0 105 319-455 158-266 (348)
266 3h2s_A Putative NADH-flavin re 97.4 0.0019 6.4E-08 59.4 13.3 71 2-88 1-72 (224)
267 4e5n_A Thermostable phosphite 97.4 0.00053 1.8E-08 68.0 10.1 102 320-454 141-245 (330)
268 2rir_A Dipicolinate synthase, 97.4 0.0044 1.5E-07 60.3 16.5 114 318-465 151-267 (300)
269 3ew7_A LMO0794 protein; Q8Y8U8 97.4 0.0013 4.6E-08 60.1 12.1 71 2-89 1-72 (221)
270 3gvx_A Glycerate dehydrogenase 97.4 0.00045 1.5E-08 67.2 9.0 97 321-454 119-218 (290)
271 1iuk_A Hypothetical protein TT 97.4 0.00017 5.7E-09 62.4 5.3 100 2-145 14-117 (140)
272 3pef_A 6-phosphogluconate dehy 97.4 0.0006 2E-08 66.0 9.8 108 325-464 2-118 (287)
273 1gpj_A Glutamyl-tRNA reductase 97.4 0.00068 2.3E-08 69.2 10.7 70 2-89 168-238 (404)
274 3obb_A Probable 3-hydroxyisobu 97.4 0.00028 9.6E-09 69.1 7.4 110 325-466 4-122 (300)
275 4fb5_A Probable oxidoreductase 97.4 0.00027 9.2E-09 71.2 7.4 72 3-91 27-107 (393)
276 4dll_A 2-hydroxy-3-oxopropiona 97.4 0.00068 2.3E-08 66.8 10.1 110 323-465 30-148 (320)
277 3phh_A Shikimate dehydrogenase 97.3 0.0003 1E-08 67.6 7.1 96 2-133 119-214 (269)
278 4dgs_A Dehydrogenase; structur 97.3 0.00077 2.6E-08 67.0 10.1 93 319-448 166-259 (340)
279 3qha_A Putative oxidoreductase 97.3 0.00095 3.3E-08 65.0 10.7 108 324-465 15-129 (296)
280 2g76_A 3-PGDH, D-3-phosphoglyc 97.3 0.0012 4.2E-08 65.5 11.5 100 320-453 161-263 (335)
281 1mx3_A CTBP1, C-terminal bindi 97.3 0.00071 2.4E-08 67.5 9.8 101 321-454 165-268 (347)
282 3ius_A Uncharacterized conserv 97.3 0.00036 1.2E-08 67.0 7.5 69 1-88 5-73 (286)
283 3eag_A UDP-N-acetylmuramate:L- 97.3 0.0018 6.3E-08 63.9 12.6 115 1-145 4-134 (326)
284 1gdh_A D-glycerate dehydrogena 97.3 0.00097 3.3E-08 65.8 10.3 100 321-453 143-246 (320)
285 2nac_A NAD-dependent formate d 97.3 0.001 3.6E-08 67.3 10.8 102 320-453 187-291 (393)
286 2dbq_A Glyoxylate reductase; D 97.3 0.0012 4.2E-08 65.5 11.0 95 320-448 146-241 (334)
287 2gcg_A Glyoxylate reductase/hy 97.3 0.00091 3.1E-08 66.3 10.0 102 320-454 151-255 (330)
288 2d59_A Hypothetical protein PH 97.3 0.00075 2.6E-08 58.5 8.2 98 2-145 23-124 (144)
289 2pi1_A D-lactate dehydrogenase 97.3 0.0009 3.1E-08 66.4 9.8 100 321-455 138-240 (334)
290 3doj_A AT3G25530, dehydrogenas 97.3 0.0008 2.7E-08 66.0 9.3 110 323-464 20-138 (310)
291 1wwk_A Phosphoglycerate dehydr 97.3 0.0016 5.3E-08 63.9 11.3 100 320-453 138-240 (307)
292 1l7d_A Nicotinamide nucleotide 97.2 0.00076 2.6E-08 68.3 9.0 41 2-44 173-213 (384)
293 4ew6_A D-galactose-1-dehydroge 97.2 0.00038 1.3E-08 69.0 6.6 61 2-88 26-91 (330)
294 3ulk_A Ketol-acid reductoisome 97.2 0.0021 7.2E-08 65.1 11.9 93 2-128 38-133 (491)
295 1cf2_P Protein (glyceraldehyde 97.2 0.00017 5.9E-09 71.7 4.0 86 1-88 1-88 (337)
296 1b7g_O Protein (glyceraldehyde 97.2 0.0008 2.7E-08 67.0 8.9 84 1-88 1-87 (340)
297 2d0i_A Dehydrogenase; structur 97.2 0.0013 4.4E-08 65.3 10.4 93 321-448 143-236 (333)
298 2czc_A Glyceraldehyde-3-phosph 97.2 0.0002 6.9E-09 71.2 4.3 83 2-89 3-90 (334)
299 2yq5_A D-isomer specific 2-hyd 97.2 0.00096 3.3E-08 66.4 9.2 99 321-455 145-246 (343)
300 2j6i_A Formate dehydrogenase; 97.2 0.0013 4.3E-08 66.2 10.1 103 320-454 160-266 (364)
301 3ba1_A HPPR, hydroxyphenylpyru 97.2 0.0012 4.3E-08 65.4 9.8 93 320-449 160-253 (333)
302 3r6d_A NAD-dependent epimerase 97.2 0.00074 2.5E-08 62.3 7.7 73 1-87 4-82 (221)
303 2ekl_A D-3-phosphoglycerate de 97.2 0.0019 6.4E-08 63.5 10.9 100 320-453 138-240 (313)
304 1ygy_A PGDH, D-3-phosphoglycer 97.2 0.0012 4.2E-08 69.7 10.0 95 320-448 138-233 (529)
305 3ijp_A DHPR, dihydrodipicolina 97.1 0.00061 2.1E-08 66.0 6.8 122 2-159 22-146 (288)
306 3lk7_A UDP-N-acetylmuramoylala 97.1 0.0029 1E-07 65.4 12.4 114 2-145 10-138 (451)
307 3evt_A Phosphoglycerate dehydr 97.1 0.00097 3.3E-08 65.9 8.2 101 320-454 133-236 (324)
308 1sc6_A PGDH, D-3-phosphoglycer 97.1 0.0014 4.8E-08 66.7 9.4 98 320-453 141-241 (404)
309 1y7t_A Malate dehydrogenase; N 97.1 0.0032 1.1E-07 62.2 11.7 73 2-89 5-91 (327)
310 1pjc_A Protein (L-alanine dehy 97.1 0.0015 5.3E-08 65.5 9.4 99 2-130 168-270 (361)
311 1ff9_A Saccharopine reductase; 97.1 0.0028 9.7E-08 65.5 11.6 75 2-88 4-78 (450)
312 2b0j_A 5,10-methenyltetrahydro 97.1 0.11 3.6E-06 49.5 20.9 108 64-199 127-235 (358)
313 1nvm_B Acetaldehyde dehydrogen 97.1 0.00049 1.7E-08 67.7 5.4 70 2-88 5-81 (312)
314 2nu8_A Succinyl-COA ligase [AD 97.1 0.0018 6.2E-08 62.9 9.4 65 2-89 8-75 (288)
315 7mdh_A Protein (malate dehydro 97.1 0.0026 8.9E-08 63.8 10.7 116 2-135 33-165 (375)
316 1y81_A Conserved hypothetical 97.0 0.0025 8.7E-08 54.7 9.0 106 323-464 13-121 (138)
317 2axq_A Saccharopine dehydrogen 97.0 0.0014 4.7E-08 68.1 8.6 76 1-88 23-98 (467)
318 3g0o_A 3-hydroxyisobutyrate de 97.0 0.00096 3.3E-08 65.2 7.1 109 324-464 7-125 (303)
319 3k5p_A D-3-phosphoglycerate de 97.0 0.0018 6.2E-08 65.9 9.3 98 321-454 153-253 (416)
320 2aef_A Calcium-gated potassium 97.0 0.00047 1.6E-08 64.6 4.7 68 2-88 10-81 (234)
321 1lc0_A Biliverdin reductase A; 97.0 0.0013 4.3E-08 64.1 7.8 65 2-90 8-77 (294)
322 3qsg_A NAD-binding phosphogluc 97.0 0.0018 6.1E-08 63.6 8.8 108 324-464 24-142 (312)
323 4gwg_A 6-phosphogluconate dehy 97.0 0.0022 7.7E-08 66.7 9.7 118 324-469 4-131 (484)
324 3pdu_A 3-hydroxyisobutyrate de 97.0 0.00089 3E-08 64.8 6.1 109 325-465 2-119 (287)
325 2h78_A Hibadh, 3-hydroxyisobut 97.0 0.0015 5E-08 63.7 7.7 107 325-464 4-120 (302)
326 3hg7_A D-isomer specific 2-hyd 96.9 0.001 3.4E-08 65.7 6.5 101 320-454 136-239 (324)
327 3oet_A Erythronate-4-phosphate 96.9 0.0021 7.1E-08 64.7 8.9 99 319-455 114-220 (381)
328 3dhn_A NAD-dependent epimerase 96.9 0.00035 1.2E-08 64.6 3.0 74 1-89 4-78 (227)
329 2zyd_A 6-phosphogluconate dehy 96.9 0.0024 8.2E-08 66.6 9.5 118 321-467 12-139 (480)
330 3ip3_A Oxidoreductase, putativ 96.9 0.00083 2.8E-08 66.6 5.8 73 1-89 2-78 (337)
331 3qvo_A NMRA family protein; st 96.9 0.0009 3.1E-08 62.6 5.6 74 1-88 23-98 (236)
332 4g65_A TRK system potassium up 96.9 0.001 3.4E-08 69.1 6.4 41 2-44 4-44 (461)
333 3dr3_A N-acetyl-gamma-glutamyl 96.9 0.0012 4.1E-08 65.5 6.7 34 1-35 4-38 (337)
334 1qp8_A Formate dehydrogenase; 96.9 0.0033 1.1E-07 61.4 9.7 94 321-452 121-217 (303)
335 3kb6_A D-lactate dehydrogenase 96.9 0.0033 1.1E-07 62.3 9.6 101 320-456 137-241 (334)
336 3ond_A Adenosylhomocysteinase; 96.9 0.0028 9.6E-08 65.6 9.3 88 2-128 266-353 (488)
337 3dqp_A Oxidoreductase YLBE; al 96.9 0.0011 3.7E-08 61.1 5.7 104 2-127 1-106 (219)
338 4ezb_A Uncharacterized conserv 96.9 0.0038 1.3E-07 61.4 9.9 108 325-464 25-144 (317)
339 3h9u_A Adenosylhomocysteinase; 96.8 0.0082 2.8E-07 61.2 12.4 116 315-466 202-320 (436)
340 2vt3_A REX, redox-sensing tran 96.8 0.00042 1.5E-08 64.3 2.6 69 2-88 86-155 (215)
341 1j4a_A D-LDH, D-lactate dehydr 96.8 0.0039 1.3E-07 61.8 9.8 100 320-454 142-244 (333)
342 3jyo_A Quinate/shikimate dehyd 96.8 0.005 1.7E-07 59.5 10.1 75 2-89 128-205 (283)
343 3l6d_A Putative oxidoreductase 96.8 0.0042 1.4E-07 60.7 9.6 111 322-465 7-125 (306)
344 3dtt_A NADP oxidoreductase; st 96.8 0.0023 7.8E-08 60.5 7.4 99 321-449 16-126 (245)
345 3ngx_A Bifunctional protein fo 96.8 0.005 1.7E-07 58.9 9.6 72 2-128 151-223 (276)
346 3pp8_A Glyoxylate/hydroxypyruv 96.8 0.0029 9.7E-08 62.3 8.1 102 320-455 135-239 (315)
347 1u8f_O GAPDH, glyceraldehyde-3 96.8 0.0059 2E-07 60.5 10.4 42 2-44 4-48 (335)
348 4a7p_A UDP-glucose dehydrogena 96.7 0.0076 2.6E-07 62.1 11.4 110 324-451 8-133 (446)
349 2p4q_A 6-phosphogluconate dehy 96.7 0.0048 1.6E-07 64.6 10.0 114 324-466 10-134 (497)
350 1p9l_A Dihydrodipicolinate red 96.7 0.0057 1.9E-07 57.8 9.4 32 2-34 1-34 (245)
351 1vpd_A Tartronate semialdehyde 96.7 0.0049 1.7E-07 59.7 9.1 108 325-464 6-122 (299)
352 1hdo_A Biliverdin IX beta redu 96.7 0.0027 9.2E-08 57.3 6.7 73 2-88 4-77 (206)
353 1p77_A Shikimate 5-dehydrogena 96.7 0.0023 7.8E-08 61.6 6.4 103 2-136 120-223 (272)
354 3do5_A HOM, homoserine dehydro 96.6 0.0046 1.6E-07 61.1 8.6 118 1-144 2-133 (327)
355 3ggo_A Prephenate dehydrogenas 96.6 0.006 2.1E-07 59.9 9.5 98 323-451 32-132 (314)
356 1npy_A Hypothetical shikimate 96.6 0.011 3.6E-07 56.9 10.8 67 2-90 120-187 (271)
357 1dxy_A D-2-hydroxyisocaproate 96.6 0.0048 1.6E-07 61.2 8.5 99 320-455 141-243 (333)
358 2cuk_A Glycerate dehydrogenase 96.6 0.005 1.7E-07 60.4 8.6 90 320-448 140-230 (311)
359 4ina_A Saccharopine dehydrogen 96.6 0.0038 1.3E-07 63.6 7.9 42 1-44 1-45 (405)
360 1nyt_A Shikimate 5-dehydrogena 96.6 0.004 1.4E-07 59.8 7.7 100 2-133 120-220 (271)
361 1a4i_A Methylenetetrahydrofola 96.6 0.0087 3E-07 57.9 10.0 72 2-128 166-238 (301)
362 3e8x_A Putative NAD-dependent 96.6 0.0031 1.1E-07 58.6 6.5 71 2-88 22-94 (236)
363 1j5p_A Aspartate dehydrogenase 96.6 0.0038 1.3E-07 59.1 7.1 95 2-144 13-111 (253)
364 2dpo_A L-gulonate 3-dehydrogen 96.6 0.0086 2.9E-07 58.9 9.9 120 323-457 5-133 (319)
365 2o4c_A Erythronate-4-phosphate 96.6 0.0041 1.4E-07 62.7 7.7 98 319-454 111-216 (380)
366 2yyy_A Glyceraldehyde-3-phosph 96.5 0.0043 1.5E-07 61.7 7.7 104 2-125 3-111 (343)
367 1oi7_A Succinyl-COA synthetase 96.5 0.036 1.2E-06 53.6 14.1 105 2-145 8-115 (288)
368 4e12_A Diketoreductase; oxidor 96.5 0.011 3.7E-07 57.0 10.4 118 324-456 4-130 (283)
369 3d1l_A Putative NADP oxidoredu 96.5 0.004 1.4E-07 59.3 7.2 102 323-456 9-111 (266)
370 4a26_A Putative C-1-tetrahydro 96.5 0.008 2.8E-07 58.2 9.1 72 2-128 166-240 (300)
371 3o8q_A Shikimate 5-dehydrogena 96.5 0.0027 9.3E-08 61.4 5.8 103 2-137 127-230 (281)
372 1xdw_A NAD+-dependent (R)-2-hy 96.5 0.0061 2.1E-07 60.3 8.5 98 320-454 142-243 (331)
373 1np3_A Ketol-acid reductoisome 96.5 0.0035 1.2E-07 62.3 6.7 93 323-448 15-108 (338)
374 3gg2_A Sugar dehydrogenase, UD 96.5 0.0099 3.4E-07 61.4 10.2 108 325-451 3-126 (450)
375 4hv4_A UDP-N-acetylmuramate--L 96.5 0.014 4.7E-07 61.0 11.4 114 1-145 22-148 (494)
376 3d64_A Adenosylhomocysteinase; 96.5 0.015 5.2E-07 60.4 11.4 101 319-455 272-375 (494)
377 3pwz_A Shikimate dehydrogenase 96.5 0.013 4.6E-07 56.2 10.3 99 2-133 121-221 (272)
378 2duw_A Putative COA-binding pr 96.5 0.0042 1.4E-07 53.8 6.1 108 324-465 13-123 (145)
379 2izz_A Pyrroline-5-carboxylate 96.4 0.012 4E-07 57.9 10.1 100 324-456 22-127 (322)
380 2g5c_A Prephenate dehydrogenas 96.4 0.0097 3.3E-07 57.0 9.2 96 325-451 2-100 (281)
381 1b0a_A Protein (fold bifunctio 96.4 0.011 3.7E-07 56.9 9.3 53 2-89 160-213 (288)
382 1jw9_B Molybdopterin biosynthe 96.4 0.0065 2.2E-07 57.6 7.7 33 2-36 32-65 (249)
383 2iz1_A 6-phosphogluconate dehy 96.4 0.0082 2.8E-07 62.4 9.1 114 324-466 5-128 (474)
384 3gvp_A Adenosylhomocysteinase 96.4 0.035 1.2E-06 56.5 13.2 118 313-466 209-329 (435)
385 3pid_A UDP-glucose 6-dehydroge 96.4 0.011 3.8E-07 60.5 9.7 111 322-451 34-157 (432)
386 3cky_A 2-hydroxymethyl glutara 96.4 0.009 3.1E-07 57.8 8.7 109 324-464 4-121 (301)
387 1v8b_A Adenosylhomocysteinase; 96.4 0.017 5.9E-07 59.7 11.2 103 319-457 252-357 (479)
388 3e48_A Putative nucleoside-dip 96.3 0.0035 1.2E-07 60.1 5.4 74 2-88 1-75 (289)
389 3mtj_A Homoserine dehydrogenas 96.3 0.008 2.7E-07 61.8 8.2 66 3-88 12-88 (444)
390 3p2o_A Bifunctional protein fo 96.3 0.016 5.3E-07 55.8 9.6 71 2-127 161-232 (285)
391 3l07_A Bifunctional protein fo 96.3 0.017 6E-07 55.4 10.0 71 2-127 162-233 (285)
392 2pgd_A 6-phosphogluconate dehy 96.3 0.015 5E-07 60.7 10.3 114 325-466 3-126 (482)
393 4a5o_A Bifunctional protein fo 96.3 0.018 6.1E-07 55.3 9.9 72 2-128 162-234 (286)
394 3e5r_O PP38, glyceraldehyde-3- 96.3 0.017 5.7E-07 57.2 9.9 41 2-43 4-47 (337)
395 2dt5_A AT-rich DNA-binding pro 96.2 0.001 3.5E-08 61.5 1.0 68 2-88 81-150 (211)
396 3m2p_A UDP-N-acetylglucosamine 96.2 0.0073 2.5E-07 58.6 6.9 70 1-88 2-72 (311)
397 3n58_A Adenosylhomocysteinase; 96.2 0.042 1.4E-06 56.1 12.4 103 310-448 233-335 (464)
398 2gf2_A Hibadh, 3-hydroxyisobut 96.2 0.011 3.7E-07 57.1 7.9 94 326-453 2-99 (296)
399 3fbt_A Chorismate mutase and s 96.1 0.0092 3.2E-07 57.6 6.8 66 2-89 123-189 (282)
400 4hb9_A Similarities with proba 96.1 0.0037 1.3E-07 62.7 4.1 33 2-36 2-34 (412)
401 1mv8_A GMD, GDP-mannose 6-dehy 96.1 0.02 6.7E-07 58.9 9.7 108 326-451 2-127 (436)
402 2yv1_A Succinyl-COA ligase [AD 96.0 0.042 1.5E-06 53.3 11.5 104 3-145 15-121 (294)
403 2ahr_A Putative pyrroline carb 96.0 0.023 8E-07 53.6 9.5 96 325-457 4-100 (259)
404 1nvt_A Shikimate 5'-dehydrogen 96.0 0.0068 2.3E-07 58.6 5.7 108 2-133 129-236 (287)
405 3tri_A Pyrroline-5-carboxylate 96.0 0.037 1.3E-06 53.2 10.7 102 324-457 3-108 (280)
406 1ys4_A Aspartate-semialdehyde 96.0 0.0085 2.9E-07 59.9 6.2 31 2-33 9-40 (354)
407 3gt0_A Pyrroline-5-carboxylate 96.0 0.013 4.3E-07 55.3 7.1 100 325-457 3-107 (247)
408 1edz_A 5,10-methylenetetrahydr 95.9 0.0029 1E-07 62.0 2.5 73 2-89 178-256 (320)
409 2f1k_A Prephenate dehydrogenas 95.9 0.021 7.3E-07 54.5 8.6 92 326-449 2-93 (279)
410 2y0c_A BCEC, UDP-glucose dehyd 95.9 0.024 8.2E-07 58.9 9.5 108 324-449 8-130 (478)
411 2f00_A UDP-N-acetylmuramate--L 95.9 0.051 1.7E-06 56.6 12.1 115 1-145 19-145 (491)
412 2ozp_A N-acetyl-gamma-glutamyl 95.9 0.0062 2.1E-07 60.7 4.8 32 2-34 5-37 (345)
413 3b1f_A Putative prephenate deh 95.9 0.013 4.5E-07 56.4 7.0 97 324-451 6-105 (290)
414 3hn7_A UDP-N-acetylmuramate-L- 95.9 0.063 2.2E-06 56.4 12.8 115 1-145 19-148 (524)
415 2yv2_A Succinyl-COA synthetase 95.8 0.15 5.1E-06 49.5 14.4 105 2-145 14-122 (297)
416 2cvz_A Dehydrogenase, 3-hydrox 95.8 0.017 5.7E-07 55.5 7.6 104 326-464 3-113 (289)
417 1p3d_A UDP-N-acetylmuramate--a 95.8 0.052 1.8E-06 56.3 11.9 114 1-145 18-144 (475)
418 1qyc_A Phenylcoumaran benzylic 95.8 0.013 4.3E-07 56.6 6.8 74 1-88 4-87 (308)
419 2uyy_A N-PAC protein; long-cha 95.8 0.014 4.8E-07 57.0 7.1 95 324-450 30-127 (316)
420 3k96_A Glycerol-3-phosphate de 95.8 0.031 1.1E-06 55.8 9.7 110 324-452 29-138 (356)
421 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.8 0.03 1E-06 58.2 10.0 115 326-466 3-128 (478)
422 2jl1_A Triphenylmethane reduct 95.8 0.0062 2.1E-07 58.2 4.4 74 2-87 1-75 (287)
423 1c1d_A L-phenylalanine dehydro 95.8 0.045 1.5E-06 54.5 10.6 35 2-38 176-210 (355)
424 4b4o_A Epimerase family protei 95.8 0.022 7.6E-07 54.8 8.3 33 2-36 1-34 (298)
425 1y1p_A ARII, aldehyde reductas 95.8 0.012 4.1E-07 57.5 6.3 40 2-43 12-52 (342)
426 3g79_A NDP-N-acetyl-D-galactos 95.7 0.11 3.7E-06 53.9 13.7 111 323-451 17-151 (478)
427 3p2y_A Alanine dehydrogenase/p 95.7 0.1 3.4E-06 52.4 12.9 131 322-466 182-329 (381)
428 3c24_A Putative oxidoreductase 95.7 0.015 5.2E-07 55.9 6.9 106 325-464 12-120 (286)
429 3tnl_A Shikimate dehydrogenase 95.7 0.032 1.1E-06 54.7 9.0 74 2-89 155-237 (315)
430 1qyd_A Pinoresinol-lariciresin 95.7 0.014 4.9E-07 56.3 6.6 74 1-88 4-86 (313)
431 2ejw_A HDH, homoserine dehydro 95.7 0.0037 1.3E-07 61.8 2.3 64 2-88 4-76 (332)
432 1vkn_A N-acetyl-gamma-glutamyl 95.7 0.021 7.1E-07 56.8 7.6 94 1-128 13-108 (351)
433 3gpi_A NAD-dependent epimerase 95.7 0.0036 1.2E-07 60.0 2.1 36 1-38 3-38 (286)
434 1xq6_A Unknown protein; struct 95.6 0.013 4.3E-07 54.5 5.7 75 1-88 4-79 (253)
435 1xyg_A Putative N-acetyl-gamma 95.6 0.01 3.5E-07 59.4 5.3 32 2-34 17-49 (359)
436 1a4i_A Methylenetetrahydrofola 95.6 0.073 2.5E-06 51.5 11.0 84 315-449 156-239 (301)
437 2gas_A Isoflavone reductase; N 95.6 0.011 3.8E-07 57.0 5.3 74 1-88 2-86 (307)
438 1yb4_A Tartronic semialdehyde 95.6 0.013 4.6E-07 56.3 5.9 93 325-450 4-99 (295)
439 1lnq_A MTHK channels, potassiu 95.6 0.0025 8.5E-08 63.1 0.6 39 2-44 116-154 (336)
440 2vns_A Metalloreductase steap3 95.6 0.026 8.7E-07 52.0 7.5 95 323-453 27-121 (215)
441 2x4g_A Nucleoside-diphosphate- 95.6 0.0063 2.2E-07 59.6 3.5 73 1-87 13-86 (342)
442 1i36_A Conserved hypothetical 95.6 0.026 9E-07 53.4 7.7 90 326-450 2-91 (264)
443 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.054 1.9E-06 52.5 10.1 119 325-456 16-145 (302)
444 3c1o_A Eugenol synthase; pheny 95.6 0.012 4.1E-07 57.2 5.4 34 1-36 4-38 (321)
445 2c2x_A Methylenetetrahydrofola 95.6 0.045 1.5E-06 52.4 9.1 73 2-127 159-232 (281)
446 1b0a_A Protein (fold bifunctio 95.5 0.076 2.6E-06 51.0 10.5 82 315-447 150-231 (288)
447 3ktd_A Prephenate dehydrogenas 95.4 0.023 7.8E-07 56.4 6.9 93 324-450 8-104 (341)
448 2pv7_A T-protein [includes: ch 95.4 0.033 1.1E-06 54.0 7.8 81 324-450 21-102 (298)
449 2r00_A Aspartate-semialdehyde 95.4 0.0077 2.6E-07 59.7 3.3 33 1-33 3-37 (336)
450 2ep5_A 350AA long hypothetical 95.3 0.0084 2.9E-07 59.8 3.5 31 2-33 5-36 (350)
451 2d5c_A AROE, shikimate 5-dehyd 95.3 0.083 2.8E-06 50.1 10.3 108 320-463 113-226 (263)
452 2fp4_A Succinyl-COA ligase [GD 95.3 0.11 3.7E-06 50.6 11.3 103 3-144 15-121 (305)
453 2x5o_A UDP-N-acetylmuramoylala 95.3 0.049 1.7E-06 55.9 9.2 114 2-145 6-130 (439)
454 3keo_A Redox-sensing transcrip 95.3 0.0042 1.5E-07 57.3 1.0 69 2-88 85-158 (212)
455 3kkj_A Amine oxidase, flavin-c 95.3 0.014 4.6E-07 53.6 4.5 32 3-36 4-35 (336)
456 3p2o_A Bifunctional protein fo 95.3 0.11 3.6E-06 50.0 10.7 80 317-447 153-232 (285)
457 4dio_A NAD(P) transhydrogenase 95.3 0.065 2.2E-06 54.2 9.7 140 321-473 187-347 (405)
458 3fpf_A Mtnas, putative unchara 95.3 0.17 5.7E-06 49.0 12.2 97 2-127 124-222 (298)
459 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.061 2.1E-06 49.9 8.7 33 2-36 32-64 (223)
460 3i6i_A Putative leucoanthocyan 95.2 0.017 5.8E-07 57.0 5.3 73 2-88 11-93 (346)
461 3cps_A Glyceraldehyde 3-phosph 95.2 0.044 1.5E-06 54.5 8.2 32 1-33 17-48 (354)
462 3fr7_A Putative ketol-acid red 95.2 0.037 1.3E-06 57.1 7.7 96 322-450 51-158 (525)
463 3l07_A Bifunctional protein fo 95.1 0.095 3.3E-06 50.3 10.0 82 315-447 152-233 (285)
464 3h2z_A Mannitol-1-phosphate 5- 95.1 0.017 5.8E-07 58.2 5.0 82 2-87 1-88 (382)
465 3cmc_O GAPDH, glyceraldehyde-3 95.1 0.05 1.7E-06 53.7 8.3 42 1-43 1-44 (334)
466 2nqt_A N-acetyl-gamma-glutamyl 95.1 0.019 6.7E-07 57.1 5.4 32 1-33 9-46 (352)
467 3k6j_A Protein F01G10.3, confi 95.1 0.12 4.1E-06 53.2 11.2 117 323-456 53-175 (460)
468 3hm2_A Precorrin-6Y C5,15-meth 95.0 0.22 7.6E-06 43.3 11.6 114 2-145 27-144 (178)
469 4dpl_A Malonyl-COA/succinyl-CO 95.0 0.008 2.7E-07 60.1 2.3 31 2-33 8-39 (359)
470 4dpk_A Malonyl-COA/succinyl-CO 95.0 0.008 2.7E-07 60.1 2.3 31 2-33 8-39 (359)
471 1orr_A CDP-tyvelose-2-epimeras 95.0 0.084 2.9E-06 51.5 9.7 33 1-35 1-34 (347)
472 2r6j_A Eugenol synthase 1; phe 95.0 0.02 7E-07 55.5 5.1 71 3-87 13-88 (318)
473 3ce6_A Adenosylhomocysteinase; 95.0 0.19 6.6E-06 52.2 12.6 100 321-456 271-373 (494)
474 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.034 1.2E-06 47.5 5.8 90 324-448 21-111 (144)
475 3c8m_A Homoserine dehydrogenas 95.0 0.022 7.5E-07 56.3 5.1 78 2-89 7-97 (331)
476 2hk9_A Shikimate dehydrogenase 94.9 0.064 2.2E-06 51.4 8.3 109 321-462 126-238 (275)
477 4a26_A Putative C-1-tetrahydro 94.9 0.12 4.3E-06 49.8 10.2 82 316-448 157-240 (300)
478 2zcu_A Uncharacterized oxidore 94.9 0.023 7.9E-07 54.0 5.1 73 3-87 1-74 (286)
479 2g1u_A Hypothetical protein TM 94.9 0.1 3.5E-06 45.0 8.8 115 321-461 16-133 (155)
480 3t4e_A Quinate/shikimate dehyd 94.9 0.099 3.4E-06 51.1 9.6 75 2-90 149-232 (312)
481 2wm3_A NMRA-like family domain 94.9 0.025 8.6E-07 54.4 5.3 72 2-87 6-81 (299)
482 1gad_O D-glyceraldehyde-3-phos 94.9 0.083 2.8E-06 52.0 9.0 41 1-42 1-43 (330)
483 3oh8_A Nucleoside-diphosphate 94.8 0.026 8.7E-07 59.2 5.6 36 1-38 147-183 (516)
484 1iuk_A Hypothetical protein TT 94.8 0.14 4.6E-06 43.8 9.3 108 323-464 12-122 (140)
485 4a5o_A Bifunctional protein fo 94.8 0.17 5.7E-06 48.6 10.7 82 315-447 152-233 (286)
486 2ywl_A Thioredoxin reductase r 94.8 0.023 8E-07 50.2 4.5 34 1-36 1-34 (180)
487 1hdg_O Holo-D-glyceraldehyde-3 94.7 0.11 3.7E-06 51.2 9.5 42 2-43 1-45 (332)
488 2x5j_O E4PDH, D-erythrose-4-ph 94.7 0.14 4.8E-06 50.6 10.3 41 2-43 3-48 (339)
489 2o3j_A UDP-glucose 6-dehydroge 94.7 0.068 2.3E-06 55.5 8.4 108 325-450 10-138 (481)
490 3st7_A Capsular polysaccharide 94.7 0.12 4E-06 51.3 9.9 32 2-35 1-34 (369)
491 1x13_A NAD(P) transhydrogenase 94.7 0.095 3.2E-06 53.1 9.2 130 322-466 170-320 (401)
492 3e05_A Precorrin-6Y C5,15-meth 94.7 0.44 1.5E-05 42.6 12.9 114 2-145 42-159 (204)
493 1zej_A HBD-9, 3-hydroxyacyl-CO 94.7 0.1 3.4E-06 50.6 8.9 105 323-456 11-116 (293)
494 1txg_A Glycerol-3-phosphate de 94.6 0.065 2.2E-06 52.4 7.7 104 326-450 2-107 (335)
495 1yqg_A Pyrroline-5-carboxylate 94.6 0.085 2.9E-06 49.7 8.2 95 326-457 2-98 (263)
496 3ngx_A Bifunctional protein fo 94.6 0.24 8E-06 47.3 11.1 76 322-448 148-223 (276)
497 3ing_A Homoserine dehydrogenas 94.6 0.088 3E-06 51.8 8.4 35 2-36 5-45 (325)
498 2q3e_A UDP-glucose 6-dehydroge 94.6 0.067 2.3E-06 55.4 8.0 109 325-451 6-135 (467)
499 3qj4_A Renalase; FAD/NAD(P)-bi 94.6 0.023 7.7E-07 55.9 4.2 34 1-36 1-37 (342)
500 2c5a_A GDP-mannose-3', 5'-epim 94.6 0.015 5E-07 58.3 2.8 35 1-37 29-64 (379)
No 1
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=100.00 E-value=3.1e-94 Score=741.59 Aligned_cols=418 Identities=34% Similarity=0.546 Sum_probs=384.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|.+|+|||+||||+++|..|+++ ||+|+|+|+|+++++.|++|+.|++||++++++.+ +..+++++|+++++++++|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 56899999999999999999998 99999999999999999999999999999999875 5678999999999999999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCC---CCCEEEEecCCccchHHHH-HHHHHhcCCCCceeEeeC
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSN---SNKIVVEKSTVPVKTAEAI-EKILTHNSREIKYQILSN 155 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~---~~~iVi~~STv~~gt~~~l-~~~l~~~~~g~~~~v~~~ 155 (480)
|++|||||||.+.++ .+|+++++++.+.|+++++ ++++||++||++|||++++ .+++++.+++.+|.++|+
T Consensus 99 d~~~I~VpTP~~~d~-----~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~ 173 (444)
T 3vtf_A 99 DATFIAVGTPPAPDG-----SADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASN 173 (444)
T ss_dssp SEEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEEC
T ss_pred CceEEEecCCCCCCC-----CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecC
Confidence 999999999988754 8999999999999999885 5789999999999999985 566776655789999999
Q ss_pred CccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHH
Q 011654 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|||+.||++++++.+|+|||+|+. ++++.+.+.++|+.+. .+++++++++||++|+++|+|++++|+|+||++.
T Consensus 174 PErl~eG~a~~d~~~~~riViG~~----~~~a~~~~~~ly~~~~--~~~~~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ 247 (444)
T 3vtf_A 174 PEFLREGSALEDFFKPDRIVIGAG----DERAASFLLDVYKAVD--APKLVMKPREAELVKYASNVFLALKISFANEVGL 247 (444)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHTTTSC--SCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccccCCcEEEcCC----CHHHHHHHHHHHhccC--CCEEEechhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999986 5788999999999874 4677889999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHH
Q 011654 236 LCEATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIV 315 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++|++++++++|+|+++++||+||||||||||+++|.+.|+++|++ .+++++++++|++||+++++++.
T Consensus 248 ice~~GiDv~eV~~a~~~d~rig~~~l~PG~G~GG~CipkD~~~L~~~a~~~g~~--~~li~a~~~iN~~~~~~vv~~l~ 325 (444)
T 3vtf_A 248 LAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGGSCFPKDTLAFIRFGESLGLE--MAISKAVLRVNEYMPRYAVQLLE 325 (444)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTSCSTTCCCSSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHhccCCCCCCCCCCCCCCCCCcccCcCHHHHHHHHHhcCCC--HHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 78999999999999999999998
Q ss_pred HHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC
Q 011654 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+ +.++++||+|||+|||+||+|+||||++.|++.|.++|++|.+|||++.++.. ..++
T Consensus 326 ~~~-~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~-~~~~------------------ 385 (444)
T 3vtf_A 326 ERL-GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKAR-AVLG------------------ 385 (444)
T ss_dssp HHH-TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHH-HHHG------------------
T ss_pred HHc-cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHH-HhcC------------------
Confidence 876 57899999999999999999999999999999999999999999999965443 2232
Q ss_pred CCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecC
Q 011654 396 ASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGK 467 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~ 467 (480)
..+++++++++++++||+|||+|+|++|+++|| +.+ +|||+||++++++ .+.|.|||+
T Consensus 386 --~~~~~~~~~~~a~~~aDavvi~t~h~ef~~ld~-------~~~-vv~D~Rni~~~~~----~~~y~gigW 443 (444)
T 3vtf_A 386 --DSVTYVEDPQALLDQVEGVIIATAWPQYEGLDY-------RGK-VVVDGRYVKKARE----AKIYEGVAW 443 (444)
T ss_dssp --GGSEECSCHHHHHHHCSEEEECSCCGGGGGSCC-------TTC-EEEESSCCGGGGG----SSEEEESSC
T ss_pred --CCceecCCHHHHHhCCCEEEEccCCHHHhCCCc-------CCC-EEEECCCCCChhh----hcceeeeec
Confidence 347788999999999999999999999999986 345 9999999999764 458999996
No 2
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=1.5e-92 Score=735.71 Aligned_cols=433 Identities=37% Similarity=0.622 Sum_probs=396.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
.+|+|||+||||++||.+|+++ ||+|++||+++++++.++++++|++||++++++.+ ...+++++|+|+++++++||
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 4799999999999999999998 99999999999999999999999999999998865 35678999999999899999
Q ss_pred EEEEeccCCCCc-CCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 81 IVFVSVNTPTKT-QGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~-~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||||.+. ++ .+|++++++++++|.++++++++||++||++|||++++.+.+++.+.+.+|.++++|||+
T Consensus 87 vvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a 161 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFL 161 (446)
T ss_dssp EEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCC
T ss_pred EEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccc
Confidence 999999999754 33 899999999999999999999999999999999999998888776544689999999999
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCC--eEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPED--RIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~--~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
.+|.+++++.+|++||+|+. ++++.+.++++|+.+.+.. +++.+++++||++|+++|++++++|+++||++.+|
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~----~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTE----DEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECS----CHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCC----cHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 4789999999999986422 47788999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||+|+++++||+||||+|+|||++++.+.|++.|++ .+++++++++|++||.++++++.+.
T Consensus 238 ~~~GiD~~~v~~~~~~~~rig~~~l~pg~G~gg~c~~KD~~~l~~~A~~~g~~--~~l~~~~~~iN~~~~~~~~~~i~~~ 315 (446)
T 4a7p_A 238 EQVGADVQEVSRGIGMDNRIGGKFLHAGPGYGGSCFPKDTLALMKTAADNETP--LRIVEATVQVNDARKRAMGRKVIKA 315 (446)
T ss_dssp HHTTCCHHHHHHHHHTSTTC---CCCCCSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHhcCCCCCCccCCCCCCcchhhHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred hcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCC
Q 011654 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPAS 397 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+++.++++||+|||+|||+||+|+||||++.|++.|+++|++|.+|||++.++. ... +
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~---------------------~ 373 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQA-SKM---------------------L 373 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHH-GGG---------------------C
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhH-HHh---------------------c
Confidence 988899999999999999999999999999999999999999999999996432 221 1
Q ss_pred CceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCC
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGKPLD 470 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~ 470 (480)
+++.+++++++++++||+|||+|+|++|+++||+.+.+.|+.| +|||+||+++++++++.||.|+||||+.+
T Consensus 374 ~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~iG~~~~ 445 (446)
T 4a7p_A 374 TDVEFVENPYAAADGADALVIVTEWDAFRALDLTRIKNSLKSP-VLVDLRNIYPPAELERAGLQYTGVGKPSR 445 (446)
T ss_dssp SSCCBCSCHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSC-BEECSSCCSCHHHHHHTTCBCCCSSCC--
T ss_pred CCceEecChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCC-EEEECCCCCCHHHHHhcCCEEEEecCCCC
Confidence 3467788999999999999999999999999999999999887 89999999999999999999999999743
No 3
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.5e-88 Score=707.49 Aligned_cols=432 Identities=36% Similarity=0.621 Sum_probs=392.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ |++|++||+++++++.++++..+++|+++++++.+ ...+++++++|+++++++||
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 7999999999999999999998 99999999999999999999999999999988753 33578999999999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCC----CCceeEeeCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSR----EIKYQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~----g~~~~v~~~P 156 (480)
+||+|||||.+.++ .+|++++++++++|.++++++++||++||++|+|++++.+.+++... +.+|.++++|
T Consensus 81 vViiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~P 155 (450)
T 3gg2_A 81 IIFIAVGTPAGEDG-----SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNP 155 (450)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEcCCCcccCC-----CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEech
Confidence 99999999986643 89999999999999999999999999999999999999888776431 3679999999
Q ss_pred ccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCC-CeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHH
Q 011654 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPE-DRIITTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|++.+|.+.+++.+|+++++|+. ++++.+.++++|+.+.+. .+++.+++++||++|+++|++++++++++||++.
T Consensus 156 e~a~eG~~~~~~~~p~~ivvG~~----~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 156 EFLKEGNAIDDFMKPDRVVVGVD----SDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhccCCCEEEEEcC----CHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 488999999999988642 2577899999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHH
Q 011654 236 LCEATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIV 315 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++|+++++++||+++++++||+||||+|+|||++++.+.|+++|++ .+++++++++|+.||.++++++.
T Consensus 232 l~~~~Gid~~~v~~~~~~~~rig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~--~~l~~~~~~iN~~~~~~~~~~~~ 309 (450)
T 3gg2_A 232 LCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYR--MEVLEAVERVNEKQKSILFDKFS 309 (450)
T ss_dssp HHHHHTCCHHHHHHHHHTSTTTCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHcCCCCCCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC
Q 011654 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+++.++++||+|||+|||+||+|+||||++.|++.|+++|++|.+|||++.++. ...++
T Consensus 310 ~~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~------------------ 370 (450)
T 3gg2_A 310 TYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEA-QKRLG------------------ 370 (450)
T ss_dssp HHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHG------------------
T ss_pred HHhcccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHH-HHhcC------------------
Confidence 99987899999999999999999999999999999999999999999999997532 22232
Q ss_pred CCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCC
Q 011654 396 ASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGKPLD 470 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~ 470 (480)
..+.+++++++++++||+|||+|+|++|+++||+.+.+.|+.| +|||+||+++++ ++.||.|+||||++.
T Consensus 371 --~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~--~~~g~~y~~ig~~~~ 440 (450)
T 3gg2_A 371 --DKVEYTTDMYDAVRGAEALFHVTEWKEFRMPDWSALSQAMAAS-LVIDGRNVYELP--ADSDFTLLNIGNSAI 440 (450)
T ss_dssp --GGSEECSSHHHHTTTCSCEEECSCCGGGSSCCHHHHHHHSSSC-EEEESSCCCCCC------CEEEECC----
T ss_pred --ccceecCCHHHHhcCCCEEEEccCCHHHhhcCHHHHHHhcCCC-EEEECCCCCChH--HhCCCEEEEeccccc
Confidence 2367888999999999999999999999999999999999987 899999999988 789999999999764
No 4
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=2.3e-88 Score=707.86 Aligned_cols=434 Identities=25% Similarity=0.388 Sum_probs=391.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHH----HHHHHHCCCCCC--CCCChHHHHHh-hcCCCEEEecCH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVS----RIAAWNGDQLPI--YEPGLEDVVTQ-CRGRNLFFSTDI 72 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~----~v~~l~~~~~~~--~e~~l~~l~~~-~~~~~l~~t~d~ 72 (480)
||||+|||+|+||+++|..|+++ +|| +|++||++++ +++.++++..++ +|+++++++.+ ...+++++|++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 58999999999999999999986 479 9999999999 999999999999 89999988764 33578999999
Q ss_pred HHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHH-HHHh-cCC--CC
Q 011654 73 EKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEK-ILTH-NSR--EI 148 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~-~l~~-~~~--g~ 148 (480)
.+++++||+||+|||||.+.++ ...+|+++++++.++|.++++++++||++||++|||++++.+ ++++ .+. +.
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~---~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~ 172 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPK---DLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGE 172 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSC---CSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTT
T ss_pred HHHHhcCCEEEEecCCchhccC---CccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCC
Confidence 5679999999999999986533 112899999999999999999999999999999999999875 5633 332 46
Q ss_pred ceeEeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhcc-CCCCeEEeCChhHHHHhhhHHhHHHHHHH
Q 011654 149 KYQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHW-VPEDRIITTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
+|.++++|||+.+|.+..++.+|++||+|++ ++..++++++|+.+ .. .+++.+++++||++|+++|++++++|
T Consensus 173 d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~-----~~~~~~~~~ly~~~~~~-~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 173 DFALAHAPERVMVGRLLKNIREHDRIVGGID-----EASTKRAVELYSPVLTV-GQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp TBEEEECCCCCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHGGGCSS-CCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeCCccCCccchhhhhcCCcEEEEeCC-----HHHHHHHHHHHhhhccC-CeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999989999987764 77889999999998 53 57888999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCCC--CCCCccccCCCCCcccchhhhHHHHHHHHHHcCCc----h-hhhHHHHHH
Q 011654 228 SSVNAMSALCEATGADVTQVSHAIGKDT--RIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLT----E-VANYWKQVI 300 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v~~~~~~~~--~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~----~-~~~~~~~~~ 300 (480)
+++||++.+|+++|+|+++|+++++++| |++.++++||+||||+|+|||++++.+.|++.|++ + ..+++++++
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~~~ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~ 326 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLAR 326 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSCCSSSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCchhhhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccchhHHHHHHH
Confidence 9999999999999999999999999999 88899999999999999999999999999999965 1 258999999
Q ss_pred HHHHHhHHHHHHHHHHHhcC---cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhh
Q 011654 301 KVNDYQKNRFVNRIVSSMFN---TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLS 377 (480)
Q Consensus 301 ~~N~~~~~~~~~~~~~~l~~---~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~ 377 (480)
++|+.||.++++++.+.+.+ .++++||+|||+|||+||+|+||||++.|++.|+++|++|.+|||++.. +
T Consensus 327 ~iN~~~~~~~~~~i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~------~- 399 (478)
T 3g79_A 327 KVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN------Y- 399 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC------B-
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc------c-
Confidence 99999999999999988743 6899999999999999999999999999999999999999999999972 1
Q ss_pred ccccCCCCCCCCCCCCCCCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcC--CCCEEEEcCCCCChHHH
Q 011654 378 MKKFDWDHPIHLQPMSPPASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMR--KPAYIFDGRNILDVEKL 455 (480)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~--~~~~i~D~~~~~~~~~~ 455 (480)
+.+.++.++++++++||+||++|+|++|+++||+.+.+.|+ .| +|||+||+++++++
T Consensus 400 --------------------~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~-~i~D~rn~~~~~~~ 458 (478)
T 3g79_A 400 --------------------PGVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANP-VIIDGRNVIEPDEF 458 (478)
T ss_dssp --------------------TTBCEESCHHHHHTTCSEEEECSCCHHHHSCCHHHHHHHHCCSSC-EEEESSSCSCHHHH
T ss_pred --------------------cCcceecCHHHHHhcCCEEEEecCCHHHHhhhHHHHHHHhccCCC-EEEECCCCCCHHHH
Confidence 12456789999999999999999999999999999999998 55 99999999999999
Q ss_pred hhcCcEEEEecCCCCcCc
Q 011654 456 REIGFIVYSIGKPLDPWH 473 (480)
Q Consensus 456 ~~~g~~y~~iG~~~~~~~ 473 (480)
++.||.|+||||....-|
T Consensus 459 ~~~g~~y~~ig~~~~~~~ 476 (478)
T 3g79_A 459 IGKGFVYKGIGREGHHHH 476 (478)
T ss_dssp HTTTCEEEETTCTTTTTC
T ss_pred HhcCCEEEEecccCcccC
Confidence 999999999999665444
No 5
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=100.00 E-value=8.4e-88 Score=695.23 Aligned_cols=410 Identities=27% Similarity=0.418 Sum_probs=364.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
.|..|||+||||++||.+|+++ ||+|++||+|+++++.|++++.|++||++++++.+ ...+++++|+|+ ++||
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~----~~aD 85 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTP----EASD 85 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSC----CCCS
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCch----hhCC
Confidence 4789999999999999999998 99999999999999999999999999999999865 446889999983 5799
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHH-HHhcCC--CCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKI-LTHNSR--EIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~-l~~~~~--g~~~~v~~~Pe 157 (480)
+||+|||||.+.+. ...+|+++++++.++|.++++++++||++||++|||++++.+. +++.+. +.+|.++++||
T Consensus 86 vvii~VpTp~~~~~---~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 86 VFIIAVPTPNNDDQ---YRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp EEEECCCCCBCSSS---SCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred EEEEEeCCCccccc---cCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 99999999986530 1389999999999999999999999999999999999998665 453332 57899999999
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
|+.+|.+..++.+|++||+|++ +++.++++++|+.+.+ ..++.+++++||++|+++|+|++++|+++||++.+|
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~-----~~~~~~~~~ly~~~~~-~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~ 236 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVT-----KACIEAGKRVYRTFVQ-GEMIETDARTAEMSKLMENTYRDVNIALANELTKIC 236 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHTTTCC-SCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCC-----HHHHHHHHHHHHHHhC-CcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987764 7899999999999874 467789999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||+ ++++||+||||||||||+++|.+.|++.| +++++++++|+.||.++++++.+.
T Consensus 237 e~~GiD~~~v~~~~~~~~ri--~~l~pG~G~GG~C~pkD~~~L~~~a~~~~-----~li~~~~~iN~~~~~~v~~~~~~~ 309 (431)
T 3ojo_A 237 NNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPENA-----KLIQTGREINNSMPAYVVDTTKQI 309 (431)
T ss_dssp HHTTCCHHHHHHHHTTSTTC--CCCCCCSCCCCCCBCSCC---------CC-----HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHccCCCc--ccCCCCCCccccchhhhHHHHHHHHHHHh-----HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999987 68999999999999999999999999876 789999999999999999999988
Q ss_pred hcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhC-CCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCC
Q 011654 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGD-KAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPA 396 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~-g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+ +.++++||+|||+|||+||+|+||||++.|++.|+++ |++|.+|||++..+
T Consensus 310 l-~~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~-------------------------- 362 (431)
T 3ojo_A 310 I-KALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-------------------------- 362 (431)
T ss_dssp H-HHSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT--------------------------
T ss_pred h-hhcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc--------------------------
Confidence 7 4689999999999999999999999999999999999 99999999999752
Q ss_pred CCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCC
Q 011654 397 SKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGKPL 469 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~ 469 (480)
.+..++++++++||+|||+|+|++|+++||+.+ +.|+.+ +|||+||++++ +..||.|++|||-.
T Consensus 363 ----~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~-~~~~~~-~i~D~r~~~~~---~~~~~~y~~ig~~~ 426 (431)
T 3ojo_A 363 ----FVEHDMSHAVKDASLVLILSDHSEFKNLSDSHF-DKMKHK-VIFDTKNVVKS---SFEDVLYYNYGNIF 426 (431)
T ss_dssp ----TBCSTTHHHHTTCSEEEECSCCGGGTSCCGGGG-TTCSSC-EEEESSCCCCS---CCSSSEEEETTTGG
T ss_pred ----cccCCHHHHHhCCCEEEEecCCHHHhccCHHHH-HhCCCC-EEEECCCCCCc---hhcCeEEEeeCchh
Confidence 124578999999999999999999999999998 788876 99999999975 46899999999864
No 6
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=100.00 E-value=1.4e-85 Score=693.39 Aligned_cols=462 Identities=58% Similarity=0.996 Sum_probs=405.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|+++++|++|++||+++++++.++++..+++++++++++.....+++++++++.+++++||
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 47999999999999999999987557999999999999999999999999999988876433457999999988899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHh-cC--CCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTH-NS--REIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~-~~--~g~~~~v~~~Pe 157 (480)
+||+|||||.+.++.+.+..+|++++++++++|.++++++++||++||++||+++.+.+.+++ .+ .+.+|.++++||
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe 168 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPE 168 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcc
Confidence 999999999754322223478999999999999999999999999999999999999988887 43 146788999999
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
++.+|.+.+++.+++++++|+.++.+++++.+.++++|+.+.....++.++++++|++|+++|++++++++++||++.+|
T Consensus 169 ~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la 248 (481)
T 2o3j_A 169 FLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVC 248 (481)
T ss_dssp CCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889899999874433346888999999998631467888999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++++++++++||++.+++.||+||||+|+|||++++.+.|++.|+++.++++++++++|++||.++++++.+.
T Consensus 249 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~~~~~l~~~~~~~N~~~~~~~~~~~~~~ 328 (481)
T 2o3j_A 249 EATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAE 328 (481)
T ss_dssp HHHSCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHccCCCCCCCCCCCCCccCCccHHHHHHHHHHHHHHcCCCccchHHHHHHHHHHhhHHHHHHHHHHh
Confidence 99999999999999999999888999999999999999999999999999998767899999999999999999999999
Q ss_pred hcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCC
Q 011654 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPAS 397 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+++.+++++|+|||+|||+||+|+||||++.|++.|.++|++|.+|||+++.++...++.. .+..++ ..
T Consensus 329 l~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~--~~~~~~---------~~ 397 (481)
T 2o3j_A 329 LFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLAS--VTSAQD---------VE 397 (481)
T ss_dssp TTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHH--HSCHHH---------HH
T ss_pred hccccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHh--hhcccc---------cc
Confidence 8777899999999999999999999999999999999999999999999986543222210 000000 00
Q ss_pred CceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCCcCc
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGKPLDPWH 473 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~~~~ 473 (480)
+.+++++++++++++||+|||+|+|++|+++||+++.+.|+.+.+|||+||+++++++++.||.|+||||+.++=|
T Consensus 398 ~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~g~~~~~iG~~~~~~~ 473 (481)
T 2o3j_A 398 RLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREIGFRTFAIGTSPDQAY 473 (481)
T ss_dssp HHEEEESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSCSCHHHHHHHTCEEEETTSCSCC--
T ss_pred CceeecCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCCCCHHHHHhcCcEEEEecCcccccC
Confidence 1356778999999999999999999999999999999999988789999999999999999999999999877654
No 7
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=100.00 E-value=1.8e-82 Score=668.36 Aligned_cols=459 Identities=64% Similarity=1.045 Sum_probs=402.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|+++++|++|++||+++++++.++++..+++++++++++......++++++++++++++||
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 57999999999999999999987457999999999999999999999999999988875433356899999988899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCC-CCceeEeeCCccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSR-EIKYQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~-g~~~~v~~~Pe~~ 159 (480)
+||+|||+|.+.++...+..+|++++.++++++.++++++++||++||++|++++.+.+.+++.+. +.++.+.++|+++
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~ 164 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFL 164 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHh
Confidence 999999999764221111368999999999999999999999999999999999999888887543 5678999999999
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHHH
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEA 239 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~ 239 (480)
.+|.+.+++.+++++++|+..+..++++.+.++++|+.+....+++.+++++||++|+++|++++++++++||++.+|++
T Consensus 165 ~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~ 244 (467)
T 2q3e_A 165 AEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEA 244 (467)
T ss_dssp CTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999983222257889999999999832246888999999999999999999999999999999999
Q ss_pred hCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 011654 240 TGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSSMF 319 (480)
Q Consensus 240 ~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~ 319 (480)
+|+|++++++++++++++++.+++||+||||+|+|||++++++.|++.|+++..++++++.++|++|+.++++++.+.+.
T Consensus 245 ~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 324 (467)
T 2q3e_A 245 TGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLF 324 (467)
T ss_dssp HTCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCcCHHHHHHHHcCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 99999999999999999888899999999999999999999999999999877789999999999999999999999876
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
+.++++||+|||+|||+||+|+||||++.|++.|.++|++|.+|||++..++....+. ++..+.| ....++
T Consensus 325 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~-------~~~~~~~--~~~~~~ 395 (467)
T 2q3e_A 325 NTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLS-------HPGVSED--DQVSRL 395 (467)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHC-------C--------CHHHHH
T ss_pred cccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhc-------ccccccc--ccccCc
Confidence 6789999999999999999999999999999999999999999999998776544321 0000000 000125
Q ss_pred eeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCCh--HHHhhcCcEEEEecCC
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDV--EKLREIGFIVYSIGKP 468 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~--~~~~~~g~~y~~iG~~ 468 (480)
+.+++++++++++||+|||+|+|++|+++||+++...|+.|.+|||+||++++ ++++..||.|+||||+
T Consensus 396 ~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~~~g~~~~~ig~~ 466 (467)
T 2q3e_A 396 VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKK 466 (467)
T ss_dssp EEECSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCTTTTCHHHHHHHTCEEEETTSC
T ss_pred eeecCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCcCCchHHHHHhcCcEEEEeCCC
Confidence 77888999999999999999999999999999999999988669999999998 8999999999999985
No 8
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=100.00 E-value=4.6e-83 Score=672.54 Aligned_cols=451 Identities=37% Similarity=0.595 Sum_probs=400.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.+++++.+++++++++++.+ ...+++++++|+++++++||
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred ceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 8999999999999999999998 99999999999999999999999999999887653 33567999999988899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC-CC---CceeEeeCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS-RE---IKYQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~-~g---~~~~v~~~P 156 (480)
+||+|||||.+.++ .+|++++++++++|.++++++++||++||++||+++.+.+.+++.. .+ .+|.++++|
T Consensus 87 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~P 161 (478)
T 2y0c_A 87 VQFIAVGTPPDEDG-----SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNP 161 (478)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEeCCCcccCC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEECh
Confidence 99999999987644 8999999999999999999999999999999999999888877641 12 578999999
Q ss_pred ccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCC-CCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHH
Q 011654 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVP-EDRIITTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~-~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|++.||.+.+++..|+++++|+.++....++.+.++++|+.+.+ ...++.+++++||+.|+++|++++++++++||++.
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~ 241 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELAN 241 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889999998875210001788999999998752 24678889999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHH
Q 011654 236 LCEATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIV 315 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++++++++.++|++..+++||+|+||+|++||+.++.+.|+++|++ .++++++.++|+.||.++++++.
T Consensus 242 la~~~Gid~~~v~~~i~~~~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~--~pl~~~v~~in~~~~~~~~~~~~ 319 (478)
T 2y0c_A 242 LADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQS--LQILKAVSSVNATQKRVLADKIV 319 (478)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHhcCCccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999888899999999999999999999999999999 89999999999999999999999
Q ss_pred HHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC
Q 011654 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+++.+++++|+|||||||+||+|+||||++.|++.|+++|++|.+|||++.++ ....|+. -.|+.| |
T Consensus 320 ~~~~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~~~--~~~~~~--~------ 388 (478)
T 2y0c_A 320 ARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEE-ARRVIAL--DLADHP--S------ 388 (478)
T ss_dssp HHHCSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHH-HHHHHHH--HTTTCH--H------
T ss_pred HHhcccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHH-HHHhhcc--cccccc--c------
Confidence 9987788999999999999999999999999999999999999999999998653 2222210 001111 1
Q ss_pred CCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecCCCCcCc
Q 011654 396 ASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGKPLDPWH 473 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~~~~~~~ 473 (480)
..+.+.+++++++++++||+|||+|+|++|+++||+.+.+.|+.+ +|||+||+++++.+++.||.|+||||+...|.
T Consensus 389 ~~~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~ig~~~~~~~ 465 (478)
T 2y0c_A 389 WLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTP-VIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 465 (478)
T ss_dssp HHTTEEECSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSSC-EEEESSCCSCHHHHHHTTCEEECSSSCCCHHH
T ss_pred cccceeecCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCCC-EEEECCCCCCHHHHHhcCCEEEEECcccchhH
Confidence 012467888999999999999999999999999999999999886 99999999999999999999999999877764
No 9
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=100.00 E-value=1.6e-76 Score=610.04 Aligned_cols=387 Identities=25% Similarity=0.375 Sum_probs=332.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|++ |++|++||+++++++.++++..+++|+++++++... .+++++++|+++++++||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~-~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK-PLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS-CCCEEEESCHHHHHTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc-cCCeEEEcCHHHHHhCCC
Confidence 5899999999999999999985 799999999999999999999999999999887642 357999999999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||++.+.+ +..+|++++++++++|.+ ++++++||++||++|||++++.+.+.+ ..++++|||++
T Consensus 112 vViiaVPt~~~~~----~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~------~~v~~sPe~~~ 180 (432)
T 3pid_A 112 YVIIATPTDYDPK----TNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGI------DNVIFSPEFLR 180 (432)
T ss_dssp EEEECCCCEEETT----TTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTC------CCEEECCCCCC
T ss_pred EEEEeCCCccccc----cccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhh------ccEeecCccCC
Confidence 9999999986542 236899999999999999 999999999999999999999887754 25789999999
Q ss_pred ccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhc--cCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 161 EGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAH--WVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~--~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
||.+..++++|++||+|+. ++..+++.++|.. +..+.+++.+++++||++||++|++++++|+++||++.+|+
T Consensus 181 ~G~A~~~~l~p~rIvvG~~-----~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae 255 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGER-----SARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAE 255 (432)
T ss_dssp TTSHHHHHHSCSCEEESSC-----SHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcccCCceEEecCC-----HHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886 4577888898876 32223577899999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 011654 239 ATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSSM 318 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l 318 (480)
++|+|+++|+++++++||||..|++||+||||||||||+++|... ..|++ .+++++++++|++||.++++++.+.
T Consensus 256 ~~GiD~~~v~~~~~~dprig~~~~~pg~G~GG~C~pkD~~~L~~~--~~~~~--~~li~~~~~~N~~~~~~v~~~i~~~- 330 (432)
T 3pid_A 256 SQGLNSKQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLAN--YESVP--NNIIAAIVDANRTRKDFIADSILAR- 330 (432)
T ss_dssp HTTCCHHHHHHHHHTSTTTCSSSCCCCSCCCTTTHHHHHHHHHHH--TTTSC--CSHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HcCCCHHHHHHHHccCCCCCcccCCCCCCCcccchhhhHHHHHHH--hcCCc--hhHHHHHHHHHHhhHHHHHHHHHhh-
Confidence 999999999999999999999999999999999999999999754 45777 6899999999999999999999875
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
.+++|+|||||||+||+|+|+||++.|++.|+++|++|.+|||+++.+.. .
T Consensus 331 ----~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~~-------------------------~ 381 (432)
T 3pid_A 331 ----KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDEF-------------------------F 381 (432)
T ss_dssp ----CCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSEE-------------------------T
T ss_pred ----cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhhc-------------------------C
Confidence 37899999999999999999999999999999999999999999974321 2
Q ss_pred ceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE 453 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~ 453 (480)
+..+.+++++++++||+||+.+.|++|+++. +. +++|++|..+
T Consensus 382 ~~~~~~~~~~~~~~aD~iv~~~~~~~~~~~~-----~~-------~~tr~~~~~~ 424 (432)
T 3pid_A 382 NSRVVRDLNAFKQEADVIISNRMAEELADVA-----DK-------VYTRDLFGND 424 (432)
T ss_dssp TEEECCCHHHHHHHCSEEECSSCCGGGGGGG-----GG-------EECCCSSTTC
T ss_pred CceEECCHHHHHhcCCEEEECCCChHHHHHh-----hc-------cCCCCCCCCc
Confidence 3567889999999999999999999987632 21 4999999754
No 10
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=100.00 E-value=3.3e-75 Score=608.53 Aligned_cols=423 Identities=26% Similarity=0.394 Sum_probs=370.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ |++|++||+++++++.++++..+++++++++++.. ...+++++++++++++++||
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 7999999999999999999998 99999999999999999999999999999988753 22467999999998899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCC---CCEEEEecCCccch-HHHHHHHHHhc-CC--CCceeEe
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNS---NKIVVEKSTVPVKT-AEAIEKILTHN-SR--EIKYQIL 153 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~---~~iVi~~STv~~gt-~~~l~~~l~~~-~~--g~~~~v~ 153 (480)
+||+|||+|.+.++ .+|+++++++++++.+++++ +++||++||+++|+ .+.+.+.+++. +. +.++.+.
T Consensus 79 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~ 153 (436)
T 1mv8_A 79 VSFICVGTPSKKNG-----DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVG 153 (436)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEE
T ss_pred EEEEEcCCCcccCC-----CcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEE
Confidence 99999999986543 89999999999999999998 99999999999999 66788888764 32 3578899
Q ss_pred eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHH
Q 011654 154 SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAM 233 (480)
Q Consensus 154 ~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (480)
++|+++.+|.+..++.+++++++|+. ++++.+.++++|+.+.. +++.++++.+|+.|++.|++++++++++||+
T Consensus 154 ~~Pe~~~~G~~~~~~~~~~~iv~G~~----~~~~~~~~~~l~~~~~~--~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 154 TNPEFLRESTAIKDYDFPPMTVIGEL----DKQTGDLLEEIYRELDA--PIIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTSSS--CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccccccccchhccCCCEEEEEcC----CHHHHHHHHHHHhccCC--CEEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988889999998875 47888999999999863 5666899999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHhcCCCCCC--CccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHH
Q 011654 234 SALCEATGADVTQVSHAIGKDTRIG--PRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFV 311 (480)
Q Consensus 234 ~~l~~~~Gid~~~v~~~~~~~~~~~--~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~ 311 (480)
+.+|+++|+|++++.++++.++|++ ++++.||+||||+|++||+.++.+.|+++|++ .++++++.++|+.||.+++
T Consensus 228 ~~l~~~~Gid~~~v~~~~~~~~r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~--~pl~~~v~~in~~~~~~~~ 305 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVE--HPMLGSLMRSNSNQVQKAF 305 (436)
T ss_dssp HHHHHHTTSCHHHHHHHHTTCTTTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCC--CTTGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHhcCCCCCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCCC--cHHHHHHHHHHhHhHHHHH
Confidence 9999999999999999999999987 78899999999999999999999999999998 7899999999999999999
Q ss_pred HHHHHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHH---HhhhccccCCCCCCC
Q 011654 312 NRIVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQ---RDLSMKKFDWDHPIH 388 (480)
Q Consensus 312 ~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~---~~~~~~~~~~~~~~~ 388 (480)
+++.+. +++||+|||+|||+||+|+||||++.|++.|+++|++|.+|||++++.... ..|+. ++.+
T Consensus 306 ~~~~~~-----~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~------~~~~ 374 (436)
T 1mv8_A 306 DLITSH-----DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIE------SKIP 374 (436)
T ss_dssp HHHTTS-----SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHH------HTSH
T ss_pred HHHHHh-----cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcc------cccc
Confidence 998753 689999999999999999999999999999999999999999995432100 11110 0000
Q ss_pred CCCCCCCCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhhcCcEEEEecC
Q 011654 389 LQPMSPPASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLREIGFIVYSIGK 467 (480)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~g~~y~~iG~ 467 (480)
.... .+++++++++++||+|||+|+|++|+++| .+.|+.+ +|||+||++++++ ||.|+||||
T Consensus 375 -------~~~~-~~~~~~~~~~~~~d~~vi~~~~~~~~~~~----~~~~~~~-~i~D~r~~~~~~~----g~~~~~ig~ 436 (436)
T 1mv8_A 375 -------HVSS-LLVSDLDEVVASSDVLVLGNGDELFVDLV----NKTPSGK-KLVDLVGFMPHTT----TAQAEGICW 436 (436)
T ss_dssp -------HHHT-TBCSCHHHHHHHCSEEEECSCCGGGHHHH----HSCCTTC-EEEESSSCCSSSC----CSSEEESCC
T ss_pred -------cccc-cccCCHHHHHhCCcEEEEeCCcHHHHhhh----HHhcCCC-EEEECCCCCCccc----CcEEEEecC
Confidence 0001 35678999999999999999999999887 3567666 9999999999864 999999996
No 11
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=100.00 E-value=9.7e-70 Score=560.97 Aligned_cols=396 Identities=22% Similarity=0.326 Sum_probs=342.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||+++|..|++ ||+|++||+++++++.++++..+++++++++++.. ..+++++++++.++++++|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~-~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-KQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-SCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHh-ccCcEEEeCCHHHHhcCCCE
Confidence 799999999999999999986 69999999999999999999999999999888764 24568899999888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||+|.+. ....+|+++++++++++.+ ++++++||++||+++|+++.+.+.+.+ + .++++||++.+
T Consensus 77 viiavpt~~~~----~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~-----~-~v~~~Pe~~~~ 145 (402)
T 1dlj_A 77 VIIATPTNYNS----RINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT-----D-RIIFSPEFLRE 145 (402)
T ss_dssp EEECCCCCEET----TTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC-----S-CEEECCCCCCT
T ss_pred EEEecCCCccc----CCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC-----C-eEEECCccccC
Confidence 99999998532 1237899999999999999 899999999999999999988776543 2 57899999999
Q ss_pred cccccccCCCCeEEEEeCCCc--chHHHHHHHHHHHhc-cCCCC-eEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 162 GTAIQDLFNPDRVLIGGRETP--EGQKAIQALKDVYAH-WVPED-RIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~--~~~~~~~~~~~l~~~-~~~~~-~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
|.+..++..++++++|+.+.. ...+..+.+.++|.. ..+.. .++.+++++|||+|+++|++++++++++||++.+|
T Consensus 146 G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~ 225 (402)
T 1dlj_A 146 SKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYA 225 (402)
T ss_dssp TSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888889999999986310 011556778888864 43212 47788999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++++++++.+||++.+++.||+||||||+|||++++.+.++ |++ .+++++++++|++||.++++++.+.
T Consensus 226 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~--~~l~~~~~~~N~~~~~~~~~~~~~~ 301 (402)
T 1dlj_A 226 ESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYSLPKDTKQLLANYN--NIP--QTLIEAIVSSNNVRKSYIAKQIINV 301 (402)
T ss_dssp HHTTCCHHHHHHHHHTSTTTCSSSCCCCSSCCSSHHHHHHHHHHHHHT--TSS--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHhccCCCCCcCCCCCCCccCCccHHhhHHHHHHHhc--CCC--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999999889999999999999999999999885 776 7899999999999999999999998
Q ss_pred hcC-cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCC
Q 011654 318 MFN-TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPA 396 (480)
Q Consensus 318 l~~-~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+++ .+++++|+|||+|||+||+|+||||++.|++.|+++|++|.+|||+++... .
T Consensus 302 ~~~~~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~---~--------------------- 357 (402)
T 1dlj_A 302 LKEQESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE---S--------------------- 357 (402)
T ss_dssp HTTSCCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC---T---------------------
T ss_pred hhhcCCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH---H---------------------
Confidence 864 678999999999999999999999999999999999999999999976421 0
Q ss_pred CCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCCh
Q 011654 397 SKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDV 452 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~ 452 (480)
..+..++.++++++++||+||+.|.|++|+++. + -+.+|.+|..
T Consensus 358 ~~~~~~~~~~~~~~~~~d~~v~~~~h~~~~~~~-----~-------~~~~~~~~~~ 401 (402)
T 1dlj_A 358 EDQSVLVNDLENFKKQANIIVTNRYDNELQDVK-----N-------KVYSRDIFGR 401 (402)
T ss_dssp TCCSEECCCHHHHHHHCSEEECSSCCGGGGGGG-----G-------GEECCCCSSC
T ss_pred HcCCeecCCHHHHHhCCcEEEEecCChHHHHHh-----h-------ccccccccCC
Confidence 012456788999999999999999999998742 1 1458888853
No 12
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=3.4e-32 Score=269.44 Aligned_cols=250 Identities=16% Similarity=0.159 Sum_probs=207.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+||+|||+|.||.+||.+|.++ ||+|++||+++++++.+.+. +.+..++++++++.||
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~-------------------Ga~~a~s~~e~~~~~d 61 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred cCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCC
Confidence 67999999999999999999998 99999999999999988752 3567889999999999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHH---HHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARM---IANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~---i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++.. +.+.++++++||++||+.|.+++++.+.+++.+ ..++.+|.
T Consensus 62 vv~~~l~~~--------------~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G----~~~lDaPV 123 (300)
T 3obb_A 62 VVISMLPAS--------------QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG----LAMLDAPV 123 (300)
T ss_dssp EEEECCSCH--------------HHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCE
T ss_pred ceeecCCch--------------HHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEecCC
Confidence 999999864 345666643 677888999999999999999999999998764 45678888
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
..++..+....+ .+++||+ ++++++++++|+.+++ ..+++++.+.+..+|+++|.+.+.+++.++|...++
T Consensus 124 sGg~~~A~~G~L---~imvGG~-----~~~~~~~~p~l~~~g~-~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la 194 (300)
T 3obb_A 124 SGGTAGAAAGTL---TFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (300)
T ss_dssp ESCHHHHHHTCE---EEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCE---EEEEeCC-----HHHHHHHHHHHHHhCC-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777655544433 4788996 8899999999999974 456678999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC--------------cc--ccCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGP--------------RF--LNSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVI 300 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~--------------~~--~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
++.|+|++.+.++++..+..++ .. -...++|....+.||+.+..++|++.|++ .++.+.+.
T Consensus 195 ~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~a~ 271 (300)
T 3obb_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLAL 271 (300)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 9999999999999976542111 00 13456788889999999999999999998 66665544
No 13
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=8.7e-32 Score=266.60 Aligned_cols=249 Identities=17% Similarity=0.214 Sum_probs=202.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+++ ||+|++||+++++++.+++. +++++++++++++ +|+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~-aDv 73 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA-------------------GATLADSVADVAA-ADL 73 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT-------------------TCEECSSHHHHTT-SSE
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCEEcCCHHHHHh-CCE
Confidence 5899999999999999999998 99999999999988887752 3577889999888 999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||++ ..++++++++.+.++++++||++||++|++++.+.+.+.+.+ ..++.+|....+
T Consensus 74 vi~~vp~~--------------~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~g~~ 135 (296)
T 3qha_A 74 IHITVLDD--------------AQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARD----IHIVDAPVSGGA 135 (296)
T ss_dssp EEECCSSH--------------HHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGT----CEEEECCEESCH
T ss_pred EEEECCCh--------------HHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcC----CEEEeCCCcCCH
Confidence 99999864 245778899999999999999999999999999988887653 234566765544
Q ss_pred cccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHHHhC
Q 011654 162 GTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEATG 241 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~G 241 (480)
..+.... ..+++|++ ++.+++++++|+.++. ..+++++++.++++|+++|.+.+.++++++|+..+|+++|
T Consensus 136 ~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G 206 (296)
T 3qha_A 136 AAAARGE---LATMVGAD-----REVYERIKPAFKHWAA-VVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG 206 (296)
T ss_dssp HHHHHTC---EEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCC---ccEEecCC-----HHHHHHHHHHHHHHcC-CeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3332221 14678875 7899999999999863 3456678999999999999999999999999999999999
Q ss_pred CCHHHH------HHHhcCCCCC-----CCcccc-CCCCCcc-----cchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 242 ADVTQV------SHAIGKDTRI-----GPRFLN-SSVGFGG-----SCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 242 id~~~v------~~~~~~~~~~-----~~~~~~-pg~g~gg-----~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+|++++ .++++..+.- +.+++. .++||++ .|++||+.++.+.|++.|++ .++++.+.+
T Consensus 207 ~d~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~--~p~~~~~~~ 281 (296)
T 3qha_A 207 LDLQALGRVVRHTDALTGGPGAIMVRDNMKDLEPDNFLYQPFLHTRGLGEKDLSLALALGEAVSVD--LPLARLAYE 281 (296)
T ss_dssp CCHHHHHHHHHHHHHHHCCGGGGCCCSSCSCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred CCHHHHhhhcchHHHHhcCcccCHHhhchhhhhcCCCCCchhhhhhHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999 9988763211 222222 2578888 99999999999999999998 666665543
No 14
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=2.6e-31 Score=266.01 Aligned_cols=250 Identities=17% Similarity=0.130 Sum_probs=205.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. +++.+++++++++++|
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~e~~~~aD 89 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-------------------GATIHEQARAAARDAD 89 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCEEESSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCEeeCCHHHHHhcCC
Confidence 47999999999999999999998 99999999999999988763 3567889999999999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHH--HHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~--~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+||+|||++ ..++.++. ++.+.++++++||++||++|.+++.+.+.+.+.+ ..++.+|..
T Consensus 90 vVi~~vp~~--------------~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~ 151 (320)
T 4dll_A 90 IVVSMLENG--------------AVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALG----IAHLDTPVS 151 (320)
T ss_dssp EEEECCSSH--------------HHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEEECCCH--------------HHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC----CEEEeCCCc
Confidence 999999864 23566666 7888899999999999999999999888887653 345667876
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+.... ..+++|++ ++++++++++|+.+ . ..++.++++.++++|+++|.+.+.++++++|+..+|+
T Consensus 152 g~~~~a~~g~---l~i~~gg~-----~~~~~~~~~ll~~~-~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 221 (320)
T 4dll_A 152 GGTVGAEQGT---LVIMAGGK-----PADFERSLPLLKVF-G-RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFAT 221 (320)
T ss_dssp CHHHHHHHTC---EEEEEESC-----HHHHHHHHHHHHHH-E-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcCC---eeEEeCCC-----HHHHHHHHHHHHhc-C-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5543332221 15778875 78999999999998 4 4667778999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCC-------Cccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTRIG-------PRFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|++++.++++.++..+ ..++ .+++||+..|++||+.++.+++++.|++ .++.+.+.+
T Consensus 222 ~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 291 (320)
T 4dll_A 222 KGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIGFD--APITGLFEQ 291 (320)
T ss_dssp HTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 99999999999998765211 1222 3467899999999999999999999998 666655443
No 15
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=1.5e-31 Score=264.65 Aligned_cols=249 Identities=15% Similarity=0.152 Sum_probs=197.7
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcEE
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADIV 82 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDvV 82 (480)
||+|||+|+||.+||.+|+++ ||+|++||+++++++.+.+. +.+.++++.++++.+|+|
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------G~~~~~s~~e~~~~~dvv 65 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKL-------------------GATVVENAIDAITPGGIV 65 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTT-------------------TCEECSSGGGGCCTTCEE
T ss_pred cEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHc-------------------CCeEeCCHHHHHhcCCce
Confidence 899999999999999999998 99999999999988776542 356788999999999999
Q ss_pred EEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccccc
Q 011654 83 FVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLAE 161 (480)
Q Consensus 83 ii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
|+|||++. .+++++ ..+.+.+++++++|++||+.|.+++++.+.+++.+ +.++.+|...++
T Consensus 66 i~~l~~~~--------------~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g----~~~ldapVsGg~ 127 (297)
T 4gbj_A 66 FSVLADDA--------------AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG----AHYVGAPIFARP 127 (297)
T ss_dssp EECCSSHH--------------HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEECCH
T ss_pred eeeccchh--------------hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC----CceecCCcCCCc
Confidence 99998752 233333 45778889999999999999999999999888764 467889988777
Q ss_pred cccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeC-ChhHHHHhhhHHhHHHHHHHHHHHHHHHHHHHh
Q 011654 162 GTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITT-NLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
..+..... .+++||+ ++.+++++++|+.+++ ..++++ +++.++.+|+++|.+.+.+++.++|...+|+++
T Consensus 128 ~~a~~g~l---~im~gG~-----~~~~~~~~~~l~~~g~-~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~ 198 (297)
T 4gbj_A 128 EAVRAKVG---NICLSGN-----AGAKERIKPIVENFVK-GVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKN 198 (297)
T ss_dssp HHHHHTCC---EEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccc---eeecccc-----hhHHHHHHHHHHHhhC-CeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66554433 5788886 8899999999999974 344555 579999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCCCCCc-------cc--cC-CCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 241 GADVTQVSHAIGKDTRIGPR-------FL--NS-SVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 241 Gid~~~v~~~~~~~~~~~~~-------~~--~p-g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
|+|+++++++++..+.-++. ++ .+ .+||....+.||+.+.+++|++.|++ .++.+.+.+
T Consensus 199 Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~~~~ 267 (297)
T 4gbj_A 199 GISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASDVNAP--MPFADIIRN 267 (297)
T ss_dssp TCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred CCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHHhCCC--ChHHHHHHH
Confidence 99999999999876532211 11 22 24788889999999999999999998 666655443
No 16
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.98 E-value=1.4e-31 Score=266.89 Aligned_cols=251 Identities=12% Similarity=0.108 Sum_probs=204.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.+||..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEH-------------------GASVCESPAEVIKKCK 79 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeEcCCHHHHHHhCC
Confidence 68999999999999999999998 99999999999998887742 3567889999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHH---HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++||++||++|++++.+.+.+++.+ ..++.+|.
T Consensus 80 vvi~~vp~~--------------~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g----~~~v~~pv 141 (310)
T 3doj_A 80 YTIAMLSDP--------------CAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKG----GRFVEGPV 141 (310)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEeCCC
Confidence 999999865 2356666 77888899999999999999999999988887653 23456786
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+... ...+++|++ ++.+++++++|+.++. ..++.++++.++++|+++|.+.+.++++++|+..+|
T Consensus 142 ~g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 212 (310)
T 3doj_A 142 SGSKKPAEDG---QLIILAAGD-----KALFEESIPAFDVLGK-RSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLA 212 (310)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHhcC---CeEEEEcCC-----HHHHHHHHHHHHHhCC-CEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554433222 114677875 7899999999999863 345566899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGP-------RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++..++ .++ .+.+||++.|+.||+.++.++|++.|++ .++.+.+.+
T Consensus 213 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 283 (310)
T 3doj_A 213 DKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVS--MPVAAAANE 283 (310)
T ss_dssp HHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987642211 122 3467899999999999999999999998 666665443
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.97 E-value=1.5e-30 Score=256.53 Aligned_cols=251 Identities=16% Similarity=0.089 Sum_probs=204.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.|||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.+++++++++++|
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 59 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL-------------------GAERAATPCEVVESCP 59 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 38999999999999999999998 99999999999998887753 3567889999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHH---HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++||++||++|.+++.+.+.+++.+ ..++.+|.
T Consensus 60 vvi~~vp~~--------------~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g----~~~~~~pv 121 (287)
T 3pef_A 60 VTFAMLADP--------------AAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKG----GRFLEAPV 121 (287)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhC----CEEEECCC
Confidence 999999864 2356777 78888999999999999999999999888887653 23455776
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+.... ..+++|++ ++..++++++|+.++. ..++.++++.++++|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~ 192 (287)
T 3pef_A 122 SGSKKPAEDGT---LIILAAGD-----RNLYDEAMPGFEKMGK-KIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALG 192 (287)
T ss_dssp ECCHHHHHHTC---EEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCC---EEEEEeCC-----HHHHHHHHHHHHHhCC-CeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554432221 14677875 7899999999999863 345567899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------Cccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIG-------PRFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++..+ ..++ .+.+||++.|+.||+.++.++|++.|++ .++.+.+.+
T Consensus 193 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~ 263 (287)
T 3pef_A 193 EKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQP--LVASAAANE 263 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999998654211 1122 2467899999999999999999999998 676665544
No 18
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.97 E-value=3.1e-30 Score=256.30 Aligned_cols=251 Identities=13% Similarity=0.091 Sum_probs=200.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. +...+++++++++++||+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------------------g~~~~~~~~~e~~~~aDv 67 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE------------------GACGAAASAREFAGVVDA 67 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------TCSEEESSSTTTTTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc------------------CCccccCCHHHHHhcCCE
Confidence 7899999999999999999998 99999999999999988753 112236788888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH---HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||++ ..++.++ +++.+.++++++||++||++|.+++.+.+.+.+.+ ..++.+|..
T Consensus 68 vi~~vp~~--------------~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~ 129 (303)
T 3g0o_A 68 LVILVVNA--------------AQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALN----LNMLDAPVS 129 (303)
T ss_dssp EEECCSSH--------------HHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCEE
T ss_pred EEEECCCH--------------HHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC----CeEEeCCCC
Confidence 99999864 2345565 67788899999999999999999999888887653 234457766
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCC-hhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTN-LWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
..+..+.... ..+++|++ ++.+++++++|+.++. ..++.++ ++.+++.|+++|.+.++++++++|+..+|
T Consensus 130 g~~~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 200 (303)
T 3g0o_A 130 GGAVKAAQGE---MTVMASGS-----EAAFTRLKPVLDAVAS-NVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALA 200 (303)
T ss_dssp SCHHHHHTTC---EEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhcCC---eEEEeCCC-----HHHHHHHHHHHHHHCC-CEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544332221 14677764 7899999999999863 3455666 89999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGP-------RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.....++ .++ .+.+||+..|+.||+.+++++|++.|++ .++.+.+.+
T Consensus 201 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~~ 271 (303)
T 3g0o_A 201 ARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFP--LPLASTALN 271 (303)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987542111 122 2457899999999999999999999998 666665443
No 19
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.97 E-value=1.4e-30 Score=256.64 Aligned_cols=251 Identities=18% Similarity=0.143 Sum_probs=202.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~ad 59 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVAL-------------------GARQASSPAEVCAACD 59 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHH-------------------TCEECSCHHHHHHHCS
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHHcCC
Confidence 78999999999999999999998 99999999999988877642 3567889999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHH---HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++||++||+.|++++.+.+.+++.+ ..++.+|.
T Consensus 60 vvi~~v~~~--------------~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g----~~~~~~pv 121 (287)
T 3pdu_A 60 ITIAMLADP--------------AAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARG----GRFLEAPV 121 (287)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEECCc
Confidence 999999864 2356666 77888889999999999999999999888887653 23455676
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+.... ..+++|++ ++..++++++|+.++. ..++.++++.+++.|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 192 (287)
T 3pdu_A 122 SGTKKPAEDGT---LIILAAGD-----QSLFTDAGPAFAALGK-KCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALG 192 (287)
T ss_dssp ECCHHHHHHTC---EEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCC---EEEEEeCC-----HHHHHHHHHHHHHhCC-CEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443222211 14677875 7899999999999863 345566899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------Cccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIG-------PRFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++..+ ..++ .+.+||+..|+.||+.++.+.+++.|++ .++.+.+.+
T Consensus 193 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~ 263 (287)
T 3pdu_A 193 RNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQP--LHGAATANE 263 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999998754211 1122 3467899999999999999999999998 666665543
No 20
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.97 E-value=1.5e-29 Score=251.08 Aligned_cols=250 Identities=16% Similarity=0.169 Sum_probs=200.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. +++.+++++++++++|
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 61 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred CCEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCeEcCCHHHHHhCCC
Confidence 78999999999999999999998 99999999999999888752 3567889999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHH---HHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..++.++. ++.+.++++++|+++||+.+.+++.+.+.+++.+ ..++.+|.
T Consensus 62 vvi~~vp~~--------------~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g----~~~~~~pv 123 (302)
T 2h78_A 62 VVISMLPAS--------------QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG----LAMLDAPV 123 (302)
T ss_dssp EEEECCSCH--------------HHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTT----CCEEECCE
T ss_pred eEEEECCCH--------------HHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcC----CEEEEEEc
Confidence 999999864 23566776 7888899999999999999999988888887653 23345675
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+.... -.+++|++ ++..+.++++|+.++. ..++.++.+.++++|+++|.+.+.++++++|+..+|
T Consensus 124 ~~~~~~~~~g~---l~~~~~g~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~ 194 (302)
T 2h78_A 124 SGGTAGAAAGT---LTFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (302)
T ss_dssp ESCHHHHHHTC---EEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhhHhcCC---ceEEeCCC-----HHHHHHHHHHHHHhCC-CeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44332211111 13566764 7899999999999863 345667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------C-------ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIG-------P-------RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVI 300 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~-------~-------~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
++.|+|++++.++++.++..+ . .++ .+.+||+..|+.||+.++++++++.|++ .++.+.+.
T Consensus 195 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~ 271 (302)
T 2h78_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLAL 271 (302)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 999999999999998764211 1 121 2346889999999999999999999998 66665443
No 21
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.96 E-value=6.9e-28 Score=240.78 Aligned_cols=242 Identities=13% Similarity=0.097 Sum_probs=180.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCH-------HHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEec-C
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK-IEVAVVDISV-------SRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFST-D 71 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~-------~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~-d 71 (480)
+|||+|||+|+||.++|..|+++ | ++|++||+++ +..+.+.+ .+ + ++ +
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~------------------~g-~--~~~s 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAE------------------LG-V--EPLD 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHH------------------TT-C--EEES
T ss_pred CCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHH------------------CC-C--CCCC
Confidence 37999999999999999999998 9 9999999997 34444332 12 3 44 7
Q ss_pred HHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCcee
Q 011654 72 IEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQ 151 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~ 151 (480)
+++++++||+||+|||++. ..+.++++.+.++++++||++||++|++++++.+.+++.+. .
T Consensus 81 ~~e~~~~aDvVi~avp~~~---------------~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~--~-- 141 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAA---------------TKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKG--S-- 141 (317)
T ss_dssp SGGGGGGCSEEEECCCGGG---------------HHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSC--E--
T ss_pred HHHHHhcCCEEEEecCCHH---------------HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC--e--
Confidence 7788899999999999653 13455889999999999999999999999999888876532 2
Q ss_pred EeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCC-hhHHHHhhhHHhHHHHHHHHHH
Q 011654 152 ILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTN-LWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 152 v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
++.+|....+. +..+ ...+++|++ ++ ++++++|+.++. ..+++++ ++.|+++|+++|++.+++++++
T Consensus 142 ~~d~pv~g~~~-a~~g---~l~i~vgg~-----~~--~~~~~ll~~~g~-~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~ 209 (317)
T 4ezb_A 142 FVEGAVMARVP-PYAE---KVPILVAGR-----RA--VEVAERLNALGM-NLEAVGETPGQASSLKMIRSVMIKGVEALL 209 (317)
T ss_dssp EEEEEECSCST-TTGG---GSEEEEEST-----TH--HHHHHHHHTTTC-EEEEEESSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCch-hhcC---CEEEEEeCC-----hH--HHHHHHHHHhCC-CeEEeCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 23334332111 1111 125788886 23 789999999863 3455565 8999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHhcCCC-CCC-----Ccccc--CCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHH
Q 011654 231 NAMSALCEATGADVTQVSHAIGKDT-RIG-----PRFLN--SSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKV 302 (480)
Q Consensus 231 nE~~~l~~~~Gid~~~v~~~~~~~~-~~~-----~~~~~--pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
||+..+|+++|+|+ ++++.+..+. +.. ..++. +++||+ ++||+.++.+++++.|++ .++.+.+.+.
T Consensus 210 ~E~~~la~~~Gid~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~ 283 (317)
T 4ezb_A 210 IEALSSAERAGVTE-RILDSVQETFPGLDWRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLN--APMSRAACET 283 (317)
T ss_dssp HHHHHHHHHTTCHH-HHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCH-HHHHHHHhcCccccHHHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 99999999999999 5666665432 211 11221 234444 699999999999999998 6777665543
No 22
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.95 E-value=1.3e-27 Score=238.24 Aligned_cols=248 Identities=11% Similarity=0.055 Sum_probs=187.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC--HHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDIS--VSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~--~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
||||+|||+|+||.++|..|+++ |+ +|++||++ +++.+.+.+. +++.+++++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~-------------------g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEEL-------------------GVSCKASVAEVAG 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHT-------------------TCEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHC-------------------CCEEeCCHHHHHh
Confidence 47999999999999999999998 99 99999997 6777766642 3567788989899
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||++. ..++++++.+.++++++||++||+.|++++.+.+.+.+...+ ..++.+|.
T Consensus 83 ~aDvVi~~vp~~~---------------~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g--~~~vd~pv 145 (312)
T 3qsg_A 83 ECDVIFSLVTAQA---------------ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPS--AQYAAVAV 145 (312)
T ss_dssp HCSEEEECSCTTT---------------HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTT--CEEEEEEE
T ss_pred cCCEEEEecCchh---------------HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCC--CeEEeccc
Confidence 9999999999753 134678899999999999999999999999988877765211 22334454
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCC-hhHHHHhhhHHhHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTN-LWSAELSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
...+..+ .. ...+++|++ ++ ++++++|+.++. ..++.++ ++.|+++|+++|++.+.++++++|+..+
T Consensus 146 ~g~~~~~-~g---~l~i~vgg~-----~~--~~~~~ll~~~g~-~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l 213 (312)
T 3qsg_A 146 MSAVKPH-GH---RVPLVVDGD-----GA--RRFQAAFTLYGC-RIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAA 213 (312)
T ss_dssp CSCSTTT-GG---GSEEEEEST-----TH--HHHHHHHHTTTC-EEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchhh-cC---CEEEEecCC-----hH--HHHHHHHHHhCC-CeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222 11 125778886 22 889999999863 3344555 8999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHhcCCC--CC----CCcccc--CCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHHH
Q 011654 237 CEATGADVTQVSHAIGKDT--RI----GPRFLN--SSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVND 304 (480)
Q Consensus 237 ~~~~Gid~~~v~~~~~~~~--~~----~~~~~~--pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (480)
|+++|+|+ ++++.++.+. +. +..++. +++||. +.||+.++++.+++.|++ .++++.+.+.-+
T Consensus 214 a~~~Gld~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~~~ 283 (312)
T 3qsg_A 214 AEKMGLAD-RVLASLDASFPEHHLRDLALYLVERNLEHADR---RAHELGEVAATLCSVGVE--PLVAEAGYRRLT 283 (312)
T ss_dssp HHTTTCHH-HHHHHHHHHSGGGTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHHcCCCH-HHHHHHHhcCCchhHHHhhhHhhcCCCCcccc---hHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Confidence 99999999 6888887542 11 111222 233333 489999999999999998 677776665443
No 23
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.94 E-value=3.1e-26 Score=227.71 Aligned_cols=246 Identities=10% Similarity=0.082 Sum_probs=186.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.+||..|+++ |++|++||+++++++.+.+. +...++++++++++||
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~e~~~~aD 67 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAA-------------------GAHLCESVKAALSASP 67 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH-------------------TCEECSSHHHHHHHSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 36899999999999999999998 99999999999999887641 2466788999899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHH--HHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~--~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+||+|||++. .+++++. .+.. +.++++||++||+.|.+++.+.+.+++.+ ..++.+|..
T Consensus 68 vVi~~vp~~~--------------~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g----~~~vdapv~ 128 (306)
T 3l6d_A 68 ATIFVLLDNH--------------ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAG----GHYVKGMIV 128 (306)
T ss_dssp EEEECCSSHH--------------HHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTT----CEEEEEEEE
T ss_pred EEEEEeCCHH--------------HHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEecccc
Confidence 9999998642 2455554 5544 46899999999999999999988887654 233455554
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEe--CC-hhHHHHhhhHHhHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIIT--TN-LWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~--~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
..+...-.. ...+++|++ ++.+++++++|+.++. ..+++ ++ ++.++++| .+.+.++++++|...
T Consensus 129 g~~~~~~~~---~~~i~~gg~-----~~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~ 195 (306)
T 3l6d_A 129 AYPRNVGHR---ESHSIHTGD-----REAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVG 195 (306)
T ss_dssp SCGGGTTCT---TCEEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred cCcccccCC---ceEEEEcCC-----HHHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHH
Confidence 332111110 115778885 7899999999999853 34555 44 78999999 455678999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCC--CC-------CCccc--cCCC-CCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 236 LCEATGADVTQVSHAIGKDT--RI-------GPRFL--NSSV-GFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~--~~-------~~~~~--~pg~-g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+|++.|+|++++.++++... .. +..++ ...+ +|...|+.||+.++++.+++.|++ .++.+.+.+
T Consensus 196 la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 271 (306)
T 3l6d_A 196 AGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVW--TPVFDAVCQ 271 (306)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCC--chHHHHHHH
Confidence 99999999999999987642 11 11122 1233 368899999999999999999998 677666544
No 24
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.94 E-value=4.4e-25 Score=223.45 Aligned_cols=246 Identities=15% Similarity=0.186 Sum_probs=194.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC--
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA-- 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a-- 79 (480)
|||+|||+|.||.+||..|+++ |++|++||+++++++.+.+. ++..+++++++++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------g~~~~~s~~e~~~~a~~ 81 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-------------------GIAGARSIEEFCAKLVK 81 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCBCCSSHHHHHHHSCS
T ss_pred CEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCEEeCCHHHHHhcCCC
Confidence 7999999999999999999998 99999999999999988863 244567888888888
Q ss_pred -cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 80 -DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 80 -DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|+||+|||++ .++++++++.+.++++++||+.||+.|.+++++.+.+.+.+ +.++.+|..
T Consensus 82 ~DvVi~~vp~~---------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g----~~~vdapVs 142 (358)
T 4e21_A 82 PRVVWLMVPAA---------------VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG----ITYVDVGTS 142 (358)
T ss_dssp SCEEEECSCGG---------------GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT----CEEEEEEEE
T ss_pred CCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC----CEEEeCCCC
Confidence 9999999864 25778899999999999999999999999998888777654 233455655
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCC-------------------CCeEEeCChhHHHHhhhHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVP-------------------EDRIITTNLWSAELSKLAA 219 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~v~~~~~~~ae~~Kl~~ 219 (480)
..+..+... +.+++|++ ++++++++++|+.++. ...+++++.++++++|+++
T Consensus 143 Gg~~~a~~G----~~im~GG~-----~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~ 213 (358)
T 4e21_A 143 GGIFGLERG----YCLMIGGE-----KQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVH 213 (358)
T ss_dssp CGGGHHHHC----CEEEEESC-----HHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHH
T ss_pred CCHHHHhcC----CeeeecCC-----HHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHH
Confidence 444333322 15888986 7899999999999872 1356678899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHh------------------------CCCHHHHHHHhcCCCCCCCccc---------cCCC
Q 011654 220 NAFLAQRISSVNAMSALCEAT------------------------GADVTQVSHAIGKDTRIGPRFL---------NSSV 266 (480)
Q Consensus 220 N~~~~~~ia~~nE~~~l~~~~------------------------Gid~~~v~~~~~~~~~~~~~~~---------~pg~ 266 (480)
|.+.+.++++++|...++++. |+|..++.+.++.++.+++.++ +|+.
T Consensus 214 n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~p~~ 293 (358)
T 4e21_A 214 NGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDSPDL 293 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhCCCh
Confidence 999999999999999999998 8999999999998764433222 3433
Q ss_pred -CCcccchhhhH---HHHHHHHHHcCCchhhhHHHHHH
Q 011654 267 -GFGGSCFQKDI---LNLVYICECNGLTEVANYWKQVI 300 (480)
Q Consensus 267 -g~gg~cl~kD~---~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
.|.+. .+|. +..+..|.+.|++ .+++.++.
T Consensus 294 ~~~~~~--~~d~g~~r~~~~~A~~~gvp--~p~~~~al 327 (358)
T 4e21_A 294 QEFQGR--VSDSGEGRWTVAAAIDEGVP--AHVLSSAL 327 (358)
T ss_dssp TTC--C--CCCCSHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HHHHHH--HHhcCcHHHHHHHHHHcCCC--hHHHHHHH
Confidence 13322 3444 5678889999999 67776554
No 25
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.94 E-value=7.9e-25 Score=216.50 Aligned_cols=250 Identities=18% Similarity=0.224 Sum_probs=194.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||+++++.+.+.+. ++..+++++++++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA-------------------GAETASTAKAIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEECSSHHHHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCCE
Confidence 6999999999999999999998 89999999999998887752 24567788888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH---HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|+|++. .++.++ +++.+.++++++|++.|+..+.+.+.+.+.+.+.+ +.++.+|..
T Consensus 65 vi~~v~~~~--------------~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~pv~ 126 (299)
T 1vpd_A 65 IITMLPNSP--------------HVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKG----VEMLDAPVS 126 (299)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEecCC
Confidence 999998642 245566 57778889999999999988888888888877643 234456765
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|++ ++..+.++++|+.++. ..++..+.+.+.+.|+++|.+.++.+++++|+..+++
T Consensus 127 ~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~ 197 (299)
T 1vpd_A 127 GGEPKAIDG---TLSVMVGGD-----KAIFDKYYDLMKAMAG-SVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLAT 197 (299)
T ss_dssp SHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443322221 114666763 7889999999998852 2345568999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCC-------Cccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTRIG-------PRFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|.+++.+++.....-+ +.++ ...+|+...++.||+.++.++++++|++ .++.+.+.+
T Consensus 198 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~ 267 (299)
T 1vpd_A 198 KAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ--LPLTAAVME 267 (299)
T ss_dssp HTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 99999999999987653110 1111 1246788899999999999999999998 566554443
No 26
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.93 E-value=6.7e-25 Score=216.49 Aligned_cols=252 Identities=18% Similarity=0.161 Sum_probs=194.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++. |++|++|| ++++.+.+.+. ++..+++++++++++|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D 60 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSL-------------------GAVNVETARQVTEFAD 60 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTT-------------------TCBCCSSHHHHHHTCS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHc-------------------CCcccCCHHHHHhcCC
Confidence 58999999999999999999998 99999999 98888777652 2334567888889999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHH---HHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||.+. .+..++. ++.+.++++++|++.|+..+.+.+.+.+.+.+.+ +.++.+|.
T Consensus 61 ~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~p~ 122 (295)
T 1yb4_A 61 IIFIMVPDTP--------------QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMG----ADYLDAPV 122 (295)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTT----EEEEECCE
T ss_pred EEEEECCCHH--------------HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEccC
Confidence 9999998642 2455665 6777788899999999888888888888777632 34456776
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
..++..+..+ ...+++|++ ++..+.++++|+.++. ..++..+.+.+.+.|+++|.+.++.+++++|+..++
T Consensus 123 ~~~~~~a~~g---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~ 193 (295)
T 1yb4_A 123 SGGEIGAREG---TLSIMVGGE-----QKVFDRVKPLFDILGK-NITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFA 193 (295)
T ss_dssp ESHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHcC---CeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554322221 113566763 7889999999999852 235556889999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHHH
Q 011654 238 EATGADVTQVSHAIGKDTRIGP-------RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKVN 303 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (480)
++.|+|.+++.+++.....-++ .++ ...+|+...++.||+.++++.+++.|++ .++.+++.+..
T Consensus 194 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~~ 266 (295)
T 1yb4_A 194 SKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKALALN--LPNTATCQELF 266 (295)
T ss_dssp HHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 9999999999999986542111 111 2346788899999999999999999998 66666555443
No 27
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.92 E-value=3.3e-24 Score=211.68 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=188.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|++. |++|++||+++++++.+.+. +++.+++++++++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDA-------------------GEQVVSSPADVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTT-------------------TCEECSSHHHHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeecCCHHHHHhcCCE
Confidence 7999999999999999999998 99999999999999888752 35567888888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHH---HHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARM---IANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~---i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||.+. .++.++.+ +.+.++++++|++.|++++.+.+.+.+.+.+.+ ..+..+|..
T Consensus 60 vi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g----~~~~~~p~~ 121 (296)
T 2gf2_A 60 IITMLPTSI--------------NAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG----AVFMDAPVS 121 (296)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEEcCCC
Confidence 999998642 23555554 345678899999988999988888877776542 233456765
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
.++..+.... ..+++|++ ++..+.++++|+.++. ..++....+.+.+.|+++|.+.++.+++++|+..+++
T Consensus 122 ~g~~~a~~~~---~~~~~~~~-----~~~~~~v~~l~~~~g~-~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~ 192 (296)
T 2gf2_A 122 GGVGAARSGN---LTFMVGGV-----EDEFAAAQELLGCMGS-NVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGI 192 (296)
T ss_dssp SHHHHHHHTC---EEEEEESC-----GGGHHHHHHHHTTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhcCc---EEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4432111111 13566654 6788899999998852 2344567789999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCC---------Cccc-------cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTRIG---------PRFL-------NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~---------~~~~-------~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+.|+|.+++.++++.....+ +..+ +..+||...++.||+.+++++++++|++ .++.+.+.
T Consensus 193 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~ 268 (296)
T 2gf2_A 193 RLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSP--ILLGSLAH 268 (296)
T ss_dssp HTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred HcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 99999999999887532100 0111 2235688899999999999999999998 66555443
No 28
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.92 E-value=3.4e-23 Score=204.90 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=193.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||+++++.+.+.+. ++..+++++++++++|+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D~ 63 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQ-------------------GAQACENNQKVAAASDI 63 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTT-------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCCE
Confidence 7999999999999999999998 99999999999999888752 24566788888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHH---HHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAAR---MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||.+. .++.++. ++.+.++++++|++.|+..+++.+.+.+.+.+.+ +.++.+|..
T Consensus 64 vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g----~~~~~~p~~ 125 (301)
T 3cky_A 64 IFTSLPNAG--------------IVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKG----IDYVDAPVS 125 (301)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEccCC
Confidence 999998642 2456664 7778889999999988888888888888776643 234467765
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|++ ++..+.++++|+.++. ..++.++.+.+.+.|++.|.+.++.+++++|+..+++
T Consensus 126 ~~~~~a~~g---~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 196 (301)
T 3cky_A 126 GGTKGAEAG---TLTIMVGAS-----EAVFEKIQPVLSVIGK-DIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGV 196 (301)
T ss_dssp SHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHcC---CeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443211111 113566663 7789999999998852 2345678899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCC-------CCC-ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTR-------IGP-RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~-------~~~-~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+.|+|.+++.+++..... ..+ .++ ...+|+...++.||+.++++.++++|++ .++.+.+.+
T Consensus 197 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~ 267 (301)
T 3cky_A 197 KCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVP--LPMTAMATQ 267 (301)
T ss_dssp HTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHH
Confidence 999999999998875421 112 222 2345778899999999999999999998 666555443
No 29
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.92 E-value=7.1e-24 Score=214.64 Aligned_cols=277 Identities=14% Similarity=0.143 Sum_probs=200.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC-CCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG-DQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ |++|++||+++++++.+++ +.++.+.|++. ...++++++|++++++++|
T Consensus 30 mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~------l~~~i~~t~d~~ea~~~aD 101 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYP------FPETLKAYCDLKASLEGVT 101 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCC------CCTTEEEESCHHHHHTTCC
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCc------cCCCeEEECCHHHHHhcCC
Confidence 7999999999999999999998 9999999999999999986 45555666643 1356889999998899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-CccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VPVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||+ ..++++++++.++++++++|+..++ +.+++ +.+.+.+++..++..+.+.++|++.
T Consensus 102 vVilaVp~---------------~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~a 165 (356)
T 3k96_A 102 DILIVVPS---------------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLA 165 (356)
T ss_dssp EEEECCCH---------------HHHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCCH
T ss_pred EEEECCCH---------------HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccHH
Confidence 99999985 2478899999999999998887654 77777 6677777654323457788999988
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeE-EeCChhHHHHh-----------------hhHHhH
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRI-ITTNLWSAELS-----------------KLAANA 221 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v-~~~~~~~ae~~-----------------Kl~~N~ 221 (480)
.+... ..|..+++++. +++..+.++++|+... .++ ...|+..+|+. |+..|+
T Consensus 166 ~ev~~----g~pt~~via~~----~~~~~~~v~~lf~~~~--~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~ 235 (356)
T 3k96_A 166 TEVAA----NLPTAVSLASN----NSQFSKDLIERLHGQR--FRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNA 235 (356)
T ss_dssp HHHHT----TCCEEEEEEES----CHHHHHHHHHHHCCSS--EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHc----CCCeEEEEecC----CHHHHHHHHHHhCCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchH
Confidence 76542 34556777876 5788999999999753 344 45788888875 677788
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCC-------CCCCccc---cCCCCCc----------ccchhhhHHHHH
Q 011654 222 FLAQRISSVNAMSALCEATGADVTQVSHAIGKDT-------RIGPRFL---NSSVGFG----------GSCFQKDILNLV 281 (480)
Q Consensus 222 ~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-------~~~~~~~---~pg~g~g----------g~cl~kD~~~l~ 281 (480)
..++.+.+++|+.++|+++|+|++++.+..+..- ..+.++- .-|-|.. ----.++...+.
T Consensus 236 ~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~ 315 (356)
T 3k96_A 236 RAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVH 315 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHH
Confidence 8999999999999999999999998886543210 0111110 0000000 001124566777
Q ss_pred HHHHHcCCchhhhHHHHHHHH--HHHhHHHHHHHH
Q 011654 282 YICECNGLTEVANYWKQVIKV--NDYQKNRFVNRI 314 (480)
Q Consensus 282 ~~a~~~g~~~~~~~~~~~~~~--N~~~~~~~~~~~ 314 (480)
.+++++|++ .|+.+++-++ ++.-|...++.+
T Consensus 316 ~la~~~~v~--~Pi~~~v~~il~~~~~~~~~~~~l 348 (356)
T 3k96_A 316 ALAQKHAIE--MPLTFQVHRILHEDLDPQQAVQEL 348 (356)
T ss_dssp HHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHH
Confidence 778888876 6666665543 334455444444
No 30
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.91 E-value=9.2e-24 Score=220.75 Aligned_cols=207 Identities=11% Similarity=0.146 Sum_probs=168.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc---
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--- 77 (480)
+|+|+|||+|.||.+||.+|+++ ||+|++||+++++++.+.+.... ..++..+++++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~--------------g~~i~~~~s~~e~v~~l~ 67 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK--------------GTKVVGAQSLKEMVSKLK 67 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT--------------TSSCEECSSHHHHHHTBC
T ss_pred CCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccC--------------CCceeccCCHHHHHhhcc
Confidence 58999999999999999999998 99999999999999988753210 124566788888776
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
++|+||+|||++ ..++++++++.+.++++++||+.||+.+.+++++.+.+.+.+ +.++.+|.
T Consensus 68 ~aDvVil~Vp~~--------------~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G----i~fvd~pV 129 (484)
T 4gwg_A 68 KPRRIILLVKAG--------------QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG----ILFVGSGV 129 (484)
T ss_dssp SSCEEEECSCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc----cccccCCc
Confidence 599999999864 245778899999999999999999999988888877777654 23445565
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCe-------EEeCChhHHHHhhhHHhHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDR-------IITTNLWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~-------v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
..++..+.. .+.+++||+ ++++++++++|+.+.. .. +++++.++++.+|+++|.+.+..++++
T Consensus 130 sGg~~gA~~----G~~im~GG~-----~ea~~~v~pll~~ig~-~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~i 199 (484)
T 4gwg_A 130 SGGEEGARY----GPSLMPGGN-----KEAWPHIKTIFQGIAA-KVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLI 199 (484)
T ss_dssp ESHHHHHHH----CCEEEEEEC-----GGGHHHHHHHHHHHSC-BCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhc----CCeeecCCC-----HHHHHHHHHHHHHhcC-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 544433322 226888986 6789999999999864 22 456788999999999999999999999
Q ss_pred HHHHHHHHH-hCCCHHHHHHHh
Q 011654 231 NAMSALCEA-TGADVTQVSHAI 251 (480)
Q Consensus 231 nE~~~l~~~-~Gid~~~v~~~~ 251 (480)
+|+..++++ +|+|++++.+++
T Consensus 200 aEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 200 CEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999 999999998886
No 31
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.91 E-value=3.3e-23 Score=206.60 Aligned_cols=249 Identities=14% Similarity=0.118 Sum_probs=188.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|++. |++|++||+++++.+.+.+. ++..++++.++++++|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 89 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQE-------------------GARLGRTPAEVVSTCDI 89 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHT-------------------TCEECSCHHHHHHHCSE
T ss_pred CeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCCE
Confidence 7899999999999999999998 89999999999988777642 24556788888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHH---HhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMI---ANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i---~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||++. .++.++..+ .+.++++++|++.|++.+.+.+.+.+.+.+.+ ..++.+|..
T Consensus 90 Vi~av~~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~----~~~v~~p~~ 151 (316)
T 2uyy_A 90 TFACVSDPK--------------AAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRG----GRFLEAPVS 151 (316)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEEcCcc
Confidence 999998642 245555543 36788899999999988888888887776532 234455644
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+...... ...+++|++ ++..+.++++|+.++. ..++..+++.+.+.|++.|.+....+++++|+..+++
T Consensus 152 g~~~~~~~g---~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~ 222 (316)
T 2uyy_A 152 GNQQLSNDG---MLVILAAGD-----RGLYEDCSSCFQAMGK-TSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQ 222 (316)
T ss_dssp SCHHHHHHT---CEEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhhC---CEEEEeCCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322211111 113556774 6788999999999852 2334458999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCC-------ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTRIGP-------RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+.|++.+++.++++....-++ .++ ...+|+...++.||..++++++++.|++ .++.+.+.
T Consensus 223 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~ 291 (316)
T 2uyy_A 223 VTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHP--TPMAAAAN 291 (316)
T ss_dssp HTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred HcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHhCCC--ChHHHHHH
Confidence 999999999998875431111 111 2456788899999999999999999998 56555443
No 32
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.91 E-value=4.3e-23 Score=202.79 Aligned_cols=249 Identities=16% Similarity=0.154 Sum_probs=188.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++ |++|++||+++++.+.+.+. ++..++ +.++++++|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~-~~~~~~~~D 57 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-------------------FGSEAV-PLERVAEAR 57 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-------------------HCCEEC-CGGGGGGCS
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-------------------CCcccC-HHHHHhCCC
Confidence 6899999999999999999986 68999999999988877642 122334 566788999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||++. .+..+++++.+.++++++|++.|+..+.+.+.+.+.+.+.+ ..++.+|....
T Consensus 58 ~vi~~v~~~~--------------~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~p~~~~ 119 (289)
T 2cvz_A 58 VIFTCLPTTR--------------EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKG----VTYLDAPVSGG 119 (289)
T ss_dssp EEEECCSSHH--------------HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTT----EEEEECCEESH
T ss_pred EEEEeCCChH--------------HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEEecCCCC
Confidence 9999998642 24667788888889999999999988888888888776542 34455675433
Q ss_pred ccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHHHh
Q 011654 161 EGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
+..+... ...+++|++ ++..+.++++| .++. ..++..+.+.+.+.|++.|.+..+.+++++|+..++++.
T Consensus 120 ~~~~~~g---~~~~~~~~~-----~~~~~~~~~ll-~~g~-~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~ 189 (289)
T 2cvz_A 120 TSGAEAG---TLTVMLGGP-----EEAVERVRPFL-AYAK-KVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQ 189 (289)
T ss_dssp HHHHHHT---CEEEEEESC-----HHHHHHHGGGC-TTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhhC---CeEEEECCC-----HHHHHHHHHHH-hhcC-CeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3211111 113556653 78889999999 8742 235667889999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCC-------CCC-ccc--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHHH
Q 011654 241 GADVTQVSHAIGKDTR-------IGP-RFL--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIKV 302 (480)
Q Consensus 241 Gid~~~v~~~~~~~~~-------~~~-~~~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
|+|.+++.+++..... .++ .++ ...+|+...++.||+.++++.++++|++ .++.+++.+.
T Consensus 190 G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~~~ 259 (289)
T 2cvz_A 190 GVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEKAP--SPLLRLAREV 259 (289)
T ss_dssp TCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCC--CHHHHHHHHH
T ss_pred CcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 9999999999876431 111 122 2346778889999999999999999998 6666554443
No 33
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.9e-22 Score=211.12 Aligned_cols=251 Identities=11% Similarity=0.073 Sum_probs=187.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc---
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
.+|+|||+|.||.+||..|+++ |++|++||+++++++.++++..+ + .+++.+++++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----~----------~gi~~~~s~~e~v~~l~~ 74 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAK----G----------KSIIGATSIEDFISKLKR 74 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTT----T----------SSEECCSSHHHHHHTSCS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHccccc----C----------CCeEEeCCHHHHHhcCCC
Confidence 4799999999999999999998 99999999999999998863211 0 247778899887776
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..++++++++.+.++++++||+.||..+.+++++.+.+++.+ +.++.+|..
T Consensus 75 aDvVil~Vp~~--------------~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g----~~~v~~pVs 136 (497)
T 2p4q_A 75 PRKVMLLVKAG--------------APVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKG----ILFVGSGVS 136 (497)
T ss_dssp SCEEEECCCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEEEEEE
T ss_pred CCEEEEEcCCh--------------HHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcC----CceeCCCcc
Confidence 99999999864 246788899999999999999999998888888877777643 222344544
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCC------eEEeCChhHHHHhhhHHhHHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPED------RIITTNLWSAELSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
..+..+.. .+.+++|++ +++.+.++++|+.++. . .++.+..+.+.++|+++|.+.+..+++++|
T Consensus 137 gg~~~a~~----G~~im~gg~-----~e~~~~v~~ll~~~g~-~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laE 206 (497)
T 2p4q_A 137 GGEEGARY----GPSLMPGGS-----EEAWPHIKNIFQSISA-KSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICE 206 (497)
T ss_dssp SHHHHHHH----CCEEEEEEC-----GGGHHHHHHHHHHHSC-EETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHhhc----CCeEEecCC-----HHHHHHHHHHHHHhcC-ccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 43322221 225778875 6789999999999863 2 245566889999999999999999999999
Q ss_pred HHHHHHH-hCCCHHHHHHHhc---CCCCCCC------c-cc--cCCCCCcccchh-----hhHH-HHHHHHHHcCCchhh
Q 011654 233 MSALCEA-TGADVTQVSHAIG---KDTRIGP------R-FL--NSSVGFGGSCFQ-----KDIL-NLVYICECNGLTEVA 293 (480)
Q Consensus 233 ~~~l~~~-~Gid~~~v~~~~~---~~~~~~~------~-~~--~pg~g~gg~cl~-----kD~~-~l~~~a~~~g~~~~~ 293 (480)
+..++++ +|+|++++.+++. ....-++ . +. .+..++-...+. ||+. .....+++.|++ .
T Consensus 207 a~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~--~ 284 (497)
T 2p4q_A 207 AYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMP--V 284 (497)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCC--C
T ss_pred HHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCC--C
Confidence 9999999 6999999998883 2211000 0 01 111123444444 7765 567899999998 5
Q ss_pred hHHHH
Q 011654 294 NYWKQ 298 (480)
Q Consensus 294 ~~~~~ 298 (480)
+++..
T Consensus 285 P~~~~ 289 (497)
T 2p4q_A 285 TLIGE 289 (497)
T ss_dssp HHHHH
T ss_pred chHHH
Confidence 55554
No 34
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.87 E-value=5.5e-21 Score=201.20 Aligned_cols=249 Identities=11% Similarity=0.099 Sum_probs=182.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc---c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA---E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~---~ 78 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.++++..+ + .++..+++++++++ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----g----------~gi~~~~~~~e~v~~l~~ 66 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK----G----------TKVLGAHSLEEMVSKLKK 66 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT----T----------SSCEECSSHHHHHHHBCS
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcccc----C----------CCeEEeCCHHHHHhhccC
Confidence 7899999999999999999998 99999999999999998863211 1 13667888888764 8
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++.+ +.++.+|..
T Consensus 67 aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g----~~~v~~pv~ 128 (482)
T 2pgd_A 67 PRRIILLVKAG--------------QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKG----ILFVGSGVS 128 (482)
T ss_dssp SCEEEECSCTT--------------HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEEEEEE
T ss_pred CCEEEEeCCCh--------------HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEeCCCCC
Confidence 99999999864 235778889999999999999988887777777777776643 223345544
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCe-------EEeCChhHHHHhhhHHhHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDR-------IITTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~-------v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..+..+. .++.+++|++ ++..+.++++|+.++. .. .+.+..+.+.++|+++|.+.+..+.+++
T Consensus 129 g~~~~a~----~g~~i~~gg~-----~e~~~~v~~ll~~~g~-~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~ 198 (482)
T 2pgd_A 129 GGEDGAR----YGPSLMPGGN-----KEAWPHIKAIFQGIAA-KVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLIC 198 (482)
T ss_dssp SHHHHHH----HCCEEEEEEC-----TTTHHHHHHHHHHHSC-BCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhc----cCCeEEeCCC-----HHHHHHHHHHHHHhhh-hccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3332221 2225677875 5678899999998853 22 3445678899999999999999999999
Q ss_pred HHHHHHHHh-CCCHHHHHHHhc---CCCCCCCc-------ccc---CCCCCcccch------hhhHHHHHHHHHHcCCch
Q 011654 232 AMSALCEAT-GADVTQVSHAIG---KDTRIGPR-------FLN---SSVGFGGSCF------QKDILNLVYICECNGLTE 291 (480)
Q Consensus 232 E~~~l~~~~-Gid~~~v~~~~~---~~~~~~~~-------~~~---pg~g~gg~cl------~kD~~~l~~~a~~~g~~~ 291 (480)
|+..++++. |++.+++.+++. ... .++. .+. +++++...-+ .+|...+...|+++|++
T Consensus 199 Ea~~l~~~~~G~~~~~~~~~~~~w~~g~-~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~- 276 (482)
T 2pgd_A 199 EAYHLMKDVLGLGHKEMAKAFEEWNKTE-LDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVP- 276 (482)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHhcCCC-cCchHHHHHhHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCC-
Confidence 999999999 999999999884 221 1110 111 1112211111 24456788999999998
Q ss_pred hhhHHH
Q 011654 292 VANYWK 297 (480)
Q Consensus 292 ~~~~~~ 297 (480)
.+++.
T Consensus 277 -~P~i~ 281 (482)
T 2pgd_A 277 -VTLIG 281 (482)
T ss_dssp -CHHHH
T ss_pred -cchHH
Confidence 56553
No 35
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.87 E-value=1.6e-20 Score=197.26 Aligned_cols=254 Identities=15% Similarity=0.104 Sum_probs=183.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC-CCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc--
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD-QLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE-- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~-- 78 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.+++. ... +. ..++..+++++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~---~~---------~~~i~~~~~~~e~v~~l~ 67 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASA---PF---------AGNLKAFETMEAFAASLK 67 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTS---TT---------GGGEEECSCHHHHHHHBC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCC---CC---------CCCeEEECCHHHHHhccc
Confidence 7999999999999999999998 99999999999999988752 111 10 0236788899887764
Q ss_pred -CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 79 -ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 79 -aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++.+ . .++.+|.
T Consensus 68 ~aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g--~--~~v~~pv 129 (478)
T 1pgj_A 68 KPRKALILVQAG--------------AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAG--L--RFLGMGI 129 (478)
T ss_dssp SSCEEEECCCCS--------------HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTT--C--EEEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCC--C--eEEEeec
Confidence 99999999864 235778889999999999999988887777777777776543 1 2223443
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCC------eEEeCChhHHHHhhhHHhHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPED------RIITTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
...+..+. ..+.+++|+. ++..+.++++|+.++... .++.++.+.+.++|+++|.+.+..+++++
T Consensus 130 ~gg~~~a~----~g~~i~~gg~-----~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~ 200 (478)
T 1pgj_A 130 SGGEEGAR----KGPAFFPGGT-----LSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWG 200 (478)
T ss_dssp ESHHHHHH----HCCEEEEEEC-----HHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHh----cCCeEeccCC-----HHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHH
Confidence 32221111 1124777875 788999999999886310 34556788999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHhc----CCCC------CCCccc-cCC-CC-Ccccchh-----hhH-HHHHHHHHHcCCchh
Q 011654 232 AMSALCEATGADVTQVSHAIG----KDTR------IGPRFL-NSS-VG-FGGSCFQ-----KDI-LNLVYICECNGLTEV 292 (480)
Q Consensus 232 E~~~l~~~~Gid~~~v~~~~~----~~~~------~~~~~~-~pg-~g-~gg~cl~-----kD~-~~l~~~a~~~g~~~~ 292 (480)
|+..+++++|++.+++.+++. .+.. +....+ .-. .| +-...+. ||+ ..+...|+++|++
T Consensus 201 Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~-- 278 (478)
T 1pgj_A 201 EVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVP-- 278 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCC--
Confidence 999999999999999998875 2211 000111 111 12 2222222 454 5889999999998
Q ss_pred hhHHHH
Q 011654 293 ANYWKQ 298 (480)
Q Consensus 293 ~~~~~~ 298 (480)
.+++++
T Consensus 279 ~Pi~~~ 284 (478)
T 1pgj_A 279 APSLNM 284 (478)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 677766
No 36
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.86 E-value=6.3e-21 Score=200.26 Aligned_cols=251 Identities=10% Similarity=0.102 Sum_probs=185.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc---
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
|+|+|||+|.||.+||..|+++ |++|++||+++++++.+++... ..+++.++++++++++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~---------------~~gi~~~~s~~e~v~~l~~ 78 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENP---------------GKKLVPYYTVKEFVESLET 78 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHST---------------TSCEEECSSHHHHHHTBCS
T ss_pred CeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCC---------------CCCeEEeCCHHHHHhCCCC
Confidence 6899999999999999999998 9999999999999998875210 0147788899888776
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++. .++++++++.+.++++++||+.|+..+..++++.+.+++.+ +.++.+|..
T Consensus 79 aDvVil~Vp~~~--------------~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g----~~~v~~pv~ 140 (480)
T 2zyd_A 79 PRRILLMVKAGA--------------GTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEG----FNFIGTGVS 140 (480)
T ss_dssp SCEEEECSCSSS--------------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEEEEEE
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCC----CCeeCCccc
Confidence 999999998642 35778889999999999999999988888777877777643 223345654
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCC-------eEEeCChhHHHHhhhHHhHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPED-------RIITTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~-------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
.++..+... + .+++|++ ++..+.++++|+.++. . ..+.+..+.+.++|+++|.+.+..+..++
T Consensus 141 gg~~~a~~g---~-~i~~gg~-----~~~~~~v~~ll~~~g~-~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~la 210 (480)
T 2zyd_A 141 GGEEGALKG---P-SIMPGGQ-----KEAYELVAPILTKIAA-VAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIA 210 (480)
T ss_dssp SHHHHHHHC---C-EEEEESC-----HHHHHHHHHHHHHHSC-BCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHhHHhcC---C-eEEecCC-----HHHHHHHHHHHHHHhc-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHH
Confidence 444322211 2 5778875 7899999999999863 2 34566789999999999999999999999
Q ss_pred HHHHHHHH-hCCCHHHHHHHhc------CCCCC----CCccc--cCCCCCcccchh-----hhHH-HHHHHHHHcCCchh
Q 011654 232 AMSALCEA-TGADVTQVSHAIG------KDTRI----GPRFL--NSSVGFGGSCFQ-----KDIL-NLVYICECNGLTEV 292 (480)
Q Consensus 232 E~~~l~~~-~Gid~~~v~~~~~------~~~~~----~~~~~--~pg~g~gg~cl~-----kD~~-~l~~~a~~~g~~~~ 292 (480)
|+..++++ +|+|++++.+++. .++.+ +..+. +++.|+...-+. ||.. .....+++.|++
T Consensus 211 Ea~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~-- 288 (480)
T 2zyd_A 211 EAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP-- 288 (480)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCC--
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCCC--
Confidence 99999999 7999999998872 12110 00000 122223222222 4433 667889999998
Q ss_pred hhHHHHH
Q 011654 293 ANYWKQV 299 (480)
Q Consensus 293 ~~~~~~~ 299 (480)
.++...+
T Consensus 289 ~Pi~~~a 295 (480)
T 2zyd_A 289 LSLITES 295 (480)
T ss_dssp CHHHHHH
T ss_pred CchHHHH
Confidence 5655543
No 37
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.86 E-value=4.7e-21 Score=186.00 Aligned_cols=232 Identities=13% Similarity=0.106 Sum_probs=164.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDI--SVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+++ |++|++||+ ++++++.+.+. +++ ++++++++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~-------------------g~~--~~~~~~~~~a 57 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTV-------------------GVT--ETSEEDVYSC 57 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHH-------------------TCE--ECCHHHHHTS
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHC-------------------CCc--CCHHHHHhcC
Confidence 7999999999999999999998 999999999 77877766531 233 5667778999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||++.. ...+.++.+.+++ +|++.||+.+.+.+.+.+.+.+.+ ++.+|...
T Consensus 58 Dvvi~~v~~~~~---------------~~~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g------~~~~~v~~ 114 (264)
T 1i36_A 58 PVVISAVTPGVA---------------LGAARRAGRHVRG--IYVDINNISPETVRMASSLIEKGG------FVDAAIMG 114 (264)
T ss_dssp SEEEECSCGGGH---------------HHHHHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE------EEEEEECS
T ss_pred CEEEEECCCHHH---------------HHHHHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC------eeeeeeeC
Confidence 999999986421 1223567777765 888889998888888877665431 12233222
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCC-hhHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTN-LWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
.+..+... .. +++|++ +. +.+++ |+.++. ..++..+ ++.+++.|++.|.+....+++++|+..+++
T Consensus 115 ~~~~~~~g---~~-~~~~g~----~~---~~~~~-l~~~g~-~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~ 181 (264)
T 1i36_A 115 SVRRKGAD---IR-IIASGR----DA---EEFMK-LNRYGL-NIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAH 181 (264)
T ss_dssp CHHHHGGG---CE-EEEEST----TH---HHHHG-GGGGTC-EEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccC---Ce-EEecCC----cH---HHhhh-HHHcCC-eeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111111 12 567775 22 67888 998853 2344454 899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCCcc-------c--cCCCCCcccchhhhHHHHHHHHHHcCCchhhhHHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTRIGPRF-------L--NSSVGFGGSCFQKDILNLVYICECNGLTEVANYWKQVIK 301 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~~~-------~--~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++|+|.+ +++.+.... +..+ + ...+|+. +.||+.++.+.+++. ++ .++.+++.+
T Consensus 182 ~~G~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~--~p~~~~v~~ 244 (264)
T 1i36_A 182 RLGLEED-VLEMLEYTE--GNDFRESAISRLKSSCIHARR---RYEEMKEVQDMLAEV-ID--PVMPTCIIR 244 (264)
T ss_dssp HTTCHHH-HHHHHHTTS--CSSTHHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT-SC--CSHHHHHHH
T ss_pred HcCCcHH-HHHHHHHhc--CccHHHHHHHHhcCCCCcchh---hHHHHHHHHHHHHHh-cC--chHHHHHHH
Confidence 9999986 777776542 1111 1 1123333 679999999999999 88 566655443
No 38
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.86 E-value=1.4e-20 Score=188.72 Aligned_cols=275 Identities=14% Similarity=0.118 Sum_probs=190.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEec--CHHHHhc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDI--SVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFST--DIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~--d~~~a~~ 77 (480)
|||+|||+|.||.++|..|+++ |++|++||+ ++++++.+++....+.. +.. . .++.+++ +++++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~-g~~------~-~~~~~~~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRL-GVK------L-NGVEIFWPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTT-TBC------C-CSEEEECGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCccc-Ccc------c-cceEEecHHhHHHHHh
Confidence 7999999999999999999998 999999999 99999999875321111 110 0 2456777 8878789
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec-CC---ccchHHHHHHHHHhcCCC-CceeE
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS-TV---PVKTAEAIEKILTHNSRE-IKYQI 152 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv---~~gt~~~l~~~l~~~~~g-~~~~v 152 (480)
++|+||+|||++ .+.++++++.+ ++++++|+..+ ++ ++++.+.+.+.+.+..++ ..+.+
T Consensus 71 ~~D~vi~~v~~~---------------~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~ 134 (335)
T 1txg_A 71 NAEVVLLGVSTD---------------GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVA 134 (335)
T ss_dssp TCSEEEECSCGG---------------GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEE
T ss_pred cCCEEEEcCChH---------------HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEE
Confidence 999999999853 24678888988 88899888776 66 777777788777653111 13455
Q ss_pred eeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHh-----------------
Q 011654 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELS----------------- 215 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~----------------- 215 (480)
..+|.....+.. ..+..+++|+. +++..+.++++|+..+. ..++..|+..++|.
T Consensus 135 ~~~p~~~~~~~~----g~~~~~~~~~~----~~~~~~~~~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~ 205 (335)
T 1txg_A 135 ITGPAIAREVAK----RMPTTVVFSSP----SESSANKMKEIFETEYF-GVEVTTDIIGTEITSALKNVYSIAIAWIRGY 205 (335)
T ss_dssp EESSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHc----cCCcEEEEEeC----CHHHHHHHHHHhCCCcE-EEEecCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567765443211 12234667765 47788999999998642 23456788888886
Q ss_pred hhH-----HhHHHHHHHHHHHHHHHHHHHhCCCHHHHH------HHhcCCCCCCCcc-c--cCCCCCcc----------c
Q 011654 216 KLA-----ANAFLAQRISSVNAMSALCEATGADVTQVS------HAIGKDTRIGPRF-L--NSSVGFGG----------S 271 (480)
Q Consensus 216 Kl~-----~N~~~~~~ia~~nE~~~l~~~~Gid~~~v~------~~~~~~~~~~~~~-~--~pg~g~gg----------~ 271 (480)
|+. +|.++++..++++|+..+|+++|+|+.++. +.+.+... +.+. + ..+.|+.. .
T Consensus 206 ~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~~~~~~~ 284 (335)
T 1txg_A 206 ESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGMLGELLGKGLSIDEAMEELERRG 284 (335)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccHHHHHHHhCCCCHHHHHHHhccCC
Confidence 555 777888899999999999999999987654 33322110 0010 0 11222311 1
Q ss_pred -chh---hhHHHHHHHHHHcCCchhhhHHHHHHHHHHH--hHHHHHHHH
Q 011654 272 -CFQ---KDILNLVYICECNGLTEVANYWKQVIKVNDY--QKNRFVNRI 314 (480)
Q Consensus 272 -cl~---kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~ 314 (480)
+.. ||..+++++++++|++ .++.+.+.+.... .|...++.+
T Consensus 285 ~~~~E~~~~~~~~~~~a~~~gv~--~P~~~~~~~~~~~~~~~~~~~~~l 331 (335)
T 1txg_A 285 VGVVEGYKTAEKAYRLSSKINAD--TKLLDSIYRVLYEGLKVEEVLFEL 331 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred ceecchHHHHHHHHHHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHH
Confidence 333 9999999999999998 7777777665543 444444443
No 39
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.86 E-value=3.3e-21 Score=196.88 Aligned_cols=268 Identities=15% Similarity=0.151 Sum_probs=185.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC-------CeEEEEeCCHH-----HHHHHHCC-CCCCCCCChHHHHHhhcCCCEE
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK-------IEVAVVDISVS-----RIAAWNGD-QLPIYEPGLEDVVTQCRGRNLF 67 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G-------~~V~~~D~~~~-----~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l~ 67 (480)
||||+|||+|.||+++|..|+++ | ++|++||++++ +++.+++. ....+.++.. ...++.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~i~ 92 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVP------LPHNIV 92 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCB------CCTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCccc------CcCCeE
Confidence 47999999999999999999998 8 99999999998 88888753 3333333321 123578
Q ss_pred EecCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHh----hCCCCCEEEEec-CCcc--chHHHHHHH
Q 011654 68 FSTDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIAN----VSNSNKIVVEKS-TVPV--KTAEAIEKI 140 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~----~l~~~~iVi~~S-Tv~~--gt~~~l~~~ 140 (480)
++++++++++++|+||+|||+ ..++++++++.+ .++++++|+..+ ++.+ ++.+.+.+.
T Consensus 93 ~~~~~~ea~~~aDvVilav~~---------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~ 157 (375)
T 1yj8_A 93 AHSDLASVINDADLLIFIVPC---------------QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNY 157 (375)
T ss_dssp EESSTHHHHTTCSEEEECCCH---------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHH
T ss_pred EECCHHHHHcCCCEEEEcCCH---------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHH
Confidence 889998888999999999984 246888899988 888899888776 4566 344455555
Q ss_pred HHhcCCCCceeEeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhH--
Q 011654 141 LTHNSREIKYQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLA-- 218 (480)
Q Consensus 141 l~~~~~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~-- 218 (480)
+++.. +.++.+..+|.+..+... ..+..+++++. +++..+.++++|+..+. ..+...|+..++|.|++
T Consensus 158 l~~~~-~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~l~N 227 (375)
T 1yj8_A 158 ISDFL-NIPCSALSGANIAMDVAM----ENFSEATIGGN----DKDSLVIWQRVFDLPYF-KINCVNETIEVEICGALKN 227 (375)
T ss_dssp HHHHS-SSCEEEEECSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCSHHHHHHHHHHH
T ss_pred HHHHc-CCCEEEEeCCchHHHHHh----CCCeEEEEecC----CHHHHHHHHHHhCCCCe-EEEEeCCcHHHHHHHHHHH
Confidence 55433 134566677776543211 12223455654 47788999999998641 23455788888887665
Q ss_pred ---------------HhHHHHHHHHHHHHHHHHHHHh--CCCHHHHHHHhc--------CCCC---CCCccccCC--CCC
Q 011654 219 ---------------ANAFLAQRISSVNAMSALCEAT--GADVTQVSHAIG--------KDTR---IGPRFLNSS--VGF 268 (480)
Q Consensus 219 ---------------~N~~~~~~ia~~nE~~~l~~~~--Gid~~~v~~~~~--------~~~~---~~~~~~~pg--~g~ 268 (480)
+|.+.++.+++++|+..+|++. |+|++++.++.+ ..++ ++..+..+| ..+
T Consensus 228 ~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~~~~~~~~~g~~~~~ 307 (375)
T 1yj8_A 228 IITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAKCSAEFIKSTPKKTW 307 (375)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHHHHHHHHhcCCCCCH
Confidence 5668889999999999999999 699876643211 1111 111111101 111
Q ss_pred c--------ccch--hhhHHHHHHHHHHcCC--chhhhHHHHHHHHH
Q 011654 269 G--------GSCF--QKDILNLVYICECNGL--TEVANYWKQVIKVN 303 (480)
Q Consensus 269 g--------g~cl--~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N 303 (480)
. |.+. .+|..++.++++++|+ + .++.+.+.++.
T Consensus 308 ~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv~~~--~P~~~~v~~~~ 352 (375)
T 1yj8_A 308 EELENEILKGQKLQGTVTLKYVYHMIKEKNMTNE--FPLFTVLHKIS 352 (375)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCGGG--CHHHHHHHHHH
T ss_pred HHHHHhhcCCcEeeHHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHH
Confidence 1 4554 7899999999999999 7 67777666554
No 40
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.86 E-value=3.3e-20 Score=194.93 Aligned_cols=251 Identities=10% Similarity=0.121 Sum_probs=182.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc---
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.+.+... ..++..+++++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~---------------~~gi~~~~s~~e~v~~l~~ 68 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQ---------------DKNLVFTKTLEEFVGSLEK 68 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTT---------------TSCEEECSSHHHHHHTBCS
T ss_pred CcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCc---------------CCCeEEeCCHHHHHhhccC
Confidence 6899999999999999999998 9999999999999988875210 0147778899887776
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++.+ +.++.+|..
T Consensus 69 aDvVilavp~~--------------~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g----~~~v~~pv~ 130 (474)
T 2iz1_A 69 PRRIMLMVQAG--------------AATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSG----INFIGTGVS 130 (474)
T ss_dssp SCEEEECCCTT--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSS----CEEEEEEEC
T ss_pred CCEEEEEccCc--------------hHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCC----CeEECCCCC
Confidence 99999999864 235778889999999999999988887777777766665432 233345554
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCC-------eEEeCChhHHHHhhhHHhHHHHHHHHHHH
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPED-------RIITTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~-------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..+..+... + .+++|++ ++..+.++++|+.++... ..+.++.+.+.++|+++|.+.+..+.+++
T Consensus 131 gg~~~a~~g---~-~i~~gg~-----~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~la 201 (474)
T 2iz1_A 131 GGEKGALLG---P-SMMPGGQ-----KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIA 201 (474)
T ss_dssp SHHHHHHHC---C-CEEEEEC-----HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhccC---C-eEEecCC-----HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHH
Confidence 333222211 1 3677874 788999999999986320 24556789999999999999999999999
Q ss_pred HHHHHHHH-hCCCHHHHHHHhc---CCC---CC---CCc-cc--cCCCC-Ccccch-----hhhHH-HHHHHHHHcCCch
Q 011654 232 AMSALCEA-TGADVTQVSHAIG---KDT---RI---GPR-FL--NSSVG-FGGSCF-----QKDIL-NLVYICECNGLTE 291 (480)
Q Consensus 232 E~~~l~~~-~Gid~~~v~~~~~---~~~---~~---~~~-~~--~pg~g-~gg~cl-----~kD~~-~l~~~a~~~g~~~ 291 (480)
|+..++++ +|++.+++.+++. ... .. ... +. +..+| +-..-+ .||.. .....++++|++
T Consensus 202 Ea~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~- 280 (474)
T 2iz1_A 202 ESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVP- 280 (474)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHcCCC-
Confidence 99999999 8999999988873 221 00 001 11 12222 222211 26665 567889999998
Q ss_pred hhhHHHH
Q 011654 292 VANYWKQ 298 (480)
Q Consensus 292 ~~~~~~~ 298 (480)
.+++..
T Consensus 281 -~P~~~~ 286 (474)
T 2iz1_A 281 -LPLITE 286 (474)
T ss_dssp -CHHHHH
T ss_pred -CchHHH
Confidence 565554
No 41
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.85 E-value=2e-21 Score=197.74 Aligned_cols=279 Identities=16% Similarity=0.165 Sum_probs=189.7
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC-CCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD-QLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
||+|||+|.||.++|..|+++ ||+|++||+++++++.+++. ....+.++.. ...+++++++++++++++|+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~aDv 88 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQ------LASNITFTSDVEKAYNGAEI 88 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCB------CCTTEEEESCHHHHHTTCSS
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccc------cccceeeeCCHHHHHcCCCE
Confidence 999999999999999999988 99999999999999988763 2222333321 12357888899888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHH----HHhhCCC-CCEEEEec-CCccchHHHHHHHHHhcCCCCceeEeeC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARM----IANVSNS-NKIVVEKS-TVPVKTAEAIEKILTHNSREIKYQILSN 155 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~----i~~~l~~-~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
||+|||+ ..+.+++++ +.+.+++ +++|+..+ ++.+++.+.+.+.+.+..+...+.+..+
T Consensus 89 Vilav~~---------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~g 153 (366)
T 1evy_A 89 ILFVIPT---------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAG 153 (366)
T ss_dssp EEECCCH---------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEES
T ss_pred EEECCCh---------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeC
Confidence 9999984 235778887 8888887 88888776 6777766666666665422123456677
Q ss_pred CccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhcc--CCCCeEEeCChhHHHHhhhH---------------
Q 011654 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHW--VPEDRIITTNLWSAELSKLA--------------- 218 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~--~~~~~v~~~~~~~ae~~Kl~--------------- 218 (480)
|.+..+... ..+..+++++. +++..+.++++|+.. .- ..+...|+...++.|++
T Consensus 154 p~~~~~~~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~g~-~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~ 224 (366)
T 1evy_A 154 PSFAIEVAT----GVFTCVSIASA----DINVARRLQRIMSTGDRSF-VCWATTDTVGCEVASAVKNVLAIGSGVANGLG 224 (366)
T ss_dssp SCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHSCTTSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHh----CCceEEEEecC----CHHHHHHHHHHhcCCCCeE-EEEEcCCchHHHHHHHHHhHHHHHHHHHhhcc
Confidence 776542111 11223455654 467889999999986 42 23445677777776654
Q ss_pred --HhHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc--------CCC--C---CCCccccCCCCCc------ccch--hh
Q 011654 219 --ANAFLAQRISSVNAMSALCEATGADVTQVSHAIG--------KDT--R---IGPRFLNSSVGFG------GSCF--QK 275 (480)
Q Consensus 219 --~N~~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~--------~~~--~---~~~~~~~pg~g~g------g~cl--~k 275 (480)
+|.+.++.+++++|+..+|++.|+|++++.++.+ ..+ + ++..+.. |..+. +.|. .|
T Consensus 225 ~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~e~~~ 303 (366)
T 1evy_A 225 MGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGK-GLPIEEIQRTSKAVAEGVA 303 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHT-TCCHHHHHC---CCCHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhC-CCCHHHHHHHcCCeeehHH
Confidence 5667888999999999999999999866543211 011 0 0001101 11111 2232 59
Q ss_pred hHHHHHHHHHHcCCchhhhHHHHHHHHHHH--hHHHHHHHHHH
Q 011654 276 DILNLVYICECNGLTEVANYWKQVIKVNDY--QKNRFVNRIVS 316 (480)
Q Consensus 276 D~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~~~ 316 (480)
|..++.++++++|++ .++.+.+.+.... .|...++.+++
T Consensus 304 ~~~~v~~~a~~~gv~--~P~~~~v~~~~~~~~~~~~~~~~l~~ 344 (366)
T 1evy_A 304 TADPLMRLAKQLKVK--MPLCHQIYEIVYKKKNPRDALADLLS 344 (366)
T ss_dssp HHHHHHHHHHHHTCC--CHHHHHHHHHHHSCCCHHHHHHHHGG
T ss_pred HHHHHHHHHHHhCCC--CcHHHHHHHHHHCCCCHHHHHHHHHc
Confidence 999999999999998 7887777765543 56666665543
No 42
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.84 E-value=1.4e-20 Score=190.34 Aligned_cols=266 Identities=16% Similarity=0.157 Sum_probs=180.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCC-------CeEEEEeCCHH-----HHHHHHCC-CCCCCCCChHHHHHhhcCCCEEE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPK-------IEVAVVDISVS-----RIAAWNGD-QLPIYEPGLEDVVTQCRGRNLFF 68 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G-------~~V~~~D~~~~-----~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l~~ 68 (480)
|||+|||+|.||.++|..|+++ | ++|++||++++ +.+.+++. ....+.++.. ...++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~ 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHK------LPPNVVA 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCC------CCTTEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCccc------CccCeEE
Confidence 7999999999999999999998 8 99999999998 88888753 2222222211 1235788
Q ss_pred ecCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-Cc--cchHHHHHHHHHhcC
Q 011654 69 STDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VP--VKTAEAIEKILTHNS 145 (480)
Q Consensus 69 t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~--~gt~~~l~~~l~~~~ 145 (480)
+++++++++++|+||+|||+. .+.++++++.++++++++|+..++ +. |++.+.+.+.+++..
T Consensus 81 ~~~~~~~~~~aD~Vilav~~~---------------~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~ 145 (354)
T 1x0v_A 81 VPDVVQAAEDADILIFVVPHQ---------------FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERL 145 (354)
T ss_dssp ESSHHHHHTTCSEEEECCCGG---------------GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHH
T ss_pred EcCHHHHHcCCCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHc
Confidence 889988889999999999852 257888999999998998887765 44 454444555554432
Q ss_pred CCCceeEeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhH-------
Q 011654 146 REIKYQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLA------- 218 (480)
Q Consensus 146 ~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~------- 218 (480)
+.++.+..+|.+..+... ..+..+++++. +++..+.++++|+..+. ..++..|+..++|.|++
T Consensus 146 -~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~ 215 (354)
T 1x0v_A 146 -GIPMSVLMGANIASEVAD----EKFCETTIGCK----DPAQGQLLKELMQTPNF-RITVVQEVDTVEICGALKNVVAVG 215 (354)
T ss_dssp -TCCEEEEECSCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCcHHHHHh----cCCceEEEEEC----CHHHHHHHHHHhCCCCE-EEEEcCCchHhHHHHHHHHHHHHH
Confidence 124556677776543111 12223555654 47788999999998642 23445788888888776
Q ss_pred ----------HhHHHHHHHHHHHHHHHHHHHhCC---CHHHHHHHh------cC--CCC---CCCccccCCCCCc-----
Q 011654 219 ----------ANAFLAQRISSVNAMSALCEATGA---DVTQVSHAI------GK--DTR---IGPRFLNSSVGFG----- 269 (480)
Q Consensus 219 ----------~N~~~~~~ia~~nE~~~l~~~~Gi---d~~~v~~~~------~~--~~~---~~~~~~~pg~g~g----- 269 (480)
+|.+.++...+++|+..+|++.|+ +++++.++. .+ ..+ ++..+...|..+.
T Consensus 216 ~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (354)
T 1x0v_A 216 AGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEAFARTGKSIEQLEKE 295 (354)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcccccHHHHHHHHhcCCCHHHHHHh
Confidence 667888999999999999999999 876653221 10 011 1111111111111
Q ss_pred ---ccch--hhhHHHHHHHHHHcCC--chhhhHHHHHHHH
Q 011654 270 ---GSCF--QKDILNLVYICECNGL--TEVANYWKQVIKV 302 (480)
Q Consensus 270 ---g~cl--~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~ 302 (480)
|.+. .+|..++.++++++|+ + .++.+.+.+.
T Consensus 296 ~~~g~~~E~~~~~g~v~~~a~~~gv~~~--~P~~~~v~~~ 333 (354)
T 1x0v_A 296 LLNGQKLQGPETARELYSILQHKGLVDK--FPLFMAVYKV 333 (354)
T ss_dssp HSTTCCCHHHHHHHHHHHHHHHHTCGGG--SHHHHHHHHH
T ss_pred hcCCcEeehHHHHHHHHHHHHHhCCCCC--CCHHHHHHHH
Confidence 3333 6888899999999999 7 6766655544
No 43
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.83 E-value=3.6e-20 Score=186.21 Aligned_cols=257 Identities=16% Similarity=0.173 Sum_probs=174.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||+++|..|+++ |++|++||+++++++.+++.....++++.. .++++++++++ ++++|+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~--------~~~~~~~~~~~-~~~aDv 83 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESK--------ITVRATNDLEE-IKKEDI 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCC--------CCSEEESCGGG-CCTTEE
T ss_pred CcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCe--------eeEEEeCCHHH-hcCCCE
Confidence 7999999999999999999998 999999999999999998643211333331 14677888888 889999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec-CCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS-TVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
||+|||++ .++++++++.+ ++++||..+ ++.+.+.+.+.+.+.+..+ .++.+..+|.+..
T Consensus 84 Vil~vk~~---------------~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~ 144 (335)
T 1z82_A 84 LVIAIPVQ---------------YIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAE 144 (335)
T ss_dssp EEECSCGG---------------GHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHH
T ss_pred EEEECCHH---------------HHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHH
Confidence 99999842 24666665544 678888777 5777666667666655432 3455666776654
Q ss_pred ccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHH-----------------hHHH
Q 011654 161 EGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAA-----------------NAFL 223 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~-----------------N~~~ 223 (480)
+... ..+..+++|+. + .+.++++|+..+. ...+..|+...+|.|++. |.++
T Consensus 145 ~~~~----g~~~~~~~g~~-----~--~~~~~~ll~~~g~-~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~ 212 (335)
T 1z82_A 145 EVAK----KLPTAVTLAGE-----N--SKELQKRISTEYF-RVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKA 212 (335)
T ss_dssp HHHT----TCCEEEEEEET-----T--HHHHHHHHCCSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHhC----CCceEEEEEeh-----h--HHHHHHHhCCCCE-EEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHH
Confidence 3211 11224556654 2 6789999998642 234456877777765554 5566
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHhcC--------CC--C---CCCccccCCCCCc------ccch--hhhHHHHHH
Q 011654 224 AQRISSVNAMSALCEATGADVTQVSHAIGK--------DT--R---IGPRFLNSSVGFG------GSCF--QKDILNLVY 282 (480)
Q Consensus 224 ~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~--------~~--~---~~~~~~~pg~g~g------g~cl--~kD~~~l~~ 282 (480)
++...+++|+..++++.|+|++++.++.+. ++ + ++..+.. |..+. |.+. .||..++.+
T Consensus 213 a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~-g~~~~~~~~~~g~~~e~~~~~~~v~~ 291 (335)
T 1z82_A 213 ALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIAR-GFNPLKLLESSNQVVEGAFTVKAVMK 291 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHH-TCCHHHHHHTCSSCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHhC-CCCHHHHHHhcCCeeeHHHHHHHHHH
Confidence 788899999999999999999877553211 11 0 1111111 11111 3333 499999999
Q ss_pred HHHHcCCchhhhHHHHHHHHH
Q 011654 283 ICECNGLTEVANYWKQVIKVN 303 (480)
Q Consensus 283 ~a~~~g~~~~~~~~~~~~~~N 303 (480)
+++++|++ .++.+.+.+..
T Consensus 292 ~a~~~gv~--~P~~~~v~~~~ 310 (335)
T 1z82_A 292 IAKENKID--MPISEEVYRVV 310 (335)
T ss_dssp HHHHTTCC--CHHHHHHHHHH
T ss_pred HHHHhCCC--CcHHHHHHHHH
Confidence 99999998 67777666544
No 44
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.83 E-value=2e-19 Score=178.39 Aligned_cols=266 Identities=13% Similarity=0.080 Sum_probs=170.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh---c
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV---A 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~---~ 77 (480)
||||+|||+|.||.++|..|+++ |++|++||+++++++.+++....+...+- . ...++.++++ .+.. +
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~-----~~~~~~~~~~-~~~~~~~~ 73 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGE-E-----VVANLPIFSP-EEIDHQNE 73 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTE-E-----EEECCCEECG-GGCCTTSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCC-e-----eEecceeecc-hhhcccCC
Confidence 58999999999999999999998 99999999999999988753211110000 0 0012223332 3323 3
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
++|+||+|||++ .+.++++++.++++++++|+..++ ..++.+.+.+.+.+... ..-....+.+
T Consensus 74 ~~d~vi~~v~~~---------------~~~~v~~~l~~~l~~~~~iv~~~~-g~~~~~~l~~~~~~~~v-i~g~~~~~~~ 136 (316)
T 2ew2_A 74 QVDLIIALTKAQ---------------QLDAMFKAIQPMITEKTYVLCLLN-GLGHEDVLEKYVPKENI-LVGITMWTAG 136 (316)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHGGGCCTTCEEEECCS-SSCTHHHHTTTSCGGGE-EEEEECCCCE
T ss_pred CCCEEEEEeccc---------------cHHHHHHHHHHhcCCCCEEEEecC-CCCcHHHHHHHcCCccE-EEEEeeeeeE
Confidence 899999999842 357888999999999998887654 34455555554433210 0001112334
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHH---------------
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAF--------------- 222 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~--------------- 222 (480)
+.+|+...... . ..+.++.. ...+++..+.++++|+..+. ..++..++..++|.|++.|+.
T Consensus 137 ~~~p~~~~~~~-~-g~~~i~~~-~~~~~~~~~~~~~ll~~~g~-~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~ 212 (316)
T 2ew2_A 137 LEGPGRVKLLG-D-GEIELENI-DPSGKKFALEVVDVFQKAGL-NPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEF 212 (316)
T ss_dssp EEETTEEEECS-C-CCEEEEES-SGGGHHHHHHHHHHHHHTTC-CEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHH
T ss_pred EcCCCEEEEec-C-CcEEEeec-CCCccHHHHHHHHHHHhCCC-CcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHH
Confidence 45555543322 1 22334432 11247788999999998753 344557899999999999963
Q ss_pred ------HHHHHHHHHHHHHHHHHhCCCH--HHHHHHhcC--C----CCCCCcc-ccC-CCCCcccchhhhHHHHHHHHHH
Q 011654 223 ------LAQRISSVNAMSALCEATGADV--TQVSHAIGK--D----TRIGPRF-LNS-SVGFGGSCFQKDILNLVYICEC 286 (480)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~Gid~--~~v~~~~~~--~----~~~~~~~-~~p-g~g~gg~cl~kD~~~l~~~a~~ 286 (480)
+.+..+.++|+..+++++|+++ ..+.+.+.. . ++..+.+ ... ..|+--. +.+|..++.+++++
T Consensus 213 ~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~~E-~~~~~~~~~~~a~~ 291 (316)
T 2ew2_A 213 GALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTE-IDYINGAVWRKGQK 291 (316)
T ss_dssp HTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCCCS-GGGTHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCCCcHHHHHHHHcCCcch-HHHHhhHHHHHHHH
Confidence 3677889999999999999986 345554432 1 1111101 111 3344444 78999999999999
Q ss_pred cCCchhhhHHHHH
Q 011654 287 NGLTEVANYWKQV 299 (480)
Q Consensus 287 ~g~~~~~~~~~~~ 299 (480)
+|++ .++.+.+
T Consensus 292 ~gv~--~P~~~~~ 302 (316)
T 2ew2_A 292 YNVA--TPFCAML 302 (316)
T ss_dssp HTCC--CHHHHHH
T ss_pred hCCC--CCHHHHH
Confidence 9998 5655543
No 45
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.78 E-value=1e-18 Score=167.85 Aligned_cols=197 Identities=15% Similarity=0.151 Sum_probs=130.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH--HHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSR--IAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~--v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.+||..|+++ |++|++||+++++ .+...... ....+.++... .+... ++++.+++++|
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~-~~~~~e~~~~a 91 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAM---GAPPFSQWLPE--HPHVH-LAAFADVAAGA 91 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC----------CCHHHHGGG--STTCE-EEEHHHHHHHC
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhh---cchhhhHHHhh--cCcee-ccCHHHHHhcC
Confidence 7999999999999999999998 9999999999987 11100000 00001111111 12233 45677888999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHH-HhhCCCCCEEEEec-----------CCccchHHHHHHHHHhcCCC
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMI-ANVSNSNKIVVEKS-----------TVPVKTAEAIEKILTHNSRE 147 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i-~~~l~~~~iVi~~S-----------Tv~~gt~~~l~~~l~~~~~g 147 (480)
|+||+|||++. +.+++.++ .+.+ ++++||+.| |+.|++...+.+.+++...+
T Consensus 92 DvVilavp~~~---------------~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~ 155 (245)
T 3dtt_A 92 ELVVNATEGAS---------------SIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE 155 (245)
T ss_dssp SEEEECSCGGG---------------HHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT
T ss_pred CEEEEccCcHH---------------HHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC
Confidence 99999998532 24556667 5666 789999998 77777666555555553211
Q ss_pred C----ceeEeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHH
Q 011654 148 I----KYQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFL 223 (480)
Q Consensus 148 ~----~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~ 223 (480)
. .+..+.+|....+..+... +..+++++. +++..+.++++|+.++....++.++.+.|..+|+++|.+.
T Consensus 156 ~~vv~~~~~~~a~v~~~~~~a~~g---~~~~~v~g~----d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~ 228 (245)
T 3dtt_A 156 AKVVKTLNTMNASLMVDPGRAAGG---DHSVFVSGN----DAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWI 228 (245)
T ss_dssp SEEEECSTTSCHHHHHCGGGTGGG---CCCEEEECS----CHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHH
T ss_pred CeEEEeecccCHHHhcCccccCCC---CeeEEEECC----CHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHH
Confidence 0 1223345555444333211 124667776 4889999999999986312467889999999999999999
Q ss_pred HHHHHH
Q 011654 224 AQRISS 229 (480)
Q Consensus 224 ~~~ia~ 229 (480)
.+++++
T Consensus 229 ~l~~~~ 234 (245)
T 3dtt_A 229 RLWGAL 234 (245)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887653
No 46
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.76 E-value=7.3e-17 Score=157.85 Aligned_cols=196 Identities=15% Similarity=0.168 Sum_probs=143.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
||||+|||+|.||.++|..|++. |+ +|++||+++++++.+++... ....+++++++++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~ 61 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI-----------------IDEGTTSIAKVEDF 61 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGGGGT
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCC-----------------cccccCCHHHHhcC
Confidence 68999999999999999999988 88 99999999999887764210 0134567777788
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
++|+||+|||.. .+.++++++.+.++++++|++.+++.+.+.+.+.+.+.+.. ...+-..+++
T Consensus 62 ~aDvVilavp~~---------------~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~--v~~~p~~~~~ 124 (281)
T 2g5c_A 62 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRF--VGGHPIAGTE 124 (281)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGE--ECEEEECCCS
T ss_pred CCCEEEEcCCHH---------------HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccc--eeeccccCCc
Confidence 999999999842 24677888888899999999888887776677777765410 0112233455
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeC-ChhHHHHhhhHHhHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITT-NLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
..+|+.+..+++....+++.. ....+++..+.++++|+.++ ..++.. +....+++|++.|....+.+++++.+..
T Consensus 125 ~~gp~~a~~~l~~g~~~~~~~-~~~~~~~~~~~v~~l~~~~g--~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~ 200 (281)
T 2g5c_A 125 KSGVEYSLDNLYEGKKVILTP-TKKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIH 200 (281)
T ss_dssp CCSGGGCCSSTTTTCEEEECC-CSSSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCChhhhhhHHhCCCCEEEec-CCCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556677766666655444442 11225788999999999985 355554 4566899999999988878888877665
No 47
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.75 E-value=3.5e-17 Score=162.88 Aligned_cols=209 Identities=11% Similarity=0.101 Sum_probs=138.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-h---------cCCCEEEec
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-C---------RGRNLFFST 70 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~---------~~~~l~~t~ 70 (480)
|+||+|||+|.||.+||..|+++ ||+|++||+++++++.+.+... ..++.+... . ..+++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~----~~l~~l~~~G~~~g~~~~~~~~~~i~~~~ 79 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIR----KEMKSLQQSGSLKGSLSAEEQLSLISSCT 79 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHH----HHHHHHHHTTCCCSSSCHHHHHHTEEEEC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH----HHHHHHHHcCccccccchHHHhhceEEeC
Confidence 47899999999999999999998 9999999999999887753100 000111000 0 012588999
Q ss_pred CHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEe-cCCccchHHHHHHHHHhcCCCCc
Q 011654 71 DIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEK-STVPVKTAEAIEKILTHNSREIK 149 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~ 149 (480)
|+++++++||+||+|||+.. ...+.+++++.++++++++|+.. |++++. .+.+.+.... .
T Consensus 80 ~~~eav~~aDlVieavpe~~-------------~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~---~la~~~~~~~---r 140 (319)
T 2dpo_A 80 NLAEAVEGVVHIQECVPENL-------------DLKRKIFAQLDSIVDDRVVLSSSSSCLLPS---KLFTGLAHVK---Q 140 (319)
T ss_dssp CHHHHTTTEEEEEECCCSCH-------------HHHHHHHHHHHTTCCSSSEEEECCSSCCHH---HHHTTCTTGG---G
T ss_pred CHHHHHhcCCEEEEeccCCH-------------HHHHHHHHHHHhhCCCCeEEEEeCCChHHH---HHHHhcCCCC---C
Confidence 99998999999999998532 23467788999999999988643 445442 3333222110 1
Q ss_pred eeEee---CCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHH
Q 011654 150 YQILS---NPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQR 226 (480)
Q Consensus 150 ~~v~~---~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ 226 (480)
| +.. +|....+ +. .+ +.+.. +++++++++.++|+.+++ .++++.....+ .+++|. .
T Consensus 141 ~-ig~Hp~~P~~~~~------lv---ei-v~g~~--t~~e~~~~~~~l~~~lGk-~~v~v~~~~~G---fi~Nrl----l 199 (319)
T 2dpo_A 141 C-IVAHPVNPPYYIP------LV---EL-VPHPE--TSPATVDRTHALMRKIGQ-SPVRVLKEIDG---FVLNRL----Q 199 (319)
T ss_dssp E-EEEEECSSTTTCC------EE---EE-EECTT--CCHHHHHHHHHHHHHTTC-EEEECSSCCTT---TTHHHH----H
T ss_pred e-EEeecCCchhhcc------eE---EE-eCCCC--CCHHHHHHHHHHHHHcCC-EEEEECCCcCC---chHHHH----H
Confidence 1 222 3322211 11 23 44432 268999999999999863 34555322211 134443 3
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHhcCCC
Q 011654 227 ISSVNAMSALCEATGADVTQVSHAIGKDT 255 (480)
Q Consensus 227 ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ 255 (480)
.++++|...++++.++|++++.+++..+.
T Consensus 200 ~a~~~EA~~l~~~g~~~~~~id~a~~~g~ 228 (319)
T 2dpo_A 200 YAIISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 56899999999999999999999998653
No 48
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.73 E-value=1.1e-16 Score=157.18 Aligned_cols=194 Identities=22% Similarity=0.266 Sum_probs=133.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||+|||+|.||.+||.+|+ + |++|++||+++++++.+.+. + .++ ..+++++++|+++ +++||+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~---l----~~~-----~~~~i~~~~~~~~-~~~aDl 76 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQ---I----PEE-----LLSKIEFTTTLEK-VKDCDI 76 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHH---S----CGG-----GGGGEEEESSCTT-GGGCSE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHH---H----HHH-----HhCCeEEeCCHHH-HcCCCE
Confidence 68999999999999999999 8 99999999999998877653 1 011 1136888899876 899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEE-EecCCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVV-EKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
||.|||... ++ -+..+.++.+. ++++++ ++||+++..... .+.....-...+. ++|....
T Consensus 77 Vieavpe~~-----------~v--k~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf-~~Pv~~~ 137 (293)
T 1zej_A 77 VMEAVFEDL-----------NT--KVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHW-MNPPHVM 137 (293)
T ss_dssp EEECCCSCH-----------HH--HHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEE-CSSTTTC
T ss_pred EEEcCcCCH-----------HH--HHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEe-cCccccC
Confidence 999998642 22 23455667665 788874 678888763322 1111000000111 2454322
Q ss_pred ccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHHHHh
Q 011654 161 EGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
+ + ..++++..+ ++++++++.++++.+++ .++++.+. |+++|.+ .++++|...++++
T Consensus 138 ~------l----veiv~g~~t--~~~~~~~~~~l~~~lGk-~~v~v~d~------fi~Nrll----~~~~~EA~~l~~~- 193 (293)
T 1zej_A 138 P------L----VEIVISRFT--DSKTVAFVEGFLRELGK-EVVVCKGQ------SLVNRFN----AAVLSEASRMIEE- 193 (293)
T ss_dssp C------E----EEEEECTTC--CHHHHHHHHHHHHHTTC-EEEEEESS------CHHHHHH----HHHHHHHHHHHHH-
T ss_pred C------E----EEEECCCCC--CHHHHHHHHHHHHHcCC-eEEEeccc------ccHHHHH----HHHHHHHHHHHHh-
Confidence 1 1 123444322 58999999999999863 44556553 7777654 3689999999999
Q ss_pred CCCHHHHHHHhcCC
Q 011654 241 GADVTQVSHAIGKD 254 (480)
Q Consensus 241 Gid~~~v~~~~~~~ 254 (480)
|+|++++.+++...
T Consensus 194 Gv~~e~id~~~~~g 207 (293)
T 1zej_A 194 GVRAEDVDRVWKHH 207 (293)
T ss_dssp TCCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhc
Confidence 88999999999855
No 49
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.73 E-value=5e-16 Score=154.51 Aligned_cols=189 Identities=16% Similarity=0.202 Sum_probs=138.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCE-EEecCHHH-Hh
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNL-FFSTDIEK-HV 76 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l-~~t~d~~~-a~ 76 (480)
+|||+|||+|.||.++|..|++. |+ +|++||+++++++.+.+. +.. ..++++++ ++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~------------------G~~~~~~~~~~~~~~ 92 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDL------------------GIIDEGTTSIAKVED 92 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHT------------------TSCSEEESCTTGGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHC------------------CCcchhcCCHHHHhh
Confidence 37999999999999999999998 88 999999999988876642 111 45678887 89
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCC
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNP 156 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
++||+||+|||.. .+.++++++.+.++++++|++.+++.+...+.+.+.+.+. ++..+|
T Consensus 93 ~~aDvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~------~v~~hP 151 (314)
T 3ggo_A 93 FSPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKR------FVGGHP 151 (314)
T ss_dssp GCCSEEEECSCGG---------------GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG------EECEEE
T ss_pred ccCCEEEEeCCHH---------------HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCC------EEecCc
Confidence 9999999999842 2467788999999999999998888776667776666431 233344
Q ss_pred ----ccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCCh-hHHHHhhhHHhHHHHHHHHHHH
Q 011654 157 ----EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNL-WSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 157 ----e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
+..++..+..+++....+++. +.+..+++.++.++++|+.++ ..++.+++ +...+++++...-..+..++++
T Consensus 152 m~G~e~sG~~~A~~~Lf~g~~~il~-~~~~~~~~~~~~v~~l~~~~G--~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~ 228 (314)
T 3ggo_A 152 IAGTEKSGVEYSLDNLYEGKKVILT-PTKKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVD 228 (314)
T ss_dssp CCCCCCCSGGGCCTTTTTTCEEEEC-CCTTSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccCCcccchhhhhhhhhcCCEEEEE-eCCCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566666665555443 222336889999999999985 45666554 4567888887766655566555
Q ss_pred HH
Q 011654 232 AM 233 (480)
Q Consensus 232 E~ 233 (480)
-+
T Consensus 229 ~~ 230 (314)
T 3ggo_A 229 TL 230 (314)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 50
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.72 E-value=7.1e-17 Score=169.32 Aligned_cols=204 Identities=17% Similarity=0.184 Sum_probs=141.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC----------CCCCCCCChHHHHHhhcCCCEEEecC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD----------QLPIYEPGLEDVVTQCRGRNLFFSTD 71 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~----------~~~~~e~~l~~l~~~~~~~~l~~t~d 71 (480)
+||+|||+|.||.+||..|+++ |++|++||+++++++.+.+. ...+.+...+.. ..+++++++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~-----~~~i~~~~~ 78 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERT-----LKRLIPVTD 78 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHH-----HHTEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH-----HhceeEeCC
Confidence 5899999999999999999998 99999999999998876531 000000001111 136888999
Q ss_pred HHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEE-EEecCCccchHHHHHHHHHhcCCCCce
Q 011654 72 IEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIV-VEKSTVPVKTAEAIEKILTHNSREIKY 150 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iV-i~~STv~~gt~~~l~~~l~~~~~g~~~ 150 (480)
++ ++++||+||+|||+. +...+++++++.+.+++++++ .+.||+++. .+++.+.... .
T Consensus 79 ~~-~~~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~~IlasntSti~i~---~ia~~~~~p~---~- 137 (483)
T 3mog_A 79 IH-ALAAADLVIEAASER-------------LEVKKALFAQLAEVCPPQTLLTTNTSSISIT---AIAAEIKNPE---R- 137 (483)
T ss_dssp GG-GGGGCSEEEECCCCC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCHH---HHTTTSSSGG---G-
T ss_pred HH-HhcCCCEEEEcCCCc-------------HHHHHHHHHHHHHhhccCcEEEecCCCCCHH---HHHHHccCcc---c-
Confidence 86 589999999999853 233467888999999999988 467888764 2222221110 1
Q ss_pred eEe---eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHH
Q 011654 151 QIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 151 ~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
.+. ++|.... .+ ..++++..+ ++++++.+.++++.+++ .++++.+.. .|+++|.+..
T Consensus 138 ~ig~hf~~Pa~v~------~L----vevv~g~~T--s~e~~~~~~~l~~~lGk-~~v~v~d~~----Gfi~Nr~l~~--- 197 (483)
T 3mog_A 138 VAGLHFFNPAPVM------KL----VEVVSGLAT--AAEVVEQLCELTLSWGK-QPVRCHSTP----GFIVNRVARP--- 197 (483)
T ss_dssp EEEEEECSSTTTC------CE----EEEEECSSC--CHHHHHHHHHHHHHTTC-EEEEEESCT----TTTHHHHTHH---
T ss_pred eEEeeecChhhhC------Ce----EEEecCCCC--CHHHHHHHHHHHHHhCC-EEEEEeccC----cchHHHHHHH---
Confidence 111 2332222 11 234566432 68899999999999864 455665543 2777665443
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 011654 228 SSVNAMSALCEATGADVTQVSHAIGKD 254 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
++||...++++.++|++++.+++...
T Consensus 198 -~~~Ea~~l~~~g~~~~~~id~a~~~~ 223 (483)
T 3mog_A 198 -YYSEAWRALEEQVAAPEVIDAALRDG 223 (483)
T ss_dssp -HHHHHHHHHHTTCSCHHHHHHHHHHT
T ss_pred -HHHHHHHHHHhCCCCHHHHHHHHHhc
Confidence 89999999999999999999999744
No 51
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.71 E-value=1.3e-16 Score=158.35 Aligned_cols=265 Identities=15% Similarity=0.131 Sum_probs=157.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcC--C-C-CeEEEEeCCHHHHHHHHC-CCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGYVGGPTMAVIALKC--P-K-IEVAVVDISVSRIAAWNG-DQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~--~-G-~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.||.++|..|+++. + | ++|++||+ +++++.+++ ....+.++.... ...++.++++.+ .+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~-----~~~~~~~~~~~~-~~ 81 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDF-----LARPTCVTDNPA-EV 81 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEE-----EECCSEEESCHH-HH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCe-----EEecceEecCcc-cc
Confidence 79999999999999999998740 0 5 89999999 888998886 433222111000 001245566665 47
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEee-C
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILS-N 155 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~-~ 155 (480)
.++|+||+|||++. +.++++++.+.++++++||..++ ..+..+.+.+.+.+... -..+.+ .
T Consensus 82 ~~~D~vil~vk~~~---------------~~~v~~~i~~~l~~~~~iv~~~n-G~~~~~~l~~~l~~~~v--~~g~~~~~ 143 (317)
T 2qyt_A 82 GTVDYILFCTKDYD---------------MERGVAEIRPMIGQNTKILPLLN-GADIAERMRTYLPDTVV--WKGCVYIS 143 (317)
T ss_dssp CCEEEEEECCSSSC---------------HHHHHHHHGGGEEEEEEEEECSC-SSSHHHHHTTTSCTTTB--CEEEEEEE
T ss_pred CCCCEEEEecCccc---------------HHHHHHHHHhhcCCCCEEEEccC-CCCcHHHHHHHCCCCcE--EEEEEEEE
Confidence 89999999998642 36788889988888888776543 45555555444432110 011112 2
Q ss_pred CccccccccccccCCCCeEEEEeC-CCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHH-----------
Q 011654 156 PEFLAEGTAIQDLFNPDRVLIGGR-ETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFL----------- 223 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~-~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~----------- 223 (480)
..+.+||...+.. ....+++|+. +.. +.+.. .+.++|+..+. ...+..++..++|.|++.|+..
T Consensus 144 a~~~~pg~~~~~~-~g~~~~ig~~~~~~-~~~~~-~~~~ll~~~g~-~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~ 219 (317)
T 2qyt_A 144 ARKSAPGLITLEA-DRELFYFGSGLPEQ-TDDEV-RLAELLTAAGI-RAYNPTDIDWYIMKKFMMISVTATATAYFDKPI 219 (317)
T ss_dssp EEEEETTEEEEEE-EEEEEEEECCSSSC-CHHHH-HHHHHHHHTTC-CEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCH
T ss_pred EEEcCCCEEEEcC-CCceEEEcCCCCCC-cCHHH-HHHHHHHHCCC-CCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCH
Confidence 2233445432211 1112336753 221 24556 88999998752 2345579999999999999853
Q ss_pred --------HHHHHHHHHHHHHHHHhCCCHH--HHHHHhcC----CCCC-CCccccCCCCCcccchhhhHHHHHHHHHHcC
Q 011654 224 --------AQRISSVNAMSALCEATGADVT--QVSHAIGK----DTRI-GPRFLNSSVGFGGSCFQKDILNLVYICECNG 288 (480)
Q Consensus 224 --------~~~ia~~nE~~~l~~~~Gid~~--~v~~~~~~----~~~~-~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g 288 (480)
.+..+.++|+..+++++|+++. .+.+.+.. .++. .+...+...|.--. +-....+++++++++|
T Consensus 220 g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~g~~~E-~~~~~g~~~~~a~~~g 298 (317)
T 2qyt_A 220 GSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQRKMPPESTSSMHSDFLQGGSTE-VETLTGYVVREAEALR 298 (317)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC---------------------CTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccCCCCCChHHHHHHcCCccC-HHHHhhHHHHHHHHcC
Confidence 5677999999999999999863 34443321 1111 11111111111100 1112568889999999
Q ss_pred CchhhhHHHH
Q 011654 289 LTEVANYWKQ 298 (480)
Q Consensus 289 ~~~~~~~~~~ 298 (480)
++ .++.+.
T Consensus 299 v~--~P~~~~ 306 (317)
T 2qyt_A 299 VD--LPMYKR 306 (317)
T ss_dssp CC--CHHHHH
T ss_pred CC--CCHHHH
Confidence 98 555443
No 52
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.71 E-value=8.2e-17 Score=163.31 Aligned_cols=217 Identities=15% Similarity=0.131 Sum_probs=158.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--------eEEEEeCCHH-----HHHHHHCC-CCCCCCCChHHHHHhhcCCCEE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--------EVAVVDISVS-----RIAAWNGD-QLPIYEPGLEDVVTQCRGRNLF 67 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--------~V~~~D~~~~-----~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l~ 67 (480)
.||+|||+|.||+++|..|+++ || +|.+|.++++ .++.+++. .++.|.|++. .+.+++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n--g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~------Lp~~i~ 106 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN--CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGIT------LPDNLV 106 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCC------CCSSEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc--CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCc------CCCCcE
Confidence 4899999999999999999987 54 5999998865 46777764 4666777653 246799
Q ss_pred EecCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-CccchH--HHHHHHHHhc
Q 011654 68 FSTDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VPVKTA--EAIEKILTHN 144 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~--~~l~~~l~~~ 144 (480)
+++|++++++++|+||++||+. +++++++++.++++++.++|..+. +.+++. +.+.+.+.+.
T Consensus 107 ~t~dl~~al~~ad~ii~avPs~---------------~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~ 171 (391)
T 4fgw_A 107 ANPDLIDSVKDVDIIVFNIPHQ---------------FLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEE 171 (391)
T ss_dssp EESCHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHH
T ss_pred EeCCHHHHHhcCCEEEEECChh---------------hhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHH
Confidence 9999999999999999999863 378899999999999998887764 454442 3455655554
Q ss_pred CCCCceeEeeCCccccccccccccCCCCeEEEEeCCCcc-----hHHHHHHHHHHHhccCCCCeEEe-CChhHHHHh---
Q 011654 145 SREIKYQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPE-----GQKAIQALKDVYAHWVPEDRIIT-TNLWSAELS--- 215 (480)
Q Consensus 145 ~~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~-----~~~~~~~~~~l~~~~~~~~~v~~-~~~~~ae~~--- 215 (480)
. +..+.++++|.++.+-.. ..|..+++++.+... ++...+.++++|..- ..+++. .|+...|+.
T Consensus 172 ~-~~~~~vLsGPs~A~EVa~----~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~--~frvy~s~DviGvElgGAl 244 (391)
T 4fgw_A 172 L-GIQCGALSGANIATEVAQ----EHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRP--YFHVSVIEDVAGISICGAL 244 (391)
T ss_dssp H-CCEEEEEECSCCHHHHHT----TCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBT--TEEEEEESCHHHHHHHHHH
T ss_pred h-CccceeccCCchHHHhhc----CCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCC--CEEEEEeCCccceehHHHH
Confidence 3 246778999998876432 245567777653211 122346788888863 235554 688777765
Q ss_pred --------------hhHHhHHHHHHHHHHHHHHHHHHHh---CCCHHHHH
Q 011654 216 --------------KLAANAFLAQRISSVNAMSALCEAT---GADVTQVS 248 (480)
Q Consensus 216 --------------Kl~~N~~~~~~ia~~nE~~~l~~~~---Gid~~~v~ 248 (480)
++-.|+..++....++||.+|+.++ |.+...+.
T Consensus 245 KNViAIAaGi~dGlg~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~ 294 (391)
T 4fgw_A 245 KNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQ 294 (391)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceeec
Confidence 5667889999999999999999998 44444443
No 53
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.71 E-value=2.6e-17 Score=161.32 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=158.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.++.... .+. .+ ...+. +++. ++++++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~----~~~-~~-----~~~~~-~~~~-~~~~~~d~ 66 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVET----DGS-IF-----NESLT-ANDP-DFLATSDL 66 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECT----TSC-EE-----EEEEE-ESCH-HHHHTCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcC----CCc-ee-----eeeee-ecCc-cccCCCCE
Confidence 7999999999999999999998 9999999999876554432110 000 00 00122 3444 45789999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCc--eeEeeCCccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIK--YQILSNPEFL 159 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~--~~v~~~Pe~~ 159 (480)
||+|||++ .+.++++++.+.++++++|+..++ ..++.+.+.+.+.+...+.. .....+| .
T Consensus 67 vi~~v~~~---------------~~~~v~~~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~- 128 (291)
T 1ks9_A 67 LLVTLKAW---------------QVSDAVKSLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGN-V- 128 (291)
T ss_dssp EEECSCGG---------------GHHHHHHHHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETT-E-
T ss_pred EEEEecHH---------------hHHHHHHHHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCC-E-
Confidence 99999853 147788899999998888877643 44554444333322000000 0012344 2
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHH----------------
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFL---------------- 223 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~---------------- 223 (480)
.. ..... ++.+|.... +++..+.++++|+..+. ..++..++..+.+.|++.|+..
T Consensus 129 ----~~-~~~~g-~~~i~~~~~--~~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~ 199 (291)
T 1ks9_A 129 ----II-HVANG-ITHIGPARQ--QDGDYSYLADILQTVLP-DVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRH 199 (291)
T ss_dssp ----EE-EEECC-CEEEEESSG--GGTTCTHHHHHHHTTSS-CEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGG
T ss_pred ----EE-Eeccc-ceEEccCCC--CcchHHHHHHHHHhcCC-CCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHh
Confidence 11 11122 244554211 34567789999998753 3455679999999999999977
Q ss_pred --HHHHHHHHHHHHHHHHhCCCH--HHH----HHHhcCCC-CCCCccccCCCCCcccchhhhHHHHHHHHHHcCCchhhh
Q 011654 224 --AQRISSVNAMSALCEATGADV--TQV----SHAIGKDT-RIGPRFLNSSVGFGGSCFQKDILNLVYICECNGLTEVAN 294 (480)
Q Consensus 224 --~~~ia~~nE~~~l~~~~Gid~--~~v----~~~~~~~~-~~~~~~~~pg~g~gg~cl~kD~~~l~~~a~~~g~~~~~~ 294 (480)
++....++|+..+++++|++. .++ .+.+...+ ..++++.....|..- -+-.+..+++++++++|++ .+
T Consensus 200 ~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d~~~g~~~-e~~~~~g~~~~~a~~~gv~--~P 276 (291)
T 1ks9_A 200 HPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHT-EIDYINGFLLRRARAHGIA--VP 276 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHHHHTTCCC-SGGGTHHHHHHHHHHHTCC--CH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHHHHcCCcc-HHHHHHHHHHHHHHHhCCC--CC
Confidence 788999999999999999986 444 33333211 111121111111111 1335778899999999998 55
Q ss_pred HHHH
Q 011654 295 YWKQ 298 (480)
Q Consensus 295 ~~~~ 298 (480)
+.+.
T Consensus 277 ~~~~ 280 (291)
T 1ks9_A 277 ENTR 280 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 54
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.71 E-value=3.3e-16 Score=154.94 Aligned_cols=207 Identities=16% Similarity=0.143 Sum_probs=135.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh--------------hcCCCE
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ--------------CRGRNL 66 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~--------------~~~~~l 66 (480)
|+||+|||+|.||.++|..|+++ |++|++||+++++++.+++... ..++.++.. ....++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~----~~l~~~~~~g~~~~~~~~~~~~~~~~~~i 88 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIE----ESLRKVAKKKFAENPKAGDEFVEKTLSTI 88 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHH----HHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHH----HHHHHHHHcCCCCccccchhhHHHHHhce
Confidence 47899999999999999999998 9999999999998876532100 000011000 001258
Q ss_pred EEecCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEE-ecCCccchHHHHHHHHHhcC
Q 011654 67 FFSTDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVE-KSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 67 ~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~ 145 (480)
++++|+++++++||+||+|||++. .....+++++.++++++++|+. .|++++. .+.+.+....
T Consensus 89 ~~~~~~~~~~~~aD~Vi~avp~~~-------------~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~---~l~~~~~~~~ 152 (302)
T 1f0y_A 89 ATSTDAASVVHSTDLVVEAIVENL-------------KVKNELFKRLDKFAAEHTIFASNTSSLQIT---SIANATTRQD 152 (302)
T ss_dssp EEESCHHHHTTSCSEEEECCCSCH-------------HHHHHHHHHHTTTSCTTCEEEECCSSSCHH---HHHTTSSCGG
T ss_pred EEecCHHHhhcCCCEEEEcCcCcH-------------HHHHHHHHHHHhhCCCCeEEEECCCCCCHH---HHHHhcCCcc
Confidence 889999888999999999998532 2235678889889988888764 3555543 2322221100
Q ss_pred CCCceeEe---eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHH
Q 011654 146 REIKYQIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAF 222 (480)
Q Consensus 146 ~g~~~~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~ 222 (480)
.+ +. ++|.+..+. ..++++.. .+++..+.+.++|+.++. .++++.+.. .++++|.
T Consensus 153 ---~~-~g~h~~~P~~~~~~----------~~i~~g~~--~~~e~~~~~~~l~~~~G~-~~v~~~~~~----g~i~nr~- 210 (302)
T 1f0y_A 153 ---RF-AGLHFFNPVPVMKL----------VEVIKTPM--TSQKTFESLVDFSKALGK-HPVSCKDTP----GFIVNRL- 210 (302)
T ss_dssp ---GE-EEEEECSSTTTCCE----------EEEECCTT--CCHHHHHHHHHHHHHTTC-EEEEECSCT----TTTHHHH-
T ss_pred ---cE-EEEecCCCcccCce----------EEEeCCCC--CCHHHHHHHHHHHHHcCC-ceEEecCcc----cccHHHH-
Confidence 11 11 234332211 12344432 258899999999999863 344444421 1444443
Q ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 011654 223 LAQRISSVNAMSALCEATGADVTQVSHAIGKD 254 (480)
Q Consensus 223 ~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
.++++||...++++.++|++++..++...
T Consensus 211 ---l~~~~~Ea~~l~~~g~~~~~~id~~~~~g 239 (302)
T 1f0y_A 211 ---LVPYLMEAIRLYERGDASKEDIDTAMKLG 239 (302)
T ss_dssp ---HHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 35789999999999999999999988643
No 55
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.70 E-value=1.9e-16 Score=159.97 Aligned_cols=296 Identities=18% Similarity=0.176 Sum_probs=175.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC-CCCCCCCChHHHHHhhcCCCE-EEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD-QLPIYEPGLEDVVTQCRGRNL-FFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l-~~t~d~~~a~~~a 79 (480)
|||+|||+|.||..+|..|+++ |++|++||+++++++.+++. ...+.+.+++. ..++ .++++++++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG------TAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCE------EECCSEEESCHHHHHTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEecccccc------ccccceecCCHHHHHhcC
Confidence 7999999999999999999998 99999999999999988753 22211111100 0122 4678888888999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCce-e--EeeCC
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKY-Q--ILSNP 156 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~-~--v~~~P 156 (480)
|+||+|||++. ..++++++.+.++++++|+...++.+++.+ +.+.+.+.+. ..+ + +..+|
T Consensus 77 D~vi~~v~~~~---------------~~~~~~~l~~~l~~~~~vv~~~~~~~~~~~-~~~~l~~~~~-~~v~~~~~~~~~ 139 (359)
T 1bg6_A 77 DVILIVVPAIH---------------HASIAANIASYISEGQLIILNPGATGGALE-FRKILRENGA-PEVTIGETSSML 139 (359)
T ss_dssp SEEEECSCGGG---------------HHHHHHHHGGGCCTTCEEEESSCCSSHHHH-HHHHHHHTTC-CCCEEEEESSCS
T ss_pred CEEEEeCCchH---------------HHHHHHHHHHhCCCCCEEEEcCCCchHHHH-HHHHHHhcCC-CCeEEEEecCCc
Confidence 99999998642 367788899999999988876443445433 4555655421 122 1 12355
Q ss_pred ccc---cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhH-------------------HHH
Q 011654 157 EFL---AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWS-------------------AEL 214 (480)
Q Consensus 157 e~~---~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~-------------------ae~ 214 (480)
... +||... .+....++.+|......+++..+.++++|..+. ...++.. ...
T Consensus 140 ~~~~~~gpg~v~-~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~-----~~~di~~k~~~nvn~~~n~~~al~~~~~~ 213 (359)
T 1bg6_A 140 FTCRSERPGQVT-VNAIKGAMDFACLPAAKAGWALEQIGSVLPQYV-----AVENVLHTSLTNVNAVMHPLPTLLNAARC 213 (359)
T ss_dssp EEEECSSTTEEE-EEEECSCEEEEEESGGGHHHHHHHHTTTCTTEE-----ECSCHHHHHHCCHHHHHTHHHHHTTHHHH
T ss_pred EEEEeCCCCEEE-EEEeecceEEEeccccccHHHHHHHHHHhhhcE-----EcCChHhhhccCCCccccHHHHHhhhchh
Confidence 432 345332 111123456675322224556777777775531 1123211 001
Q ss_pred hh---hH------HhHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCC---C-------CCcccc--CCC-CCcccc
Q 011654 215 SK---LA------ANAFLAQRISSVNAMSALCEATGADVTQVSHAIGKDTR---I-------GPRFLN--SSV-GFGGSC 272 (480)
Q Consensus 215 ~K---l~------~N~~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~---~-------~~~~~~--pg~-g~gg~c 272 (480)
.| +. .|..+.+....++|+..+++++|+++.++.+.+..... . .+.++. .++ .+-+.-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~ 293 (359)
T 1bg6_A 214 ESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRY 293 (359)
T ss_dssp HTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSCCHH
T ss_pred hcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccc
Confidence 11 11 22346777889999999999999988666666543110 0 011111 011 133336
Q ss_pred hhhhH----HHHHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHHhcCcC--CCCEEEEEeeccCCCCCccc
Q 011654 273 FQKDI----LNLVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSSMFNTV--SGKKIAILGFAFKKDTGDTR 342 (480)
Q Consensus 273 l~kD~----~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--~~~~v~ilGla~K~~~~d~r 342 (480)
+.||+ .+++++|+++|++ .++.+.+.+ .+.....+.. .++++..+|++ +.+++|+|
T Consensus 294 ~~~D~~~~~g~~~~~a~~~gv~--~P~~~~l~~-----------~~~~~~~~~~~~~g~~~~~lgl~-~~~~~~~~ 355 (359)
T 1bg6_A 294 FFEDVSTGLVPLSELGRAVNVP--TPLIDAVLD-----------LISSLIDTDFRKEGRTLEKLGLS-GLTAAGIR 355 (359)
T ss_dssp HHHHHHTTHHHHHHHHHHTTCC--CHHHHHHHH-----------HHHHHTTCCHHHHSCCTTTTTCT-TCCHHHHH
T ss_pred eecCcCccHHHHHHHHHHcCCC--chHHHHHHH-----------HHHHHHCCChhhcCCCHHhcCCC-CCCHHHHH
Confidence 67887 6889999999998 565544322 1111111111 36678888998 77777765
No 56
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.70 E-value=2.8e-16 Score=162.72 Aligned_cols=201 Identities=18% Similarity=0.211 Sum_probs=135.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHH--------HH-HCCCCCCCCCChHHHHHhhcCCCEEEecC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIA--------AW-NGDQLPIYEPGLEDVVTQCRGRNLFFSTD 71 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~--------~l-~~~~~~~~e~~l~~l~~~~~~~~l~~t~d 71 (480)
|+||+|||+|.||.+||..|+++ |++|++||+++++.. .+ .+|... +...+.+ ..++++++|
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~--~~~~~~~-----~~~i~~t~d 124 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLN--DKRIEKI-----NANLKITSD 124 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCC--HHHHHHH-----HTTEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCC--HHHHHHH-----hcceEEeCC
Confidence 57999999999999999999998 999999999998432 11 222110 0001111 246889999
Q ss_pred HHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEE-EecCCccchHHHHHHHHHhcCCCCce
Q 011654 72 IEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVV-EKSTVPVKTAEAIEKILTHNSREIKY 150 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~g~~~ 150 (480)
++ ++++||+||+|||+. +...+.+++++.+.++++++|+ ++||+++. .+++.+... ..
T Consensus 125 l~-al~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~---~ia~~~~~p---~r- 183 (460)
T 3k6j_A 125 FH-KLSNCDLIVESVIED-------------MKLKKELFANLENICKSTCIFGTNTSSLDLN---EISSVLRDP---SN- 183 (460)
T ss_dssp GG-GCTTCSEEEECCCSC-------------HHHHHHHHHHHHTTSCTTCEEEECCSSSCHH---HHHTTSSSG---GG-
T ss_pred HH-HHccCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCCEEEecCCChhHH---HHHHhccCC---cc-
Confidence 86 589999999999853 2334678889999999999885 45677653 232222110 01
Q ss_pred eEe---eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHH
Q 011654 151 QIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 151 ~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
++. ++|....+ +. .|+ .+.. +++++++.+.++++.+++ .++++.+. .+++.|.+. .
T Consensus 184 ~iG~HffnPv~~m~------Lv---EIv-~g~~--Ts~e~~~~~~~l~~~lGk-~~v~v~d~-----pGfi~Nril---~ 242 (460)
T 3k6j_A 184 LVGIHFFNPANVIR------LV---EII-YGSH--TSSQAIATAFQACESIKK-LPVLVGNC-----KSFVFNRLL---H 242 (460)
T ss_dssp EEEEECCSSTTTCC------EE---EEE-CCSS--CCHHHHHHHHHHHHHTTC-EEEEESSC-----CHHHHHHHH---H
T ss_pred eEEEEecchhhhCC------EE---EEE-eCCC--CCHHHHHHHHHHHHHhCC-EEEEEecc-----cHHHHHHHH---H
Confidence 121 23433221 11 244 4432 268999999999999864 45666652 224555333 4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhc
Q 011654 228 SSVNAMSALCEATGADVTQVSHAIG 252 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v~~~~~ 252 (480)
++++|+..++++.|+|++++.+++.
T Consensus 243 ~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 243 VYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6899999999999999999999986
No 57
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.68 E-value=3.9e-15 Score=146.23 Aligned_cols=175 Identities=15% Similarity=0.168 Sum_probs=123.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||.++|..|++++.|++|++||+++++.+.+.+... ....+++++++++++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-----------------VDEATADFKVFAALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-----------------CSEEESCTTTTGGGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-----------------cccccCCHHHhhcCCC
Confidence 48999999999999999999987446899999999999887764210 0135667777789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhh-CCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCC---
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANV-SNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNP--- 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~-l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P--- 156 (480)
+||+|||.+ .+.++++++.+. ++++++|++.|++.++..+.+.+.+.+.. ..| +..+|
T Consensus 69 vVilavp~~---------------~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~--~~~-v~~~P~~g 130 (290)
T 3b1f_A 69 VIILAVPIK---------------KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKP--VQF-VGSHPMAG 130 (290)
T ss_dssp EEEECSCHH---------------HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSS--CEE-EEEEEC--
T ss_pred EEEEcCCHH---------------HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccC--CEE-EEeCCcCC
Confidence 999999852 246788889888 88999999888887777777777765421 222 33344
Q ss_pred -ccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHH
Q 011654 157 -EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAE 213 (480)
Q Consensus 157 -e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae 213 (480)
+..+++.+..+++....+++... ...+++..+.++++|+.++ ..++..+.+..+
T Consensus 131 ~~~~g~~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~G--~~~~~~~~~~~d 185 (290)
T 3b1f_A 131 SHKSGAVAANVNLFENAYYIFSPS-CLTKPNTIPALQDLLSGLH--ARYVEIDAAEHD 185 (290)
T ss_dssp ---CCTTSCCTTTTTTSEEEEEEC-TTCCTTHHHHHHHHTGGGC--CEEEECCHHHHH
T ss_pred CCcchHHHhhHHHhCCCeEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHH
Confidence 33456666556666655544422 1224678899999999985 466666655433
No 58
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.67 E-value=2.5e-15 Score=147.27 Aligned_cols=207 Identities=14% Similarity=0.171 Sum_probs=138.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCC-----------CCCCCChHHHHHhhcCCCEEEe
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQL-----------PIYEPGLEDVVTQCRGRNLFFS 69 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~-----------~~~e~~l~~l~~~~~~~~l~~t 69 (480)
|+||+|||+|.||.++|..|+.+ |++|++||+++++++.+.+... .+.....+... .+++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~-----~~i~~~ 76 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKAL-----GGIRYS 76 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHH-----HHCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHH-----cCeEEe
Confidence 35899999999999999999998 9999999999998887664200 01111111111 246788
Q ss_pred cCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEE-ecCCccchHHHHHHHHHhcCCCC
Q 011654 70 TDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVE-KSTVPVKTAEAIEKILTHNSREI 148 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~g~ 148 (480)
+++++++++||+||+|||.. ......+++++.+.++++++++. .|++++ ..+.+.+....
T Consensus 77 ~~~~~~~~~aDlVi~av~~~-------------~~~~~~v~~~l~~~~~~~~il~s~tS~~~~---~~la~~~~~~~--- 137 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPES-------------LDLKRDIYTKLGELAPAKTIFATNSSTLLP---SDLVGYTGRGD--- 137 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHHHHHSCGG---
T ss_pred CCHHHHhccCCEEEEeccCc-------------HHHHHHHHHHHHhhCCCCcEEEECCCCCCH---HHHHhhcCCCc---
Confidence 99998889999999999853 23356778899999999998874 455553 33444443211
Q ss_pred ceeEe---eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHH
Q 011654 149 KYQIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQ 225 (480)
Q Consensus 149 ~~~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~ 225 (480)
.+ +. ++|....+. ..++++. .++++..+.+.++++.+++ .++.+.... ..++.|.+
T Consensus 138 ~~-ig~h~~~p~~~~~l----------vevv~~~--~t~~~~~~~~~~l~~~~g~-~~v~v~~~~----~g~i~nr~--- 196 (283)
T 4e12_A 138 KF-LALHFANHVWVNNT----------AEVMGTT--KTDPEVYQQVVEFASAIGM-VPIELKKEK----AGYVLNSL--- 196 (283)
T ss_dssp GE-EEEEECSSTTTSCE----------EEEEECT--TSCHHHHHHHHHHHHHTTC-EEEECSSCC----TTTTHHHH---
T ss_pred ce-EEEccCCCcccCce----------EEEEeCC--CCCHHHHHHHHHHHHHcCC-EEEEEecCC----CCEEehHH---
Confidence 11 11 234322211 1234543 2368899999999999863 344442111 12344432
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 011654 226 RISSVNAMSALCEATGADVTQVSHAIGKD 254 (480)
Q Consensus 226 ~ia~~nE~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
..++++|...++++.++|++++.+++...
T Consensus 197 ~~~~~~ea~~l~~~g~~~~~~id~~~~~~ 225 (283)
T 4e12_A 197 LVPLLDAAAELLVDGIADPETIDKTWRIG 225 (283)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhc
Confidence 34689999999999999999999998753
No 59
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.66 E-value=1.5e-15 Score=147.34 Aligned_cols=197 Identities=13% Similarity=0.052 Sum_probs=134.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIE-VAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||..+|..|++. |++ |++||+++++.+.+.+. -++..+++++++++++|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~------------------~g~~~~~~~~~~~~~~D 70 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQK------------------VEAEYTTDLAEVNPYAK 70 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHH------------------TTCEEESCGGGSCSCCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHH------------------cCCceeCCHHHHhcCCC
Confidence 7899999999999999999998 898 99999999998887642 12456778888788999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|+|.+ .+.++++++.+.++++++|++.|+..+... +.+.+.+. ......+|-...
T Consensus 71 vvi~av~~~---------------~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~----~~~~~~~~~~g~ 129 (266)
T 3d1l_A 71 LYIVSLKDS---------------AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHY----GVFYPMQTFSKQ 129 (266)
T ss_dssp EEEECCCHH---------------HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSE----EEEEECCCC---
T ss_pred EEEEecCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhc----cCcCCceecCCC
Confidence 999999842 247778888888889999998887644322 32222211 111233442111
Q ss_pred ccccccccCCCCeEEE-EeCCCcchHHHHHHHHHHHhccCCCCeEEeCChh---HHHHhhhHHhHHHHHHHHHHHHHHHH
Q 011654 161 EGTAIQDLFNPDRVLI-GGRETPEGQKAIQALKDVYAHWVPEDRIITTNLW---SAELSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 161 ~G~a~~~~~~~~~vvi-G~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~---~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
+. ..+.+.+ +++ |+ +++..+.++++|+.++. ..++..+.. ...++|+++|.. ..+..++|. +
T Consensus 130 ~~---~~~~~~~-~~v~~~-----~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l 195 (266)
T 3d1l_A 130 RE---VDFKEIP-FFIEAS-----STEDAAFLKAIASTLSN-RVYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--L 195 (266)
T ss_dssp CC---CCCTTCC-EEEEES-----SHHHHHHHHHHHHTTCS-CEEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
T ss_pred ch---hhcCCCe-EEEecC-----CHHHHHHHHHHHHhcCC-cEEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
Confidence 11 1223333 445 44 37889999999999852 334444332 568899998862 234445553 7
Q ss_pred HHHhCCCHHHHHHHhcC
Q 011654 237 CEATGADVTQVSHAIGK 253 (480)
Q Consensus 237 ~~~~Gid~~~v~~~~~~ 253 (480)
+++.|+|.+++.+++..
T Consensus 196 ~~~~Gl~~~~~~~l~~~ 212 (266)
T 3d1l_A 196 LKKYNLPFDVMLPLIDE 212 (266)
T ss_dssp HHHTTCCGGGGHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 78999999988877764
No 60
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.66 E-value=8.5e-15 Score=142.91 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=130.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|++. |++|++||+++++++.+++... ...++++++++ .++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~-----------------~~~~~~~~~~~-~~~D~ 60 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQL-----------------VDEAGQDLSLL-QTAKI 60 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGG-TTCSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCC-----------------CccccCCHHHh-CCCCE
Confidence 7999999999999999999998 8999999999999888764211 01356778887 89999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||.. .+.++++++.+.++++++|++.+++.+...+.+.+.+... ...+-+.+++..+|
T Consensus 61 vi~av~~~---------------~~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~---~~~~p~~g~~~~gp 122 (279)
T 2f1k_A 61 IFLCTPIQ---------------LILPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWSGF---IGGHPMAGTAAQGI 122 (279)
T ss_dssp EEECSCHH---------------HHHHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHSTTC---EEEEECCCCSCSSG
T ss_pred EEEECCHH---------------HHHHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhCCE---eecCcccCCccCCH
Confidence 99999842 3577888999999999999887777665555554433210 01111223344556
Q ss_pred cccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHH
Q 011654 162 GTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
+.+..+++....+++... ...+++..+.++++|+.++. ..++..+....+++|++.|.-..+..+++
T Consensus 123 ~~a~~~~~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~p~~i~~al~ 189 (279)
T 2f1k_A 123 DGAEENLFVNAPYVLTPT-EYTDPEQLACLRSVLEPLGV-KIYLCTPADHDQAVAWISHLPVMVSAALI 189 (279)
T ss_dssp GGCCTTTTTTCEEEEEEC-TTCCHHHHHHHHHHHGGGTC-EEEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHhHHHhCCCcEEEecC-CCCCHHHHHHHHHHHHHcCC-EEEEcCHHHHHHHHHHHhhHHHHHHHHHH
Confidence 666555555433433321 12257889999999999852 23445667889999999997554444443
No 61
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.66 E-value=9.3e-16 Score=168.28 Aligned_cols=202 Identities=16% Similarity=0.196 Sum_probs=135.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh---------hcCCCEEEecC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ---------CRGRNLFFSTD 71 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~---------~~~~~l~~t~d 71 (480)
|+||+|||+|.||.+||..|+++ |++|++||+++++++...+.. +..++.++.. ...+++++++|
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d 387 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGIEQGLAEA----AKLLVGRVDKGRMTPAKMAEVLNGIRPTLS 387 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH----HHHHHHHHTTTSSCHHHHHHHHHHEEEESS
T ss_pred CCEEEEECCChhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHH----HHHHHHHHhcCCCCHHHHHHHhcCeEEECC
Confidence 57899999999999999999998 999999999999887632100 0011111110 00124788889
Q ss_pred HHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEE-ecCCccchHHHHHHHHHhcCCCCce
Q 011654 72 IEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVE-KSTVPVKTAEAIEKILTHNSREIKY 150 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~g~~~ 150 (480)
+ +++++||+||+|||++. ...+.+++++.++++++++|+. +||+++.. +.+.+... ..|
T Consensus 388 ~-~~~~~aDlVIeaV~e~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~~---~~~ 447 (715)
T 1wdk_A 388 Y-GDFGNVDLVVEAVVENP-------------KVKQAVLAEVENHVREDAILASNTSTISISL---LAKALKRP---ENF 447 (715)
T ss_dssp S-TTGGGCSEEEECCCSCH-------------HHHHHHHHHHHTTSCTTCEEEECCSSSCHHH---HGGGCSCG---GGE
T ss_pred H-HHHCCCCEEEEcCCCCH-------------HHHHHHHHHHHhhCCCCeEEEeCCCCCCHHH---HHHHhcCc---cce
Confidence 8 56899999999998642 2346678889999999998864 56676542 32222110 011
Q ss_pred eEe---eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHH
Q 011654 151 QIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 151 ~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
+. ++|.+..+. ..++ .+..+ ++++++.+.++++.+++ .++++.+. .+++.|.+. +
T Consensus 448 -ig~hf~~P~~~~~l---------vevv-~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~d~-----~Gfi~Nril---~ 505 (715)
T 1wdk_A 448 -VGMHFFNPVHMMPL---------VEVI-RGEKS--SDLAVATTVAYAKKMGK-NPIVVNDC-----PGFLVNRVL---F 505 (715)
T ss_dssp -EEEECCSSTTTCCE---------EEEE-ECSSC--CHHHHHHHHHHHHHTTC-EEEEEESC-----TTTTHHHHH---H
T ss_pred -EEEEccCCcccCce---------EEEE-ECCCC--CHHHHHHHHHHHHHhCC-EeEEEcCC-----CChhhhHHH---H
Confidence 11 244432211 1244 44322 58999999999999863 45666653 455666433 5
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHh
Q 011654 228 SSVNAMSALCEATGADVTQVSHAI 251 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v~~~~ 251 (480)
+++||+..++++ |+|++++.+++
T Consensus 506 ~~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 506 PYFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCHHHHHHHH
Confidence 789999999997 99999999998
No 62
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.65 E-value=1.6e-15 Score=166.59 Aligned_cols=207 Identities=18% Similarity=0.193 Sum_probs=136.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCC----CCCCCC-hHHHHHhhcCCCEEEecCHHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQL----PIYEPG-LEDVVTQCRGRNLFFSTDIEKH 75 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~----~~~e~~-l~~l~~~~~~~~l~~t~d~~~a 75 (480)
|+||+|||+|.||.+||..|+++ ||+|++||++++.++..++... ...+.+ +...-.....+++++++|+ ++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~ 388 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS--NYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ES 388 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GG
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HH
Confidence 57899999999999999999998 9999999999998876532100 000000 0000000113568899998 46
Q ss_pred hccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEE-ecCCccchHHHHHHHHHhcCCCCceeE--
Q 011654 76 VAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVE-KSTVPVKTAEAIEKILTHNSREIKYQI-- 152 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~g~~~~v-- 152 (480)
+++||+||+|||++. ...+.+++++.++++++++|+. +||+++.. +.+.+... ..|.-
T Consensus 389 ~~~aDlVIeaVpe~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~p---~~~iG~h 449 (725)
T 2wtb_A 389 FRDVDMVIEAVIENI-------------SLKQQIFADLEKYCPQHCILASNTSTIDLNK---IGERTKSQ---DRIVGAH 449 (725)
T ss_dssp GTTCSEEEECCCSCH-------------HHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTCSCT---TTEEEEE
T ss_pred HCCCCEEEEcCcCCH-------------HHHHHHHHHHHhhCCCCcEEEeCCCCCCHHH---HHHHhcCC---CCEEEec
Confidence 899999999998642 2346777889999999998854 56676642 22212110 11110
Q ss_pred eeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHH
Q 011654 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
.++|.+..+ +. .| +.+..+ ++++++.+.++++.+++ .++++.+. .+++.|.+ .++++||
T Consensus 450 f~~P~~~~~------lv---ev-v~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~d~-----~Gfi~Nri---l~~~~~E 508 (725)
T 2wtb_A 450 FFSPAHIMP------LL---EI-VRTNHT--SAQVIVDLLDVGKKIKK-TPVVVGNC-----TGFAVNRM---FFPYTQA 508 (725)
T ss_dssp ECSSTTTCC------EE---EE-EECSSC--CHHHHHHHHHHHHHTTC-EEEEEESS-----TTTTHHHH---HHHHHHH
T ss_pred CCCCcccCc------eE---EE-EECCCC--CHHHHHHHHHHHHHhCC-EEEEECCC-----ccHHHHHH---HHHHHHH
Confidence 134543322 11 24 444322 58999999999999863 45666653 55666643 3578999
Q ss_pred HHHHHHHhCCCHHHHHHHh
Q 011654 233 MSALCEATGADVTQVSHAI 251 (480)
Q Consensus 233 ~~~l~~~~Gid~~~v~~~~ 251 (480)
+..++++ |+|++++.+++
T Consensus 509 a~~l~~~-G~~~e~id~~~ 526 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDRAI 526 (725)
T ss_dssp HHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHC-CCCHHHHHHHH
Confidence 9999998 99999999998
No 63
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.64 E-value=3.7e-15 Score=149.61 Aligned_cols=260 Identities=18% Similarity=0.201 Sum_probs=163.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+++|..|+++ |++|++||++ ++++.+++....+..++... ..++++++++++ +.++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~-~~~~D 72 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGATH------TLPVRATHDAAA-LGEQD 72 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEEE------EECCEEESCHHH-HCCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCeE------EEeeeEECCHHH-cCCCC
Confidence 48999999999999999999998 9999999996 67788875432222121110 113456788876 68999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-Cc-----------------cchHHHHHHHHH
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VP-----------------VKTAEAIEKILT 142 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~-----------------~gt~~~l~~~l~ 142 (480)
+||+|||++ .+.++++.+.+.++++++|+..+. ++ .+..+.+.+.+.
T Consensus 73 ~Vilavk~~---------------~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 137 (335)
T 3ghy_A 73 VVIVAVKAP---------------ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP 137 (335)
T ss_dssp EEEECCCHH---------------HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC
T ss_pred EEEEeCCch---------------hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC
Confidence 999999852 357788889888988888875432 22 233334544443
Q ss_pred hcCCCCceeEee-CCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhH
Q 011654 143 HNSREIKYQILS-NPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANA 221 (480)
Q Consensus 143 ~~~~g~~~~v~~-~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~ 221 (480)
.... -..+++ +-.+..||.+.+.. ...+.+|..+.. +.+..+.+.++|+...- ......|+....|.|++.|+
T Consensus 138 ~~~v--~~gv~~~~a~~~~pg~v~~~~--~g~~~iG~~~~~-~~~~~~~l~~~l~~~g~-~~~~~~di~~~~w~Kl~~na 211 (335)
T 3ghy_A 138 TRHV--LGCVVHLTCATVSPGHIRHGN--GRRLILGEPAGG-ASPRLASIAALFGRAGL-QAECSEAIQRDIWFKLWGNM 211 (335)
T ss_dssp GGGE--EEEEECCCEEESSTTEEEECS--CCEEEEECTTCS-CCHHHHHHHHHHHHTTC-EEEECSCHHHHHHHHHHTTT
T ss_pred cccE--EEEEEEEEEEEcCCcEEEECC--CCeEEEecCCCC-cCHHHHHHHHHHHhCCC-CcEeCchHHHHHHHHHHHHh
Confidence 2210 011222 22344566654322 246778864322 34567888899987531 23445699999999977653
Q ss_pred ---------------------HHHHHHHHHHHHHHHHHHhCCCH----HHHHHHhcCCCCC-CCccccCCCCCccc-chh
Q 011654 222 ---------------------FLAQRISSVNAMSALCEATGADV----TQVSHAIGKDTRI-GPRFLNSSVGFGGS-CFQ 274 (480)
Q Consensus 222 ---------------------~~~~~ia~~nE~~~l~~~~Gid~----~~v~~~~~~~~~~-~~~~~~pg~g~gg~-cl~ 274 (480)
.+++....++|+..+++++|+++ +++++.....+.. .+++-+-- -|. -.-
T Consensus 212 ~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~sSM~qD~~---~gr~~tE 288 (335)
T 3ghy_A 212 TMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGAFKTSMLQDAE---AGRGPLE 288 (335)
T ss_dssp THHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCSCCCTTTC--------CCCCC
T ss_pred hhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCCCCcHHHHHHH---cCCCCch
Confidence 56778899999999999999753 4555544432221 12221111 122 222
Q ss_pred hhH--HHHHHHHHHcCCchhhhHH
Q 011654 275 KDI--LNLVYICECNGLTEVANYW 296 (480)
Q Consensus 275 kD~--~~l~~~a~~~g~~~~~~~~ 296 (480)
-|. .++++.|+++|++ .|+.
T Consensus 289 id~i~G~vv~~a~~~gv~--~P~~ 310 (335)
T 3ghy_A 289 IDALVASVREIGLHVGVP--TPQI 310 (335)
T ss_dssp HHHHTHHHHHHHHHHTCC--CHHH
T ss_pred HHHHhhHHHHHHHHhCCC--CCHH
Confidence 332 3788999999998 4533
No 64
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.64 E-value=1.3e-15 Score=149.43 Aligned_cols=204 Identities=15% Similarity=0.105 Sum_probs=134.6
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+ |.||.++|..|+++ |++|++||+++++++.+.+.. +..+ +..++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g-------------------~~~~-~~~~~~~~a 68 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMG-------------------IPLT-DGDGWIDEA 68 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTT-------------------CCCC-CSSGGGGTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcC-------------------CCcC-CHHHHhcCC
Confidence 479999999 99999999999998 999999999999988876511 1122 455668899
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||.. .+.++++++.+.++++++|++.|+..+ .+.+. +...+.. ++..+|.+.
T Consensus 69 DvVi~av~~~---------------~~~~v~~~l~~~l~~~~ivv~~s~~~~--~~~l~----~~~~~~~-~v~~~P~~~ 126 (286)
T 3c24_A 69 DVVVLALPDN---------------IIEKVAEDIVPRVRPGTIVLILDAAAP--YAGVM----PERADIT-YFIGHPCHP 126 (286)
T ss_dssp SEEEECSCHH---------------HHHHHHHHHGGGSCTTCEEEESCSHHH--HHTCS----CCCTTSE-EEEEEECCS
T ss_pred CEEEEcCCch---------------HHHHHHHHHHHhCCCCCEEEECCCCch--hHHHH----hhhCCCe-EEecCCCCc
Confidence 9999999842 257888899999999999988666432 12222 1111222 233666543
Q ss_pred cc---cc---cccccCC----CCeEEEEeCCCcchHHHHHHHHHHHhccCCCC---eEEeCChhHHHHh-hhHHhHHHHH
Q 011654 160 AE---GT---AIQDLFN----PDRVLIGGRETPEGQKAIQALKDVYAHWVPED---RIITTNLWSAELS-KLAANAFLAQ 225 (480)
Q Consensus 160 ~~---G~---a~~~~~~----~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~---~v~~~~~~~ae~~-Kl~~N~~~~~ 225 (480)
.+ +. ...+... ...++++... +++..+.++++|+.++ . .++..+....... |.+.|.....
T Consensus 127 ~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~---~~~~~~~v~~l~~~~G--~~~~~~~~v~~~~~~~~~~a~~n~~~~~ 201 (286)
T 3c24_A 127 PLFNDETDPAARTDYHGGIAKQAIVCALMQG---PEEHYAIGADICETMW--SPVTRTHRVTTEQLAILEPGLSEMVAMP 201 (286)
T ss_dssp CSSCCCCSHHHHTCSSSSSSCEEEEEEEEES---CTHHHHHHHHHHHHHT--CSEEEEEECCHHHHHHHTTHHHHTTHHH
T ss_pred cccccccchhhccCcccccccceeeeeccCC---CHHHHHHHHHHHHHhc--CCcceEEEeChhHhHHHHHHHHHHHHHH
Confidence 22 11 1111100 0112222111 4678999999999984 3 3555555444444 9999865555
Q ss_pred HHH-HHHHHHHHHHHhCCCHHHHHHHhcC
Q 011654 226 RIS-SVNAMSALCEATGADVTQVSHAIGK 253 (480)
Q Consensus 226 ~ia-~~nE~~~l~~~~Gid~~~v~~~~~~ 253 (480)
.+. +++++...+.+.|+|.+++.+++..
T Consensus 202 ~~~~~~eal~~~~~~~Gl~~~~~~~~~~~ 230 (286)
T 3c24_A 202 FVETMVHAVDECADRYGIDRQAALDFMIG 230 (286)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 544 4445777788889999999888763
No 65
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.63 E-value=6.6e-15 Score=154.02 Aligned_cols=205 Identities=16% Similarity=0.175 Sum_probs=136.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh--h-----cCCCEEEecCHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ--C-----RGRNLFFSTDIE 73 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~--~-----~~~~l~~t~d~~ 73 (480)
|+||+|||+|.||.++|..|+++ |++|++||+++++++..++.. +..++.++.. . .....+++++++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKII----TFTLEKEASRAHQNGQASAKPKLRFSSSTK 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHH----HHHHHHHHHHHHHTTCCCCCCCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHH----HHHHHHHHHcCCCCHHHHHHHHhhhcCCHH
Confidence 57999999999999999999998 999999999999887765411 0111222211 0 012245678884
Q ss_pred HHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCC--CCcee
Q 011654 74 KHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSR--EIKYQ 151 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~--g~~~~ 151 (480)
++++||+||+|||+. +.....+++++.++++++++|+. ||..+.++ .+.+.+..... +..|
T Consensus 111 -~~~~aDlVIeaVpe~-------------~~~k~~v~~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf- 173 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFED-------------MNLKKKVFAELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHF- 173 (463)
T ss_dssp -GGTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEE-
T ss_pred -HHCCCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeec-
Confidence 589999999999852 23346788889999999998875 77766654 44443321110 1111
Q ss_pred EeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHH
Q 011654 152 ILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 152 v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
++|....+ +. .+ +.+..+ ++++++.+.++++.+++ .++++.+. .+++.|.+. ..+++
T Consensus 174 --~~P~~~~~------lv---ev-v~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~~~-----~gfi~Nrll---~~~~~ 230 (463)
T 1zcj_A 174 --FSPAHVMR------LL---EV-IPSRYS--SPTTIATVMSLSKKIGK-IGVVVGNC-----YGFVGNRML---APYYN 230 (463)
T ss_dssp --CSSTTTCC------EE---EE-EECSSC--CHHHHHHHHHHHHHTTC-EEEEBCCS-----TTTTHHHHH---HHHHH
T ss_pred --CCCcccce------eE---EE-eCCCCC--CHHHHHHHHHHHHHhCC-EEEEECCC-----ccHHHHHHH---HHHHH
Confidence 25543321 11 24 444322 68999999999999863 44555542 334555433 44679
Q ss_pred HHHHHHHHhCCCHHHHHHHhc
Q 011654 232 AMSALCEATGADVTQVSHAIG 252 (480)
Q Consensus 232 E~~~l~~~~Gid~~~v~~~~~ 252 (480)
|...++++ |++++++.+++.
T Consensus 231 ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 231 QGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp HHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHHH
Confidence 99999988 899999999986
No 66
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.63 E-value=1.5e-14 Score=138.74 Aligned_cols=196 Identities=17% Similarity=0.247 Sum_probs=126.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC----eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI----EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~----~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
+|||+|||+|.||.++|..|+++ |+ +|++||+++++.+.+.+. -+++.++++.+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~------------------~g~~~~~~~~e~~ 61 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEK------------------YGLTTTTDNNEVA 61 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHH------------------HCCEECSCHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHH------------------hCCEEeCChHHHH
Confidence 37999999999999999999998 88 999999999999887642 1356778888888
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEE-ecCCccchHHHHHHHHHhcCCCCceeEe--
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVE-KSTVPVKTAEAIEKILTHNSREIKYQIL-- 153 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~g~~~~v~-- 153 (480)
+++|+||+|||.. .+.++++++.++++++++|+. .++++. +.+.+.+.... . .+.
T Consensus 62 ~~aDvVilav~~~---------------~~~~v~~~l~~~l~~~~~vvs~~~gi~~---~~l~~~~~~~~---~-~v~~~ 119 (247)
T 3gt0_A 62 KNADILILSIKPD---------------LYASIINEIKEIIKNDAIIVTIAAGKSI---ESTENAFNKKV---K-VVRVM 119 (247)
T ss_dssp HHCSEEEECSCTT---------------THHHHC---CCSSCTTCEEEECSCCSCH---HHHHHHHCSCC---E-EEEEE
T ss_pred HhCCEEEEEeCHH---------------HHHHHHHHHHhhcCCCCEEEEecCCCCH---HHHHHHhCCCC---c-EEEEe
Confidence 9999999999632 146778889888988988773 334442 34555553311 1 122
Q ss_pred -eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHH-HhhhHHhHHHHHHHHHHH
Q 011654 154 -SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAE-LSKLAANAFLAQRISSVN 231 (480)
Q Consensus 154 -~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae-~~Kl~~N~~~~~~ia~~n 231 (480)
..|....+|. ..+..+. ..+++..+.++++|+.++ ..+.+ +...-. .+.+.. ..-+....++.
T Consensus 120 p~~p~~~~~g~---------~~~~~~~--~~~~~~~~~~~~l~~~~G--~~~~~-~e~~~d~~~a~~g-~gpa~~~~~~e 184 (247)
T 3gt0_A 120 PNTPALVGEGM---------SALCPNE--MVTEKDLEDVLNIFNSFG--QTEIV-SEKLMDVVTSVSG-SSPAYVYMIIE 184 (247)
T ss_dssp CCGGGGGTCEE---------EEEEECT--TCCHHHHHHHHHHHGGGE--EEEEC-CGGGHHHHHHHHH-HHHHHHHHHHH
T ss_pred CChHHHHcCce---------EEEEeCC--CCCHHHHHHHHHHHHhCC--CEEEe-CHHHccHHHHHhc-cHHHHHHHHHH
Confidence 2444333332 2333322 225788999999999985 34444 332222 222222 11122233344
Q ss_pred HHHHHHHHhCCCHHHHHHHhcC
Q 011654 232 AMSALCEATGADVTQVSHAIGK 253 (480)
Q Consensus 232 E~~~l~~~~Gid~~~v~~~~~~ 253 (480)
.+...+.+.|+|.++..+++..
T Consensus 185 al~~a~~~~Gl~~~~a~~~~~~ 206 (247)
T 3gt0_A 185 AMADAAVLDGMPRNQAYKFAAQ 206 (247)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 4444488999999999998864
No 67
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.62 E-value=2.1e-14 Score=143.30 Aligned_cols=197 Identities=14% Similarity=0.122 Sum_probs=132.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC----CeEEEEeCCHH--HHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK----IEVAVVDISVS--RIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEK 74 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G----~~V~~~D~~~~--~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~ 74 (480)
+|||+|||+|.||.+||..|+++ | ++|++||++++ +++.+++. ++++++++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~-------------------G~~~~~~~~e 80 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKM-------------------GVKLTPHNKE 80 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHH-------------------TCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHc-------------------CCEEeCChHH
Confidence 47899999999999999999998 8 89999999986 77776531 3566778888
Q ss_pred HhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-CccchHHHHHHHHHhcCCCCceeEe
Q 011654 75 HVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VPVKTAEAIEKILTHNSREIKYQIL 153 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~ 153 (480)
+++++|+||+||| |. .+.++++++.+.++++++||..++ ++. +.+.+.+.+..... ..+.
T Consensus 81 ~~~~aDvVilav~-~~--------------~~~~vl~~l~~~l~~~~ivvs~s~gi~~---~~l~~~l~~~~~~~-~vv~ 141 (322)
T 2izz_A 81 TVQHSDVLFLAVK-PH--------------IIPFILDEIGADIEDRHIVVSCAAGVTI---SSIEKKLSAFRPAP-RVIR 141 (322)
T ss_dssp HHHHCSEEEECSC-GG--------------GHHHHHHHHGGGCCTTCEEEECCTTCCH---HHHHHHHHTTSSCC-EEEE
T ss_pred HhccCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEeCCCCCH---HHHHHHHhhcCCCC-eEEE
Confidence 8899999999998 32 257888899999988998887654 342 34666665431111 1222
Q ss_pred eCC---ccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhH--HhHHHHHHHH
Q 011654 154 SNP---EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLA--ANAFLAQRIS 228 (480)
Q Consensus 154 ~~P---e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~--~N~~~~~~ia 228 (480)
..| .....| ..++.++.. .+++..+.++++|+.++ ..++...-....+..+. .|.|.. .
T Consensus 142 ~~p~~p~~~~~g---------~~v~~~g~~--~~~~~~~~v~~ll~~~G--~~~~~~e~~~~~~~a~~g~gpa~~~---~ 205 (322)
T 2izz_A 142 CMTNTPVVVREG---------ATVYATGTH--AQVEDGRLMEQLLSSVG--FCTEVEEDLIDAVTGLSGSGPAYAF---T 205 (322)
T ss_dssp EECCGGGGGTCE---------EEEEEECTT--CCHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHTTTHHHHHH---H
T ss_pred EeCCcHHHHcCC---------eEEEEeCCC--CCHHHHHHHHHHHHhCC--CEEEeCHHHHHHHHHHhcCHHHHHH---H
Confidence 233 222222 135556542 24678899999999984 35554422223333433 244443 3
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHhcC
Q 011654 229 SVNAMSALCEATGADVTQVSHAIGK 253 (480)
Q Consensus 229 ~~nE~~~l~~~~Gid~~~v~~~~~~ 253 (480)
+++.++..+.+.|+|.+.+.+++..
T Consensus 206 ~~eala~a~~~~Gl~~~~a~~l~~~ 230 (322)
T 2izz_A 206 ALDALADGGVKMGLPRRLAVRLGAQ 230 (322)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4555555678999999988887754
No 68
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.61 E-value=3.3e-14 Score=140.80 Aligned_cols=206 Identities=13% Similarity=0.121 Sum_probs=142.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC------------CCCCCCCCChHHHHHhhcCCCEEEe
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG------------DQLPIYEPGLEDVVTQCRGRNLFFS 69 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~------------~~~~~~e~~l~~l~~~~~~~~l~~t 69 (480)
.||+|||+|.||..+|..++.+ |++|+++|++++.++...+ +... .....++.+ .+++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~l-----~~i~~~ 78 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLK-GSLSAEEQL-----SLISSC 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCC-SSSCHHHHH-----HTEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC-CccCHHHHH-----hhcccc
Confidence 5899999999999999999998 9999999999986554321 1111 011222222 368899
Q ss_pred cCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEE-ecCCccchHHHHHHHHHhcCCCC
Q 011654 70 TDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVE-KSTVPVKTAEAIEKILTHNSREI 148 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~~~~~g~ 148 (480)
+|+++++++||+|+.|||.. .++ -++++++|.+++++++|+.. +|++++.. ++..+..- .
T Consensus 79 ~~l~~a~~~ad~ViEav~E~-----------l~i--K~~lf~~l~~~~~~~aIlaSNTSsl~is~---ia~~~~~p---~ 139 (319)
T 3ado_A 79 TNLAEAVEGVVHIQECVPEN-----------LDL--KRKIFAQLDSIVDDRVVLSSSSSCLLPSK---LFTGLAHV---K 139 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSC-----------HHH--HHHHHHHHHTTCCSSSEEEECCSSCCHHH---HHTTCTTG---G
T ss_pred cchHhHhccCcEEeeccccH-----------HHH--HHHHHHHHHHHhhhcceeehhhhhccchh---hhhhccCC---C
Confidence 99999999999999999863 333 48899999999999998743 34555432 22111110 1
Q ss_pred ceeE--eeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEe-CChhHHHHhhhHHhHHHHH
Q 011654 149 KYQI--LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIIT-TNLWSAELSKLAANAFLAQ 225 (480)
Q Consensus 149 ~~~v--~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~-~~~~~ae~~Kl~~N~~~~~ 225 (480)
.|.. .++|....+- . -| +.+..| ++++++.+..++..+++ .++.+ .+ ...++.| .+
T Consensus 140 r~ig~HffNP~~~m~L------V---Ei-v~g~~T--s~~~~~~~~~~~~~~gk-~pv~v~kd-----~pGFi~N---Rl 198 (319)
T 3ado_A 140 QCIVAHPVNPPYYIPL------V---EL-VPHPET--SPATVDRTHALMRKIGQ-SPVRVLKE-----IDGFVLN---RL 198 (319)
T ss_dssp GEEEEEECSSTTTCCE------E---EE-EECTTC--CHHHHHHHHHHHHHTTC-EEEECSSC-----CTTTTHH---HH
T ss_pred cEEEecCCCCccccch------H---Hh-cCCCCC--cHHHHHHHHHHHHHhCC-ccCCcCCC-----CCCEeHH---HH
Confidence 1111 1344433321 0 24 455433 79999999999999863 44544 33 3457778 56
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHhcCCC
Q 011654 226 RISSVNAMSALCEATGADVTQVSHAIGKDT 255 (480)
Q Consensus 226 ~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ 255 (480)
..++++|...+.+..+++++++..++....
T Consensus 199 ~~~~~~EA~~lv~eGvas~edID~~~~~g~ 228 (319)
T 3ado_A 199 QYAIISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 699999999999999999999999987653
No 69
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.59 E-value=3.6e-14 Score=140.07 Aligned_cols=223 Identities=14% Similarity=0.114 Sum_probs=144.9
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+||| +|.||.++|..|++. |++|++||++++ ++..+++++||
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~--------------------------------~~~~~~~~~aD 67 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDW--------------------------------AVAESILANAD 67 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCG--------------------------------GGHHHHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCcc--------------------------------cCHHHHhcCCC
Confidence 5899999 999999999999988 999999998753 13445688999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||.+ .+.++++++.++++++++|++.+++.....+.+.+.+ . .. ++..+|.+..
T Consensus 68 vVilavp~~---------------~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~--~~-~v~~hP~~g~ 126 (298)
T 2pv7_A 68 VVIVSVPIN---------------LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH---T--GA-VLGLHPMFGA 126 (298)
T ss_dssp EEEECSCGG---------------GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---S--SE-EEEEEECSCT
T ss_pred EEEEeCCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---C--CC-EEeeCCCCCC
Confidence 999999853 1577888999999999999988887766555443332 1 12 3444564332
Q ss_pred ccccccccCCCC-eEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCCh-hHHHHhhhHHhHHHHHHHHHHHHHHHHHH
Q 011654 161 EGTAIQDLFNPD-RVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNL-WSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 161 ~G~a~~~~~~~~-~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
+. ..+... .++..+. +++..+.++++|+.++ ..++.++. ...++++++.+....+.+++++.+..
T Consensus 127 ~~----~~~~g~~~~l~~~~----~~~~~~~v~~l~~~~G--~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~--- 193 (298)
T 2pv7_A 127 DI----ASMAKQVVVRCDGR----FPERYEWLLEQIQIWG--AKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSK--- 193 (298)
T ss_dssp TC----SCCTTCEEEEEEEE----CGGGTHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---
T ss_pred Cc----hhhcCCeEEEecCC----CHHHHHHHHHHHHHcC--CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 22 122222 2333332 3567889999999984 46666554 45889999999877777777776542
Q ss_pred HhCCCHHHHHHHhcCCCCCCCccccCCCCCcccchhhhHHH-HHHHHHHcCCchhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 011654 239 ATGADVTQVSHAIGKDTRIGPRFLNSSVGFGGSCFQKDILN-LVYICECNGLTEVANYWKQVIKVNDYQKNRFVNRIVSS 317 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~cl~kD~~~-l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
.|.+.++..+.+. .|| +|... +..++ +.+ +.+|......|..... .++.+.+.
T Consensus 194 -~g~~~~~~~~la~-------------~~f------~~~~~~~~ria---~~~--p~~~~di~~sn~~~~~-~l~~~~~~ 247 (298)
T 2pv7_A 194 -QPINLANLLALSS-------------PIY------RLELAMIGRLF---AQD--AELYADIIMDKSENLA-VIETLKQT 247 (298)
T ss_dssp -SSCCHHHHHHTCC-------------HHH------HHHHHHHHHHH---TSC--HHHHHHHHC----CHH-HHHHHHHH
T ss_pred -cCCCHHHHHhhcC-------------HHH------HHHHHHHHHHh---cCC--HHHHHHHHHHCHHHHH-HHHHHHHH
Confidence 7777766555332 112 33222 23333 333 5677777777777766 66665554
Q ss_pred h
Q 011654 318 M 318 (480)
Q Consensus 318 l 318 (480)
|
T Consensus 248 l 248 (298)
T 2pv7_A 248 Y 248 (298)
T ss_dssp H
T ss_pred H
Confidence 4
No 70
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.59 E-value=1.6e-14 Score=143.95 Aligned_cols=247 Identities=17% Similarity=0.155 Sum_probs=154.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+.+|..|+++ |++|++| +++++++.+++.+..+..++... ..++.+++++++ +.++|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~------~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDE------QVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEE------EECCEEESCGGG-GTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcE------EEeeeeeCCHHH-cCCCC
Confidence 48999999999999999999998 9999999 99999999986432222222110 123567788765 68999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHH-hcCCCCceeEeeCCccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILT-HNSREIKYQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~-~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||+. .++++++.+.++++++++|+.. +...+..+.+.+.+. +...+. +..+-.+.
T Consensus 89 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~-~nGi~~~~~l~~~~~~~vl~g~---~~~~a~~~ 149 (318)
T 3hwr_A 89 LVLFCVKST---------------DTQSAALAMKPALAKSALVLSL-QNGVENADTLRSLLEQEVAAAV---VYVATEMA 149 (318)
T ss_dssp EEEECCCGG---------------GHHHHHHHHTTTSCTTCEEEEE-CSSSSHHHHHHHHCCSEEEEEE---EEEEEEEE
T ss_pred EEEEEcccc---------------cHHHHHHHHHHhcCCCCEEEEe-CCCCCcHHHHHHHcCCcEEEEE---EEEeEEEc
Confidence 999999853 2578899999999988877654 334444455666553 211010 00111122
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhH------------------
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANA------------------ 221 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------ 221 (480)
+|+.+.+... .++.+|.. +..+.+.++|+... .......|+...+|.|++-|+
T Consensus 150 gP~~~~~~~~--g~~~ig~~------~~~~~l~~~l~~~~-~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~ 220 (318)
T 3hwr_A 150 GPGHVRHHGR--GELVIEPT------SHGANLAAIFAAAG-VPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVR 220 (318)
T ss_dssp ETTEEEEEEE--EEEEECCC------TTTHHHHHHHHHTT-CCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTT
T ss_pred CCeEEEEcCC--ceEEEcCC------HHHHHHHHHHHhCC-CCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhc
Confidence 3333322111 13456752 23467888888753 123455799999999999886
Q ss_pred ---HHHHHHHHHHHHHHHHHHhCCCH-----HHHHHHhcCCCCC-CCccc--cCCCCCcccchhhh--HHHHHHHHHHcC
Q 011654 222 ---FLAQRISSVNAMSALCEATGADV-----TQVSHAIGKDTRI-GPRFL--NSSVGFGGSCFQKD--ILNLVYICECNG 288 (480)
Q Consensus 222 ---~~~~~ia~~nE~~~l~~~~Gid~-----~~v~~~~~~~~~~-~~~~~--~pg~g~gg~cl~kD--~~~l~~~a~~~g 288 (480)
.+.+....+.|+..++++.|+++ +.+++.+...+.. ++++- .-| .-.--| ..++++.++++|
T Consensus 221 ~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~~~g-----r~tEid~i~G~vv~~a~~~g 295 (318)
T 3hwr_A 221 GEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMPRQSSSTAQDLARG-----KRSEIDHLNGLIVRRGDALG 295 (318)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSTTCCCHHHHHHHTT-----CCCSGGGTHHHHHHHHHHTT
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCCCcHHHHHHHcC-----ChhHHHHHHHHHHHHHHHhC
Confidence 24566789999999999999763 3344433322111 11110 111 111112 237888999999
Q ss_pred Cc
Q 011654 289 LT 290 (480)
Q Consensus 289 ~~ 290 (480)
++
T Consensus 296 v~ 297 (318)
T 3hwr_A 296 IP 297 (318)
T ss_dssp CC
T ss_pred CC
Confidence 98
No 71
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.58 E-value=2e-13 Score=135.61 Aligned_cols=255 Identities=15% Similarity=0.092 Sum_probs=156.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++....+..+.- ...-..+.+++++++ +..+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g-----~~~~~~~~~~~~~~~-~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSING-----DFTLPHVKGYRAPEE-IGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTC-----CEEESCCCEESCHHH-HCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCC-----eEEEeeceeecCHHH-cCCCCE
Confidence 7999999999999999999998 99999999986 3777653322110000 000002345677765 789999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccccc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||... +.++++.+.+++.++++|+.. +...+..+.+.+.+.+... ....+..+-.+.+|
T Consensus 73 vilavk~~~---------------~~~~l~~l~~~l~~~~~iv~l-~nGi~~~~~l~~~~~~~~v-~~~~~~~~a~~~~p 135 (312)
T 3hn2_A 73 VLVGLKTFA---------------NSRYEELIRPLVEEGTQILTL-QNGLGNEEALATLFGAERI-IGGVAFLCSNRGEP 135 (312)
T ss_dssp EEECCCGGG---------------GGGHHHHHGGGCCTTCEEEEC-CSSSSHHHHHHHHTCGGGE-EEEEEEEECCBCSS
T ss_pred EEEecCCCC---------------cHHHHHHHHhhcCCCCEEEEe-cCCCCcHHHHHHHCCCCcE-EEEEEEeeeEEcCC
Confidence 999998532 356788999999988877643 2334444556665543210 00011122234455
Q ss_pred cccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhH--------------------
Q 011654 162 GTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANA-------------------- 221 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~-------------------- 221 (480)
|...+. .+..+.+|..+.. +.+..+.+.++|+...- ......|+...+|.|++-|+
T Consensus 136 ~~v~~~--~~g~~~ig~~~~~-~~~~~~~l~~~l~~~g~-~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~ 211 (312)
T 3hn2_A 136 GEVHHL--GAGRIILGEFLPR-DTGRIEELAAMFRQAGV-DCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARD 211 (312)
T ss_dssp SEEEEC--EEEEEEEEESSCC-CSHHHHHHHHHHHHTTC-CEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSH
T ss_pred cEEEEC--CCCeEEEecCCCC-ccHHHHHHHHHHHhCCC-CcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhCh
Confidence 555332 1335778865322 24567788899987531 23445799999999999886
Q ss_pred -HHHHHHHHHHHHHHHHHHhC--CC-----HHHHHHHhcCCCCCCCccc-cCCCCCcccchhhhH--HHHHHHHHHcCCc
Q 011654 222 -FLAQRISSVNAMSALCEATG--AD-----VTQVSHAIGKDTRIGPRFL-NSSVGFGGSCFQKDI--LNLVYICECNGLT 290 (480)
Q Consensus 222 -~~~~~ia~~nE~~~l~~~~G--id-----~~~v~~~~~~~~~~~~~~~-~pg~g~gg~cl~kD~--~~l~~~a~~~g~~ 290 (480)
.+.+....+.|+..+++++| ++ .+.+++.....++..+.++ +- --|.-.--|. .++++.|+++|++
T Consensus 212 ~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~~sSM~qD~---~~gr~tEid~i~G~vv~~a~~~gv~ 288 (312)
T 3hn2_A 212 VSRKLVRGIMLEVIAGANAQGLATFIADGYVDDMLEFTDAMGEYKPSMEIDR---EEGRPLEIAAIFRTPLAYGAREGIA 288 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHHHHHTTSCSCCCHHHHHH---HTTCCCCHHHHTHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHhcCCCCCchHHHHH---HhCCCccHHHHhhHHHHHHHHhCCC
Confidence 35556778999999999999 65 3445555443322111111 00 0011112222 3678889999998
No 72
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=8.9e-14 Score=139.35 Aligned_cols=185 Identities=12% Similarity=0.104 Sum_probs=125.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc---
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--- 77 (480)
++||+|||+|.||.+||..|.++ |++|++||+++++.+.+.+. ++..+++++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-------------------G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-------------------GFDVSADLEATLQRAA 66 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-------------------TCCEESCHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeeeCCHHHHHHhcc
Confidence 37899999999999999999998 99999999999988876642 2345677777665
Q ss_pred -cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCC
Q 011654 78 -EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNP 156 (480)
Q Consensus 78 -~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
++|+||+|||. ..+.++++++.+. +++++|++.+++.+...+.+.+.+.. .. ++..+|
T Consensus 67 ~~aDlVilavP~---------------~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~~----~~-~v~~HP 125 (341)
T 3ktd_A 67 AEDALIVLAVPM---------------TAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNMQ----HR-YVGSHP 125 (341)
T ss_dssp HTTCEEEECSCH---------------HHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTCG----GG-EECEEE
T ss_pred cCCCEEEEeCCH---------------HHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCCC----Cc-EecCCc
Confidence 47999999983 2357778888886 78899998888877666655543321 11 344455
Q ss_pred cc----ccccccccccCCCCeEEEEeCCCcchHH--------HHHHHHHHHhccCCCCeEEeCCh-hHHHHhhhHHhHHH
Q 011654 157 EF----LAEGTAIQDLFNPDRVLIGGRETPEGQK--------AIQALKDVYAHWVPEDRIITTNL-WSAELSKLAANAFL 223 (480)
Q Consensus 157 e~----~~~G~a~~~~~~~~~vviG~~~~~~~~~--------~~~~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~ 223 (480)
.. .++..+..+++....+++- +....+++ .++.++++|+.++ ..++.+++ ..-..+.++...-.
T Consensus 126 maG~e~sG~~aa~~~Lf~g~~~ilt-p~~~~~~e~~~~~~~~~~~~v~~l~~~~G--a~v~~~~~~~HD~~~A~vshlPh 202 (341)
T 3ktd_A 126 MAGTANSGWSASMDGLFKRAVWVVT-FDQLFDGTDINSTWISIWKDVVQMALAVG--AEVVPSRVGPHDAAAARVSHLTH 202 (341)
T ss_dssp CCSCC-CCGGGCCSSTTTTCEEEEC-CGGGTSSCCCCHHHHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHH
T ss_pred cccccccchhhhhhHHhcCCeEEEE-eCCCCChhhhccchHHHHHHHHHHHHHcC--CEEEEeCHHHHHHHHHHHhHHHH
Confidence 44 3444445566655434432 21122345 7889999999985 35666654 45567777776555
Q ss_pred HHHHHHH
Q 011654 224 AQRISSV 230 (480)
Q Consensus 224 ~~~ia~~ 230 (480)
.+..+++
T Consensus 203 ~ia~aL~ 209 (341)
T 3ktd_A 203 ILAETLA 209 (341)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 73
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.56 E-value=1.5e-13 Score=136.89 Aligned_cols=253 Identities=16% Similarity=0.142 Sum_probs=155.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCC---CCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIY---EPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~---e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++....+. ..+.. . ..+.++++++++.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~-----~--~~~~~~~~~~~~~~~ 71 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD--YETVKAKGIRIRSATLGDYT-----F--RPAAVVRSAAELETK 71 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT--HHHHHHHCEEEEETTTCCEE-----E--CCSCEESCGGGCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh--HHHHHhCCcEEeecCCCcEE-----E--eeeeeECCHHHcCCC
Confidence 7999999999999999999998 99999999986 366664321111 00000 0 023456787775558
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||+.. +.++++.+.++++++++|+... ...+..+.+.+.+... .++++|.+
T Consensus 72 ~DlVilavK~~~---------------~~~~l~~l~~~l~~~t~Iv~~~-nGi~~~~~l~~~~~~~------~vl~g~~~ 129 (320)
T 3i83_A 72 PDCTLLCIKVVE---------------GADRVGLLRDAVAPDTGIVLIS-NGIDIEPEVAAAFPDN------EVISGLAF 129 (320)
T ss_dssp CSEEEECCCCCT---------------TCCHHHHHTTSCCTTCEEEEEC-SSSSCSHHHHHHSTTS------CEEEEEEE
T ss_pred CCEEEEecCCCC---------------hHHHHHHHHhhcCCCCEEEEeC-CCCChHHHHHHHCCCC------cEEEEEEE
Confidence 999999998643 2356788999998888776432 2333335555554432 23334432
Q ss_pred -----ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHH-----------
Q 011654 159 -----LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAF----------- 222 (480)
Q Consensus 159 -----~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~----------- 222 (480)
..||...+. .+..+.+|..+.. +.+..+.+.++|+... ....+..|+...+|.|++.|+-
T Consensus 130 ~~a~~~~pg~v~~~--~~~~~~ig~~~~~-~~~~~~~l~~~l~~~~-~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~ 205 (320)
T 3i83_A 130 IGVTRTAPGEIWHQ--AYGRLMLGNYPGG-VSERVKTLAAAFEEAG-IDGIATENITTARWQKCVWNAAFNPLSVLSGGL 205 (320)
T ss_dssp EEEEEEETTEEEEE--EEEEEEEEESSSC-CCHHHHHHHHHHHHTT-SCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred eceEEcCCCEEEEC--CCCEEEEecCCCC-ccHHHHHHHHHHHhCC-CCceECHHHHHHHHHHHHHHHhhhHHHHHHCCC
Confidence 334443322 2346778864222 2456788889998753 1234557999999999998851
Q ss_pred ---------HHHHHHHHHHHHHHHHHhCCCH-----HHHHHHhcCCCCCCCccc-cCCCCCcccchhhhH--HHHHHHHH
Q 011654 223 ---------LAQRISSVNAMSALCEATGADV-----TQVSHAIGKDTRIGPRFL-NSSVGFGGSCFQKDI--LNLVYICE 285 (480)
Q Consensus 223 ---------~~~~ia~~nE~~~l~~~~Gid~-----~~v~~~~~~~~~~~~~~~-~pg~g~gg~cl~kD~--~~l~~~a~ 285 (480)
+.+....+.|+..++++.|++. +.+++.....++..+.++ +- --|.-.--|. .++++.++
T Consensus 206 ~g~~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~---~~gr~tEid~i~G~vv~~a~ 282 (320)
T 3i83_A 206 DTLDILSTQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPYKTSMLVDF---EAGQPMETEVILGNAVRAGR 282 (320)
T ss_dssp CHHHHHHHCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSCCCCCHHHHHH---HHTCCCCHHHHTHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhcCCCCCCcHHHHH---HhCCCchHHHHccHHHHHHH
Confidence 4456779999999999999863 344444332221111111 00 0011111222 37788999
Q ss_pred HcCCchhhhHH
Q 011654 286 CNGLTEVANYW 296 (480)
Q Consensus 286 ~~g~~~~~~~~ 296 (480)
++|++ .|+.
T Consensus 283 ~~gv~--~P~~ 291 (320)
T 3i83_A 283 RTRVA--IPHL 291 (320)
T ss_dssp HTTCC--CHHH
T ss_pred HhCCC--CCHH
Confidence 99998 4543
No 74
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.54 E-value=9.8e-14 Score=133.88 Aligned_cols=194 Identities=10% Similarity=0.154 Sum_probs=126.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++. |++|.+||+++++.+.+.+.. ++..+++++++++++|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~D 62 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQL------------------ALPYAMSHQDLIDQVD 62 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHH------------------TCCBCSSHHHHHHTCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHc------------------CCEeeCCHHHHHhcCC
Confidence 68999999999999999999987 899999999999988876420 1334577888888999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEe-cCCccchHHHHHHHHHhcCCCCcee--EeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEK-STVPVKTAEAIEKILTHNSREIKYQ--ILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~--v~~~Pe 157 (480)
+||+|+| +. .+.++++. ++++++|+.. +++++. .+.+.+... ..+. +...|.
T Consensus 63 ~Vi~~v~-~~--------------~~~~v~~~----l~~~~~vv~~~~~~~~~---~l~~~~~~~---~~~v~~~p~~~~ 117 (259)
T 2ahr_A 63 LVILGIK-PQ--------------LFETVLKP----LHFKQPIISMAAGISLQ---RLATFVGQD---LPLLRIMPNMNA 117 (259)
T ss_dssp EEEECSC-GG--------------GHHHHHTT----SCCCSCEEECCTTCCHH---HHHHHHCTT---SCEEEEECCGGG
T ss_pred EEEEEeC-cH--------------hHHHHHHH----hccCCEEEEeCCCCCHH---HHHHhcCCC---CCEEEEcCCchH
Confidence 9999998 32 12334333 4477877766 356554 344444421 1221 111222
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
....|. ..++.|+. .+++..+.++++|+.++ ..++........++|+..+.. +....+++.++..+
T Consensus 118 ~~~~g~--------~~i~~~~~---~~~~~~~~~~~ll~~~G--~~~~~~~~~~d~~~al~g~~~-~~~~~~~~~la~~~ 183 (259)
T 2ahr_A 118 QILQSS--------TALTGNAL---VSQELQARVRDLTDSFG--STFDISEKDFDTFTALAGSSP-AYIYLFIEALAKAG 183 (259)
T ss_dssp GGTCEE--------EEEEECTT---CCHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHHTTHH-HHHHHHHHHHHHHH
T ss_pred HHcCce--------EEEEcCCC---CCHHHHHHHHHHHHhCC--CEEEecHHHccHHHHHhccHH-HHHHHHHHHHHHHH
Confidence 222221 12333321 24788999999999984 344455556677777753221 12345566666679
Q ss_pred HHhCCCHHHHHHHhcC
Q 011654 238 EATGADVTQVSHAIGK 253 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~ 253 (480)
.+.|+|.+++.+++..
T Consensus 184 ~~~Gl~~~~~~~~~~~ 199 (259)
T 2ahr_A 184 VKNGIPKAKALEIVTQ 199 (259)
T ss_dssp HHTTCCHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHH
Confidence 9999999999988764
No 75
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.54 E-value=6.4e-13 Score=129.92 Aligned_cols=193 Identities=14% Similarity=0.187 Sum_probs=127.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC---eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI---EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~---~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+++ |+ +|++||+++++.+.+.+. -+++.+++..+++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~------------------~gi~~~~~~~~~~~~ 63 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEK------------------CGVHTTQDNRQGALN 63 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHT------------------TCCEEESCHHHHHSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHH------------------cCCEEeCChHHHHhc
Confidence 7899999999999999999998 88 999999999999888753 135677888888999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhh-CCCCCEEEEe-cCCccchHHHHHHHHHhcCCCCceeEeeCC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANV-SNSNKIVVEK-STVPVKTAEAIEKILTHNSREIKYQILSNP 156 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~-l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
+|+||+|||. . .+.++++++.++ ++++++|+.. ++++ .+.+.+.+.... .+ +-..|
T Consensus 64 aDvVilav~p-~--------------~~~~vl~~l~~~~l~~~~iiiS~~agi~---~~~l~~~l~~~~---~v-vr~mP 121 (280)
T 3tri_A 64 ADVVVLAVKP-H--------------QIKMVCEELKDILSETKILVISLAVGVT---TPLIEKWLGKAS---RI-VRAMP 121 (280)
T ss_dssp CSEEEECSCG-G--------------GHHHHHHHHHHHHHTTTCEEEECCTTCC---HHHHHHHHTCCS---SE-EEEEC
T ss_pred CCeEEEEeCH-H--------------HHHHHHHHHHhhccCCCeEEEEecCCCC---HHHHHHHcCCCC---eE-EEEec
Confidence 9999999973 1 257888899888 8888777632 2233 345665554321 11 22233
Q ss_pred c---cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChh-HHHHhhh--HHhHHHHHHHHHH
Q 011654 157 E---FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLW-SAELSKL--AANAFLAQRISSV 230 (480)
Q Consensus 157 e---~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~-~ae~~Kl--~~N~~~~~~ia~~ 230 (480)
. ..+.|. ..+..+. ..+++..+.++++|+.++ ..+++.+.. -...+-+ ..+.|....+..+
T Consensus 122 n~p~~v~~g~---------~~l~~~~--~~~~~~~~~v~~l~~~iG--~~~~v~~E~~~d~~talsgsgpa~~~~~~eal 188 (280)
T 3tri_A 122 NTPSSVRAGA---------TGLFANE--TVDKDQKNLAESIMRAVG--LVIWVSSEDQIEKIAALSGSGPAYIFLIMEAL 188 (280)
T ss_dssp CGGGGGTCEE---------EEEECCT--TSCHHHHHHHHHHHGGGE--EEEECSSHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred CChHHhcCcc---------EEEEeCC--CCCHHHHHHHHHHHHHCC--CeEEECCHHHhhHHHHHhccHHHHHHHHHHHH
Confidence 2 222221 2233332 236789999999999985 345453321 1112222 2244554444444
Q ss_pred HHHHHHHHHhCCCHHHHHHHhc
Q 011654 231 NAMSALCEATGADVTQVSHAIG 252 (480)
Q Consensus 231 nE~~~l~~~~Gid~~~v~~~~~ 252 (480)
. .-+.+.|++.++..+++.
T Consensus 189 ~---~a~v~~Gl~~~~a~~l~~ 207 (280)
T 3tri_A 189 Q---EAAEQLGLTKETAELLTE 207 (280)
T ss_dssp H---HHHHHTTCCHHHHHHHHH
T ss_pred H---HHHHHcCCCHHHHHHHHH
Confidence 3 446789999998888765
No 76
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.54 E-value=1.2e-13 Score=129.01 Aligned_cols=186 Identities=15% Similarity=0.089 Sum_probs=126.5
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+||| +|.||..+|..|+++ |++|+++|+++++.+.+.+.. ...+ ....+.. +++.++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~--------~~~~---~~~~~~~-~~~~~~~~~~D 66 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEY--------RRIA---GDASITG-MKNEDAAEACD 66 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHH--------HHHH---SSCCEEE-EEHHHHHHHCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--------cccc---ccCCCCh-hhHHHHHhcCC
Confidence 7999999 999999999999988 899999999999888776420 0000 0123553 56777789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-Ccc-----------chHHHHHHHHHhcCCCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VPV-----------KTAEAIEKILTHNSREI 148 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~-----------gt~~~l~~~l~~~~~g~ 148 (480)
+||+|+|.+ .+.++++++.+.++ +++|++.++ +++ ...+.+++.+.. .
T Consensus 67 ~Vi~~~~~~---------------~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~ 126 (212)
T 1jay_A 67 IAVLTIPWE---------------HAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----E 126 (212)
T ss_dssp EEEECSCHH---------------HHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----S
T ss_pred EEEEeCChh---------------hHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----C
Confidence 999998742 24566777776664 888888776 442 225667666642 1
Q ss_pred ceeEeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhcc-CCCCeEEeCChhHHHHhhhHHhHHHHHHH
Q 011654 149 KYQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHW-VPEDRIITTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
.+.-++.|.......... ......++++++ +++..+.+.++|+.+ +. ..++..+.+.+.+.|.+.|.+..+..
T Consensus 127 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~g~----~~~~~~~v~~l~~~~~G~-~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 127 KVVSALHTIPAARFANLD-EKFDWDVPVCGD----DDESKKVVMSLISEIDGL-RPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp CEEECCTTCCHHHHHCTT-CCCCEEEEEEES----CHHHHHHHHHHHHHSTTE-EEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred eEEEEccchHHHHhhCcC-CCCCccEEEECC----cHHHHHHHHHHHHHcCCC-CceeccchhHHHHhcchHHHHHHHHH
Confidence 233334465444332211 111113456665 378899999999998 63 34567789999999999998776543
No 77
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.53 E-value=9.7e-14 Score=134.10 Aligned_cols=190 Identities=10% Similarity=0.166 Sum_probs=119.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPK-IEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||.++|..|+++ | ++|++||+++++.+.+.+. -+++.++++.+++ ++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~------------------~g~~~~~~~~~~~-~~D 59 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKE------------------LGVETSATLPELH-SDD 59 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHH------------------TCCEEESSCCCCC-TTS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHh------------------cCCEEeCCHHHHh-cCC
Confidence 7999999999999999999998 8 9999999999999887642 0245566777777 999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEe-cCCccchHHHHHHHHHhcCCCCcee-Eee-CCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEK-STVPVKTAEAIEKILTHNSREIKYQ-ILS-NPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~-v~~-~Pe 157 (480)
+||+||| + ..+.++++++.+ + +++|++. |++++ +.+.+.+.+ +..+. ... .|.
T Consensus 60 ~vi~~v~-~--------------~~~~~v~~~l~~--~-~~ivv~~~~g~~~---~~l~~~~~~---~~~~v~~~~~~~~ 115 (263)
T 1yqg_A 60 VLILAVK-P--------------QDMEAACKNIRT--N-GALVLSVAAGLSV---GTLSRYLGG---TRRIVRVMPNTPG 115 (263)
T ss_dssp EEEECSC-H--------------HHHHHHHTTCCC--T-TCEEEECCTTCCH---HHHHHHTTS---CCCEEEEECCGGG
T ss_pred EEEEEeC-c--------------hhHHHHHHHhcc--C-CCEEEEecCCCCH---HHHHHHcCC---CCcEEEEcCCHHH
Confidence 9999998 3 234566655544 4 7888876 66665 445554433 11221 111 132
Q ss_pred cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeC-ChhHHHHhhhH--HhHHHHHHHHHHHHHH
Q 011654 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITT-NLWSAELSKLA--ANAFLAQRISSVNAMS 234 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~--~N~~~~~~ia~~nE~~ 234 (480)
....|.. .++.|+ ..+++..+.++++|+.++ ..++.. +-.-..++-+. .+.+.. .++..+.
T Consensus 116 ~~~~g~~--------~i~~~~---~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~al~g~~~~~~~---~~~~~l~ 179 (263)
T 1yqg_A 116 KIGLGVS--------GMYAEA---EVSETDRRIADRIMKSVG--LTVWLDDEEKMHGITGISGSGPAYVF---YLLDALQ 179 (263)
T ss_dssp GGTCEEE--------EEECCT---TSCHHHHHHHHHHHHTTE--EEEECSSTTHHHHHHHHTTSHHHHHH---HHHHHHH
T ss_pred HHcCceE--------EEEcCC---CCCHHHHHHHHHHHHhCC--CEEEeCChhhccHHHHHHccHHHHHH---HHHHHHH
Confidence 2222211 233332 124788999999999874 345444 21112222221 233333 3334444
Q ss_pred HHHHHhCCCHHHHHHHhc
Q 011654 235 ALCEATGADVTQVSHAIG 252 (480)
Q Consensus 235 ~l~~~~Gid~~~v~~~~~ 252 (480)
..+++.|++.+++.+++.
T Consensus 180 e~~~~~G~~~~~~~~~~~ 197 (263)
T 1yqg_A 180 NAAIRQGFDMAEARALSL 197 (263)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHH
Confidence 458899999988888763
No 78
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.52 E-value=3.5e-13 Score=130.13 Aligned_cols=187 Identities=12% Similarity=0.124 Sum_probs=122.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCC----CeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPK----IEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G----~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
|||+|||+|.||.++|..|+++ | ++|++||+++++ . +++.++++.++++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~-----~--------------------g~~~~~~~~~~~~ 57 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN-----T--------------------TLNYMSSNEELAR 57 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS-----S--------------------SSEECSCHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc-----C--------------------ceEEeCCHHHHHh
Confidence 7999999999999999999988 8 799999998764 1 2455678888889
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCce-eE-eeC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKY-QI-LSN 155 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~-~v-~~~ 155 (480)
++|+||+|||.. .+.++++++.+.++++.+|.+.+++++. .+.+.+.+.. .+ .+ ...
T Consensus 58 ~~D~vi~~v~~~---------------~~~~v~~~l~~~l~~~~vv~~~~gi~~~---~l~~~~~~~~---~~v~~~p~~ 116 (262)
T 2rcy_A 58 HCDIIVCAVKPD---------------IAGSVLNNIKPYLSSKLLISICGGLNIG---KLEEMVGSEN---KIVWVMPNT 116 (262)
T ss_dssp HCSEEEECSCTT---------------THHHHHHHSGGGCTTCEEEECCSSCCHH---HHHHHHCTTS---EEEEEECCG
T ss_pred cCCEEEEEeCHH---------------HHHHHHHHHHHhcCCCEEEEECCCCCHH---HHHHHhCCCC---cEEEECCCh
Confidence 999999999832 1467888888888544455556677664 3444443310 11 11 123
Q ss_pred CccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHH--hHHHHHHHHHHHHH
Q 011654 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAA--NAFLAQRISSVNAM 233 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~--N~~~~~~ia~~nE~ 233 (480)
|.....| ..++.++.. .+++..+.++++|+.++ ..++..+-....++++.. |.+. ..++..+
T Consensus 117 p~~~~~g---------~~~~~~~~~--~~~~~~~~~~~ll~~~G--~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~al 180 (262)
T 2rcy_A 117 PCLVGEG---------SFIYCSNKN--VNSTDKKYVNDIFNSCG--IIHEIKEKDMDIATAISGCGPAYV---YLFIESL 180 (262)
T ss_dssp GGGGTCE---------EEEEEECTT--CCHHHHHHHHHHHHTSE--EEEECCGGGHHHHHHHTTSHHHHH---HHHHHHH
T ss_pred HHHHcCC---------eEEEEeCCC--CCHHHHHHHHHHHHhCC--CEEEeCHHHccHHHHHHccHHHHH---HHHHHHH
Confidence 3333222 123444431 24788999999999884 344444333444555533 4443 4444455
Q ss_pred HHHHHHhCCCHHHHHHHhc
Q 011654 234 SALCEATGADVTQVSHAIG 252 (480)
Q Consensus 234 ~~l~~~~Gid~~~v~~~~~ 252 (480)
...+.+.|++.+++.+.+.
T Consensus 181 ~~~~~~~Gl~~~~~~~~~~ 199 (262)
T 2rcy_A 181 IDAGVKNGLSRELSKNLVL 199 (262)
T ss_dssp HHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHH
Confidence 5567899999988877765
No 79
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.48 E-value=4.1e-12 Score=130.63 Aligned_cols=218 Identities=15% Similarity=0.110 Sum_probs=131.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHH-cCCCCeEEEEe---CCHHHHHHH-HCCCCC--CCCCChHHHHHhhcCCCE-EEecCH
Q 011654 1 MVKICCIGAGYVGGPTMAVIAL-KCPKIEVAVVD---ISVSRIAAW-NGDQLP--IYEPGLEDVVTQCRGRNL-FFSTDI 72 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~-~~~G~~V~~~D---~~~~~v~~l-~~~~~~--~~e~~l~~l~~~~~~~~l-~~t~d~ 72 (480)
||||+|||+|.||+++|..|++ + |++|++|| +++++++.+ +++... ..+++.+.. . ...++ .+++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~--~-~~~~~~~~~~~~ 76 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQT--E-VKSRPKVITKDP 76 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEE--E-EEECCSEEESCH
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccc--e-eeccceEEeCCH
Confidence 4899999999999999999987 5 89999999 988888884 443211 111110000 0 00123 378899
Q ss_pred HHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeE
Q 011654 73 EKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQI 152 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v 152 (480)
+++++++|+||+|||++. +.++++++.++++++++|+.. +...|......+.+.+.... ....
T Consensus 77 ~~a~~~aD~Vilav~~~~---------------~~~v~~~l~~~l~~~~ivv~~-~~~~G~~~~~~~~l~~~~~~-~v~~ 139 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFA---------------HEGYFQAMAPYVQDSALIVGL-PSQAGFEFQCRDILGDKAAA-VSMM 139 (404)
T ss_dssp HHHHTTCSEEEECSCGGG---------------HHHHHHHHTTTCCTTCEEEET-TCCTTHHHHHHHHHGGGGGT-SEEE
T ss_pred HHHhCCCCEEEEeCchHH---------------HHHHHHHHHhhCCCCcEEEEc-CCCccHHHHHHHHHHhcCCC-eEEE
Confidence 888899999999998642 467889999999988887753 22234333333444432111 1111
Q ss_pred e--eCCcc---ccccccccccCCCCeEEEEeCCC--cchHHHHHHHHHHHhccCCCCeE-EeCChhHHHHh---------
Q 011654 153 L--SNPEF---LAEGTAIQDLFNPDRVLIGGRET--PEGQKAIQALKDVYAHWVPEDRI-ITTNLWSAELS--------- 215 (480)
Q Consensus 153 ~--~~Pe~---~~~G~a~~~~~~~~~vviG~~~~--~~~~~~~~~~~~l~~~~~~~~~v-~~~~~~~ae~~--------- 215 (480)
. ..|.. .+||.++.......++.+|.... ...++..+.++++|.. ..+ +..|+...++.
T Consensus 140 ~~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~di~~~~l~~N~~~~~~~ 215 (404)
T 3c7a_A 140 SFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQMLHGAE----PVFRLAKHFLEMLIMSYSFVHPAI 215 (404)
T ss_dssp EESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHHHCSS----SEEEECSCHHHHHHTTCTTHHHHH
T ss_pred EecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHHhCCC----CceeEcCCEeeeeecCCceeccHH
Confidence 1 23322 33674444444444666675422 2234555556666542 102 22333322221
Q ss_pred ------h-----------hHHh---HHHHHHHHHHHHHHHHHHHh-----CCCH
Q 011654 216 ------K-----------LAAN---AFLAQRISSVNAMSALCEAT-----GADV 244 (480)
Q Consensus 216 ------K-----------l~~N---~~~~~~ia~~nE~~~l~~~~-----Gid~ 244 (480)
+ +..| ..+.+..+++.|+..+++++ |+++
T Consensus 216 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~ 269 (404)
T 3c7a_A 216 LFGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDL 269 (404)
T ss_dssp HHHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC
T ss_pred HHHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Confidence 1 3343 56677889999999999999 9876
No 80
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.44 E-value=7.1e-13 Score=123.95 Aligned_cols=155 Identities=17% Similarity=0.133 Sum_probs=106.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.++|..|+++ |++|++||++++ +++++|
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~-------------------------------------~~~~aD 59 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ-------------------------------------ATTLGE 59 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC-------------------------------------CSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH-------------------------------------HhccCC
Confidence 48999999999999999999998 999999998632 256899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC-Cc-cc-------h----HHHHHHHHHhcCCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST-VP-VK-------T----AEAIEKILTHNSRE 147 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~-~g-------t----~~~l~~~l~~~~~g 147 (480)
+||+|||+ ..+.++++++.+.++ +++|++.|+ ++ ++ + .+.+++.+..
T Consensus 60 ~vi~av~~---------------~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~---- 119 (209)
T 2raf_A 60 IVIMAVPY---------------PALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD---- 119 (209)
T ss_dssp EEEECSCH---------------HHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT----
T ss_pred EEEEcCCc---------------HHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC----
Confidence 99999983 235677888888787 888887766 33 22 3 3444443321
Q ss_pred Cce----eEeeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHH
Q 011654 148 IKY----QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAF 222 (480)
Q Consensus 148 ~~~----~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~ 222 (480)
..+ ...++|.+..+... . ..+..+++++. +++..+.++++|+.++. ..+...+++.+.+.|.+.|.+
T Consensus 120 ~~vv~~~~~~~~p~~~~~~~~--g-~~~~~~~~~g~----~~~~~~~v~~ll~~~G~-~~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 120 SQVLKAFNTTFAATLQSGQVN--G-KEPTTVLVAGN----DDSAKQRFTRALADSPL-EVKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp SEEEECSTTSCHHHHHHSEET--T-TEECEEEEEES----CHHHHHHHHHHTTTSSC-EEEEEESGGGHHHHHHHHHHH
T ss_pred CcEEEeeecccHhhccccccC--C-CCCceeEEcCC----CHHHHHHHHHHHHHcCC-ceEeCCCHhHHHHhcchHHHH
Confidence 111 11225555443221 1 01224556765 47889999999999852 356677899999999887754
No 81
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.36 E-value=1.1e-12 Score=123.54 Aligned_cols=166 Identities=14% Similarity=0.161 Sum_probs=104.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAV-VDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+|.||.++|..|+++ |++|++ +|+++++++.+.+.. +....+++ .++++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~-----------------g~~~~~~~-~~~~~~a 82 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRF-----------------GASVKAVE-LKDALQA 82 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHH-----------------TTTEEECC-HHHHTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHh-----------------CCCcccCh-HHHHhcC
Confidence 57999999999999999999998 999999 999999888776420 11112334 4458999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCc------cc------hHHHHHHHHHhcCCC
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVP------VK------TAEAIEKILTHNSRE 147 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~------~g------t~~~l~~~l~~~~~g 147 (480)
|+||+|||.. .+.++++++.+ + ++++|+..++.- +. +.+.+++.+...
T Consensus 83 DvVilavp~~---------------~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 142 (220)
T 4huj_A 83 DVVILAVPYD---------------SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGA--- 142 (220)
T ss_dssp SEEEEESCGG---------------GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTC---
T ss_pred CEEEEeCChH---------------HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCC---
Confidence 9999999732 24666777666 4 477777655321 11 455666655421
Q ss_pred CceeEee--CCcc-ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHH
Q 011654 148 IKYQILS--NPEF-LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAEL 214 (480)
Q Consensus 148 ~~~~v~~--~Pe~-~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~ 214 (480)
.+.-++ .|.. ...|..... .+..+++++. +++..+.++++|+.++. .++..++.+.|.+
T Consensus 143 -~vv~~~~~~~~~v~~~g~~~~~--~~~~v~~~g~----~~~~~~~v~~l~~~~G~-~~~~~G~l~~a~~ 204 (220)
T 4huj_A 143 -KVVKAFNTLPAAVLAADPDKGT--GSRVLFLSGN----HSDANRQVAELISSLGF-APVDLGTLAASGP 204 (220)
T ss_dssp -EEEEESCSSCHHHHTSCSBCSS--CEEEEEEEES----CHHHHHHHHHHHHHTTC-EEEECCSHHHHHH
T ss_pred -CEEECCCCCCHHHhhhCcccCC--CCeeEEEeCC----CHHHHHHHHHHHHHhCC-CeEeeCChhhcch
Confidence 111111 1111 111111111 1224556665 48899999999999852 3455677666644
No 82
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.33 E-value=6.6e-12 Score=123.53 Aligned_cols=192 Identities=11% Similarity=0.097 Sum_probs=121.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-ccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-AEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-~~aD 80 (480)
|||+|||+|.||+.+|..|+++ |++|++|+++++.++..... +. .....+.+..+++ ..+|
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~-------g~---------~~~~~~~~~~~~~~~~~D 64 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTVP-------HA---------PAQDIVVKGYEDVTNTFD 64 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESST-------TS---------CCEEEEEEEGGGCCSCEE
T ss_pred cEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEecC-------Ce---------eccceecCchHhcCCCCC
Confidence 7999999999999999999998 89999999986543211110 10 0122333444444 7899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEee-CCccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILS-NPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~-~Pe~~ 159 (480)
+||+|||.. .+.++++.+.++++++++|+... ...+..+. +..... -..+.+ +-.+.
T Consensus 65 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~~-nGi~~~~~----~~~~~v--~~g~~~~~a~~~ 122 (294)
T 3g17_A 65 VIIIAVKTH---------------QLDAVIPHLTYLAHEDTLIILAQ-NGYGQLEH----IPFKNV--CQAVVYISGQKK 122 (294)
T ss_dssp EEEECSCGG---------------GHHHHGGGHHHHEEEEEEEEECC-SSCCCGGG----CCCSCE--EECEEEEEEEEE
T ss_pred EEEEeCCcc---------------CHHHHHHHHHHhhCCCCEEEEec-cCcccHhh----CCCCcE--EEEEEEEEEEEc
Confidence 999999852 24678888988888777766432 22222111 211100 000111 11233
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhH------------------
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANA------------------ 221 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------ 221 (480)
+||.... .+..+.++ . .+..+.+.++|+.-. ....+..|+...+|.|++-|+
T Consensus 123 ~pg~v~~---~~~~~~~~-~-----~~~~~~l~~~l~~~~-~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~ 192 (294)
T 3g17_A 123 GDVVTHF---RDYQLRIQ-D-----NALTRQFRDLVQDSQ-IDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHN 192 (294)
T ss_dssp TTEEEEE---EEEEEEEE-C-----SHHHHHHHHHTTTSS-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGS
T ss_pred CCCEEEE---CCCEEecC-c-----cHHHHHHHHHHHhCC-CceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcC
Confidence 4454421 13355554 2 356778889998753 123455799999999999887
Q ss_pred --HHHHHHHHHHHHHHHHHHhCCC
Q 011654 222 --FLAQRISSVNAMSALCEATGAD 243 (480)
Q Consensus 222 --~~~~~ia~~nE~~~l~~~~Gid 243 (480)
.+.+....++|+..++++.|++
T Consensus 193 ~~~~~l~~~~~~E~~~va~a~G~~ 216 (294)
T 3g17_A 193 PEIRILCRQLLLDGCRVAQAEGLN 216 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2444566899999999999975
No 83
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.33 E-value=1.4e-11 Score=134.97 Aligned_cols=204 Identities=16% Similarity=0.154 Sum_probs=137.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-------hcCCCEEEecCHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-------CRGRNLFFSTDIE 73 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-------~~~~~l~~t~d~~ 73 (480)
|.||+|||+|.||..+|..++.+ |++|+++|++++.++...+... ..++..... ....+++.+++.+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIIT----FTLEKEASRAHQNGQASAKPKLRFSSSTK 389 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHH----HHHHHHHHHHHTTTCCCCCCCEEEESCGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHH----HHHHHHHHhccccchhhhhhhhcccCcHH
Confidence 46999999999999999999998 9999999999987765443100 001111110 1234678899987
Q ss_pred HHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEE-EecCCccchHHHHHHHHHhcCCCCceeE
Q 011654 74 KHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVV-EKSTVPVKTAEAIEKILTHNSREIKYQI 152 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~g~~~~v 152 (480)
+ +++||+||.||+.. .++ -+++++++.+++++++|+. ++||+++.. |+. ....-..|..
T Consensus 390 ~-l~~aDlVIEAV~E~-----------l~i--K~~vf~~le~~~~~~aIlASNTSsl~i~~---ia~---~~~~p~r~ig 449 (742)
T 3zwc_A 390 E-LSTVDLVVEAVFED-----------MNL--KKKVFAELSALCKPGAFLCTNTSALNVDD---IAS---STDRPQLVIG 449 (742)
T ss_dssp G-GGSCSEEEECCCSC-----------HHH--HHHHHHHHHHHSCTTCEEEECCSSSCHHH---HHT---TSSCGGGEEE
T ss_pred H-HhhCCEEEEecccc-----------HHH--HHHHHHHHhhcCCCCceEEecCCcCChHH---HHh---hcCCcccccc
Confidence 6 89999999999853 333 4889999999999999884 445666542 221 1110011111
Q ss_pred --eeCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhHHHHHHHHHH
Q 011654 153 --LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 153 --~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
.++|....+- . .|| .+..| ++++++.+..+.+.+.+ .+|.+.| ...++.| .+...++
T Consensus 450 ~HFfnP~~~m~L------V---Evi-~g~~T--s~e~~~~~~~~~~~lgK-~pV~vkd-----~pGFi~N---Ri~~~~~ 508 (742)
T 3zwc_A 450 THFFSPAHVMRL------L---EVI-PSRYS--SPTTIATVMSLSKKIGK-IGVVVGN-----CYGFVGN---RMLAPYY 508 (742)
T ss_dssp EECCSSTTTCCE------E---EEE-ECSSC--CHHHHHHHHHHHHHTTC-EEEECCC-----STTTTHH---HHHHHHH
T ss_pred ccccCCCCCCce------E---EEe-cCCCC--CHHHHHHHHHHHHHhCC-CCcccCC-----CCCccHH---HHhhHHH
Confidence 1244433221 1 244 44433 78999999999999874 4566654 3357778 4568899
Q ss_pred HHHHHHHHHhCCCHHHHHHHhc
Q 011654 231 NAMSALCEATGADVTQVSHAIG 252 (480)
Q Consensus 231 nE~~~l~~~~Gid~~~v~~~~~ 252 (480)
+|...+.+. |+++.++.+++.
T Consensus 509 ~ea~~l~~e-G~~~~~id~a~~ 529 (742)
T 3zwc_A 509 NQGFFLLEE-GSKPEDVDGVLE 529 (742)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHH
Confidence 999998876 799999998874
No 84
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.29 E-value=1.4e-11 Score=123.68 Aligned_cols=194 Identities=18% Similarity=0.151 Sum_probs=118.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH-HHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSR-IAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~-v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||.++|..|++. |++|+++|+++++ .+...+. ++..+ ++++++++||
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~-------------------G~~~~-~~~e~~~~aD 74 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH-------------------GLKVA-DVKTAVAAAD 74 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT-------------------TCEEE-CHHHHHHTCS
T ss_pred CEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC-------------------CCEEc-cHHHHHhcCC
Confidence 7899999999999999999998 8999999998765 3433321 24455 7878889999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHH-HHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC-C-CCceeEeeCCc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR-MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS-R-EIKYQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~-~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~-~-g~~~~v~~~Pe 157 (480)
+||+|||.. ...++++ ++.+.++++++|++.+++.. . +++.. . +.++ +..+|
T Consensus 75 vVilavp~~---------------~~~~v~~~~i~~~l~~~~ivi~~~gv~~----~----~~~~~~~~~~~v-v~~~P- 129 (338)
T 1np3_A 75 VVMILTPDE---------------FQGRLYKEEIEPNLKKGATLAFAHGFSI----H----YNQVVPRADLDV-IMIAP- 129 (338)
T ss_dssp EEEECSCHH---------------HHHHHHHHHTGGGCCTTCEEEESCCHHH----H----TTSSCCCTTCEE-EEEEE-
T ss_pred EEEEeCCcH---------------HHHHHHHHHHHhhCCCCCEEEEcCCchh----H----HHhhcCCCCcEE-EeccC-
Confidence 999999842 2366777 88889999998886543221 1 11111 1 2233 33456
Q ss_pred cccccccccccC----CCCeEEEEeCCCcchHHHHHHHHHHHhccCCCC-e--EEeCChh-HHHHhhhHHhH-HHHHHHH
Q 011654 158 FLAEGTAIQDLF----NPDRVLIGGRETPEGQKAIQALKDVYAHWVPED-R--IITTNLW-SAELSKLAANA-FLAQRIS 228 (480)
Q Consensus 158 ~~~~G~a~~~~~----~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~-~--v~~~~~~-~ae~~Kl~~N~-~~~~~ia 228 (480)
.+|+.+...++ ..+.++.-.. ..+++..+.+.++++.++ . + ++.+++. ..++..+.+++ +.....+
T Consensus 130 -~gp~~a~~~l~~~G~g~~~ii~~~~--~~~~~a~~~~~~l~~~lG--~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~ 204 (338)
T 1np3_A 130 -KAPGHTVRSEFVKGGGIPDLIAIYQ--DASGNAKNVALSYACGVG--GGRTGIIETTFKDETETDLFGEQAVLCGGCVE 204 (338)
T ss_dssp -SSCSHHHHHHHHTTCCCCEEEEEEE--CSSSCHHHHHHHHHHHTT--HHHHCEEECCHHHHHHHHHHHHHHTTTHHHHH
T ss_pred -CCCchhHHHHHhccCCCeEEEEecC--CCCHHHHHHHHHHHHHcC--CCccceEeechhcccchHHHHHHHHHhhhHHH
Confidence 34554433322 2233322111 113567888999999884 3 3 6666653 45556665551 1111223
Q ss_pred HHHHHHHHHHHhCCCHHHH
Q 011654 229 SVNAMSALCEATGADVTQV 247 (480)
Q Consensus 229 ~~nE~~~l~~~~Gid~~~v 247 (480)
++........+.|+++++.
T Consensus 205 ~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 205 LVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHH
Confidence 3333333334678877643
No 85
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.27 E-value=3.5e-11 Score=112.83 Aligned_cols=171 Identities=16% Similarity=0.066 Sum_probs=104.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||..+|..|++. |++|+++|+++++.+.+.+. +++.+ +..++++++|
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-------------------g~~~~-~~~~~~~~~D 85 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPS-------------------AAQVT-FQEEAVSSPE 85 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBT-------------------TSEEE-EHHHHTTSCS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCcee-cHHHHHhCCC
Confidence 47899999999999999999998 89999999999988877642 23334 6777789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCcc-chHH---HHHHHHHhcCCCCceeEeeCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPV-KTAE---AIEKILTHNSREIKYQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~-gt~~---~l~~~l~~~~~g~~~~v~~~P 156 (480)
+||+|+|.. .. .++++ +.+.+ ++++|++.|+..+ .+.+ ...+.+++...+..+.-..++
T Consensus 86 vVi~av~~~-~~--------------~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~ 148 (215)
T 2vns_A 86 VIFVAVFRE-HY--------------SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNV 148 (215)
T ss_dssp EEEECSCGG-GS--------------GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTT
T ss_pred EEEECCChH-HH--------------HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEecccc
Confidence 999999842 11 12222 44445 6788887766432 2211 112233332211111111222
Q ss_pred ccc---cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHH
Q 011654 157 EFL---AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAA 219 (480)
Q Consensus 157 e~~---~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~ 219 (480)
... .++.. . .....++.|+ +++..+.++++|+.++. ..++.++.+.|...+.+.
T Consensus 149 ~~~~~~~~~~~-~--g~~~~~~~g~-----~~~~~~~v~~ll~~~G~-~~~~~g~~~~~~~~e~~~ 205 (215)
T 2vns_A 149 ISAWTLQAGPR-D--GNRQVPICGD-----QPEAKRAVSEMALAMGF-MPVDMGSLASAWEVEAMP 205 (215)
T ss_dssp BCHHHHHTCSC-S--SCCEEEEEES-----CHHHHHHHHHHHHHTTC-EEEECCSGGGHHHHHHSC
T ss_pred ccHhHhccccc-C--CceeEEEecC-----CHHHHHHHHHHHHHcCC-ceEeecchhhhhHhhhhh
Confidence 111 11211 1 1111344443 37889999999999863 345567788887776443
No 86
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.22 E-value=6.3e-11 Score=118.45 Aligned_cols=134 Identities=14% Similarity=0.170 Sum_probs=95.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..|+.. |++|++||+++++.+...+. ++..+ ++++++++||+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~-~l~e~l~~aDv 213 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAEF-------------------QAEFV-STPELAAQSDF 213 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHTT-------------------TCEEC-CHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHhc-------------------CceeC-CHHHHHhhCCE
Confidence 6899999999999999999987 99999999987655544321 23444 78888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCC---CCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSR---EIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|.+....+ ..+ +++.+.++++.++|+.|+.++...+.+.+.+++... +.|+ +.||.
T Consensus 214 Vi~~vp~~~~t~~-----~i~--------~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~ep 277 (330)
T 2gcg_A 214 IVVACSLTPATEG-----LCN--------KDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDV---TSPEP 277 (330)
T ss_dssp EEECCCCCTTTTT-----CBS--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEEeCCCChHHHH-----hhC--------HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCC---CCCCC
Confidence 9999986532210 111 345567889999999999988888888888876421 2232 56776
Q ss_pred ccccccccccCCCCeEEE
Q 011654 159 LAEGTAIQDLFNPDRVLI 176 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vvi 176 (480)
..+++. ++..+.+++
T Consensus 278 l~~~~~---l~~~~nvi~ 292 (330)
T 2gcg_A 278 LPTNHP---LLTLKNCVI 292 (330)
T ss_dssp CCTTCG---GGGCTTEEE
T ss_pred CCCCCh---hhcCCCEEE
Confidence 555544 344445665
No 87
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.20 E-value=1.6e-11 Score=119.71 Aligned_cols=183 Identities=13% Similarity=0.117 Sum_probs=106.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+|.||.++|..|+++ ++| .+||+++++.+.+.+.. +. .+++++++++++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~-----------------g~--~~~~~~~~~~~~ 59 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVY-----------------GG--KAATLEKHPELN 59 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHT-----------------CC--CCCSSCCCCC--
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHc-----------------CC--ccCCHHHHHhcC
Confidence 47999999999999999999864 788 59999999888776410 11 345666667889
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||... +.++++++. +++++|++.|+..+... +++. +....+|...
T Consensus 60 DvVilav~~~~---------------~~~v~~~l~---~~~~ivi~~s~~~~~~~------l~~~-----~~~~~~p~~~ 110 (276)
T 2i76_A 60 GVVFVIVPDRY---------------IKTVANHLN---LGDAVLVHCSGFLSSEI------FKKS-----GRASIHPNFS 110 (276)
T ss_dssp -CEEECSCTTT---------------HHHHHTTTC---CSSCCEEECCSSSCGGG------GCSS-----SEEEEEECSC
T ss_pred CEEEEeCChHH---------------HHHHHHHhc---cCCCEEEECCCCCcHHH------HHHh-----hccccchhhh
Confidence 99999998532 245555443 57888887775433321 1111 1222333332
Q ss_pred cccc--cccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChh---HHHHhhhHHhHHHHHHHHHHHHHH
Q 011654 160 AEGT--AIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLW---SAELSKLAANAFLAQRISSVNAMS 234 (480)
Q Consensus 160 ~~G~--a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~---~ae~~Kl~~N~~~~~~ia~~nE~~ 234 (480)
.+|. ....+...+ +++++. ++..+.++++++.++. ..+.+.... .-...+++.|... .+++|+.
T Consensus 111 ~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~l~~~lG~-~~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~ 179 (276)
T 2i76_A 111 FSSLEKALEMKDQIV-FGLEGD-----ERGLPIVKKIAEEISG-KYFVIPSEKKKAYHLAAVIASNFPV----ALAYLSK 179 (276)
T ss_dssp C--CTTGGGCGGGCC-EEECCC-----TTTHHHHHHHHHHHCS-CEEECCGGGHHHHHHHHHHHHTTHH----HHHHHHH
T ss_pred cCCCchhHHHhCCCe-EEEEeC-----hHHHHHHHHHHHHhCC-CEEEECHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 2221 111122222 344543 4458889999999852 344444222 1234477777432 4567777
Q ss_pred HHHHHhCCCHH
Q 011654 235 ALCEATGADVT 245 (480)
Q Consensus 235 ~l~~~~Gid~~ 245 (480)
.++++.|++.+
T Consensus 180 ~~~~~~Gl~~~ 190 (276)
T 2i76_A 180 RIYTLLGLDEP 190 (276)
T ss_dssp HHHHTTTCSCH
T ss_pred HHHHHcCCChH
Confidence 89999999877
No 88
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.18 E-value=6.2e-11 Score=117.32 Aligned_cols=200 Identities=14% Similarity=0.090 Sum_probs=115.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||+.+|..|+ + |++|++|++++++++.+++....+..++.. . ...+..+ .++...+|+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~-~-----~~~~~~~---~~~~~~~D~ 70 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEE-F-----RADCSAD---TSINSDFDL 70 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEE-E-----EECCEEE---SSCCSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCe-e-----ccccccc---ccccCCCCE
Confidence 89999999999999999999 7 999999999999988887532222111110 0 0011111 123578999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCce--eEee-CCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKY--QILS-NPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~--~v~~-~Pe~ 158 (480)
||+|||.. + +.++++.+.+. .+++ |+. -....+..+.+.+.+.. ..+ .+++ +-.+
T Consensus 71 vilavK~~------------~---~~~~l~~l~~~-~~~~-ivs-~~nGi~~~e~l~~~~~~----~~vl~g~~~~~a~~ 128 (307)
T 3ego_A 71 LVVTVKQH------------Q---LQSVFSSLERI-GKTN-ILF-LQNGMGHIHDLKDWHVG----HSIYVGIVEHGAVR 128 (307)
T ss_dssp EEECCCGG------------G---HHHHHHHTTSS-CCCE-EEE-CCSSSHHHHHHHTCCCS----CEEEEEEECCEEEE
T ss_pred EEEEeCHH------------H---HHHHHHHhhcC-CCCe-EEE-ecCCccHHHHHHHhCCC----CcEEEEEEeeceEE
Confidence 99999842 2 46777777664 4455 432 23333433333322211 111 1222 2234
Q ss_pred ccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhHHhH-----------------
Q 011654 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLAANA----------------- 221 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~----------------- 221 (480)
..||...+.- ..++.+|..+.. .+..+.+.++|..-. -...+..|+....|.|++-|+
T Consensus 129 ~~pg~v~~~~--~g~~~iG~~~~~--~~~~~~l~~~l~~ag-~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~ 203 (307)
T 3ego_A 129 KSDTAVDHTG--LGAIKWSAFDDA--EPDRLNILFQHNHSD-FPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELL 203 (307)
T ss_dssp CSSSEEEEEE--CCCEEEEECTTC--CGGGGTTTTSSCCTT-SCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHH
T ss_pred CCCCEEEEee--eeeEEEEeCCCC--cHHHHHHHHHhhhCC-CCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhh
Confidence 4566654332 235677875322 122333333443321 123445699999999999996
Q ss_pred ----HHHHHHHHHHHHHHHHHHh
Q 011654 222 ----FLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 222 ----~~~~~ia~~nE~~~l~~~~ 240 (480)
.+.+....+.|+..+++..
T Consensus 204 ~~~~~~~l~~~l~~E~~~va~~~ 226 (307)
T 3ego_A 204 TTPAYLAFMKLVFQEACRILKLE 226 (307)
T ss_dssp HSHHHHHHHHHHHHHHHHHHTCS
T ss_pred cChhHHHHHHHHHHHHHHHHhcc
Confidence 2344556777777777643
No 89
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.16 E-value=7.7e-10 Score=104.30 Aligned_cols=154 Identities=8% Similarity=0.013 Sum_probs=101.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.|||+|||+|.||.+||..|.++ ||+|++||+. ++ +.+||
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~--G~~V~~~~~~-------------------------------------~~-~~~aD 45 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV--GHYVTVLHAP-------------------------------------ED-IRDFE 45 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT--TCEEEECSSG-------------------------------------GG-GGGCS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC--CCEEEEecCH-------------------------------------HH-hccCC
Confidence 38999999999999999999998 9999999972 11 46788
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC-ccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV-PVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+|||.. .+.++++++.++++++++|+++|+. +....+.+ .+.+ . .++..+|-+.
T Consensus 46 --ilavP~~---------------ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~----~~~g--~-~fvg~HPm~g 101 (232)
T 3dfu_A 46 --LVVIDAH---------------GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPL----ETSG--G-IVMSAHPIGQ 101 (232)
T ss_dssp --EEEECSS---------------CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHH----HHTT--C-EEEEEEEEET
T ss_pred --EEEEcHH---------------HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHH----HhCC--C-cEEEeeeCCC
Confidence 9999853 2577888999999999999987643 32222222 2222 1 3456678642
Q ss_pred cccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHH--HhhhHHhHHHHHHHHHHHHHHHHH
Q 011654 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAE--LSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae--~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
. +.++.++ +++..+.+++|++.++ .+++.++...-- ..-++. .-..++++++...+.
T Consensus 102 ~-----------~~~i~a~-----d~~a~~~l~~L~~~lG--~~vv~~~~~~hd~~~AAvsh---~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 102 D-----------RWVASAL-----DELGETIVGLLVGELG--GSIVEIADDKRAQLAAALTY---AGFLSTLQRDASYFL 160 (232)
T ss_dssp T-----------EEEEEES-----SHHHHHHHHHHHHHTT--CEECCCCGGGHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred C-----------ceeeeCC-----CHHHHHHHHHHHHHhC--CEEEEeCHHHHhHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 1 1334443 3778999999999985 466666543211 111122 223355666666665
Q ss_pred HH
Q 011654 238 EA 239 (480)
Q Consensus 238 ~~ 239 (480)
+.
T Consensus 161 ~~ 162 (232)
T 3dfu_A 161 DE 162 (232)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 90
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.16 E-value=8e-11 Score=117.84 Aligned_cols=131 Identities=18% Similarity=0.155 Sum_probs=93.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..|+.. |++|++||++++. +...+. ++.+ +++++++++||+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~~~l~~aDv 207 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVEREL-------------------NAEF-KPLEDLLRESDF 207 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHH-------------------CCEE-CCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhc-------------------Cccc-CCHHHHHhhCCE
Confidence 6899999999999999999987 9999999998766 333210 1333 478888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCC---CCceeEeeCCc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSR---EIKYQILSNPE 157 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe 157 (480)
|++|+|.+.... ..+ +++.+.++++.++|+.|+.++...+.+.+.|++... +.|+ +.||
T Consensus 208 Vil~vp~~~~t~--------------~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~E 270 (334)
T 2dbq_A 208 VVLAVPLTRETY--------------HLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDV---FEEE 270 (334)
T ss_dssp EEECCCCCTTTT--------------TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSS
T ss_pred EEECCCCChHHH--------------HhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecC---CCCC
Confidence 999998754221 111 345567899999999999888888888888876321 1232 5665
Q ss_pred cccccccccccCCCCeEEE
Q 011654 158 FLAEGTAIQDLFNPDRVLI 176 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vvi 176 (480)
. .+...++..+.+++
T Consensus 271 P----~~~~~L~~~~~vi~ 285 (334)
T 2dbq_A 271 P----YYNEELFKLDNVVL 285 (334)
T ss_dssp S----CCCHHHHHCTTEEE
T ss_pred C----CCCchhhcCCCEEE
Confidence 3 22334555556665
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.73 E-value=5.5e-12 Score=117.13 Aligned_cols=166 Identities=14% Similarity=0.139 Sum_probs=100.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|.+. |++|++||++++ .+.+.. .++..+ ++.++++.+|+
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~-------------------~g~~~~-~~~~~~~~aDv 76 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLP-------------------RGAEVL-CYSEAASRSDV 76 (201)
Confidence 7899999999999999999988 899999999876 433321 123333 56667889999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCcc------chHHHHHHHHHhcCCCCceeEeeC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPV------KTAEAIEKILTHNSREIKYQILSN 155 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~------gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
||+|||... +++++ ++.. +.++++||+.++..+ +..+.+.+.+..... .. .+...
T Consensus 77 Vilav~~~~---------------~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~v-vr-a~~n~ 137 (201)
T 2yjz_A 77 IVLAVHREH---------------YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHV-VK-AFNTI 137 (201)
Confidence 999998531 12333 3433 345788887776543 222334333322100 00 01111
Q ss_pred Cc-cccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhH
Q 011654 156 PE-FLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLA 218 (480)
Q Consensus 156 Pe-~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~ 218 (480)
|. ...+|... .....++.|++ ++..+.++++|+.++. ..++.++++.+.+.|.+
T Consensus 138 ~a~~~~~g~l~---g~~~~~~~g~~-----~~~~~~v~~ll~~~G~-~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 138 SAWALQSGTLD---ASRQVFVCGND-----SKAKDRVMDIARTLGL-TPLDQGSLVAAKEIENY 192 (201)
Confidence 11 12223210 01113455643 6788899999999863 45667788888888865
No 92
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=99.12 E-value=2.5e-10 Score=113.16 Aligned_cols=122 Identities=24% Similarity=0.229 Sum_probs=85.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+.+..|++|++||+++++++.+..... ..... .....++++++|+++ +++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~----~~~~~---~~~~~~i~~t~d~~~-l~~aDv 72 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY----ESGPV---GLFDTKVTGSNDYAD-TANSDI 72 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH----TTHHH---HTCCCEEEEESCGGG-GTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHH----hhhhc---ccCCcEEEECCCHHH-HCCCCE
Confidence 7999999999999999999985337999999999988876542100 00000 011345788889876 999999
Q ss_pred EEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 82 VFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+|+|+|...+ ....|+ +.++++.+.+.++.+ +.+|++ -|+|+++...+
T Consensus 73 Viiav~~p~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~viv-~tNP~~~~~~~ 127 (310)
T 1guz_A 73 VIITAGLPRKPG----MTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIV-VSNPLDIMTHV 127 (310)
T ss_dssp EEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHCS-SCEEEE-CCSSHHHHHHH
T ss_pred EEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEE-EcCchHHHHHH
Confidence 999999986431 113444 666788888888865 444444 37888875443
No 93
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.09 E-value=1.7e-10 Score=115.98 Aligned_cols=109 Identities=14% Similarity=0.080 Sum_probs=81.8
Q ss_pred cEEEEEcCChhHHHHHHHHH-HcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIA-LKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La-~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+. .. |++|++||++++..+...+ .++..++++++++++||
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aD 222 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKA-------------------LGAERVDSLEELARRSD 222 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHH-------------------HTCEECSSHHHHHHHCS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhh-------------------cCcEEeCCHHHHhccCC
Confidence 58999999999999999998 76 8999999998754443321 02345567888889999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|..... ..+. -+++.+.++++.++|+.|+.++...+.+.+.|++.
T Consensus 223 vVil~vp~~~~t-----------~~li--~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~ 273 (348)
T 2w2k_A 223 CVSVSVPYMKLT-----------HHLI--DEAFFAAMKPGSRIVNTARGPVISQDALIAALKSG 273 (348)
T ss_dssp EEEECCCCSGGG-----------TTCB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEEeCCCChHH-----------HHHh--hHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhC
Confidence 999999864321 1111 02345678999999999999888888888888763
No 94
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.08 E-value=1.2e-09 Score=109.20 Aligned_cols=121 Identities=18% Similarity=0.226 Sum_probs=86.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|+||.++|..|+.+ |+ +|++||+++++++..... +.+.... ....++++|+|+++++++|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~~ea~~~a 79 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALD--------LSHVTSVVDTNVSVRAEYSYEAALTGA 79 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHTTCCCCEEEECSHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHH--------HHhhhhccCCCCEEEEeCCHHHHhCCC
Confidence 6999999999999999999998 88 999999999887763211 1111111 1235688899998889999
Q ss_pred cEEEEeccCCCCcCCCCCC----CCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 80 DIVFVSVNTPTKTQGLGAG----KAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~----~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||+++++|.... .. ...| ...++++++.+.++. ++.++++ .|+|.++.-.+
T Consensus 80 DiVi~a~g~p~~~g---~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNP~~~~t~~ 141 (331)
T 1pzg_A 80 DCVIVTAGLTKVPG---KPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIV-VTNPLDCMVKV 141 (331)
T ss_dssp SEEEECCSCSSCTT---CCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSSHHHHHHH
T ss_pred CEEEEccCCCCCCC---cccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-EcCchHHHHHH
Confidence 99999997775431 00 1234 345788888898887 5565554 68888876443
No 95
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.01 E-value=2.1e-09 Score=106.87 Aligned_cols=123 Identities=20% Similarity=0.208 Sum_probs=84.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|+||.++|..|+.+ |+ +|+++|+++++++..... +...... ....++++++|+ +++++|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 73 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALD--------TSHTNVMAYSNCKVSGSNTY-DDLAGA 73 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTHHHHHTCCCCEEEECCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 7999999999999999999998 77 899999999887654321 1111111 123568888998 679999
Q ss_pred cEEEEeccCCCCcCCCC-CCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 80 DIVFVSVNTPTKTQGLG-AGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~-~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||+++++|...+..+ +....| ...++++++.+.++. ++.++++ -|+|.++...+
T Consensus 74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNP~~~~t~~ 135 (322)
T 1t2d_A 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIV-VTNPVDVMVQL 135 (322)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE-CSSSHHHHHHH
T ss_pred CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE-ecCChHHHHHH
Confidence 99999998776431100 000222 245778888888887 5666655 37787775433
No 96
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.00 E-value=6.7e-10 Score=108.58 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=81.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|... |++|++||++++..+ .....+++++++++||+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------~~~~~~~l~ell~~aDi 176 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQN------------------------VDVISESPADLFRQSDF 176 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTT------------------------CSEECSSHHHHHHHCSE
T ss_pred chheeeccCchhHHHHHHHHhh--CcEEEEEeccccccc------------------------cccccCChHHHhhccCe
Confidence 5899999999999999999988 999999999753211 12355688898999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ .. -++..+.++++.++|+.|+.++-..+.+.+.|++..
T Consensus 177 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~ 227 (290)
T 3gvx_A 177 VLIAIPLTDKTRG-----MV--------NSRLLANARKNLTIVNVARADVVSKPDMIGFLKERS 227 (290)
T ss_dssp EEECCCCCTTTTT-----CB--------SHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCT
T ss_pred EEEEeeccccchh-----hh--------hHHHHhhhhcCceEEEeehhcccCCcchhhhhhhcc
Confidence 9999984322110 11 145667889999999999988888888888887653
No 97
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.00 E-value=3.8e-09 Score=105.36 Aligned_cols=117 Identities=22% Similarity=0.304 Sum_probs=83.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +...... ....++++++|+ +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALD--------LNHCMALIGSPAKIFGENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHH--------HHhHhhccCCCCEEEECCCH-HHHCCC
Confidence 6899999999999999999998 88 999999999887753211 1111111 123568898998 679999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
|+||+++++|..... ...|+ ..++++++.+.++. ++.++++. |.|.++..
T Consensus 84 D~VI~avg~p~k~g~----tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~~~~t 138 (328)
T 2hjr_A 84 DVVIITAGVPRKPNM----TRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI-TNPLDAMV 138 (328)
T ss_dssp SEEEECCSCCCCTTC----CSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHH
T ss_pred CEEEEcCCCCCCCCC----chhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe-cCchHHHH
Confidence 999999987764311 12333 55778888888887 56666553 66766543
No 98
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.99 E-value=1.2e-09 Score=108.99 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=78.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..|... |++|++||++++..+ +....+++++++++||+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------g~~~~~~l~ell~~aDv 218 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT------------------------NYTYYGSVVELASNSDI 218 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC------------------------CSEEESCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc------------------------CceecCCHHHHHhcCCE
Confidence 5899999999999999999987 999999999764210 12345688888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +++.+.+++++++|+.|+..+-.++.+.+.|++.
T Consensus 219 Vil~vP~~~~t~~-----li~--------~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 219 LVVACPLTPETTH-----IIN--------REVIDALGPKGVLINIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp EEECSCCCGGGTT-----CBC--------HHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHHHH-----Hhh--------HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 9999986422100 111 2344567889999999998888888888888764
No 99
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.96 E-value=4.4e-09 Score=104.03 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=80.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEE-ecCHHHHhc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK--IEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFF-STDIEKHVA 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~-t~d~~~a~~ 77 (480)
||||+|||+|.||.++|..|+.+ | ++|++||+++++++.+... +..... ......+. ++++ ++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~--------l~~~~~-~~~~~~~~~~~d~-~~~~ 68 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQID--------FQDAMA-NLEAHGNIVINDW-AALA 68 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHHHGG-GSSSCCEEEESCG-GGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHH--------HHhhhh-hcCCCeEEEeCCH-HHhC
Confidence 78999999999999999999998 7 8999999999988776531 000000 00112333 5777 6689
Q ss_pred cCcEEEEeccCCCC----cCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 78 EADIVFVSVNTPTK----TQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 78 ~aDvVii~Vptp~~----~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+||+|+|.|.. ... ++ ..+...++++++.+.++.+ +.+|++ .|.|.++...
T Consensus 69 ~aDvViiav~~~~~~~~~~g~---~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~-~tNp~~~~~~ 130 (309)
T 1hyh_A 69 DADVVISTLGNIKLQQDNPTG---DRFAELKFTSSMVQSVGTNLKESGF-HGVLVV-ISNPVDVITA 130 (309)
T ss_dssp TCSEEEECCSCGGGTC----------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHHH
T ss_pred CCCEEEEecCCcccCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE-EcCcHHHHHH
Confidence 99999999997642 100 00 0123446778888888764 566655 6778776443
No 100
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.94 E-value=5.7e-09 Score=104.84 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=82.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||.++|..+... |++|++||+++..-..... +++..+++++++++||+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDi 218 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENSKERARAD--------------------GFAVAESKDALFEQSDV 218 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHHHHHHHHT--------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHhc--------------------CceEeCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999998643222222 24566788998999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ .. -++..+.++++.++|+.|+.++-..+.+.+.|++..
T Consensus 219 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 269 (352)
T 3gg9_A 219 LSVHLRLNDETRS-----II--------TVADLTRMKPTALFVNTSRAELVEENGMVTALNRGR 269 (352)
T ss_dssp EEECCCCSTTTTT-----CB--------CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTS
T ss_pred EEEeccCcHHHHH-----hh--------CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCC
Confidence 9999985322110 11 134567789999999999887777777888887653
No 101
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.94 E-value=4.4e-09 Score=105.08 Aligned_cols=132 Identities=11% Similarity=0.139 Sum_probs=89.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..|+.. |++|++||++++. +...+ .++..+ ++++++++||+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~-------------------~g~~~~-~l~e~l~~aDi 203 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKE-------------------LKARYM-DIDELLEKSDI 203 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHH-------------------HTEEEC-CHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhh-------------------cCceec-CHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765 32221 024443 78888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCC---CCceeEeeCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSR---EIKYQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|......+ ..+ +.+.+.++++ ++|+.|+..+...+.+.+.|++... +.|+ +.||.
T Consensus 204 Vil~vp~~~~t~~-----~i~--------~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv---~~~EP 266 (333)
T 2d0i_A 204 VILALPLTRDTYH-----IIN--------EERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDV---FEKEP 266 (333)
T ss_dssp EEECCCCCTTTTT-----SBC--------HHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESC---CSSSS
T ss_pred EEEcCCCChHHHH-----HhC--------HHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecC---CCCCC
Confidence 9999987522110 111 2344567889 9999998888777778777776421 2332 46554
Q ss_pred ccccccccccCCCC-eEEEE
Q 011654 159 LAEGTAIQDLFNPD-RVLIG 177 (480)
Q Consensus 159 ~~~G~a~~~~~~~~-~vviG 177 (480)
.. . ..++..+ .+++.
T Consensus 267 ~~-~---~~L~~~~~nvilt 282 (333)
T 2d0i_A 267 VR-E---HELFKYEWETVLT 282 (333)
T ss_dssp CS-C---CGGGGCTTTEEEC
T ss_pred CC-C---chHHcCCCCEEEc
Confidence 32 2 3455555 66654
No 102
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.94 E-value=6e-09 Score=103.07 Aligned_cols=119 Identities=22% Similarity=0.302 Sum_probs=80.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHH-hhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVT-QCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~-~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|+||.++|..|+.+ |+ +|+++|+++++++..... +.+... .....++++++|+ +++++|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~a 71 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALD--------LYEASPIEGFDVRVTGTNNY-ADTANS 71 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHh--------HHHhHhhcCCCeEEEECCCH-HHHCCC
Confidence 6999999999999999999988 76 899999998877643211 111100 1123468888898 669999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||+++++|..... ...|+ ..++++++.+.++. ++.+|++ .|+|.++...+
T Consensus 72 D~Vi~a~g~p~~~g~----~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNPv~~~t~~ 128 (309)
T 1ur5_A 72 DVIVVTSGAPRKPGM----SREDLIKVNADITRACISQAAPLS-PNAVIIM-VNNPLDAMTYL 128 (309)
T ss_dssp SEEEECCCC------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE-CCSSHHHHHHH
T ss_pred CEEEEcCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-cCCchHHHHHH
Confidence 999999998865311 12232 55567777788876 5666655 58888876443
No 103
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.93 E-value=4.2e-09 Score=104.61 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=79.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeC-CHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDI-SVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~-~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+... |++|++||+ +++....... +....++++++++.||
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~l~ell~~aD 204 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASY--------------------QATFHDSLDSLLSVSQ 204 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHH--------------------TCEECSSHHHHHHHCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChhhhhhc--------------------CcEEcCCHHHHHhhCC
Confidence 5899999999999999999876 899999999 7655221111 1344557888889999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|..... +..+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 205 vVil~~p~~~~t--------------~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g 255 (320)
T 1gdh_A 205 FFSLNAPSTPET--------------RYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAG 255 (320)
T ss_dssp EEEECCCCCTTT--------------TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEEeccCchHH--------------HhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 999999854211 1111 3455778999999999887666667787778764
No 104
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.91 E-value=2.4e-09 Score=107.48 Aligned_cols=109 Identities=13% Similarity=0.188 Sum_probs=81.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..|... |++|++||+++...+...+ .+....+++++.++.||+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~-------------------~g~~~~~~l~ell~~aDv 223 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKE-------------------TGAKFVEDLNEMLPKCDV 223 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHH-------------------HCCEECSCHHHHGGGCSE
T ss_pred CEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHh-------------------CCCeEcCCHHHHHhcCCE
Confidence 6899999999999999999887 9999999997543333221 023455788999999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ ++..+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 224 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 273 (351)
T 3jtm_A 224 IVINMPLTEKTRG-----MFN--------KELIGKLKKGVLIVNNARGAIMERQAVVDAVESG 273 (351)
T ss_dssp EEECSCCCTTTTT-----CBS--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEECCCCCHHHHH-----hhc--------HHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhC
Confidence 9999985322110 111 3455668999999999988877778888888764
No 105
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.91 E-value=3.8e-09 Score=104.62 Aligned_cols=107 Identities=18% Similarity=0.176 Sum_probs=79.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..+... |++|++||++++....... +... .++++.++.||+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~-~~l~ell~~aDv 199 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIREKAEKI--------------------NAKA-VSLEELLKNSDV 199 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHT--------------------TCEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchhHHHhc--------------------Ccee-cCHHHHHhhCCE
Confidence 6899999999999999999987 9999999998765432111 1233 378888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 200 Vvl~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 249 (313)
T 2ekl_A 200 ISLHVTVSKDAKP-----IID--------YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKG 249 (313)
T ss_dssp EEECCCCCTTSCC-----SBC--------HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCChHHHH-----hhC--------HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999986432110 111 2345668899999999987777777788888764
No 106
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.89 E-value=1.1e-08 Score=102.43 Aligned_cols=107 Identities=11% Similarity=0.135 Sum_probs=80.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++...+... +.+..+++++.+++||+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~---------------------g~~~~~~l~ell~~sDv 230 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALEE---------------------GAIYHDTLDSLLGASDI 230 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHT---------------------TCEECSSHHHHHHTCSE
T ss_pred CEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhhc---------------------CCeEeCCHHHHHhhCCE
Confidence 5899999999999999999876 999999999753222111 23455688998999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ ++..+.++++.++|+.|..++-..+.|.+.|++.
T Consensus 231 V~l~~Plt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 280 (345)
T 4g2n_A 231 FLIAAPGRPELKG-----FLD--------HDRIAKIPEGAVVINISRGDLINDDALIEALRSK 280 (345)
T ss_dssp EEECSCCCGGGTT-----CBC--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCCHHHHH-----HhC--------HHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 9999985322110 111 3455678999999999988777777788888764
No 107
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.89 E-value=1.3e-08 Score=100.41 Aligned_cols=107 Identities=21% Similarity=0.218 Sum_probs=78.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..+... |++|++||++++. +...+. +... .+++++++.||+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~ell~~aDv 199 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEV-------------------NGKF-VDLETLLKESDV 199 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHT-------------------TCEE-CCHHHHHHHCSE
T ss_pred ceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhc-------------------Cccc-cCHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765 222211 1233 367888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 200 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 200 VTIHVPLVESTYH-----LIN--------EERLKLMKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp EEECCCCSTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHHhh-----hcC--------HHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985432100 111 2345668999999999987776677788878764
No 108
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.87 E-value=1.8e-08 Score=100.13 Aligned_cols=117 Identities=24% Similarity=0.334 Sum_probs=79.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.+... +..........++.. ++. +++++|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~i~~-~d~-~~~~~a 68 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALD--------LIHGTPFTRRANIYA-GDY-ADLKGS 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHHHGGGSCCCEEEE-CCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHH--------HHhhhhhcCCcEEEe-CCH-HHhCCC
Confidence 7999999999999999999998 88 999999999888765421 000000001123554 464 458999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||+|+|++.... ....| ...++++++.+.++. ++.++++ .|.|.++...
T Consensus 69 DvViiav~~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~-~tNp~~~~~~ 124 (319)
T 1a5z_A 69 DVVIVAAGVPQKPG----ETRLQLLGRNARVMKEIARNVSKYA-PDSIVIV-VTNPVDVLTY 124 (319)
T ss_dssp SEEEECCCCCCCSS----CCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHHH
T ss_pred CEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-eCCcHHHHHH
Confidence 99999999875321 00222 234677888888886 4555554 4778776543
No 109
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.86 E-value=7.9e-09 Score=103.17 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=65.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++. . .......++++++++||+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~------~------------------~~~~~~~sl~ell~~aDv 225 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF--GMSVRYWNRSTLS------G------------------VDWIAHQSPVDLARDSDV 225 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCT------T------------------SCCEECSSHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCccc------c------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999877 9999999997542 0 113445788999999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|.... + +..+ ++..+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 226 Vil~vP~t~~-----------t---~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 226 LAVCVAASAA-----------T---QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp EEECC------------------------CHHHHHHTTTTCEEEECSCC--------------C
T ss_pred EEEeCCCCHH-----------H---HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999984321 1 2222 4566778999999999887776666677777653
No 110
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.85 E-value=4.5e-09 Score=104.34 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=79.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++..+.+ .......++++.+++||+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 194 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHF---------------------HETVAFTATADALATANF 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTC---------------------SEEEEGGGCHHHHHHCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhH---------------------hhccccCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975422110 012233567888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ .. -++....++++.++|+.|+.++-..+.|.+.|++.
T Consensus 195 V~l~lPlt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 244 (324)
T 3evt_A 195 IVNALPLTPTTHH-----LF--------STELFQQTKQQPMLINIGRGPAVDTTALMTALDHH 244 (324)
T ss_dssp EEECCCCCGGGTT-----CB--------SHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCCCchHHHH-----hc--------CHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhC
Confidence 9999985322110 11 13456678999999999998888888888888764
No 111
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.83 E-value=1.7e-08 Score=106.96 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=79.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|... |++|++||++++. +...+ .++..+ +++++++.||+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~-------------------~g~~~~-~l~e~~~~aDv 199 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSP-ARAAQ-------------------LGIELL-SLDDLLARADF 199 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCH-HHHHH-------------------HTCEEC-CHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEECCCCCh-hHHHh-------------------cCcEEc-CHHHHHhcCCE
Confidence 6899999999999999999987 9999999997643 21111 013333 78888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHH-HHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAAR-MIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~-~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ...+. .+.+.+++++++++.++..+-..+.+.+.+++.
T Consensus 200 V~l~~P~~~~t--------------~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g 249 (529)
T 1ygy_A 200 ISVHLPKTPET--------------AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGG 249 (529)
T ss_dssp EEECCCCSTTT--------------TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTS
T ss_pred EEECCCCchHH--------------HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcC
Confidence 99999864211 11222 356778999999999988887777788878763
No 112
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.83 E-value=3.1e-08 Score=98.20 Aligned_cols=117 Identities=25% Similarity=0.304 Sum_probs=80.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHH--HH--HCCCCCCCCCChHHHHHhhcCCCEEEecCHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIA--AW--NGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEK 74 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~--~l--~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~ 74 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++ .+ ..+ .++.. ..+++.+++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~-----------~~~v~~~~~~~- 71 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHG-SSFYP-----------TVSIDGSDDPE- 71 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHT-GGGST-----------TCEEEEESCGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhh-hhhcC-----------CeEEEeCCCHH-
Confidence 48999999999999999999998 88 9999999998776 22 222 11110 12455666764
Q ss_pred HhccCcEEEEeccCCCCcCCCCCCCC-----CChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHH
Q 011654 75 HVAEADIVFVSVNTPTKTQGLGAGKA-----ADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIE 138 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~-----~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~ 138 (480)
+++++|+||+|+++|..... + . .+...++++++.+.++ .++++|+. .|.|.++...+.
T Consensus 72 ~~~~aD~Vii~v~~~~~~g~---~-r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~-~~Np~~~~~~~~ 134 (319)
T 1lld_A 72 ICRDADMVVITAGPRQKPGQ---S-RLELVGATVNILKAIMPNLVKV-APNAIYML-ITNPVDIATHVA 134 (319)
T ss_dssp GGTTCSEEEECCCCCCCTTC---C-HHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE-CCSSHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCC---C-HHHHHHHHHHHHHHHHHHHHHh-CCCceEEE-ecCchHHHHHHH
Confidence 58999999999987653200 0 1 1234455778888876 56666654 577877765543
No 113
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.82 E-value=2.9e-08 Score=99.49 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=80.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..|... |++|++||++++.... .. .+.....++++.++.||+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~-~~-------------------~g~~~~~~l~ell~~aDv 226 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVE-RA-------------------LGLQRVSTLQDLLFHSDC 226 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHH-HH-------------------HTCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhhH-hh-------------------cCCeecCCHHHHHhcCCE
Confidence 5899999999999999999877 9999999986542111 00 023445678888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -.+ ++..+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 227 V~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 276 (347)
T 1mx3_A 227 VTLHCGLNEHNHH-----LIN--------DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG 276 (347)
T ss_dssp EEECCCCCTTCTT-----SBS--------HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----HhH--------HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence 9999986422110 111 3455678999999999999888888888888775
No 114
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.82 E-value=3.1e-08 Score=98.88 Aligned_cols=106 Identities=12% Similarity=0.030 Sum_probs=79.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++....... +... .+++++++.||+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~-~~l~ell~~aDv 222 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPEVSASF--------------------GVQQ-LPLEEIWPLCDF 222 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHHHHHHT--------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhhhhhc--------------------Ccee-CCHHHHHhcCCE
Confidence 5899999999999999999876 9999999998654221111 1233 478888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... +..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 223 V~l~~P~t~~t--------------~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 223 ITVHTPLLPST--------------TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 272 (335)
T ss_dssp EEECCCCCTTT--------------TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEecCCCHHH--------------HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhC
Confidence 99999864321 1112 3456778999999999987776677788878764
No 115
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.81 E-value=3.7e-08 Score=99.13 Aligned_cols=107 Identities=14% Similarity=0.154 Sum_probs=78.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++......... +... .++++.++.||+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~--------------------g~~~-~~l~ell~~aDv 233 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF--RARIRVFDPWLPRSMLEEN--------------------GVEP-ASLEDVLTKSDF 233 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS--CCEEEEECSSSCHHHHHHT--------------------TCEE-CCHHHHHHSCSE
T ss_pred CEEEEecCCcccHHHHHhhhhC--CCEEEEECCCCCHHHHhhc--------------------Ceee-CCHHHHHhcCCE
Confidence 5899999999999999998776 9999999997532211111 2333 478888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|..... ..+. -......++++.++|+.|..++-..+.|.+.|++.
T Consensus 234 V~l~~Plt~~T-----------~~li--~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 283 (365)
T 4hy3_A 234 IFVVAAVTSEN-----------KRFL--GAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSG 283 (365)
T ss_dssp EEECSCSSCC--------------CC--CHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTT
T ss_pred EEEcCcCCHHH-----------Hhhc--CHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcC
Confidence 99999854221 1111 13456778999999999988777777888888764
No 116
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.81 E-value=2.8e-08 Score=98.60 Aligned_cols=116 Identities=17% Similarity=0.308 Sum_probs=80.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHH-hhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVT-QCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~-~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +..... .....+++.++++ +++++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALD--------ITHSMVMFGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 7999999999999999999998 88 999999998877754210 000000 0113467888888 678999
Q ss_pred cEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 80 DIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+||+|++.|..... .+ .-+...++++++.+.++.+ +.++++.| .|.+.
T Consensus 74 DiVi~avg~p~~~g~---~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~s-Np~~~ 126 (317)
T 2ewd_A 74 DVVIITASIPGRPKD---DRSELLFGNARILDSVAEGVKKYCP-NAFVICIT-NPLDV 126 (317)
T ss_dssp SEEEECCCCSSCCSS---CGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECC-SSHHH
T ss_pred CEEEEeCCCCCCCCC---cHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeC-ChHHH
Confidence 999999988764310 10 0123456788888888865 77666543 45444
No 117
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.81 E-value=2.4e-08 Score=99.12 Aligned_cols=115 Identities=17% Similarity=0.321 Sum_probs=74.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHH----HHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAA----WNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~----l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a 75 (480)
|||+|||+|++|.++|..|+.+ |+ +|+++|+++++++. +.... ++. ...+++.+..++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~-------------~~~~i~~~~~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGL-PFM-------------GQMSLYAGDYSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSC-CCT-------------TCEEEC--CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhH-Hhc-------------CCeEEEECCHHH
Confidence 6899999999999999999987 66 99999999876443 22221 110 123333233456
Q ss_pred hccCcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 76 VAEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++||+||+++++|.... .++ ..+.+.++++.+.+.++. ++.+|++ .|+|+++...+
T Consensus 72 ~~~aDvVii~~g~p~k~g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~~~~ 132 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPG---ETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV-VSNPVDIITYM 132 (318)
T ss_dssp GTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE-CSSSHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCC---cCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHHH
Confidence 999999999999886431 000 223445678888888885 5666666 58999886554
No 118
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.80 E-value=1.4e-08 Score=103.59 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=78.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++.. . .+......+++++++.||+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~yd~~~~~---------~--------------~~~~~~~~sl~ell~~aDv 211 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL--GMTVRYYDTSDKL---------Q--------------YGNVKPAASLDELLKTSDV 211 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCCC---------C--------------BTTBEECSSHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCcchh---------c--------------ccCcEecCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999986320 0 0123455788999999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +.....++++.++|+.|+.++-..+.+.+.|++.
T Consensus 212 V~lhvPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g 261 (416)
T 3k5p_A 212 VSLHVPSSKSTSK-----LIT--------EAKLRKMKKGAFLINNARGSDVDLEALAKVLQEG 261 (416)
T ss_dssp EEECCCC-----C-----CBC--------HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEeCCCCHHHhh-----hcC--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 9999986322100 111 3455668999999999998887788888888764
No 119
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.80 E-value=3.4e-09 Score=105.18 Aligned_cols=107 Identities=13% Similarity=0.116 Sum_probs=78.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||.++|..|... |++|++||++++..+.+ .......++++++++||+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 197 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF--GMKVLGVSRSGRERAGF---------------------DQVYQLPALNKMLAQADV 197 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCTTC---------------------SEEECGGGHHHHHHTCSE
T ss_pred ceEEEEEECHHHHHHHHHHHhC--CCEEEEEcCChHHhhhh---------------------hcccccCCHHHHHhhCCE
Confidence 5899999999999999999887 99999999975211100 111224578888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ ++....++++.++|+.|+.++-..+.|.+.|++.
T Consensus 198 V~l~lPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 247 (324)
T 3hg7_A 198 IVSVLPATRETHH-----LFT--------ASRFEHCKPGAILFNVGRGNAINEGDLLTALRTG 247 (324)
T ss_dssp EEECCCCCSSSTT-----SBC--------TTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeCCCCHHHHH-----HhH--------HHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcC
Confidence 9999985322110 111 2345668899999999998887788888888764
No 120
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.79 E-value=1.6e-08 Score=99.69 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=77.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..|... |++|++||++++ +. + .....++++.++.||+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~dr~~~--~~---~--------------------~~~~~~l~ell~~aDv 177 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPK--EG---P--------------------WRFTNSLEEALREARA 177 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCC--CS---S--------------------SCCBSCSHHHHTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcc--cc---C--------------------cccCCCHHHHHhhCCE
Confidence 6899999999999999999987 999999999764 11 1 0112466788899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... +..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 178 V~l~~P~~~~t--------------~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g 227 (303)
T 1qp8_A 178 AVCALPLNKHT--------------RGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKER 227 (303)
T ss_dssp EEECCCCSTTT--------------TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred EEEeCcCchHH--------------HHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhC
Confidence 99999864321 1111 2466778999999999998777777788888764
No 121
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.79 E-value=3.2e-08 Score=98.69 Aligned_cols=106 Identities=11% Similarity=0.181 Sum_probs=79.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|... |++|++||++++.... .. +.... ++++++++||+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~-~~--------------------g~~~~-~l~ell~~aDv 197 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDLK-EK--------------------GCVYT-SLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHH-HT--------------------TCEEC-CHHHHHHHCSE
T ss_pred ceEEEECcCHHHHHHHHHHHHC--cCEEEEECCCcchhhH-hc--------------------Cceec-CHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765422 21 12333 48888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ .. -++..+.++++.++|+.|+..+-..+.|.+.|++.
T Consensus 198 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 247 (334)
T 2pi1_A 198 ISLHVPYTKETHH-----MI--------NEERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeCCCChHHHH-----hh--------CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322110 11 13455678999999999988887788888888764
No 122
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.79 E-value=1.5e-08 Score=100.91 Aligned_cols=108 Identities=10% Similarity=0.080 Sum_probs=79.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++...+.... .+... .+++++++.||+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~-~~l~ell~~aDv 203 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQR-------------------LGLRQ-VACSELFASSDF 203 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHH-------------------HTEEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHh-------------------cCcee-CCHHHHHhhCCE
Confidence 5899999999999999999876 9999999998632222211 02343 378888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ .. -++..+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 204 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 253 (330)
T 4e5n_A 204 ILLALPLNADTLH-----LV--------NAELLALVRPGALLVNPCRGSVVDEAAVLAALERG 253 (330)
T ss_dssp EEECCCCSTTTTT-----CB--------CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 9999985322110 11 13566778999999999988777778888888764
No 123
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.79 E-value=2.1e-08 Score=103.04 Aligned_cols=209 Identities=13% Similarity=0.040 Sum_probs=115.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHc----CCCCeEEEEeCCHH-HHHHHH-CCCCCCCCCChHHHHHhhcCCCEEEecCHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALK----CPKIEVAVVDISVS-RIAAWN-GDQLPIYEPGLEDVVTQCRGRNLFFSTDIEK 74 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~----~~G~~V~~~D~~~~-~v~~l~-~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~ 74 (480)
|+||+|||+|.||.++|..|.+. +.|++|++.+++.+ ..+... .|.... .. .+.++++
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~--------------d~--ta~s~aE 117 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEE--------------SG--TLGDIWE 117 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTT--------------TT--CEEEHHH
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEe--------------cC--CCCCHHH
Confidence 47999999999999999999875 23688886655432 222222 221000 00 1246788
Q ss_pred HhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCcee-Ee
Q 011654 75 HVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQ-IL 153 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~-v~ 153 (480)
++++||+||++||.. ...+++++|.++++++++|++.+.+... .+.+... .. ..+.. +.
T Consensus 118 Aa~~ADVVILaVP~~---------------~~~eVl~eI~p~LK~GaILs~AaGf~I~---~le~~~i-~~-p~dv~VVr 177 (525)
T 3fr7_A 118 TVSGSDLVLLLISDA---------------AQADNYEKIFSHMKPNSILGLSHGFLLG---HLQSAGL-DF-PKNISVIA 177 (525)
T ss_dssp HHHHCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEESSSHHHH---HHHHTTC-CC-CTTSEEEE
T ss_pred HHhcCCEEEECCChH---------------HHHHHHHHHHHhcCCCCeEEEeCCCCHH---HHhhhcc-cC-CCCCcEEE
Confidence 899999999999842 2345777899999999997664432221 1211000 11 12222 23
Q ss_pred eCCcccccccccc-----c----cCCCCeEE-EEeCCCcchHHHHHHHHHHHhccCCCCeEEeCChhHHHHhhhH-H-hH
Q 011654 154 SNPEFLAEGTAIQ-----D----LFNPDRVL-IGGRETPEGQKAIQALKDVYAHWVPEDRIITTNLWSAELSKLA-A-NA 221 (480)
Q Consensus 154 ~~Pe~~~~G~a~~-----~----~~~~~~vv-iG~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~-~-N~ 221 (480)
.+|. .||..+. . ....+..+ +..+. +.+..+.+..++..++. ..++.++...---..++ + ..
T Consensus 178 VmPN--tPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~---tgea~e~alala~aiG~-~~vieTtf~eE~e~DLfgeqtv 251 (525)
T 3fr7_A 178 VCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDV---DGRATDVALGWSVALGS-PFTFATTLEQEYKSDIFGERGI 251 (525)
T ss_dssp EEES--SCHHHHHHHHHHHTTSTTCSCCEEEEEEECS---SSCHHHHHHHHHHHTTC-SEEEECCHHHHHHHHHHHHHTT
T ss_pred EecC--CCchhHHHHHhcccccccCCccEEEEcCCCC---CHHHHHHHHHHHHHCCC-CeeeeeeeeeehhHhhhhhHhh
Confidence 3453 2332210 0 11223233 22221 35678899999999874 33433443211111111 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Q 011654 222 FLAQRISSVNAMSALCEATGADVTQVSHAI 251 (480)
Q Consensus 222 ~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~ 251 (480)
+.....+++.-+.....+.|++++..+...
T Consensus 252 LsG~~pAlieA~~d~lVe~G~~pe~Ay~~~ 281 (525)
T 3fr7_A 252 LLGAVHGIVEALFRRYTEQGMDEEMAYKNT 281 (525)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 223334566666677777899988776654
No 124
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.79 E-value=1.2e-08 Score=103.72 Aligned_cols=108 Identities=14% Similarity=0.146 Sum_probs=79.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++...+...+ .++....++++.++.||+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~-------------------~G~~~~~~l~ell~~aDv 250 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKE-------------------LNLTWHATREDMYPVCDV 250 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHH-------------------HTCEECSSHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhh-------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999877 9999999997543322221 023444678888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|..... +..+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 251 V~l~~Plt~~t--------------~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 251 VTLNCPLHPET--------------EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp EEECSCCCTTT--------------TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEecCCchHH--------------HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 99999853221 1112 3455778999999999987776777788888764
No 125
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.78 E-value=6.7e-08 Score=94.63 Aligned_cols=118 Identities=19% Similarity=0.223 Sum_probs=78.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+.+ |+ +|.+||+++++++..... +....... ...+++.++| .+++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGAD-YSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHH--------HHHHHHTTTCCCEEEEESC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHH--------HHhhhhhcCCCCEEEEeCC-HHHhCC
Confidence 8999999999999999999988 77 999999999887632210 00000000 1235777888 667999
Q ss_pred CcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
||+||++.+.|..+. .++ ..+.+.+++..+.+.++. ++.++++- |.|..+.-
T Consensus 70 aDiVViaag~~~kpG---~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv-sNPvd~~t 125 (294)
T 1oju_A 70 SEIIVVTAGLARKPG---MTRLDLAHKNAGIIKDIAKKIVENA-PESKILVV-TNPMDVMT 125 (294)
T ss_dssp CSEEEECCCCCCCSS---CCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEEC-SSSHHHHH
T ss_pred CCEEEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-CCcchHHH
Confidence 999999999876431 010 113345566677788775 45555544 46776543
No 126
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.78 E-value=2.4e-08 Score=100.86 Aligned_cols=109 Identities=21% Similarity=0.190 Sum_probs=81.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIE-VAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..|... |++ |++||+++...+...+ .+.....++++.++.||
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aD 223 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEK-------------------VGARRVENIEELVAQAD 223 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHH-------------------TTEEECSSHHHHHHTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHh-------------------cCcEecCCHHHHHhcCC
Confidence 5899999999999999999877 897 9999987644333222 12445567888889999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.|.+.|++.
T Consensus 224 vV~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g 274 (364)
T 2j6i_A 224 IVTVNAPLHAGTKG-----LIN--------KELLSKFKKGAWLVNTARGAICVAEDVAAALESG 274 (364)
T ss_dssp EEEECCCCSTTTTT-----CBC--------HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEECCCCChHHHH-----HhC--------HHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 99999986422100 111 3455778999999999988777777788888764
No 127
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.77 E-value=3e-08 Score=97.77 Aligned_cols=116 Identities=18% Similarity=0.330 Sum_probs=73.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCC---CCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGD---QLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... ..++. ...+++. ++. +++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~-----------~~~~i~~-~~~-~a~ 65 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVS-----------HGTRVWH-GGH-SEL 65 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTT-----------SCCEEEE-ECG-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhc-----------CCeEEEE-CCH-HHh
Confidence 7999999999999999999998 88 999999999876643221 11110 0123443 455 468
Q ss_pred ccCcEEEEeccCCCCcCCCC-CCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchH
Q 011654 77 AEADIVFVSVNTPTKTQGLG-AGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTA 134 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~-~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~ 134 (480)
++||+||+|++.|....... +.-..+...++++++.+.++. ++.++++ .|.|.++.
T Consensus 66 ~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~-~tNP~~~~ 122 (304)
T 2v6b_A 66 ADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLV-TSNPVDLL 122 (304)
T ss_dssp TTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEE-CSSSHHHH
T ss_pred CCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEE-ecCchHHH
Confidence 99999999998775321000 000124456678888888885 6666665 56777653
No 128
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.77 E-value=3.2e-08 Score=101.14 Aligned_cols=105 Identities=16% Similarity=0.127 Sum_probs=79.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++.. . .+......++++.++.||+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-----~------------------~~~~~~~~~l~ell~~aDv 200 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKL-----P------------------LGNATQVQHLSDLLNMSDV 200 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCC-----C------------------CTTCEECSCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEEcCCchh-----c------------------cCCceecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999986421 0 0224455688898999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -.+ +.....++++.++|+.|+..+-..+.+.+.|++.
T Consensus 201 V~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g 250 (404)
T 1sc6_A 201 VSLHVPENPSTKN-----MMG--------AKEISLMKPGSLLINASRGTVVDIPALADALASK 250 (404)
T ss_dssp EEECCCSSTTTTT-----CBC--------HHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTT
T ss_pred EEEccCCChHHHH-----Hhh--------HHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcC
Confidence 9999986432110 111 2345678999999999998877777888888764
No 129
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.74 E-value=5.2e-08 Score=97.38 Aligned_cols=105 Identities=16% Similarity=0.232 Sum_probs=79.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++. ... ....+. ++++++++||+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~--~~~--------------------~~~~~~-~l~ell~~aDv 203 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM--GAKVIAYDVAYNP--EFE--------------------PFLTYT-DFDTVLKEADI 203 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCG--GGT--------------------TTCEEC-CHHHHHHHCSE
T ss_pred CeEEEEecCHHHHHHHHHHhhC--CCEEEEECCChhh--hhh--------------------cccccc-CHHHHHhcCCE
Confidence 5899999999999999999987 9999999998643 111 113333 78888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +.....++++.++|+.|+.++-..+.|.+.|++.
T Consensus 204 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 253 (343)
T 2yq5_A 204 VSLHTPLFPSTEN-----MIG--------EKQLKEMKKSAYLINCARGELVDTGALIKALQDG 253 (343)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----Hhh--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 9999985322111 111 2345668999999999998887788888888764
No 130
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.72 E-value=9.7e-08 Score=94.75 Aligned_cols=120 Identities=21% Similarity=0.277 Sum_probs=79.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.... ++...... ....++++++|+ +++++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~--------dl~~~~~~~~~~~~v~~t~d~-~a~~~ 75 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGL--------DIAESSPVDGFDAKFTGANDY-AAIEG 75 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHH--------HHHHHHHHHTCCCCEEEESSG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHH--------HHhchhhhcCCCCEEEEeCCH-HHHCC
Confidence 37999999999999999999988 77 99999999987753321 01111000 013457778888 57999
Q ss_pred CcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|.... .++ ..+...+++..+.+.++.+ +.++++- |.|..+.-.
T Consensus 76 aDiVIiaag~p~k~G---~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~iivv-tNPvd~~t~ 132 (324)
T 3gvi_A 76 ADVVIVTAGVPRKPG---MSRDDLLGINLKVMEQVGAGIKKYAP-EAFVICI-TNPLDAMVW 132 (324)
T ss_dssp CSEEEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC-CSSHHHHHH
T ss_pred CCEEEEccCcCCCCC---CCHHHHHHhhHHHHHHHHHHHHHHCC-CeEEEec-CCCcHHHHH
Confidence 999999999886541 110 1134556677778888874 5555443 467665433
No 131
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.71 E-value=1e-07 Score=94.53 Aligned_cols=121 Identities=17% Similarity=0.219 Sum_probs=79.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|++|.++|..|+.+....+|.++|+++++++..... +.... ......++++.+..+++++||+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~d--------l~~~~-~~~~~~~~v~~~~~~a~~~aDv 77 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMD--------LKHAT-PYSPTTVRVKAGEYSDCHDADL 77 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHH--------HHHHG-GGSSSCCEEEECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhh--------HHhhh-hhcCCCeEEEeCCHHHhCCCCE
Confidence 59999999999999999999872125899999999876642210 11100 0111123333344667999999
Q ss_pred EEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 82 VFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||++++.|.... .++ ..+...++++.+.+.++. ++.+|++ .|.|.++.-.
T Consensus 78 Vvi~ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~t~ 131 (317)
T 3d0o_A 78 VVICAGAAQKPG---ETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLV-ATNPVDILAY 131 (317)
T ss_dssp EEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHHHHH
T ss_pred EEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHH
Confidence 999999886431 000 123456777778888885 5666666 6789887544
No 132
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.70 E-value=6.4e-08 Score=96.12 Aligned_cols=112 Identities=20% Similarity=0.272 Sum_probs=77.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHH----HHCCCCCCCCCChHHHHHhhcCCCEE-EecCHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAA----WNGDQLPIYEPGLEDVVTQCRGRNLF-FSTDIEK 74 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~----l~~~~~~~~e~~l~~l~~~~~~~~l~-~t~d~~~ 74 (480)
|||+|||+|+||.++|..|+.+ |+ +|+++|+++++++. |+.+ .++.. .+++ .++++ +
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~------------~~v~i~~~~~-~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHG-KAFAP------------QPVKTSYGTY-E 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHT-GGGSS------------SCCEEEEECG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhc-ccccc------------CCeEEEeCcH-H
Confidence 7999999999999999999988 65 99999999998776 5543 33221 1223 24455 4
Q ss_pred HhccCcEEEEeccCCCCcCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 75 HVAEADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
++++||+||+++++|..+.. + +. +.+.+++..+.+.++.+ +.++++ -|.|..+.-
T Consensus 70 a~~~aDvVvi~ag~p~kpG~---~-R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlv-vtNPvd~~t 129 (326)
T 3pqe_A 70 DCKDADIVCICAGANQKPGE---T-RLELVEKNLKIFKGIVSEVMASGF-DGIFLV-ATNPVDILT 129 (326)
T ss_dssp GGTTCSEEEECCSCCCCTTC---C-HHHHHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHH
T ss_pred HhCCCCEEEEecccCCCCCc---c-HHHHHHHHHHHHHHHHHHHHHhcC-CeEEEE-cCChHHHHH
Confidence 69999999999998865410 1 22 23455667777777765 455544 356766543
No 133
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.68 E-value=6.7e-09 Score=102.79 Aligned_cols=107 Identities=9% Similarity=0.106 Sum_probs=78.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++..+. +. ......++++.+++||+
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~------------~~---------~~~~~~~l~ell~~aDi 196 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW--GFPLRCWSRSRKSWPG------------VE---------SYVGREELRAFLNQTRV 196 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCCCCTT------------CE---------EEESHHHHHHHHHTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCchhhhh------------hh---------hhcccCCHHHHHhhCCE
Confidence 6899999999999999999877 9999999997542110 00 01112467888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ .. -++....++++.++|+.|..+.-..+.|.+.|++.
T Consensus 197 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 246 (315)
T 3pp8_A 197 LINLLPNTAQTVG-----II--------NSELLDQLPDGAYVLNLARGVHVQEADLLAALDSG 246 (315)
T ss_dssp EEECCCCCGGGTT-----CB--------SHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchhhhh-----hc--------cHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhC
Confidence 9999984322110 11 13456778999999999988877778888888764
No 134
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.68 E-value=1.5e-08 Score=100.28 Aligned_cols=106 Identities=10% Similarity=0.140 Sum_probs=78.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..++..|++.. |+ +|++||+++++.+.+.+.. ..++..+++++++++++|
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~-g~~~V~v~dr~~~~~~~l~~~~----------------~~~~~~~~~~~e~v~~aD 198 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQF-SFKEVRIWNRTKENAEKFADTV----------------QGEVRVCSSVQEAVAGAD 198 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-CCSEEEEECSSHHHHHHHHHHS----------------SSCCEECSSHHHHHTTCS
T ss_pred cEEEEECCcHHHHHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHh----------------hCCeEEeCCHHHHHhcCC
Confidence 68999999999999999998752 44 8999999999988876420 002556788988899999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|... . ++.. +.++++++|++.|+..|.. +++.+.+.+.
T Consensus 199 iVi~atp~~~-~----------------v~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~ 242 (312)
T 2i99_A 199 VIITVTLATE-P----------------ILFG--EWVKPGAHINAVGASRPDW-RELDDELMKE 242 (312)
T ss_dssp EEEECCCCSS-C----------------CBCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHHH
T ss_pred EEEEEeCCCC-c----------------ccCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHhc
Confidence 9999987421 1 1111 4678899999888888776 4444444443
No 135
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.67 E-value=7.3e-08 Score=95.26 Aligned_cols=99 Identities=15% Similarity=0.153 Sum_probs=75.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++..+ .. ..++++.++.||+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-------------------------~~-~~~l~ell~~aDv 196 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF--GMRVVYHARTPKPLP-------------------------YP-FLSLEELLKEADV 196 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSS-------------------------SC-BCCHHHHHHHCSE
T ss_pred CEEEEEEECHHHHHHHHHHHHC--CCEEEEECCCCcccc-------------------------cc-cCCHHHHHhhCCE
Confidence 5899999999999999999987 999999999754221 00 2467778899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH-HHHHhhCCCCCEEEEecCCccchHHHHHHHHH
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RMIANVSNSNKIVVEKSTVPVKTAEAIEKILT 142 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~ 142 (480)
|++|+|..... +..+ +...+.++++.++|+.|+..+-..+.+.+.|+
T Consensus 197 V~l~~p~~~~t--------------~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 197 VSLHTPLTPET--------------HRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp EEECCCCCTTT--------------TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred EEEeCCCChHH--------------HhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 99999864221 1111 23456789999999999877766777877777
No 136
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.67 E-value=1.3e-07 Score=81.11 Aligned_cols=125 Identities=15% Similarity=0.236 Sum_probs=76.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC-CCCCCCCChHHHHHhhcCCCEEEecCH---HH-Hh
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD-QLPIYEPGLEDVVTQCRGRNLFFSTDI---EK-HV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~l~~~~~~~~l~~t~d~---~~-a~ 76 (480)
|+|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+. .......+ .++. .+ .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d---------------~~~~~~l~~~~~ 67 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGD---------------CTKIKTLEDAGI 67 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESC---------------TTSHHHHHHTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcC---------------CCCHHHHHHcCc
Confidence 7999999999999999999998 89999999999998887642 11100000 0111 11 25
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCC
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNP 156 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
.++|+||+|+|.+. ....+..+.+.++++.+|+. +..++..+ .+++.+ +..+.+|
T Consensus 68 ~~~d~vi~~~~~~~---------------~~~~~~~~~~~~~~~~ii~~--~~~~~~~~----~l~~~g----~~~v~~p 122 (140)
T 1lss_A 68 EDADMYIAVTGKEE---------------VNLMSSLLAKSYGINKTIAR--ISEIEYKD----VFERLG----VDVVVSP 122 (140)
T ss_dssp TTCSEEEECCSCHH---------------HHHHHHHHHHHTTCCCEEEE--CSSTTHHH----HHHHTT----CSEEECH
T ss_pred ccCCEEEEeeCCch---------------HHHHHHHHHHHcCCCEEEEE--ecCHhHHH----HHHHcC----CCEEECH
Confidence 68999999987421 11223344555666676653 23344433 334432 2345778
Q ss_pred cccccccccccc
Q 011654 157 EFLAEGTAIQDL 168 (480)
Q Consensus 157 e~~~~G~a~~~~ 168 (480)
++...+.....+
T Consensus 123 ~~~~~~~~~~~~ 134 (140)
T 1lss_A 123 ELIAANYIEKLI 134 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 776655444333
No 137
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.66 E-value=1.1e-07 Score=94.36 Aligned_cols=120 Identities=16% Similarity=0.171 Sum_probs=81.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... +..........++..++|+++ +++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~D--------L~~~~~~~~~~~i~~t~d~~~-~~d 89 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMD--------LEHGSLFLHTAKIVSGKDYSV-SAG 89 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHH--------HHHHGGGSCCSEEEEESSSCS-CSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHH--------hhhhhhcccCCeEEEcCCHHH-hCC
Confidence 37999999999999999999988 65 999999999877654321 000000001235777889876 999
Q ss_pred CcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|..+. .++ .-+.+.+++..+.+.++. ++.++++- |.|..+.-.
T Consensus 90 aDiVIitaG~p~kpG---~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvv-tNPvdi~t~ 146 (330)
T 3ldh_A 90 SKLVVITAGARQQEG---ESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELH-PELGTDKNK 146 (330)
T ss_dssp CSEEEECCSCCCCSS---CCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHHHHH
T ss_pred CCEEEEeCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeC-CCccHHHHH
Confidence 999999999886541 111 123455677778888885 45555443 467665433
No 138
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.61 E-value=4.9e-07 Score=89.34 Aligned_cols=118 Identities=26% Similarity=0.340 Sum_probs=78.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC--HHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecCHHHHhc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDIS--VSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~--~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d~~~a~~ 77 (480)
+||+|||+|.||.++|..|+.+ |+ +|+++|++ +++.+..... +.+..... ...+++.+++++ +++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~d--------l~~~~~~~~~~~~i~~t~d~~-a~~ 77 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALD--------MLEASPVQGFDANIIGTSDYA-DTA 77 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHH--------HHHHHHHHTCCCCEEEESCGG-GGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhh--------HHHhhhhccCCCEEEEcCCHH-HhC
Confidence 5899999999999999999998 88 99999999 6665544311 11110001 234677788865 599
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+||++.++|..+. .+ +. +...+++..+.+.++.+ +.++++- |.|..+.-.
T Consensus 78 ~aDvVIiaag~p~kpg---~~-R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvv-sNPvd~~t~ 135 (315)
T 3tl2_A 78 DSDVVVITAGIARKPG---MS-RDDLVATNSKIMKSITRDIAKHSP-NAIIVVL-TNPVDAMTY 135 (315)
T ss_dssp TCSEEEECCSCCCCTT---CC-HHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC-CSSHHHHHH
T ss_pred CCCEEEEeCCCCCCCC---CC-HHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEC-CChHHHHHH
Confidence 9999999999886541 11 12 23345667777778764 4555443 456665433
No 139
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.60 E-value=5.8e-08 Score=96.94 Aligned_cols=106 Identities=14% Similarity=0.185 Sum_probs=78.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++++. +.+. ..+.+++++.++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~~~~--------------------~~~~~~l~ell~~aDv 202 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPE--LEKK--------------------GYYVDSLDDLYKQADV 202 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHH--HHHT--------------------TCBCSCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcchh--HHhh--------------------CeecCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999987643 1211 1123467788899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 203 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 203 ISLHVPDVPANVH-----MIN--------DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp EEECSCCCGGGTT-----CBS--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCcHHHHH-----HHh--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985422100 111 2345668899999999988777778888888764
No 140
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.59 E-value=3.6e-07 Score=91.25 Aligned_cols=117 Identities=19% Similarity=0.219 Sum_probs=77.6
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHH----HHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAA----WNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~----l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+ |++|.++|..++..+...+|+++|+++++++. |+.+. + ...++++++++.+++
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~------------~~~~i~~t~d~~~al 74 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--F------------EGLNLTFTSDIKEAL 74 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--C------------TTCCCEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--C------------CCCceEEcCCHHHHh
Confidence 69999998 99999999999987222589999999987765 33321 1 113577889998889
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
++||+||+|..+|.... ..+.| ...+++..+.+.++.++..+|++ -|.|..+.-.+
T Consensus 75 ~dADvVvitaG~p~kpG----~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlv-vsNPvd~~t~i 135 (343)
T 3fi9_A 75 TDAKYIVSSGGAPRKEG----MTREDLLKGNAEIAAQLGKDIKSYCPDCKHVII-IFNPADITGLV 135 (343)
T ss_dssp TTEEEEEECCC-----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEE-CSSSHHHHHHH
T ss_pred CCCCEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEE-ecCchHHHHHH
Confidence 99999999998876431 01222 34456666777777765542333 35677665443
No 141
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.59 E-value=4e-07 Score=90.27 Aligned_cols=120 Identities=21% Similarity=0.280 Sum_probs=80.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... +.+.... ....+++.++++ +++++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~d--------L~~~~~~~~~~~~v~~t~d~-~a~~~ 73 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALD--------LLQTCPIEGVDFKVRGTNDY-KDLEN 73 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHH--------HHhhhhhcCCCcEEEEcCCH-HHHCC
Confidence 37999999999999999999987 66 999999999876533210 0000000 012356667786 56999
Q ss_pred CcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|.... .++ ..+...+++..+.+.++.+ +.++++- |.|.++.-.
T Consensus 74 aDvVIi~ag~p~k~G---~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vivv-tNPvd~~t~ 130 (321)
T 3p7m_A 74 SDVVIVTAGVPRKPG---MSRDDLLGINIKVMQTVGEGIKHNCP-NAFVICI-TNPLDIMVN 130 (321)
T ss_dssp CSEEEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC-CSSHHHHHH
T ss_pred CCEEEEcCCcCCCCC---CCHHHHHHHhHHHHHHHHHHHHHHCC-CcEEEEe-cCchHHHHH
Confidence 999999998876431 110 1134556777788888874 5555543 677776443
No 142
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.57 E-value=3.7e-07 Score=90.37 Aligned_cols=113 Identities=17% Similarity=0.225 Sum_probs=80.3
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHH--HHHCCCCCCCCCChHHHHHhhcCCCEEE---ecCHH
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPK--IEVAVVDISVSRIA--AWNGDQLPIYEPGLEDVVTQCRGRNLFF---STDIE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~--~l~~~~~~~~e~~l~~l~~~~~~~~l~~---t~d~~ 73 (480)
|||+|||+ |++|.+++..|+.. | ++|.++|+++.... .+.... ...+++. ++|++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~---------------~~~~l~~~~~t~d~~ 63 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIE---------------TRATVKGYLGPEQLP 63 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSS---------------SSCEEEEEESGGGHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccC---------------cCceEEEecCCCCHH
Confidence 79999998 99999999999987 6 79999999872221 222211 0124565 36788
Q ss_pred HHhccCcEEEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 74 KHVAEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++++||+||++.+.|.... ....|+ ..++++.+.+.++.+. .++++ .|.|.++.-.+
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv-~sNPv~~~~~i 126 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPG----MTRDDLFNTNATIVATLTAACAQHCPD-AMICI-ISNPVNSTIPI 126 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTT----CCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEE-CSSCHHHHHHH
T ss_pred HHhCCCCEEEECCCcCCCCC----CcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEE-ECCCcchhHHH
Confidence 88999999999998876431 113455 6778888888888754 44544 47888876543
No 143
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.55 E-value=8e-08 Score=95.88 Aligned_cols=105 Identities=12% Similarity=0.144 Sum_probs=78.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. + . ....+ .++++.++.||+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~-~-------------------~~~~~-~~l~ell~~aDv 200 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKG--D-H-------------------PDFDY-VSLEDLFKQSDV 200 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSS--C-C-------------------TTCEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCcchh--h-H-------------------hcccc-CCHHHHHhcCCE
Confidence 5899999999999999999987 99999999975421 0 0 01223 378888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 201 V~~~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g 250 (333)
T 1dxy_A 201 IDLHVPGIEQNTH-----IIN--------EAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSG 250 (333)
T ss_dssp EEECCCCCGGGTT-----SBC--------HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEcCCCchhHHH-----HhC--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999986432110 111 3345678999999999998777778888888764
No 144
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.54 E-value=1.1e-07 Score=96.03 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=77.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+..+..+ .+ . ...++++++++||+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~---~~--------------------~-~~~sl~ell~~aDi 173 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL--GIRTLLCDPPRAARG---DE--------------------G-DFRTLDELVQEADV 173 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHTT---CC--------------------S-CBCCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCChHHhc---cC--------------------c-ccCCHHHHHhhCCE
Confidence 5899999999999999999987 999999997543211 00 1 13578888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|..... ..+ +..+. -++....++++.++|+.|+.++-..+.|.+.|++.
T Consensus 174 V~l~~Plt~~g------~~~-T~~li--~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 174 LTFHTPLYKDG------PYK-TLHLA--DETLIRRLKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp EEECCCCCCSS------TTC-CTTSB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCcCCccc------ccc-chhhc--CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999854320 000 01111 12455668999999999998887788888888764
No 145
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.52 E-value=1.4e-07 Score=95.34 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=78.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..|... |++|++||++++.. ..+ .. ..++++.+++||+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~---~~g--------------------~~-~~~l~ell~~aDv 170 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL--GWKVLVCDPPRQAR---EPD--------------------GE-FVSLERLLAEADV 170 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHH---STT--------------------SC-CCCHHHHHHHCSE
T ss_pred CEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCChhhh---ccC--------------------cc-cCCHHHHHHhCCE
Confidence 5899999999999999999987 99999999866432 111 01 2467888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ..+ +..+. -+...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 171 V~l~~Plt~~g------~~~-T~~li--~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g 224 (380)
T 2o4c_A 171 ISLHTPLNRDG------EHP-TRHLL--DEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGG 224 (380)
T ss_dssp EEECCCCCSSS------SSC-CTTSB--CHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCcccc------ccc-hhhhc--CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999864320 000 11111 13456778999999999998877778888888764
No 146
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.52 E-value=1.1e-07 Score=94.97 Aligned_cols=105 Identities=11% Similarity=0.115 Sum_probs=77.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. + + ....+ .++++.++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~-~-------------------~~~~~-~~l~ell~~aDv 201 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM--GATVIGEDVFEIKG--I-E-------------------DYCTQ-VSLDEVLEKSDI 201 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCS--C-T-------------------TTCEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCccHH--H-H-------------------hcccc-CCHHHHHhhCCE
Confidence 5899999999999999999887 99999999875421 1 0 01222 378888899999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 202 V~~~~p~t~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 202 ITIHAPYIKENGA-----VVT--------RDFLKKMKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp EEECCCCCTTTCC-----SBC--------HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchHHHH-----HhC--------HHHHhhCCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 9999985422110 111 2445668999999999988777778888888764
No 147
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.52 E-value=4.5e-07 Score=90.19 Aligned_cols=113 Identities=19% Similarity=0.247 Sum_probs=77.7
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCC--CeEEEEeCCHHH--HHHHHCCCCCCCCCChHHHHHhhcCCCEEE---ecCH
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPK--IEVAVVDISVSR--IAAWNGDQLPIYEPGLEDVVTQCRGRNLFF---STDI 72 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G--~~V~~~D~~~~~--v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~---t~d~ 72 (480)
.|||+||| +|++|.+++..|+.+ | ++|+++|++++. ...+..... ...++. ++|+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~---------------~~~v~~~~~t~d~ 70 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDT---------------GAVVRGFLGQQQL 70 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCS---------------SCEEEEEESHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccc---------------cceEEEEeCCCCH
Confidence 37999999 899999999999987 6 899999998762 222332110 113444 4577
Q ss_pred HHHhccCcEEEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 73 EKHVAEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+++++++|+||+|.+.|.... ....|+ ..++++++.+.++.+ +.+|++ +|+|.+++-.
T Consensus 71 ~~al~gaDvVi~~ag~~~~~g----~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv-~SNPv~~~~~ 133 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPRKPG----MTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNL-ISNPVNSTVP 133 (326)
T ss_dssp HHHHTTCSEEEECCCCCCCSS----CCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEE-CCSSHHHHHH
T ss_pred HHHcCCCCEEEEcCCcCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEE-ECCchHHHHH
Confidence 888999999999998875431 112333 556666777777664 455554 6889887543
No 148
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.51 E-value=4.3e-07 Score=89.67 Aligned_cols=119 Identities=16% Similarity=0.229 Sum_probs=73.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+.+ |. +|+++|+++++++.... ++....... ...++..++++ +++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~--------DL~~~~~~~~~~~~v~~~~~~-~a~~~ 69 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKAL--------DMRESSPIHGFDTRVTGTNDY-GPTED 69 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHH--------HHHHHHHHHTCCCEEEEESSS-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHH--------HHhccccccCCCcEEEECCCH-HHhCC
Confidence 8999999999999999999987 55 99999999987654321 111111000 11234445554 56999
Q ss_pred CcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||+|.+.|..+. .++ ..+...+++..+.+.++.+ +.++++ -|.|..+.-.
T Consensus 70 aDvVii~ag~~~kpG---~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~viv-vtNPvd~~t~ 126 (314)
T 3nep_X 70 SDVCIITAGLPRSPG---MSRDDLLAKNTEIVGGVTEQFVEGSP-DSTIIV-VANPLDVMTY 126 (314)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCT-TCEEEE-CCSSHHHHHH
T ss_pred CCEEEECCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHHhCC-CcEEEe-cCCchhHHHH
Confidence 999999999876431 111 1133445666677777754 455544 3567766444
No 149
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.51 E-value=5.9e-07 Score=93.45 Aligned_cols=79 Identities=20% Similarity=0.189 Sum_probs=58.3
Q ss_pred cEEEEEcCChhH--HHHHHHHHHc--CCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGYVG--GPTMAVIALK--CPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G--~~lA~~La~~--~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.|| .++|..|+.. .+|++|++||+++++++.++.. ...++.. ....++++++|+++++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~--------~~~~l~~~~~~~~I~~ttD~~eal 75 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTI--------AKKYVEEVGADLKFEKTMNLDDVI 75 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHH--------HHHHhccCCCCcEEEEECCHHHHh
Confidence 699999999975 5556677742 2378999999999998876532 1222211 1234688899998889
Q ss_pred ccCcEEEEeccC
Q 011654 77 AEADIVFVSVNT 88 (480)
Q Consensus 77 ~~aDvVii~Vpt 88 (480)
++||+||+++|.
T Consensus 76 ~dAD~VIiaagv 87 (480)
T 1obb_A 76 IDADFVINTAMV 87 (480)
T ss_dssp TTCSEEEECCCT
T ss_pred CCCCEEEECCCc
Confidence 999999999975
No 150
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.48 E-value=9.5e-07 Score=87.50 Aligned_cols=116 Identities=21% Similarity=0.256 Sum_probs=74.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.+|.+++..|+.+ +. ++.++|+++++++..... +.... ....++++.+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~d-----------l~~~~~~~~~~~v~~~~~~a~~~ 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALD-----------LEDAQAFTAPKKIYSGEYSDCKD 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH-----------HHGGGGGSCCCEEEECCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHH-----------HHHHHHhcCCeEEEECCHHHhCC
Confidence 6999999999999999999987 54 899999999887653221 10000 00233444444567999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|... + .+ ..|+ ..+++..+.+.++.+ +.++++ -|.|.++...
T Consensus 73 aDvVii~ag~~~~~-g--~~-R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv-~tNPv~~~t~ 129 (318)
T 1ez4_A 73 ADLVVITAGAPQKP-G--ES-RLDLVNKNLNILSSIVKPVVDSGF-DGIFLV-AANPVDILTY 129 (318)
T ss_dssp CSEEEECCCC--------------CHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHHH
T ss_pred CCEEEECCCCCCCC-C--CC-HHHHHHHHHHHHHHHHHHHHHhCC-CeEEEE-eCCcHHHHHH
Confidence 99999999887543 1 11 2233 566777778888764 555555 3788877544
No 151
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.48 E-value=4.4e-07 Score=85.92 Aligned_cols=97 Identities=12% Similarity=0.208 Sum_probs=68.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-ccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-AEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-~~a 79 (480)
|||+|||+|.||..++..|.+. |++| .+||+++ +. . . ..+|+++.+ .++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~--g~~lv~v~d~~~-~~-----~-------------------~--~~~~~~~l~~~~~ 51 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN--GFEIAAILDVRG-EH-----E-------------------K--MVRGIDEFLQREM 51 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSC-CC-----T-------------------T--EESSHHHHTTSCC
T ss_pred CEEEEECCCHHHHHHHHHHhcC--CCEEEEEEecCc-ch-----h-------------------h--hcCCHHHHhcCCC
Confidence 7999999999999999999865 8997 6899863 11 0 1 457788877 689
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchH---HHHHHHHHhcC
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTA---EAIEKILTHNS 145 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~---~~l~~~l~~~~ 145 (480)
|+|++|+|+.. ..+.+...++.|..|+++||..+... +++.+..++.+
T Consensus 52 DvVv~~~~~~~------------------~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g 102 (236)
T 2dc1_A 52 DVAVEAASQQA------------------VKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTG 102 (236)
T ss_dssp SEEEECSCHHH------------------HHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHC
T ss_pred CEEEECCCHHH------------------HHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcC
Confidence 99999987421 12222344567888999888654433 56666665543
No 152
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.47 E-value=1.4e-06 Score=86.18 Aligned_cols=119 Identities=16% Similarity=0.186 Sum_probs=76.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh--hcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ--CRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~--~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+....+|+++|+++++.+....+ +... ......+.+++..+++++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~d-----------l~~~~~~~~~~~~i~~~~~~al~~ 74 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-----------FNHGKVFAPKPVDIWHGDYDDCRD 74 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-----------HHHHTTSSSSCCEEEECCGGGTTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhh-----------HHHHhhhcCCCeEEEcCcHHHhCC
Confidence 379999999999999999998872234899999999866543221 1111 011123333444566999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||+|.|.|.... .. ..| .+.+++.++.+.++.+ +.++++ -|.|.+..-.
T Consensus 75 aDvViia~~~~~~~g---~~-r~dl~~~n~~i~~~i~~~i~~~~p-~a~~iv-~tNPv~~~~~ 131 (316)
T 1ldn_A 75 ADLVVICAGANQKPG---ET-RLDLVDKNIAIFRSIVESVMASGF-QGLFLV-ATNPVDILTY 131 (316)
T ss_dssp CSEEEECCSCCCCTT---TC-SGGGHHHHHHHHHHHHHHHHHHTC-CSEEEE-CSSSHHHHHH
T ss_pred CCEEEEcCCCCCCCC---CC-HHHHHHcChHHHHHHHHHHHHHCC-CCEEEE-eCCchHHHHH
Confidence 999999998876431 11 122 2555667777777764 555544 4677776544
No 153
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.44 E-value=8.3e-07 Score=92.34 Aligned_cols=81 Identities=15% Similarity=0.185 Sum_probs=59.7
Q ss_pred cEEEEEcCChh-HHHHHHHHHHc--C-CCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGYV-GGPTMAVIALK--C-PKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~~--~-~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.+ |.++|..|+.+ . ++++|++||+++++++.++.- .+.++.. ....++++++|+++++
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~--------~~~~l~~~~~~~~I~~t~D~~eal 100 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGA--------CDVFIREKAPDIEFAATTDPEEAF 100 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHH--------HHHHHHHHCTTSEEEEESCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHH--------HHHHhccCCCCCEEEEECCHHHHH
Confidence 39999999999 66677777765 2 267999999999998876531 0112111 1234688889998889
Q ss_pred ccCcEEEEeccCCC
Q 011654 77 AEADIVFVSVNTPT 90 (480)
Q Consensus 77 ~~aDvVii~Vptp~ 90 (480)
++||+||+++|++.
T Consensus 101 ~~AD~VViaag~~~ 114 (472)
T 1u8x_X 101 TDVDFVMAHIRVGK 114 (472)
T ss_dssp SSCSEEEECCCTTH
T ss_pred cCCCEEEEcCCCcc
Confidence 99999999998753
No 154
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.44 E-value=1.9e-06 Score=85.08 Aligned_cols=117 Identities=18% Similarity=0.265 Sum_probs=77.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC---CCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD---QLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|++|.+++..|+.+....++.++|+++++++..... ..++ ...-+++. ++ .+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~-----------~~~~~v~~-~~-~~a~~~ 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPF-----------AHPVWVWA-GS-YGDLEG 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGG-----------SCCCEEEE-CC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhh-----------cCCeEEEE-CC-HHHhCC
Confidence 79999999999999999999873336899999999877643211 0010 00112333 34 556999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+||++.+.|... + . ...| ...+++..+.+.++.+ +.++++- |.|.++.-.+
T Consensus 68 aD~Vii~ag~~~~~-g--~-~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~-tNPv~~~t~~ 125 (310)
T 2xxj_A 68 ARAVVLAAGVAQRP-G--E-TRLQLLDRNAQVFAQVVPRVLEAAP-EAVLLVA-TNPVDVMTQV 125 (310)
T ss_dssp EEEEEECCCCCCCT-T--C-CHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC-SSSHHHHHHH
T ss_pred CCEEEECCCCCCCC-C--c-CHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEe-cCchHHHHHH
Confidence 99999999887643 1 0 0112 4556677777888855 4555553 7888875543
No 155
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.43 E-value=9.6e-07 Score=87.75 Aligned_cols=117 Identities=19% Similarity=0.252 Sum_probs=77.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
.+||+|||+|.||.++|..|+.+ |. +|+++|+++++++..... +...........+..++|+++ +++
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~D--------L~~~~~~~~~~~i~~~~d~~~-~~~ 87 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMD--------LQHGSLFLKTPKIVSSKDYSV-TAN 87 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHH--------HHHTGGGCSCCEEEECSSGGG-GTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHh--------hhhhhhccCCCeEEEcCCHHH-hCC
Confidence 37999999999999999999988 65 899999999877653321 000000000123556788874 999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTA 134 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~ 134 (480)
||+||++...|..+ | .+ +.| ...+++..+.+.++.+ +.++++ -|.|..+.
T Consensus 88 aDiVvi~aG~~~kp-G--~t-R~dL~~~N~~I~~~i~~~i~~~~p-~a~vlv-vtNPvdi~ 142 (331)
T 4aj2_A 88 SKLVIITAGARQQE-G--ES-RLNLVQRNVNIFKFIIPNVVKYSP-QCKLLI-VSNPVDIL 142 (331)
T ss_dssp EEEEEECCSCCCCT-T--CC-GGGGHHHHHHHHHHHHHHHHHHCT-TCEEEE-CSSSHHHH
T ss_pred CCEEEEccCCCCCC-C--cc-HHHHHHHHHHHHHHHHHHHHHHCC-CeEEEE-ecChHHHH
Confidence 99999999887643 1 11 233 3445666677888754 455544 34676654
No 156
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.41 E-value=1.8e-06 Score=85.61 Aligned_cols=71 Identities=14% Similarity=0.289 Sum_probs=56.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-cc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-AE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-~~ 78 (480)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +.....+|+++.+ .+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~~~~v~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-GEYQLVAIYSRKLETAATFASRY-----------------QNIQLFDQLEVFFKSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TSEEEEEEECSSHHHHHHHGGGS-----------------SSCEEESCHHHHHTSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHHc-----------------CCCeEeCCHHHHhCCC
Confidence 68999999999999999999875 467764 8999999888766421 2235678898877 78
Q ss_pred CcEEEEeccCC
Q 011654 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 63 ~D~V~i~tp~~ 73 (325)
T 2ho3_A 63 FDLVYIASPNS 73 (325)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEeCChH
Confidence 99999998854
No 157
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.41 E-value=1.8e-06 Score=85.78 Aligned_cols=116 Identities=23% Similarity=0.288 Sum_probs=75.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC---CCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD---QLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.+|.+++..|+.+...-++.++|+++++++..... ..++ ...++++.+..+++++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~i~~~~~~a~~~ 76 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPF-------------TSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------SCCCEEEECCGGGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHh-------------cCCeEEEECCHHHhCC
Confidence 79999999999999999998872123899999999877653221 0011 0233444444567999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|... + . ...|+ ..+++..+.+.++.+ +.+|++ -|.|.++...
T Consensus 77 aDvVii~ag~~~k~-g--~-~R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv-~tNPv~~~t~ 133 (326)
T 2zqz_A 77 ADLVVITAGAPQKP-G--E-TRLDLVNKNLKILKSIVDPIVDSGF-NGIFLV-AANPVDILTY 133 (326)
T ss_dssp CSEEEECCCCC---------CHHHHHHHHHHHHHHHHHHHHHHTC-CSEEEE-CSSSHHHHHH
T ss_pred CCEEEEcCCCCCCC-C--C-CHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEE-eCCcHHHHHH
Confidence 99999999887543 0 0 01122 556677777888864 555555 3788887544
No 158
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.41 E-value=5.6e-07 Score=74.69 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=53.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK-IEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|+|+|.||..++..|.+. | ++|+++|+++++.+.+......... ..+.-..+..++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~------------~d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQ------------VDAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEE------------ecCCCHHHHHHHHcCC
Confidence 36899999999999999999998 8 9999999999998887732111100 0010012344556789
Q ss_pred cEEEEeccC
Q 011654 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||.|+|.
T Consensus 71 d~vi~~~~~ 79 (118)
T 3ic5_A 71 DAVISAAPF 79 (118)
T ss_dssp SEEEECSCG
T ss_pred CEEEECCCc
Confidence 999999863
No 159
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.40 E-value=1.3e-06 Score=86.58 Aligned_cols=114 Identities=23% Similarity=0.304 Sum_probs=72.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCC---CCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGD---QLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.||.++|..|+.+ |. ++.++|+++++++..... ..++ . ...+.+++..+++
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~------------~-~~~~i~~~~~~a~ 74 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPF------------T-SPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGG------------S-CCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhh------------c-CCcEEEECcHHHh
Confidence 7999999999999999999987 65 899999999887744321 0111 0 1334444444569
Q ss_pred ccCcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
++||+||++.+.|..+. .++ .-+...+++..+.+.++.+ +.++++- |.|..+.-
T Consensus 75 ~~aDiVvi~ag~~~kpG---~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi~t 132 (326)
T 3vku_A 75 KDADLVVITAGAPQKPG---ETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDILT 132 (326)
T ss_dssp TTCSEEEECCCCC-------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHHHH
T ss_pred cCCCEEEECCCCCCCCC---chHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHHHH
Confidence 99999999998875431 111 1133446777778888765 4555443 56776543
No 160
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.40 E-value=2e-06 Score=84.79 Aligned_cols=118 Identities=21% Similarity=0.243 Sum_probs=79.2
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHH-hhcCCCEEEecCHHHHhccCc
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVT-QCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~-~~~~~~l~~t~d~~~a~~~aD 80 (480)
||+|||+|.||.++|..++.+ |+ +|.++|+++++++..... +.+... ....-+++.++|+ +++++||
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~--~l~el~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~aD 69 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR--GYDDLLLIARTPGKPQGEALD--------LAHAAAELGVDIRISGSNSY-EDMRGSD 69 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTCS
T ss_pred CEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCChhhHHHHHHH--------HHHhhhhcCCCeEEEECCCH-HHhCCCC
Confidence 799999999999999999987 66 799999998877643211 111100 0113357777887 5699999
Q ss_pred EEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 81 IVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||++.+.|... + .++ .-+...+++.++.+.++. ++.++++- |.|.+....
T Consensus 70 ~Vi~~ag~~~k~-G--~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~ 124 (308)
T 2d4a_B 70 IVLVTAGIGRKP-G--MTREQLLEANANTMADLAEKIKAYA-KDAIVVIT-TNPVDAMTY 124 (308)
T ss_dssp EEEECCSCCCCS-S--CCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHH
T ss_pred EEEEeCCCCCCC-C--CcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCchHHHHH
Confidence 999999887643 1 110 112344667777888886 45555553 678776544
No 161
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.40 E-value=1.2e-06 Score=87.10 Aligned_cols=70 Identities=21% Similarity=0.238 Sum_probs=56.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|+||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+. -++. .+|+++.++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~------------------~~~~-~~~~~~~l~~~ 62 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGN-ADARLVAVADAFPAAAEAIAGA------------------YGCE-VRTIDAIEAAA 62 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHH------------------TTCE-ECCHHHHHHCT
T ss_pred ceEEEEECCCHHHHHHHHHHhhC-CCcEEEEEECCCHHHHHHHHHH------------------hCCC-cCCHHHHhcCC
Confidence 36999999999999999999875 578877 699999988877642 1234 678888877
Q ss_pred cCcEEEEeccCCC
Q 011654 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
++|+|++|+|+..
T Consensus 63 ~~D~V~i~tp~~~ 75 (331)
T 4hkt_A 63 DIDAVVICTPTDT 75 (331)
T ss_dssp TCCEEEECSCGGG
T ss_pred CCCEEEEeCCchh
Confidence 7999999988643
No 162
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.40 E-value=8e-07 Score=86.21 Aligned_cols=93 Identities=11% Similarity=0.134 Sum_probs=70.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|++. |++|+++|+++++.+.+.+.. ++.+.+++.++++++|+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~------------------g~~~~~~~~~~~~~aDi 189 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKF------------------PLEVVNSPEEVIDKVQV 189 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTS------------------CEEECSCGGGTGGGCSE
T ss_pred CEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHc------------------CCeeehhHHhhhcCCCE
Confidence 6899999999999999999998 889999999999988876421 24455577777889999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
||.|+|.+...+ ... .+. ...++++++|++.++
T Consensus 190 Vi~atp~~~~~~------~~~------~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 190 IVNTTSVGLKDE------DPE------IFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp EEECSSTTSSTT------CCC------SSC--GGGCCTTSEEEESSS
T ss_pred EEEeCCCCCCCC------CCC------CCC--HHHcCCCCEEEEcCC
Confidence 999998754210 000 010 245778999988776
No 163
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.39 E-value=2.4e-06 Score=83.44 Aligned_cols=120 Identities=21% Similarity=0.250 Sum_probs=76.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.+|.++|..|+.+..--++.++|+++++.+..... +....... ....+..++|+++ +++||
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~D--------L~h~~~~~~~~~~i~~~~d~~~-~~~aD 71 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGADYSL-LKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH--------HHHHHGGGTCCCEEEEESCGGG-GTTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhh--------hhcccccCCCCCeEecCCCHHH-hCCCC
Confidence 89999999999999999998762234899999998765532210 11100001 1123566778765 99999
Q ss_pred EEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 81 IVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
+|+++-..|..+. .++ ..+.+.+++..+.+.++.+...+++ -|.|..+.-
T Consensus 72 vVvitAG~prkpG---mtR~dLl~~Na~I~~~i~~~i~~~~p~aivlv--vsNPvd~~t 125 (294)
T 2x0j_A 72 IIVVTAGLARKPG---MTRLDLAHKNAGIIKDIAKKIVENAPESKILV--VTNPMDVMT 125 (294)
T ss_dssp EEEECCCCCCCSS---SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE--CSSSHHHHH
T ss_pred EEEEecCCCCCCC---CchHHHHHHHHHHHHHHHHHHHhcCCceEEEE--ecCcchhhH
Confidence 9999998776541 111 1134455667777887766544333 366766543
No 164
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.38 E-value=3.1e-07 Score=79.96 Aligned_cols=70 Identities=14% Similarity=0.310 Sum_probs=57.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..++..|... |++|+++|+++++.+.+.+.. .......++..++++++|+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~----------------~~~~~~~~~~~~~~~~~Di 83 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKY----------------EYEYVLINDIDSLIKNNDV 83 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHH----------------TCEEEECSCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHh----------------CCceEeecCHHHHhcCCCE
Confidence 6899999999999999999886 889999999999988765420 1123456778888899999
Q ss_pred EEEeccCC
Q 011654 82 VFVSVNTP 89 (480)
Q Consensus 82 Vii~Vptp 89 (480)
||.|+|.+
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99998865
No 165
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.38 E-value=1.3e-06 Score=87.37 Aligned_cols=70 Identities=21% Similarity=0.284 Sum_probs=57.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +....+|+++.++ +
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~------------------g~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-PDLELVVIADPFIEGAQRLAEAN------------------GAEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHTT------------------TCEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc------------------CCceeCCHHHHhcCCC
Confidence 6899999999999999999875 578877 7999999988776421 2466789999887 8
Q ss_pred CcEEEEeccCCC
Q 011654 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 66 ~D~V~i~tp~~~ 77 (344)
T 3euw_A 66 IDGIVIGSPTST 77 (344)
T ss_dssp CCEEEECSCGGG
T ss_pred CCEEEEeCCchh
Confidence 999999988643
No 166
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.37 E-value=2e-06 Score=84.48 Aligned_cols=111 Identities=19% Similarity=0.302 Sum_probs=71.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKI--EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++||+|||+|.||..+|..++.+ |+ +|+++|++++ ..... .++.. ....+++.++|+ +++++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~~-~~g~a-----------~dl~~-~~~~~i~~t~d~-~~l~~ 77 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSEG-TKGAT-----------MDLEI-FNLPNVEISKDL-SASAH 77 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC------CH-----------HHHHH-HTCTTEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCcc-hHHHH-----------HHHhh-hcCCCeEEeCCH-HHHCC
Confidence 47999999999999999999988 77 9999999985 21100 11111 122368888898 56999
Q ss_pred CcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||+||+++..+ .+ + .++ .-+...+++.++.+.++. ++.++++ -|.|...
T Consensus 78 aD~Vi~aag~~-~p-G--~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~sNP~~~ 130 (303)
T 2i6t_A 78 SKVVIFTVNSL-GS-S--QSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV-ASQPVEI 130 (303)
T ss_dssp CSEEEECCCC--------CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE-CSSSHHH
T ss_pred CCEEEEcCCCC-CC-C--CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-cCChHHH
Confidence 99999998654 11 0 000 113344567778888887 5666554 3456554
No 167
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.36 E-value=1.4e-06 Score=87.47 Aligned_cols=71 Identities=17% Similarity=0.280 Sum_probs=57.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+..++++++ ++|+++++.+.+.+. -++...+|+++.++ +
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~------------------~~~~~~~~~~~ll~~~~ 75 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER------------------TGARGHASLTDMLAQTD 75 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH------------------HCCEEESCHHHHHHHCC
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH------------------cCCceeCCHHHHhcCCC
Confidence 68999999999999999998753478865 789999998876642 12467789998876 7
Q ss_pred CcEEEEeccCCC
Q 011654 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 76 ~D~V~i~tp~~~ 87 (354)
T 3q2i_A 76 ADIVILTTPSGL 87 (354)
T ss_dssp CSEEEECSCGGG
T ss_pred CCEEEECCCcHH
Confidence 999999988643
No 168
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.36 E-value=7.9e-07 Score=87.53 Aligned_cols=70 Identities=17% Similarity=0.267 Sum_probs=54.8
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++...+|+++.++++
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~------------------~~~~~~~~~~ll~~~ 67 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-ERFEFVGAFTPNKVKREKICSDY------------------RIMPFDSIESLAKKC 67 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-SSSEEEEEECSCHHHHHHHHHHH------------------TCCBCSCHHHHHTTC
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHHhcC
Confidence 58999999999997 88878764 578877 7999999988776420 122267888888899
Q ss_pred cEEEEeccCCC
Q 011654 80 DIVFVSVNTPT 90 (480)
Q Consensus 80 DvVii~Vptp~ 90 (480)
|+|++|+|+..
T Consensus 68 D~V~i~tp~~~ 78 (308)
T 3uuw_A 68 DCIFLHSSTET 78 (308)
T ss_dssp SEEEECCCGGG
T ss_pred CEEEEeCCcHh
Confidence 99999988643
No 169
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.35 E-value=6.8e-07 Score=77.48 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=69.7
Q ss_pred cEEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGA----GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.||..++.+|.+. |++|+.++.+.+.+ .+..+..++++..+
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i------------------------~G~~~~~s~~el~~ 68 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI------------------------EGLKCYRSVRELPK 68 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE------------------------TTEECBSSGGGSCT
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE------------------------CCeeecCCHHHhCC
Confidence 58999999 99999999999988 99866666542111 13566778888667
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
.+|++++|||. ..+.++++++.+ ...+.+++..||. .+++.+..++.+
T Consensus 69 ~vDlvii~vp~---------------~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~G 116 (138)
T 1y81_A 69 DVDVIVFVVPP---------------KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAG 116 (138)
T ss_dssp TCCEEEECSCH---------------HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHHT
T ss_pred CCCEEEEEeCH---------------HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHCC
Confidence 89999999983 235667776665 4445677765553 466766666654
No 170
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.35 E-value=1.2e-06 Score=87.51 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=56.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|+||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +.....+|+++.++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~ 63 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI-DDAILYAISDVREDRLREMKEKL-----------------GVEKAYKDPHELIEDP 63 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS-TTEEEEEEECSCHHHHHHHHHHH-----------------TCSEEESSHHHHHHCT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHh-----------------CCCceeCCHHHHhcCC
Confidence 36999999999999999999874 578876 6899999888766420 11246788888877
Q ss_pred cCcEEEEeccCC
Q 011654 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 64 ~~D~V~i~tp~~ 75 (344)
T 3ezy_A 64 NVDAVLVCSSTN 75 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCCc
Confidence 799999998864
No 171
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.32 E-value=3.1e-06 Score=83.04 Aligned_cols=95 Identities=16% Similarity=0.242 Sum_probs=70.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|++||+++++.+.+.+.. .......++++.++++|+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g-----------------~~~~~~~~l~~~l~~aDv 218 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMG-----------------LVPFHTDELKEHVKDIDI 218 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT-----------------CEEEEGGGHHHHSTTCSE
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCC-----------------CeEEchhhHHHHhhCCCE
Confidence 5899999999999999999987 899999999998776554310 011112467777889999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++++|... .+ . .....++++.++|+.+..+.++
T Consensus 219 Vi~~~p~~~----------i~----~----~~~~~mk~g~~lin~a~g~~~~ 252 (300)
T 2rir_A 219 CINTIPSMI----------LN----Q----TVLSSMTPKTLILDLASRPGGT 252 (300)
T ss_dssp EEECCSSCC----------BC----H----HHHTTSCTTCEEEECSSTTCSB
T ss_pred EEECCChhh----------hC----H----HHHHhCCCCCEEEEEeCCCCCc
Confidence 999988532 11 1 2345688999999988765554
No 172
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.30 E-value=4.4e-06 Score=73.51 Aligned_cols=40 Identities=23% Similarity=0.219 Sum_probs=36.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 6899999999999999999998 899999999999887665
No 173
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.29 E-value=5.2e-06 Score=82.59 Aligned_cols=116 Identities=16% Similarity=0.245 Sum_probs=78.4
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCC-------eEEEEeCC----HHHHHH----HHCCCCCCCCCChHHHHHhhcCCC
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKI-------EVAVVDIS----VSRIAA----WNGDQLPIYEPGLEDVVTQCRGRN 65 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~-------~V~~~D~~----~~~v~~----l~~~~~~~~e~~l~~l~~~~~~~~ 65 (480)
|||+|+|+ |.+|.+++..|+.+ |+ +|.++|++ +++.+. +.....++ .+.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-------------~~~ 70 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-------------LAG 70 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-------------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-------------cCc
Confidence 79999998 99999999999887 64 89999999 655543 33321111 135
Q ss_pred EEEecCHHHHhccCcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 66 LFFSTDIEKHVAEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 66 l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++.+++..+++++||+||++...|... + .++ .-+...+++.++.+.++..++.++++.| .|.++...
T Consensus 71 i~~~~~~~~al~~aD~Vi~~ag~~~~~-g--~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~ 141 (329)
T 1b8p_A 71 MTAHADPMTAFKDADVALLVGARPRGP-G--MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAY 141 (329)
T ss_dssp EEEESSHHHHTTTCSEEEECCCCCCCT-T--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHH
T ss_pred EEEecCcHHHhCCCCEEEEeCCCCCCC-C--CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHH
Confidence 677889888899999999998876532 1 000 0123445666777777763455565544 67776544
No 174
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.29 E-value=1.6e-06 Score=86.98 Aligned_cols=70 Identities=13% Similarity=0.176 Sum_probs=54.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh--cc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV--AE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~--~~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. ++...+|+++.+ .+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-EKLKLVTCYSRTEDKREKFGKRY------------------NCAGDATMEALLARED 66 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEECSSHHHHHHHHHHH------------------TCCCCSSHHHHHHCSS
T ss_pred ceEEEEccCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHhcCCC
Confidence 4899999999999999998865 578865 7899999888765420 122357888877 56
Q ss_pred CcEEEEeccCCC
Q 011654 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 67 ~D~V~i~tp~~~ 78 (354)
T 3db2_A 67 VEMVIITVPNDK 78 (354)
T ss_dssp CCEEEECSCTTS
T ss_pred CCEEEEeCChHH
Confidence 899999998754
No 175
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.29 E-value=4e-06 Score=81.98 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=68.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEE--ecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFF--STDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~--t~d~~~a~~~a 79 (480)
++|+|||+|.||..+|..+... |.+|+++|+++++.+.+.+- +... ..++++.++++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~l~~~l~~a 214 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEM-------------------GMEPFHISKAAQELRDV 214 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT-------------------TSEEEEGGGHHHHTTTC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHC-------------------CCeecChhhHHHHhcCC
Confidence 5899999999999999999987 89999999999876655431 1122 24567778999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+|++|+|... .+ . .....++++.++|+.+..+.++
T Consensus 215 DvVi~~~p~~~----------i~----~----~~l~~mk~~~~lin~ar~~~~~ 250 (293)
T 3d4o_A 215 DVCINTIPALV----------VT----A----NVLAEMPSHTFVIDLASKPGGT 250 (293)
T ss_dssp SEEEECCSSCC----------BC----H----HHHHHSCTTCEEEECSSTTCSB
T ss_pred CEEEECCChHH----------hC----H----HHHHhcCCCCEEEEecCCCCCC
Confidence 99999987532 11 1 1234578899999988765554
No 176
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.29 E-value=2.7e-06 Score=85.03 Aligned_cols=72 Identities=22% Similarity=0.299 Sum_probs=56.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCC-CEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGR-NLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~-~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||..++..|.++.++++++ ++|+++++.+.+.+.. + .....+|+++.+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~ll~~~ 65 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQY-----------------QLNATVYPNDDSLLADE 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHT-----------------TCCCEEESSHHHHHHCT
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 69999999999999999998433578866 6899999888776421 1 14567899988765
Q ss_pred -CcEEEEeccCCC
Q 011654 79 -ADIVFVSVNTPT 90 (480)
Q Consensus 79 -aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 66 ~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 66 NVDAVLVTSWGPA 78 (344)
T ss_dssp TCCEEEECSCGGG
T ss_pred CCCEEEECCCchh
Confidence 899999988643
No 177
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.28 E-value=1.4e-06 Score=87.31 Aligned_cols=108 Identities=10% Similarity=0.026 Sum_probs=76.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..++..|....+..+|++||+++++.+.+.+.... .++ -.+..+++++++++++|+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~--~~g----------~~~~~~~~~~eav~~aDi 197 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE--YSG----------LTIRRASSVAEAVKGVDI 197 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT--CTT----------CEEEECSSHHHHHTTCSE
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh--ccC----------ceEEEeCCHHHHHhcCCE
Confidence 58999999999999998886533367999999999998887642000 000 124567889998999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHH
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEK 139 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~ 139 (480)
|++|+|++... + ++. ...+++|++|+..+|..|+. +++.+
T Consensus 198 Vi~aTps~~~~--------p-------vl~--~~~l~~G~~V~~vgs~~p~~-~El~~ 237 (350)
T 1x7d_A 198 ITTVTADKAYA--------T-------IIT--PDMLEPGMHLNAVGGDCPGK-TELHA 237 (350)
T ss_dssp EEECCCCSSEE--------E-------EEC--GGGCCTTCEEEECSCCBTTB-EEECH
T ss_pred EEEeccCCCCC--------c-------eec--HHHcCCCCEEEECCCCCCCc-eeeCH
Confidence 99998865211 0 010 24578899999999987773 33433
No 178
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.27 E-value=1.4e-06 Score=83.84 Aligned_cols=103 Identities=18% Similarity=0.144 Sum_probs=72.3
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcEE
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADIV 82 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDvV 82 (480)
+|+|||+|.||.++|..|.+. |++|+++|+++++.+.+.+. . + .. .++++++ +++|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~---------------~--~-~~-~~~~~~~-~~~Div 175 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEE---------------F--G-LR-AVPLEKA-REARLL 175 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH---------------H--T-CE-ECCGGGG-GGCSEE
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHH---------------h--c-cc-hhhHhhc-cCCCEE
Confidence 699999999999999999988 78999999999888776531 0 1 12 3566776 899999
Q ss_pred EEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHh
Q 011654 83 FVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTH 143 (480)
Q Consensus 83 ii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
|+|+|.+... +.. ..+. .+.++++++|++.++.+..+ + +.+.+++
T Consensus 176 i~~tp~~~~~---------~~~---~~l~--~~~l~~g~~viD~~~~p~~t-~-l~~~a~~ 220 (263)
T 2d5c_A 176 VNATRVGLED---------PSA---SPLP--AELFPEEGAAVDLVYRPLWT-R-FLREAKA 220 (263)
T ss_dssp EECSSTTTTC---------TTC---CSSC--GGGSCSSSEEEESCCSSSSC-H-HHHHHHH
T ss_pred EEccCCCCCC---------CCC---CCCC--HHHcCCCCEEEEeecCCccc-H-HHHHHHH
Confidence 9999875422 000 0011 34577899999887765544 3 4444444
No 179
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.25 E-value=2.7e-06 Score=88.02 Aligned_cols=81 Identities=19% Similarity=0.199 Sum_probs=59.5
Q ss_pred cEEEEEcCChh-HHHHHHHHHH--c-CCCCeEEEEeCCH--HHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEecCHHH
Q 011654 2 VKICCIGAGYV-GGPTMAVIAL--K-CPKIEVAVVDISV--SRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFSTDIEK 74 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~--~-~~G~~V~~~D~~~--~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~d~~~ 74 (480)
|||+|||+|.+ |.+++..|+. . .++++|++||+++ ++++.++.- ...++.. ....+++.++|+.+
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~--------~~~~~~~~~~~~~i~~t~D~~e 79 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGAL--------AKRMVEKAGVPIEIHLTLDRRR 79 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHH--------HHHHHhhcCCCcEEEEeCCHHH
Confidence 69999999999 8888888886 2 1257899999999 887775421 0112111 12345788899988
Q ss_pred HhccCcEEEEeccCCC
Q 011654 75 HVAEADIVFVSVNTPT 90 (480)
Q Consensus 75 a~~~aDvVii~Vptp~ 90 (480)
++++||+||+++|.+.
T Consensus 80 al~gAD~VVitagv~~ 95 (450)
T 1s6y_A 80 ALDGADFVTTQFRVGG 95 (450)
T ss_dssp HHTTCSEEEECCCTTH
T ss_pred HhCCCCEEEEcCCCCC
Confidence 8999999999998753
No 180
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.25 E-value=4.2e-06 Score=72.21 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=39.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGD 45 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~ 45 (480)
|++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~ 48 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE 48 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC
Confidence 35799999999999999999998 99999999999999888753
No 181
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.24 E-value=3.4e-06 Score=87.05 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=57.4
Q ss_pred cEEEEEcCChh--HHHHHHHHHHcC--CCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGAGYV--GGPTMAVIALKC--PKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~--G~~lA~~La~~~--~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
|||+|||+|.| |..++..|+... .| +|++||+++++++.++.-...+.. ...++++|+|++++++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~----------~~~~I~~TtD~~eAl~ 74 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGN----------GRWRYEAVSTLKKALS 74 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTT----------SCEEEEEESSHHHHHT
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhc----------cCCeEEEECCHHHHhc
Confidence 59999999996 678888888621 26 999999999887765431111111 1246889999999999
Q ss_pred cCcEEEEeccC
Q 011654 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
+||+||++++.
T Consensus 75 dADfVI~airv 85 (450)
T 3fef_A 75 AADIVIISILP 85 (450)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEecccc
Confidence 99999999973
No 182
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.23 E-value=5.5e-06 Score=82.66 Aligned_cols=71 Identities=15% Similarity=0.248 Sum_probs=54.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|..+.+++++ .++|+++++.+.+.+.. +...+.+|+++.++ +
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~~ 71 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL-----------------GVETTYTNYKDMIDTEN 71 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT-----------------CCSEEESCHHHHHTTSC
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCCC
Confidence 6899999999999999998822247775 57899999887765420 11145678888775 6
Q ss_pred CcEEEEeccCC
Q 011654 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 72 ~D~V~i~tp~~ 82 (346)
T 3cea_A 72 IDAIFIVAPTP 82 (346)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEeCChH
Confidence 99999998854
No 183
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.23 E-value=1.9e-06 Score=85.80 Aligned_cols=71 Identities=8% Similarity=0.079 Sum_probs=55.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. +..+.++|+++.++ +
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-AQAEVRGIASRRLENAQKMAKEL-----------------AIPVAYGSYEELCKDET 67 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-SSEEEEEEBCSSSHHHHHHHHHT-----------------TCCCCBSSHHHHHHCTT
T ss_pred EEEEEECchHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHHc-----------------CCCceeCCHHHHhcCCC
Confidence 5899999999999999999875 477877 6899999887766421 11134678888776 7
Q ss_pred CcEEEEeccCCC
Q 011654 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 68 ~D~V~i~tp~~~ 79 (330)
T 3e9m_A 68 IDIIYIPTYNQG 79 (330)
T ss_dssp CSEEEECCCGGG
T ss_pred CCEEEEcCCCHH
Confidence 999999988643
No 184
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.22 E-value=4.2e-06 Score=72.40 Aligned_cols=71 Identities=15% Similarity=0.256 Sum_probs=52.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCC--CCChHHHHHhhcCCCEEEecCHHH-Hhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIY--EPGLEDVVTQCRGRNLFFSTDIEK-HVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~--e~~l~~l~~~~~~~~l~~t~d~~~-a~~~ 78 (480)
++|.|+|+|.+|..+|..|.+. |++|+++|+|+++++.+.+...... +..-.+. +++ .+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~--------------l~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEI--------------MQLAHLEC 71 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHH--------------HHHTTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHH--------------HHhcCccc
Confidence 4799999999999999999998 9999999999999998875321111 1111111 111 2568
Q ss_pred CcEEEEeccC
Q 011654 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|++|+|+|+
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 9999999875
No 185
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.22 E-value=3.3e-06 Score=83.37 Aligned_cols=67 Identities=21% Similarity=0.275 Sum_probs=52.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. +++++ .++|+++++.+.+.+. +...+|++++++ +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-~~~~~v~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~~ 69 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-PGAALVRLASSNPDNLALVPPG--------------------CVIESDWRSVVSAPE 69 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-TTEEEEEEEESCHHHHTTCCTT--------------------CEEESSTHHHHTCTT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHhh--------------------CcccCCHHHHhhCCC
Confidence 6899999999999999999875 46775 4899999877544321 345678888775 7
Q ss_pred CcEEEEeccCC
Q 011654 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 70 ~D~V~i~tp~~ 80 (315)
T 3c1a_A 70 VEAVIIATPPA 80 (315)
T ss_dssp CCEEEEESCGG
T ss_pred CCEEEEeCChH
Confidence 99999998854
No 186
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.19 E-value=6.1e-06 Score=83.05 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=53.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+...+- ++...+|+++.++ +
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~a~~~-------------------g~~~~~~~~~ll~~~~ 65 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-DNLEVHGVFDILAEKREAAAQK-------------------GLKIYESYEAVLADEK 65 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-TTEEEEEEECSSHHHHHHHHTT-------------------TCCBCSCHHHHHHCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHhc-------------------CCceeCCHHHHhcCCC
Confidence 4799999999999999988765 578876 579999987654331 2345678888776 7
Q ss_pred CcEEEEeccCCC
Q 011654 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
.|+|+||+|+..
T Consensus 66 ~D~V~i~tp~~~ 77 (359)
T 3e18_A 66 VDAVLIATPNDS 77 (359)
T ss_dssp CCEEEECSCGGG
T ss_pred CCEEEEcCCcHH
Confidence 899999988643
No 187
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.18 E-value=5.4e-06 Score=83.17 Aligned_cols=70 Identities=13% Similarity=0.184 Sum_probs=54.5
Q ss_pred cEEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 2 VKICCIGAGYVGG-PTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||. .++..|.+. ++++|+ ++|+++++.+.+.+. -++...+|+++.++
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~~ll~~~ 88 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-PLTEVTAIASRRWDRAKRFTER------------------FGGEPVEGYPALLERD 88 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-TTEEEEEEEESSHHHHHHHHHH------------------HCSEEEESHHHHHTCT
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-CCeEEEEEEcCCHHHHHHHHHH------------------cCCCCcCCHHHHhcCC
Confidence 5899999999998 788888875 578876 789999988876642 02344588888775
Q ss_pred cCcEEEEeccCCC
Q 011654 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 89 ~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 89 DVDAVYVPLPAVL 101 (350)
T ss_dssp TCSEEEECCCGGG
T ss_pred CCCEEEECCCcHH
Confidence 5899999988653
No 188
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.17 E-value=4e-06 Score=84.38 Aligned_cols=72 Identities=19% Similarity=0.290 Sum_probs=56.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCC-CEEEecCHHHHhc--
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGR-NLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~-~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||..++..|....++++++ ++|+++++.+.+.+.. + .....+|+++.++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~ll~~~ 86 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY-----------------AIEAKDYNDYHDLINDK 86 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH-----------------TCCCEEESSHHHHHHCT
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 58999999999999999998433578876 6899999887765420 1 2456788988776
Q ss_pred cCcEEEEeccCCC
Q 011654 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 87 ~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 87 DVEVVIITASNEA 99 (357)
T ss_dssp TCCEEEECSCGGG
T ss_pred CCCEEEEcCCcHH
Confidence 5899999988653
No 189
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.16 E-value=1.1e-06 Score=76.73 Aligned_cols=98 Identities=13% Similarity=0.038 Sum_probs=68.1
Q ss_pred cEEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCH--HHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHH
Q 011654 2 VKICCIGA----GYVGGPTMAVIALKCPKIEVAVVDISV--SRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKH 75 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~--~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a 75 (480)
.+|+|||+ |.||..++.+|.+. |++|+.+|.+. +.+ .++.+..++++.
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~~g~~i------------------------~G~~~~~sl~el 67 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKVAGKTL------------------------LGQQGYATLADV 67 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSSTTSEE------------------------TTEECCSSTTTC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCccccccc------------------------CCeeccCCHHHc
Confidence 47999999 89999999999998 89876666543 111 135666777776
Q ss_pred hccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 76 VAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
...+|++++|+|.+ .+.++++++.+ ...+.+++..||. .+++.+.+++.+
T Consensus 68 ~~~~Dlvii~vp~~---------------~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~G 117 (145)
T 2duw_A 68 PEKVDMVDVFRNSE---------------AAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREAG 117 (145)
T ss_dssp SSCCSEEECCSCST---------------HHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTTT
T ss_pred CCCCCEEEEEeCHH---------------HHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHcC
Confidence 67899999999842 24666766665 3445566654444 466777776654
No 190
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.15 E-value=8.3e-06 Score=82.07 Aligned_cols=70 Identities=11% Similarity=0.142 Sum_probs=54.4
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. ++..|.+. ++.+|+ ++|+++++.+.+.+.. +.....+|+++.+++
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 67 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-QDIRIVAACDSDLERARRVHRFI-----------------SDIPVLDNVPAMLNQV 67 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-TTEEEEEEECSSHHHHGGGGGTS-----------------CSCCEESSHHHHHHHS
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHhc-----------------CCCcccCCHHHHhcCC
Confidence 58999999999985 78888764 578876 7899999988776531 234567889988764
Q ss_pred -CcEEEEeccCC
Q 011654 79 -ADIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|+||+|+.
T Consensus 68 ~vD~V~i~tp~~ 79 (359)
T 3m2t_A 68 PLDAVVMAGPPQ 79 (359)
T ss_dssp CCSEEEECSCHH
T ss_pred CCCEEEEcCCcH
Confidence 59999998854
No 191
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.14 E-value=4.7e-06 Score=82.50 Aligned_cols=71 Identities=23% Similarity=0.259 Sum_probs=50.4
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-cc
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-AE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-~~ 78 (480)
+|||+|||+|.||.. ++..|.+. ++++|+++|+++++.+.+.+.. +.-....+..+.+ .+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~-~~~~l~v~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~ 63 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRY-----------------RVSATCTDYRDVLQYG 63 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHT-----------------TCCCCCSSTTGGGGGC
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHc-----------------CCCccccCHHHHhhcC
Confidence 369999999999984 88888764 4788889999999988776421 0001022333345 68
Q ss_pred CcEEEEeccCC
Q 011654 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 64 ~D~V~i~tp~~ 74 (323)
T 1xea_A 64 VDAVMIHAATD 74 (323)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEECCch
Confidence 99999998854
No 192
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.14 E-value=2.2e-06 Score=85.78 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=67.8
Q ss_pred CcEEEEEcCChhHHHHHHH-HHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAV-IALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~-La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++||+|||+|.||..+... +....++++|+ ++|+++++.+...+ ..+....+|+++.+++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~------------------~~~~~~~~~~~~ll~~ 63 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPI------------------YSHIHFTSDLDEVLND 63 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGG------------------GTTCEEESCTHHHHTC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHh------------------cCCCceECCHHHHhcC
Confidence 4699999999999874444 43333578877 78998775532221 1235677899988765
Q ss_pred --CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC--ccchHHHHHHHHHhc
Q 011654 79 --ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV--PVKTAEAIEKILTHN 144 (480)
Q Consensus 79 --aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv--~~gt~~~l~~~l~~~ 144 (480)
.|+|+||+|+..+. +- +...++.|+.|+++..+ .....+++.+..++.
T Consensus 64 ~~~D~V~i~tp~~~h~--------------~~----~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (345)
T 3f4l_A 64 PDVKLVVVCTHADSHF--------------EY----AKRALEAGKNVLVEKPFTPTLAQAKELFALAKSK 115 (345)
T ss_dssp TTEEEEEECSCGGGHH--------------HH----HHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCChHHHH--------------HH----HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 89999998864321 11 22334457778777533 334444555555554
No 193
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.12 E-value=7.5e-06 Score=81.90 Aligned_cols=108 Identities=16% Similarity=0.178 Sum_probs=70.6
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
|+||||||+|.||.. ++..+.+. ++.+|+ ++|+++++.+.+.+.. +.-++.+|+++.++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~-~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~ell~~ 84 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDA-ENCVVTAIASRDLTRAREMADRF-----------------SVPHAFGSYEEMLAS 84 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC-SSEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHHHHHHC
T ss_pred ccEEEEEcChHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc-----------------CCCeeeCCHHHHhcC
Confidence 679999999999975 45566654 577876 6899999988876420 11246789998775
Q ss_pred -cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC--ccchHHHHHHHHHhc
Q 011654 78 -EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV--PVKTAEAIEKILTHN 144 (480)
Q Consensus 78 -~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv--~~gt~~~l~~~l~~~ 144 (480)
+.|+|+||+|+..+. .-+. ..+..|+-|+++-.+ .....++|.+..++.
T Consensus 85 ~~iDaV~I~tP~~~H~--------------~~~~----~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 136 (350)
T 4had_A 85 DVIDAVYIPLPTSQHI--------------EWSI----KAADAGKHVVCEKPLALKAGDIDAVIAARDRN 136 (350)
T ss_dssp SSCSEEEECSCGGGHH--------------HHHH----HHHHTTCEEEECSCCCSSGGGGHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchhH--------------HHHH----HHHhcCCEEEEeCCcccchhhHHHHHHHHHHc
Confidence 579999998865432 2222 223346667766533 333445555555544
No 194
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.11 E-value=1.5e-05 Score=82.69 Aligned_cols=99 Identities=10% Similarity=0.034 Sum_probs=72.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|++||+++.+....... ++++ .+++++++.||+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~--G~~Viv~d~~~~~~~~a~~~-------------------g~~~-~~l~ell~~aDi 315 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVME-------------------GFNV-VTLDEIVDKGDF 315 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--cCEEEEEeCChhhHHHHHHc-------------------CCEe-cCHHHHHhcCCE
Confidence 5899999999999999999987 99999999999865332221 1233 478888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccc-hHHHHHH
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVK-TAEAIEK 139 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-t~~~l~~ 139 (480)
|++|+.+.. ..+ +...+.++++.+|++.++.++. ..+.+.+
T Consensus 316 Vi~~~~t~~---------lI~--------~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 316 FITCTGNVD---------VIK--------LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp EEECCSSSS---------SBC--------HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred EEECCChhh---------hcC--------HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 999964431 111 2344668999999999887663 4455544
No 195
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.11 E-value=1.4e-05 Score=80.53 Aligned_cols=104 Identities=19% Similarity=0.266 Sum_probs=67.8
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|+++++.+.-. +...+.+|+++.++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 66 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-PGLNLAFVASRDEEKVKRDL--------------------PDVTVIASPEAAVQHP 66 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESCHHHHHTCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCcEECCHHHHhcCC
Confidence 58999999999997 56666553 578876 7899998765211 23467789999877
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC--ccchHHHHHHHHHhc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV--PVKTAEAIEKILTHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv--~~gt~~~l~~~l~~~ 144 (480)
+.|+|+||+|+..+. +- +...+..|+-|+++..+ .....+++.+..++.
T Consensus 67 ~~D~V~i~tp~~~H~--------------~~----~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~ 117 (364)
T 3e82_A 67 DVDLVVIASPNATHA--------------PL----ARLALNAGKHVVVDKPFTLDMQEARELIALAEEK 117 (364)
T ss_dssp TCSEEEECSCGGGHH--------------HH----HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCChHHHH--------------HH----HHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 789999998864321 21 22234456777777633 333344455554443
No 196
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.09 E-value=1.2e-05 Score=69.00 Aligned_cols=41 Identities=27% Similarity=0.426 Sum_probs=37.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
++|.|+|+|.+|..++..|.+. |++|+++|+++++.+.+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~ 47 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYAS 47 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4699999999999999999998 8999999999998877654
No 197
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.09 E-value=5.1e-06 Score=84.33 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=70.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEE--E--------ecC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLF--F--------STD 71 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~--~--------t~d 71 (480)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+-.+.+.-..-..+... . ..+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 4899999999999999999887 899999999999888776522211110000000000000000 0 124
Q ss_pred HHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 72 IEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++++++++|+||.|+..|-.. .+.+ +.++..+.++++.+||+.|.
T Consensus 269 l~e~l~~aDVVI~tvlipg~~-------ap~L-----vt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRP-------APRL-----VTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSC-------CCCC-----BCHHHHTTSCTTCEEEETTG
T ss_pred HHHHhcCCCEEEECCcCCCCC-------CCEE-----ecHHHHhcCCCCCEEEEEeC
Confidence 677889999999997554321 1221 12456677899999998663
No 198
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.08 E-value=6.7e-06 Score=81.22 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=51.0
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++.+++++++...++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~l~~~~ 66 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-SDWTLQGAWSPTRAKALPICESW------------------RIPYADSLSSLAASC 66 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-SSEEEEEEECSSCTTHHHHHHHH------------------TCCBCSSHHHHHTTC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCccCcHHHhhcCC
Confidence 68999999999997 88888753 478876 8999988777655310 112456776644689
Q ss_pred cEEEEeccCC
Q 011654 80 DIVFVSVNTP 89 (480)
Q Consensus 80 DvVii~Vptp 89 (480)
|+|++|+|+.
T Consensus 67 D~V~i~tp~~ 76 (319)
T 1tlt_A 67 DAVFVHSSTA 76 (319)
T ss_dssp SEEEECSCTT
T ss_pred CEEEEeCCch
Confidence 9999998854
No 199
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.08 E-value=5.3e-06 Score=83.54 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=69.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEE---------EecCH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLF---------FSTDI 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~---------~t~d~ 72 (480)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+...+. .. ..+..+ -..++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~-~~--~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDA-AG--EGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC----------------CHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccc-cc--cccchhhhhHHHHhhhHHHH
Confidence 4899999999999999999887 8999999999998887765211111100000 00 000000 01346
Q ss_pred HHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 73 EKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.++++|+||.|+..|... .+.+ +.++..+.++++.+||+.|.
T Consensus 260 ~e~l~~aDIVI~tv~iPg~~-------ap~L-----vt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGRP-------APRL-----VTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHTTCSEEEECCCCTTSC-------CCCC-----BCHHHHHTSCTTCEEEETTG
T ss_pred HHHHhcCCEEEECCCCCCcc-------ccee-----ecHHHHhcCCCCcEEEEEeC
Confidence 67789999999997544211 1111 12456667889999998653
No 200
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.07 E-value=9.9e-06 Score=76.89 Aligned_cols=107 Identities=16% Similarity=0.122 Sum_probs=66.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAV-VDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|+|+|.||..++..+... ++++++ +|++++. . .++..++|+++.+ ++
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~-------------------~gv~v~~dl~~l~-~~ 55 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----T-------------------TPYQQYQHIADVK-GA 55 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC--------------------------CCSCBCSCTTTCT-TC
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----c-------------------CCCceeCCHHHHh-CC
Confidence 68999999999999999999887 447665 7887541 0 1234567777766 89
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCccc
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|++|-+.. | ..+.+.+ . ++.+.-+|+.+| |.+++-.+.+++.. ....++++|.+.
T Consensus 56 DVvIDft~-p-----------------~a~~~~~-~-l~~g~~vVigTT---G~s~e~~~~l~~aa--~~~~v~~a~N~S 110 (243)
T 3qy9_A 56 DVAIDFSN-P-----------------NLLFPLL-D-EDFHLPLVVATT---GEKEKLLNKLDELS--QNMPVFFSANMS 110 (243)
T ss_dssp SEEEECSC-H-----------------HHHHHHH-T-SCCCCCEEECCC---SSHHHHHHHHHHHT--TTSEEEECSSCC
T ss_pred CEEEEeCC-h-----------------HHHHHHH-H-HhcCCceEeCCC---CCCHHHHHHHHHHH--hcCCEEEECCcc
Confidence 99885532 2 1223333 3 666776776665 33333223333332 134677888764
No 201
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.06 E-value=2.3e-05 Score=70.72 Aligned_cols=71 Identities=11% Similarity=0.211 Sum_probs=50.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecC---HHHH--h
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTD---IEKH--V 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d---~~~a--~ 76 (480)
++|.|+|+|.||..+|..|.+.. |++|+++|+++++++.+.+....... +. .++ +.++ +
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~------------gd---~~~~~~l~~~~~~ 103 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVIS------------GD---ATDPDFWERILDT 103 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEE------------CC---TTCHHHHHTBCSC
T ss_pred CcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEE------------cC---CCCHHHHHhccCC
Confidence 47999999999999999998631 68999999999999887753211100 00 012 2232 5
Q ss_pred ccCcEEEEeccC
Q 011654 77 AEADIVFVSVNT 88 (480)
Q Consensus 77 ~~aDvVii~Vpt 88 (480)
.++|+||+|+|.
T Consensus 104 ~~ad~vi~~~~~ 115 (183)
T 3c85_A 104 GHVKLVLLAMPH 115 (183)
T ss_dssp CCCCEEEECCSS
T ss_pred CCCCEEEEeCCC
Confidence 689999999874
No 202
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.06 E-value=1.3e-05 Score=79.34 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=71.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.+|..++..|+...+..+|.+||+++++.+.+.+. + .. ..-.+. .+++++++ ++|+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~-----------~-~~-~~~~~~-~~~~~e~v-~aDv 190 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSY-----------C-ED-RGISAS-VQPAEEAS-RCDV 190 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHH-----------H-HH-TTCCEE-ECCHHHHT-SSSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHH-----------H-Hh-cCceEE-ECCHHHHh-CCCE
Confidence 58999999999999999998743367899999999998887642 0 00 001245 67888888 9999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|+.... .+ ...++++++|+..++..|+.
T Consensus 191 Vi~aTp~~~pv--------~~-----------~~~l~~G~~V~~ig~~~p~~ 223 (322)
T 1omo_A 191 LVTTTPSRKPV--------VK-----------AEWVEEGTHINAIGADGPGK 223 (322)
T ss_dssp EEECCCCSSCC--------BC-----------GGGCCTTCEEEECSCCSTTC
T ss_pred EEEeeCCCCce--------ec-----------HHHcCCCeEEEECCCCCCCc
Confidence 99998853210 01 14578899999887776663
No 203
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.05 E-value=7.1e-06 Score=81.46 Aligned_cols=71 Identities=15% Similarity=0.168 Sum_probs=51.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++.+++ ++|+++++.+.+.+.. +.-+..+|+++.++ +
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-~~~~~~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-GNGEVVAVSSRTLESAQAFANKY-----------------HLPKAYDKLEDMLADES 67 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-CSEEEEEEECSCSSTTCC---CC-----------------CCSCEESCHHHHHTCTT
T ss_pred eEEEEEechHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCCC
Confidence 5899999999999999998875 366655 6799987765544320 11135688888877 7
Q ss_pred CcEEEEeccCCC
Q 011654 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 68 ~D~V~i~tp~~~ 79 (329)
T 3evn_A 68 IDVIYVATINQD 79 (329)
T ss_dssp CCEEEECSCGGG
T ss_pred CCEEEECCCcHH
Confidence 899999988643
No 204
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.05 E-value=1.9e-05 Score=79.46 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=72.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
++||+|||+|.||..++..|... +++++ .++|+++++.+.+.+... + .......+|+++.++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~-~~~~lv~v~d~~~~~~~~~a~~~~-~-------------~~~~~~~~~~~~ll~~~ 70 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANN-Y-------------PESTKIHGSYESLLEDP 70 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTT-C-------------CTTCEEESSHHHHHHCT
T ss_pred ceEEEEECchHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhC-C-------------CCCCeeeCCHHHHhcCC
Confidence 36899999999999999988875 46776 478999998877654210 0 002356788888775
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC--ccchHHHHHHHHHhc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV--PVKTAEAIEKILTHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv--~~gt~~~l~~~l~~~ 144 (480)
++|+|++|+|+..+ .+. +...+..|+.|+++..+ .....++|.+..++.
T Consensus 71 ~~D~V~i~tp~~~h---------------~~~---~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~ 121 (362)
T 1ydw_A 71 EIDALYVPLPTSLH---------------VEW---AIKAAEKGKHILLEKPVAMNVTEFDKIVDACEAN 121 (362)
T ss_dssp TCCEEEECCCGGGH---------------HHH---HHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTT
T ss_pred CCCEEEEcCChHHH---------------HHH---HHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 58999999875432 122 22335567767766532 333344555555554
No 205
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.05 E-value=1.7e-05 Score=82.63 Aligned_cols=91 Identities=15% Similarity=0.055 Sum_probs=68.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|++||+++.+....... +.++ .+++++++.+|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~--G~~V~v~d~~~~~~~~a~~~-------------------G~~~-~~l~ell~~aDi 335 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL--GATVWVTEIDPICALQAAME-------------------GYRV-VTMEYAADKADI 335 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSCHHHHHHHHTT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCChHhHHHHHHc-------------------CCEe-CCHHHHHhcCCE
Confidence 5899999999999999999876 99999999999864222211 1233 468888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCcc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPV 131 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~ 131 (480)
|++++.|.. ..+ +...+.++++.+||+.+..+.
T Consensus 336 Vi~~~~t~~---------lI~--------~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 336 FVTATGNYH---------VIN--------HDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp EEECSSSSC---------SBC--------HHHHHHCCTTEEEEECSSSSC
T ss_pred EEECCCccc---------ccC--------HHHHhhCCCCcEEEEcCCCcc
Confidence 999985431 112 234456899999999887654
No 206
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.04 E-value=3.6e-05 Score=75.61 Aligned_cols=117 Identities=22% Similarity=0.300 Sum_probs=73.0
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCC--eEEEEeC--CHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKI--EVAVVDI--SVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|+| +|.+|.+++..|+.+ |+ ++.++|+ ++++++.... ++.+... .....+++.+..+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~--------dl~~~~~--~~~~~~v~~~~~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAA--------DTNHGIA--YDSNTRVRQGGYEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHH--------HHHHHHT--TTCCCEEEECCGGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHH--------HHHHHHh--hCCCcEEEeCCHHHh
Confidence 7999999 999999999999887 54 7999999 8876543221 1111110 012233332335679
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+++|+||++.+.|... + ....| ...+++.++.+.++. ++.+|++ +|.|.++.-.
T Consensus 69 ~~aDvVi~~ag~~~~~-g---~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv-~SNPv~~~~~ 127 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQP-G---QTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLT-TSNPVDLLNR 127 (303)
T ss_dssp TTCSEEEECCCCCCCT-T---CCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEE-CCSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-eCChHHHHHH
Confidence 9999999999876532 1 00112 234555666666664 4555554 6888876443
No 207
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.04 E-value=1.2e-05 Score=79.75 Aligned_cols=69 Identities=25% Similarity=0.233 Sum_probs=52.1
Q ss_pred cEEEEEcCChhHHHH-HHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 2 VKICCIGAGYVGGPT-MAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~l-A~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|||+|||+|.||..+ +..|.+. +++++ ++|+++++.+.+.+.. +.....+|+++.++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~--~~~~vav~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT--GGEVVSMMSTSAERGAAYATEN-----------------GIGKSVTSVEELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT--TCEEEEEECSCHHHHHHHHHHT-----------------TCSCCBSCHHHHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhhcC--CCeEEEEECCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 699999999999998 7777764 88876 7899999887765420 11123567888775
Q ss_pred cCcEEEEeccCC
Q 011654 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 62 ~~D~V~i~tp~~ 73 (332)
T 2glx_A 62 DVDAVYVSTTNE 73 (332)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChh
Confidence 599999998854
No 208
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.01 E-value=1.3e-05 Score=79.10 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=69.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
.+|+|||+|.||..++..|....+..+|++||++ +.+.+.+. +-... ...+..+ +++++++++|+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~-----------l~~~~-g~~~~~~-~~~eav~~aDI 186 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILER-----------IGRRC-GVPARMA-APADIAAQADI 186 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHH-----------HHHHH-TSCEEEC-CHHHHHHHCSE
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHH-----------HHHhc-CCeEEEe-CHHHHHhhCCE
Confidence 4799999999999999999875446789999999 44444321 00000 1234566 89999999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|... +- +. .+.+++|++|+..++..|+.
T Consensus 187 Vi~aT~s~~----------pv-------l~--~~~l~~G~~V~~vGs~~p~~ 219 (313)
T 3hdj_A 187 VVTATRSTT----------PL-------FA--GQALRAGAFVGAIGSSLPHT 219 (313)
T ss_dssp EEECCCCSS----------CS-------SC--GGGCCTTCEEEECCCSSTTC
T ss_pred EEEccCCCC----------cc-------cC--HHHcCCCcEEEECCCCCCch
Confidence 999987531 11 11 24688999999888877764
No 209
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.00 E-value=4e-05 Score=71.26 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=38.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
|||.|+|+|.+|..+|..|.+. |++|+++|+|+++++.+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHH
Confidence 8999999999999999999998 9999999999999988763
No 210
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=98.00 E-value=3.1e-05 Score=76.26 Aligned_cols=116 Identities=19% Similarity=0.235 Sum_probs=72.7
Q ss_pred cEEEEEc-CChhHHHHHHHHHHc-CCCCeEEEEeCCHH---HHHHHHCCCCCCCCCChHHHHHhhcCCCEEE--ecCHHH
Q 011654 2 VKICCIG-AGYVGGPTMAVIALK-CPKIEVAVVDISVS---RIAAWNGDQLPIYEPGLEDVVTQCRGRNLFF--STDIEK 74 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~-~~G~~V~~~D~~~~---~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~--t~d~~~ 74 (480)
|||+||| +|+||.++|..|+.+ .-..++.++|+++. ....++.. +. .-.++. +++..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~--~~-------------~~~v~~~~~~~~~~ 65 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI--PT-------------AVKIKGFSGEDATP 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS--CS-------------SEEEEEECSSCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC--CC-------------CceEEEecCCCcHH
Confidence 8999999 899999999999874 22468999999861 12222221 00 012332 124445
Q ss_pred HhccCcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 75 HVAEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
++++||+||++.+.|..+. .++ ..+...+++..+.+.++.+ +.++++- |.|..+.-.+
T Consensus 66 ~~~~aDivii~ag~~rkpG---~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvv-tNPvd~~t~~ 127 (312)
T 3hhp_A 66 ALEGADVVLISAGVARKPG---MDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGII-TNPVNTTVAI 127 (312)
T ss_dssp HHTTCSEEEECCSCSCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC-SSCHHHHHHH
T ss_pred HhCCCCEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEe-cCcchhHHHH
Confidence 6999999999998876431 111 1134556667777888765 4445443 5787765444
No 211
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.99 E-value=1.6e-05 Score=79.07 Aligned_cols=72 Identities=17% Similarity=0.257 Sum_probs=53.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC--Ce-EEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK--IE-VAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G--~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
++||+|||+|.||..++..|.+. ++ ++ |.++|+++++.+.+.+.. +.-+..+|+++.++
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~~~~~l~av~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~ 63 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PRSEHQVVAVAARDLSRAKEFAQKH-----------------DIPKAYGSYEELAK 63 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CTTTEEEEEEECSSHHHHHHHHHHH-----------------TCSCEESSHHHHHH
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhc
Confidence 36999999999999999988764 22 35 456899999888776420 11135688888776
Q ss_pred --cCcEEEEeccCCC
Q 011654 78 --EADIVFVSVNTPT 90 (480)
Q Consensus 78 --~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 64 ~~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 64 DPNVEVAYVGTQHPQ 78 (334)
T ss_dssp CTTCCEEEECCCGGG
T ss_pred CCCCCEEEECCCcHH
Confidence 6999999988653
No 212
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.96 E-value=4.1e-05 Score=76.70 Aligned_cols=68 Identities=21% Similarity=0.347 Sum_probs=51.4
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..+.+. ++.+|+ ++|+++++.+ +. .++..+.+|+++.+++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-~~~~l~av~d~~~~~~~---~~-----------------~~~~~~~~~~~~ll~~~ 66 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-PGLELAGVSSSDASKVH---AD-----------------WPAIPVVSDPQMLFNDP 66 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHH---TT-----------------CSSCCEESCHHHHHHCS
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCcEEEEEECCCHHHHH---hh-----------------CCCCceECCHHHHhcCC
Confidence 58999999999997 67667654 578876 7899998775 11 0234567899988764
Q ss_pred -CcEEEEeccCCC
Q 011654 79 -ADIVFVSVNTPT 90 (480)
Q Consensus 79 -aDvVii~Vptp~ 90 (480)
.|+|+||+|+..
T Consensus 67 ~vD~V~i~tp~~~ 79 (352)
T 3kux_A 67 SIDLIVIPTPNDT 79 (352)
T ss_dssp SCCEEEECSCTTT
T ss_pred CCCEEEEeCChHH
Confidence 899999988754
No 213
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.96 E-value=1.5e-05 Score=79.25 Aligned_cols=70 Identities=13% Similarity=0.131 Sum_probs=52.1
Q ss_pred cEEEEEcCChhHH-HHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 2 VKICCIGAGYVGG-PTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.+|. .++..|... +++| .++|+++++.+.+.+.. +...+.+|+++.++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~--~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA--GAELAGVFESDSDNRAKFTSLF-----------------PSVPFAASAEQLITDA 65 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT--TCEEEEEECSCTTSCHHHHHHS-----------------TTCCBCSCHHHHHTCT
T ss_pred cEEEEECCChHHHHHhhhhhcCC--CcEEEEEeCCCHHHHHHHHHhc-----------------CCCcccCCHHHHhhCC
Confidence 6899999999996 677777654 8885 57899998777665421 12345678888775
Q ss_pred cCcEEEEeccCCC
Q 011654 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 66 ~~D~V~i~tp~~~ 78 (336)
T 2p2s_A 66 SIDLIACAVIPCD 78 (336)
T ss_dssp TCCEEEECSCGGG
T ss_pred CCCEEEEeCChhh
Confidence 6899999988643
No 214
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.94 E-value=3.9e-05 Score=77.07 Aligned_cols=68 Identities=10% Similarity=0.208 Sum_probs=50.7
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|+++++...-- +...+.+|+++.++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-DEYQISKIMTSRTEEVKRDF--------------------PDAEVVHELEEITNDP 64 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESSTHHHHTCT
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCceECCHHHHhcCC
Confidence 58999999999997 56666553 578875 6799987643211 23466788888876
Q ss_pred cCcEEEEeccCCC
Q 011654 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 65 ~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 65 AIELVIVTTPSGL 77 (358)
T ss_dssp TCCEEEECSCTTT
T ss_pred CCCEEEEcCCcHH
Confidence 7899999988754
No 215
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.94 E-value=1.6e-05 Score=80.18 Aligned_cols=109 Identities=13% Similarity=0.111 Sum_probs=71.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||+|||+|.||.++|..|++. ++|+++|+++++.+.+.+...... -.+.-..+++++++++|+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~~~~-------------~d~~~~~~l~~ll~~~Dv 80 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATPLK-------------VDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEEEE-------------CCTTCHHHHHHHHTTCSC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCeEE-------------EecCCHHHHHHHHhCCCE
Confidence 5899999999999999999874 799999999999998875310000 000001345667789999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
||.|+|...+ ..+. ...++.++.+++.|+.++.+ +.+.+..++.+
T Consensus 81 VIn~~P~~~~---------------~~v~---~a~l~~G~~~vD~s~~~~~~-~~l~~~Ak~aG 125 (365)
T 2z2v_A 81 VIGALPGFLG---------------FKSI---KAAIKSKVDMVDVSFMPENP-LELRDEAEKAQ 125 (365)
T ss_dssp EEECCCHHHH---------------HHHH---HHHHHTTCCEEECCCCSSCG-GGGHHHHHHTT
T ss_pred EEECCChhhh---------------HHHH---HHHHHhCCeEEEccCCcHHH-HHHHHHHHHcC
Confidence 9999764211 1122 22345678888888765554 44545555543
No 216
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.93 E-value=1.9e-05 Score=80.29 Aligned_cols=71 Identities=8% Similarity=0.140 Sum_probs=55.1
Q ss_pred CcEEEEEcCC-hhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 1 MVKICCIGAG-YVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 1 imkI~VIGlG-~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
++||+|||+| .||..++..|.+. ++.+++ ++|+++++.+.+.+. -++...+|+++.++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~ell~~ 62 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-PDAQIVAACDPNEDVRERFGKE------------------YGIPVFATLAEMMQH 62 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-TTEEEEEEECSCHHHHHHHHHH------------------HTCCEESSHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHH------------------cCCCeECCHHHHHcC
Confidence 3699999999 9999999998875 467766 689999988776542 02345788888776
Q ss_pred -cCcEEEEeccCCC
Q 011654 78 -EADIVFVSVNTPT 90 (480)
Q Consensus 78 -~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 63 ~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 63 VQMDAVYIASPHQF 76 (387)
T ss_dssp SCCSEEEECSCGGG
T ss_pred CCCCEEEEcCCcHH
Confidence 4899999988643
No 217
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.92 E-value=4.5e-05 Score=79.58 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=67.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|+++|+++++.+...+. +... .+++++++.+|+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~-------------------Ga~~-~~l~e~l~~aDv 332 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMME-------------------GFDV-VTVEEAIGDADI 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCEE-ecHHHHHhCCCE
Confidence 4799999999999999999887 89999999999887655431 1222 456777889999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
||+|++++.- .+ .+..+.++++.+|++.+..+
T Consensus 333 Vi~atgt~~~---------i~--------~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 333 VVTATGNKDI---------IM--------LEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp EEECSSSSCS---------BC--------HHHHHHSCTTCEEEECSSSG
T ss_pred EEECCCCHHH---------HH--------HHHHHhcCCCcEEEEeCCCC
Confidence 9999876421 11 13345578899998877644
No 218
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.92 E-value=3.7e-05 Score=75.55 Aligned_cols=88 Identities=17% Similarity=0.324 Sum_probs=54.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+|||+|.||..++..|.+. ++++++ ++|+++++.+. .|. + ....+++.+ ..++|
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-~~~elvav~d~~~~~~~~--~g~-~-----------------~~~~~~l~~-~~~~D 67 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-PDFEIAGIVRRNPAEVPF--ELQ-P-----------------FRVVSDIEQ-LESVD 67 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECC---------CCT-T-----------------SCEESSGGG-SSSCC
T ss_pred CEEEEECChHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHH--cCC-C-----------------cCCHHHHHh-CCCCC
Confidence 5899999999999999999874 578887 68999887654 111 0 112345544 37899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV 129 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+|++|+|+..+ .+.+...++.|..|++++.+
T Consensus 68 vViiatp~~~h------------------~~~~~~al~aG~~Vi~ekP~ 98 (304)
T 3bio_A 68 VALVCSPSREV------------------ERTALEILKKGICTADSFDI 98 (304)
T ss_dssp EEEECSCHHHH------------------HHHHHHHHTTTCEEEECCCC
T ss_pred EEEECCCchhh------------------HHHHHHHHHcCCeEEECCCC
Confidence 99999874321 22233445567878877643
No 219
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.91 E-value=1.4e-05 Score=80.62 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=52.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||.|+|+|.||..+|..|++ .++|+++|++.++++.+++....+.- .+.-..++.+.++++|+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~~-------------d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLKV-------------DASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEEC-------------CTTCHHHHHHHHTTCSE
T ss_pred cEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhccCCcEEE-------------ecCCHHHHHHHHhCCCE
Confidence 899999999999999999976 58999999999999988753211100 00001224556789999
Q ss_pred EEEeccC
Q 011654 82 VFVSVNT 88 (480)
Q Consensus 82 Vii~Vpt 88 (480)
||.|+|.
T Consensus 81 Vi~~~p~ 87 (365)
T 3abi_A 81 VIGALPG 87 (365)
T ss_dssp EEECCCG
T ss_pred EEEecCC
Confidence 9999984
No 220
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.90 E-value=3.1e-05 Score=79.05 Aligned_cols=90 Identities=17% Similarity=0.109 Sum_probs=66.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.+|.++|..|... |.+|+++|+++.+....... +... .+++++++.+|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A~~~-------------------G~~~-~sL~eal~~ADV 269 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQAAME-------------------GYQV-LLVEDVVEEAHI 269 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHHHHh-------------------CCee-cCHHHHHhhCCE
Confidence 4799999999999999999987 99999999998765433321 2232 478899999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
|+++.++..- .+ .+..+.++++.+|++.+-.+
T Consensus 270 Vilt~gt~~i---------I~--------~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 270 FVTTTGNDDI---------IT--------SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp EEECSSCSCS---------BC--------TTTGGGCCTTEEEEECSSSG
T ss_pred EEECCCCcCc---------cC--------HHHHhhcCCCcEEEEeCCCC
Confidence 9987654321 11 12345678999999876443
No 221
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.89 E-value=2.2e-05 Score=76.88 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=73.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|.|||+|.||.+++..|++. |. +|++++|++++.+.+.+..... .+.....+++.+.+.++|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~-------------~~~~~~~~~~~~~~~~aD 206 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDER-------------RSAYFSLAEAETRLAEYD 206 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSS-------------SCCEECHHHHHHTGGGCS
T ss_pred CEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhc-------------cCceeeHHHHHhhhccCC
Confidence 5799999999999999999988 87 9999999999988776421000 001111124555678999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+||.|+|.+...+. ..+.+ . ...++++.+|++.++.|..| + +.+..++.
T Consensus 207 ivIn~t~~~~~~~~----~~~~i---~------~~~l~~~~~v~D~~y~P~~T-~-ll~~A~~~ 255 (297)
T 2egg_A 207 IIINTTSVGMHPRV----EVQPL---S------LERLRPGVIVSDIIYNPLET-K-WLKEAKAR 255 (297)
T ss_dssp EEEECSCTTCSSCC----SCCSS---C------CTTCCTTCEEEECCCSSSSC-H-HHHHHHHT
T ss_pred EEEECCCCCCCCCC----CCCCC---C------HHHcCCCCEEEEcCCCCCCC-H-HHHHHHHC
Confidence 99999987643200 00000 0 13467889999998865544 3 43444443
No 222
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.88 E-value=6.1e-05 Score=77.97 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=54.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEec----CHHHHh
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFST----DIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~----d~~~a~ 76 (480)
+||+|||+|.||...+..|.+. ++.+|+ ++|+++++.+.+.+. +.+..-......+ |+++.+
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-~~~~lvav~d~~~~~~~~~a~~------------~~~~g~~~~~~~~~~~~~~~~ll 87 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-DDVEIVAFADPDPYMVGRAQEI------------LKKNGKKPAKVFGNGNDDYKNML 87 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSCHHHHHHHHHH------------HHHTTCCCCEEECSSTTTHHHHT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHH------------HHhcCCCCCceeccCCCCHHHHh
Confidence 5899999999999999888864 577764 789999988776531 0000001134556 888877
Q ss_pred c--cCcEEEEeccCCC
Q 011654 77 A--EADIVFVSVNTPT 90 (480)
Q Consensus 77 ~--~aDvVii~Vptp~ 90 (480)
+ +.|+|+||+|+..
T Consensus 88 ~~~~vD~V~i~tp~~~ 103 (444)
T 2ixa_A 88 KDKNIDAVFVSSPWEW 103 (444)
T ss_dssp TCTTCCEEEECCCGGG
T ss_pred cCCCCCEEEEcCCcHH
Confidence 6 5899999988643
No 223
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.84 E-value=0.00013 Score=76.06 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=52.9
Q ss_pred cEEEEEcCChhHHHHH--HHHHHc--C--CCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecCHHH
Q 011654 2 VKICCIGAGYVGGPTM--AVIALK--C--PKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTDIEK 74 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA--~~La~~--~--~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d~~~ 74 (480)
|||+|||+|.+|.+.. ..++.. . .+.+++++|+++++.+.... .+..+.... ..-+++.|+|.++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~--------~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYI--------LARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHH--------HHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHH--------HHHHHHHHcCCCeEEEEeCCHHH
Confidence 8999999999987632 223321 1 13579999999998765332 011222221 1235788999999
Q ss_pred HhccCcEEEEecc
Q 011654 75 HVAEADIVFVSVN 87 (480)
Q Consensus 75 a~~~aDvVii~Vp 87 (480)
|+++||+||+++.
T Consensus 73 Al~gAD~Vi~~~g 85 (477)
T 3u95_A 73 AIEGADFIINTAY 85 (477)
T ss_dssp HHTTCSEEEECCC
T ss_pred HhCCCCEEEECcc
Confidence 9999999999973
No 224
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.82 E-value=0.00015 Score=72.11 Aligned_cols=106 Identities=12% Similarity=0.198 Sum_probs=73.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.+|..+|..+..- |.+|++||+.+.... .. ....+ .++++.++.||+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~--~~-------------------~~~~~-~~l~ell~~sDi 197 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDL--KE-------------------KGCVY-TSLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHH--HH-------------------TTCEE-CCHHHHHHHCSE
T ss_pred cEEEEECcchHHHHHHHhhccc--CceeeecCCccchhh--hh-------------------cCcee-cCHHHHHhhCCE
Confidence 4799999999999999999876 999999998643211 11 12232 478888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|.+++|-..... .-.|- +....++++.++|+.|=-+.=..+.|.+.|++.
T Consensus 198 vslh~Plt~~T~-----~li~~--------~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g 247 (334)
T 3kb6_A 198 ISLHVPYTKETH-----HMINE--------ERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTT-----TCBCH--------HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCCCChhhc-----cCcCH--------HHHhhcCCCeEEEecCccccccHHHHHHHHHhC
Confidence 999998532211 12332 233558999999987654443455677777653
No 225
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.81 E-value=6.2e-05 Score=75.00 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=54.9
Q ss_pred cEEEEEcCC-hhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--
Q 011654 2 VKICCIGAG-YVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-- 77 (480)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+| .+|...+..|.+..++.++ .++|+++++.+.+.+.. +...+.+|+++.++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 81 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAVFDSYEELLESG 81 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEEESCHHHHHHSS
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCC
Confidence 589999999 8999999888764246776 57899999888766420 12256788998775
Q ss_pred cCcEEEEeccCCC
Q 011654 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 82 ~vD~V~i~tp~~~ 94 (340)
T 1zh8_A 82 LVDAVDLTLPVEL 94 (340)
T ss_dssp CCSEEEECCCGGG
T ss_pred CCCEEEEeCCchH
Confidence 6899999987643
No 226
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.80 E-value=3e-05 Score=77.88 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=74.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-cCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-EAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-~aD 80 (480)
++|+|+|+|.||..+|..|... |.+|+++|+++++++.+.+. . + .++. +.++.+. +||
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~--GakVvv~D~~~~~l~~~a~~---------------~--g-a~~v-~~~~ll~~~~D 232 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAE---------------E--G-ADAV-APNAIYGVTCD 232 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH---------------H--C-CEEC-CGGGTTTCCCS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHH---------------c--C-CEEE-ChHHHhccCCc
Confidence 5799999999999999999998 99999999999988766541 0 1 1222 2233343 899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcCCCCceeEeeCCcccc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNSREIKYQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+++.|.... ..+.. .++ .+ +..+|.+++..|.+.++..++|++.+ +.+.|..+.
T Consensus 233 Ivip~a~~~----------~I~~~----~~~----~l--g~~iV~e~An~p~t~~ea~~~L~~~G------i~~~Pd~~~ 286 (364)
T 1leh_A 233 IFAPCALGA----------VLNDF----TIP----QL--KAKVIAGSADNQLKDPRHGKYLHELG------IVYAPDYVI 286 (364)
T ss_dssp EEEECSCSC----------CBSTT----HHH----HC--CCSEECCSCSCCBSSHHHHHHHHHHT------CEECCHHHH
T ss_pred EeeccchHH----------HhCHH----HHH----hC--CCcEEEeCCCCCcccHHHHHHHHhCC------CEEecceee
Confidence 999885321 12211 122 23 33456667777777656667777764 456776543
No 227
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.79 E-value=3.4e-05 Score=79.62 Aligned_cols=73 Identities=12% Similarity=0.174 Sum_probs=53.3
Q ss_pred cEEEEEcCChhHH-HHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCC-CCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 2 VKICCIGAGYVGG-PTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQ-LPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~-~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
+||+|||+|.||. .++..|.+. +++++ .++|+++++.+.+.+.. .+ ...+...+|+++.++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~a~~~g~~--------------~~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVD--------------PRKIYDYSNFDKIAKD 148 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCC--------------GGGEECSSSGGGGGGC
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhCCC--------------cccccccCCHHHHhcC
Confidence 6899999999997 888888764 36775 57899999887765421 00 001345678888776
Q ss_pred -cCcEEEEeccCC
Q 011654 78 -EADIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
++|+|+||+|+.
T Consensus 149 ~~vD~V~iatp~~ 161 (433)
T 1h6d_A 149 PKIDAVYIILPNS 161 (433)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEEcCCch
Confidence 789999998864
No 228
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.76 E-value=7.4e-05 Score=76.69 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=52.0
Q ss_pred cEEEEEcCCh---hHHHHHHHHHHcCCCCeEE--EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGY---VGGPTMAVIALKCPKIEVA--VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~La~~~~G~~V~--~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+.+.+.. ++ ...++.+|+++.+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~------g~---------~~~~~~~~~~~ll 101 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD-DHYELVAGALSSTPEKAEASGREL------GL---------DPSRVYSDFKEMA 101 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT-SCEEEEEEECCSSHHHHHHHHHHH------TC---------CGGGBCSCHHHHH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHc------CC---------CcccccCCHHHHH
Confidence 4899999998 999988887765 357775 5799999888766420 00 0013457888877
Q ss_pred cc-------CcEEEEeccCCC
Q 011654 77 AE-------ADIVFVSVNTPT 90 (480)
Q Consensus 77 ~~-------aDvVii~Vptp~ 90 (480)
++ .|+|+||+|+..
T Consensus 102 ~~~~~~~~~vD~V~I~tp~~~ 122 (417)
T 3v5n_A 102 IREAKLKNGIEAVAIVTPNHV 122 (417)
T ss_dssp HHHHHCTTCCSEEEECSCTTS
T ss_pred hcccccCCCCcEEEECCCcHH
Confidence 65 899999988754
No 229
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.76 E-value=4.1e-05 Score=77.36 Aligned_cols=110 Identities=10% Similarity=0.151 Sum_probs=70.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.||+|||+| +|...+..+++...+++++ ++|+++++.+++.+. -++...+|+++.+++.|
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~------------------~gv~~~~~~~~l~~~~D 68 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA------------------FGIPLYTSPEQITGMPD 68 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH------------------TTCCEESSGGGCCSCCS
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH------------------hCCCEECCHHHHhcCCC
Confidence 489999999 6988777776542357776 579999988877652 12445688998888999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+++||+|++.+. . ...+-....+..|+-|+++--+.+...+++.+..++.
T Consensus 69 ~v~i~~p~~~h~---------~-----~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~ 118 (372)
T 4gmf_A 69 IACIVVRSTVAG---------G-----AGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQ 118 (372)
T ss_dssp EEEECCC--CTT---------S-----HHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcccc---------h-----hHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHc
Confidence 999999987642 0 1111122234467777777655333334444444444
No 230
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.74 E-value=0.00017 Score=72.46 Aligned_cols=69 Identities=6% Similarity=0.041 Sum_probs=51.9
Q ss_pred cEEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGG-PTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.+|. .++..+... +.+|+ ++|+++++.+.+.+.. +...+.+|+++.+++
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~--~~~lvav~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~~~ 87 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA--GARLAGFHEKDDALAAEFSAVY-----------------ADARRIATAEEILEDE 87 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHHS-----------------SSCCEESCHHHHHTCT
T ss_pred cEEEEECcCHHHHHHHHHHhhcC--CcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 5899999999995 466666654 88855 6899999988776421 223467889987764
Q ss_pred -CcEEEEeccCC
Q 011654 79 -ADIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|+||+|+.
T Consensus 88 ~vD~V~I~tp~~ 99 (361)
T 3u3x_A 88 NIGLIVSAAVSS 99 (361)
T ss_dssp TCCEEEECCCHH
T ss_pred CCCEEEEeCChH
Confidence 89999998764
No 231
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.74 E-value=4.9e-05 Score=77.46 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=53.2
Q ss_pred cEEEEEcCCh---hHHHHHHHHHHcCCCCeEE--EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGY---VGGPTMAVIALKCPKIEVA--VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~La~~~~G~~V~--~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+.+.+.. ++ ...++.+|+++.+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~------g~---------~~~~~~~~~~~ll 76 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD-NTFVLVAGAFDIDPIRGSAFGEQL------GV---------DSERCYADYLSMF 76 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG-GSEEEEEEECCSSHHHHHHHHHHT------TC---------CGGGBCSSHHHHH
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC-CCeEEEEEEeCCCHHHHHHHHHHh------CC---------CcceeeCCHHHHH
Confidence 4899999999 999999888765 357876 4799999988776421 00 0013467788876
Q ss_pred cc-------CcEEEEeccCCC
Q 011654 77 AE-------ADIVFVSVNTPT 90 (480)
Q Consensus 77 ~~-------aDvVii~Vptp~ 90 (480)
++ .|+|+||+|+..
T Consensus 77 ~~~~~~~~~vD~V~i~tp~~~ 97 (398)
T 3dty_A 77 EQEARRADGIQAVSIATPNGT 97 (398)
T ss_dssp HHHTTCTTCCSEEEEESCGGG
T ss_pred hcccccCCCCCEEEECCCcHH
Confidence 54 899999988654
No 232
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.74 E-value=0.00012 Score=74.63 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=64.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||.|.+|..+|..+... |.+|+++|+++.+...... .++++ .+++++++.+|+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf--Ga~Viv~d~dp~~a~~A~~-------------------~G~~v-v~LeElL~~ADI 305 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA--GARVKVTEVDPICALQAAM-------------------DGFEV-VTLDDAASTADI 305 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHH-------------------TTCEE-CCHHHHGGGCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCcchhhHHHh-------------------cCcee-ccHHHHHhhCCE
Confidence 4799999999999999999887 8999999999875433221 12333 467888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV 129 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
|++|.+++- ..+ ++....++++.+|++.+-.
T Consensus 306 Vv~atgt~~---------lI~--------~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 306 VVTTTGNKD---------VIT--------IDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp EEECCSSSS---------SBC--------HHHHHHSCTTEEEEECSSS
T ss_pred EEECCCCcc---------ccC--------HHHHhcCCCCeEEEEcCCC
Confidence 999876531 112 2334557899999986643
No 233
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.73 E-value=3.4e-05 Score=74.44 Aligned_cols=74 Identities=22% Similarity=0.234 Sum_probs=50.6
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAV-VDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
||||+|+| +|.||..++..+... +++++++ +|++.+... |. ++.++.. . ..++.+++|+++++.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~~~~~----G~------d~gel~g-~-~~gv~v~~dl~~ll~~ 73 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTGSPQL----GQ------DAGAFLG-K-QTGVALTDDIERVCAE 73 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTTCTTT----TS------BTTTTTT-C-CCSCBCBCCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecCcccc----cc------cHHHHhC-C-CCCceecCCHHHHhcC
Confidence 57999999 899999999998875 5888776 688643210 11 0001100 0 1145667899998889
Q ss_pred CcEEEEecc
Q 011654 79 ADIVFVSVN 87 (480)
Q Consensus 79 aDvVii~Vp 87 (480)
+|+||.+++
T Consensus 74 ~DVVIDfT~ 82 (272)
T 4f3y_A 74 ADYLIDFTL 82 (272)
T ss_dssp CSEEEECSC
T ss_pred CCEEEEcCC
Confidence 999999853
No 234
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.71 E-value=6.7e-05 Score=75.43 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=49.9
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..|.+. ++++|+ ++|++++++ .+. -+.....+|+++.+++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~---~~~-----------------~~~~~~~~~~~~ll~~~ 64 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-PHFELYKIVERSKELS---KER-----------------YPQASIVRSFKELTEDP 64 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-TTEEEEEEECSSCCGG---GTT-----------------CTTSEEESCSHHHHTCT
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHH---HHh-----------------CCCCceECCHHHHhcCC
Confidence 58999999999997 66667664 578876 679987652 211 1235677889988765
Q ss_pred -CcEEEEeccCCC
Q 011654 79 -ADIVFVSVNTPT 90 (480)
Q Consensus 79 -aDvVii~Vptp~ 90 (480)
.|+|+||+|+..
T Consensus 65 ~vD~V~i~tp~~~ 77 (362)
T 3fhl_A 65 EIDLIVVNTPDNT 77 (362)
T ss_dssp TCCEEEECSCGGG
T ss_pred CCCEEEEeCChHH
Confidence 899999988643
No 235
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.70 E-value=5.9e-05 Score=76.38 Aligned_cols=97 Identities=21% Similarity=0.296 Sum_probs=66.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC-CCCCCCCCChHHHHHhhcCCCEEE--ecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG-DQLPIYEPGLEDVVTQCRGRNLFF--STDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~l~~~~~~~~l~~--t~d~~~a~~~ 78 (480)
++|+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+ ....+ .... ..++.+.+..
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~~~---------------~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCGRI---------------HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSS---------------EEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCCee---------------EeccCCHHHHHHHHcC
Confidence 4799999999999999999887 8999999999998877654 11110 0000 1234566789
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS 127 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+|+||.|++.|... .+.+ +.+...+.++++.+|++.+
T Consensus 232 aDvVi~~~~~p~~~-------t~~l-----i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAK-------APKL-----VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSC-------CCCC-----BCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCC-------Ccce-----ecHHHHhcCCCCcEEEEEe
Confidence 99999999766421 1111 1233456678889888765
No 236
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.69 E-value=6.8e-05 Score=73.36 Aligned_cols=112 Identities=17% Similarity=0.098 Sum_probs=79.9
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+||+++||.. ....+++.|.++|++|.+||......+ .+ ...+...++
T Consensus 6 ~kIgfIGLG~----------MG~~mA~~L~~~G~~V~v~dr~~~~~~---~l-------------------~~~G~~~~~ 53 (297)
T 4gbj_A 6 EKIAFLGLGN----------LGTPIAEILLEAGYELVVWNRTASKAE---PL-------------------TKLGATVVE 53 (297)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEC-------C---TT-------------------TTTTCEECS
T ss_pred CcEEEEecHH----------HHHHHHHHHHHCCCeEEEEeCCHHHHH---HH-------------------HHcCCeEeC
Confidence 4899999976 999999999999999999997543321 11 123567789
Q ss_pred CHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEecCC
Q 011654 405 DAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSIGKP 468 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG~~ 468 (480)
|+.++++++|+|+++..-+. .++.-...+...+++..+|||+..+.+.. .+++.|+.|..-+..
T Consensus 54 s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVs 124 (297)
T 4gbj_A 54 NAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIF 124 (297)
T ss_dssp SGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcC
Confidence 99999999999999987754 33333345667777777999999887542 344679999766543
No 237
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.68 E-value=0.00016 Score=74.24 Aligned_cols=87 Identities=15% Similarity=0.164 Sum_probs=58.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHC---CC-CCCC-CCChHHHHHhhcCCCEEEecCHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNG---DQ-LPIY-EPGLEDVVTQCRGRNLFFSTDIEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~---~~-~~~~-e~~l~~l~~~~~~~~l~~t~d~~~a 75 (480)
+||||||+|.||..++..+.+. ++.+|. ++|+++++.+...+ |. ..+. .....++-.....+...+++|+++.
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhC-CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 5899999999999999888764 577754 68999998877643 20 1110 0111222111223457789999998
Q ss_pred hc--cCcEEEEeccCC
Q 011654 76 VA--EADIVFVSVNTP 89 (480)
Q Consensus 76 ~~--~aDvVii~Vptp 89 (480)
++ +.|+|++|+|+|
T Consensus 103 L~d~dIDaVviaTp~p 118 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP 118 (446)
T ss_dssp HTCTTCCEEEECSCCH
T ss_pred hcCCCCCEEEEcCCCh
Confidence 76 589999998754
No 238
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.66 E-value=0.00012 Score=74.78 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=53.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcC-------CCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKC-------PKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIE 73 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-------~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~ 73 (480)
+||||||+|.||...+..|.+.. .+.+|+ ++|+++++.+++.+.. +..++.+|++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~-----------------~~~~~y~d~~ 89 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL-----------------GAEKAYGDWR 89 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCeEECCHH
Confidence 48999999999999888887530 134555 6899999988876520 2235678899
Q ss_pred HHhc--cCcEEEEeccCCC
Q 011654 74 KHVA--EADIVFVSVNTPT 90 (480)
Q Consensus 74 ~a~~--~aDvVii~Vptp~ 90 (480)
+.++ +.|+|+||+|+..
T Consensus 90 ~ll~~~~vD~V~I~tp~~~ 108 (412)
T 4gqa_A 90 ELVNDPQVDVVDITSPNHL 108 (412)
T ss_dssp HHHHCTTCCEEEECSCGGG
T ss_pred HHhcCCCCCEEEECCCcHH
Confidence 8775 6799999988654
No 239
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.66 E-value=3.7e-05 Score=74.37 Aligned_cols=98 Identities=22% Similarity=0.233 Sum_probs=66.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|||+|.+|.+++..|++. |. +|++++|++++.+.+.+.. .....+++.+++.++|
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------------~~~~~~~~~~~~~~aD 177 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSLNI------------------NKINLSHAESHLDEFD 177 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCSCC------------------EEECHHHHHHTGGGCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhc------------------ccccHhhHHHHhcCCC
Confidence 4799999999999999999988 87 8999999998776655320 1111234555678999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||-|+|.....+ .+ ..+ -...++++.+|++.++.|..|
T Consensus 178 iVInaTp~Gm~~~-------~~-----~~l--~~~~l~~~~~V~D~vY~P~~T 216 (277)
T 3don_A 178 IIINTTPAGMNGN-------TD-----SVI--SLNRLASHTLVSDIVYNPYKT 216 (277)
T ss_dssp EEEECCC--------------C-----CSS--CCTTCCSSCEEEESCCSSSSC
T ss_pred EEEECccCCCCCC-------Cc-----CCC--CHHHcCCCCEEEEecCCCCCC
Confidence 9999987542210 00 000 024467889999998886665
No 240
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.63 E-value=0.00025 Score=70.66 Aligned_cols=115 Identities=21% Similarity=0.288 Sum_probs=73.7
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcC-CC----CeEEEEeCCHH--HHH----HHHCCCCCCCCCChHHHHHhhcCCCEEEec
Q 011654 3 KICCIGA-GYVGGPTMAVIALKC-PK----IEVAVVDISVS--RIA----AWNGDQLPIYEPGLEDVVTQCRGRNLFFST 70 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~-~G----~~V~~~D~~~~--~v~----~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~ 70 (480)
||+|+|+ |.+|.+++..|+... -| .++.++|+++. .++ .|...-.+. ......++
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~-------------~~~~~~~~ 92 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL-------------LDKVVVTA 92 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTT-------------EEEEEEES
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccC-------------CCcEEEcC
Confidence 8999996 999999999998751 01 27999999763 222 122211111 12356778
Q ss_pred CHHHHhccCcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchH
Q 011654 71 DIEKHVAEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTA 134 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~ 134 (480)
+..+++++||+||++-.-|..+. .++ ..+.+.+++..+.|.++..++.+|++ -|.|..+.
T Consensus 93 ~~~~a~~~advVvi~aG~prkpG---mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~~ 156 (345)
T 4h7p_A 93 DPRVAFDGVAIAIMCGAFPRKAG---MERKDLLEMNARIFKEQGEAIAAVAASDCRVVV-VGNPANTN 156 (345)
T ss_dssp CHHHHTTTCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHH
T ss_pred ChHHHhCCCCEEEECCCCCCCCC---CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEE-eCCCcchH
Confidence 88888999999999987665431 110 11234456666777787777776544 34566553
No 241
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.62 E-value=0.00013 Score=71.74 Aligned_cols=70 Identities=16% Similarity=0.090 Sum_probs=51.1
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh--
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-- 76 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-- 76 (480)
|+||+|||+ |++|...+..+... +.++ .++|+++++. .+.+. .+...+.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDPATNVG-LVDSF-----------------FPEAEFFTEPEAFEAY 62 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESCHHHHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCceeCCHHHHHHH
Confidence 689999999 79999999999886 6664 5689987752 12211 12356677887765
Q ss_pred --------ccCcEEEEeccCCC
Q 011654 77 --------AEADIVFVSVNTPT 90 (480)
Q Consensus 77 --------~~aDvVii~Vptp~ 90 (480)
.+.|+|+||+|+..
T Consensus 63 ~~~l~~~~~~vD~V~I~tP~~~ 84 (312)
T 3o9z_A 63 LEDLRDRGEGVDYLSIASPNHL 84 (312)
T ss_dssp HHHHHHTTCCCSEEEECSCGGG
T ss_pred hhhhcccCCCCcEEEECCCchh
Confidence 57899999988654
No 242
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.62 E-value=0.0011 Score=64.52 Aligned_cols=122 Identities=12% Similarity=0.101 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCC
Q 011654 308 NRFVNRIVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPI 387 (480)
Q Consensus 308 ~~~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
++.+..++..++..+.+++|+|+|+.- -+..+++.|...|++|.+|||.....+...+++
T Consensus 139 e~a~~~~l~~~~~~l~g~~v~IiG~G~----------iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g---------- 198 (293)
T 3d4o_A 139 EGTIMMAIQHTDFTIHGANVAVLGLGR----------VGMSVARKFAALGAKVKVGARESDLLARIAEMG---------- 198 (293)
T ss_dssp HHHHHHHHHHCSSCSTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----------
T ss_pred HHHHHHHHHhcCCCCCCCEEEEEeeCH----------HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC----------
Confidence 444444444455578999999999743 789999999999999999999765432222221
Q ss_pred CCCCCCCCCCCceee--ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCC---CCChHHHhhcCcEE
Q 011654 388 HLQPMSPPASKQVNV--VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRN---ILDVEKLREIGFIV 462 (480)
Q Consensus 388 ~~~~~~~~~~~~~~~--~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~---~~~~~~~~~~g~~y 462 (480)
... .+++++.++++|+|+++++...+ +. ...+.|++.+++||.-+ -.+.+..+..|..+
T Consensus 199 ------------~~~~~~~~l~~~l~~aDvVi~~~p~~~i---~~-~~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~ 262 (293)
T 3d4o_A 199 ------------MEPFHISKAAQELRDVDVCINTIPALVV---TA-NVLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKA 262 (293)
T ss_dssp ------------SEEEEGGGHHHHTTTCSEEEECCSSCCB---CH-HHHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEE
T ss_pred ------------CeecChhhHHHHhcCCCEEEECCChHHh---CH-HHHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEE
Confidence 122 24678889999999999987543 33 34567888889999874 23445556678887
Q ss_pred EEe
Q 011654 463 YSI 465 (480)
Q Consensus 463 ~~i 465 (480)
+.+
T Consensus 263 ~~~ 265 (293)
T 3d4o_A 263 LLV 265 (293)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 243
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.62 E-value=0.00026 Score=72.07 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=64.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++.+....... ++. ..+++++++.+|+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~~~-------------------G~~-v~~Leeal~~ADI 278 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQACMD-------------------GFR-LVKLNEVIRQVDI 278 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCE-ECCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHHHc-------------------CCE-eccHHHHHhcCCE
Confidence 4799999999999999999887 89999999998754432221 122 2467888999999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV 129 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
|++|..++. ..+ .+....++++.+|++.+-.
T Consensus 279 Vi~atgt~~---------lI~--------~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 279 VITCTGNKN---------VVT--------REHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp EEECSSCSC---------SBC--------HHHHHHSCTTEEEEECSST
T ss_pred EEECCCCcc---------cCC--------HHHHHhcCCCcEEEEecCC
Confidence 999844321 112 1233557889999886643
No 244
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.61 E-value=7.8e-05 Score=71.19 Aligned_cols=67 Identities=16% Similarity=0.279 Sum_probs=54.1
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+|.|||+|.||.+++..|++. |. +|++++|++++.+.+.+.. +....+++.++++++|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~------------------~~~~~~~~~~~~~~aDi 169 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPV------------------KIFSLDQLDEVVKKAKS 169 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSC------------------EEEEGGGHHHHHHTCSE
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHc------------------ccCCHHHHHhhhcCCCE
Confidence 689999999999999999998 87 8999999999988776521 11233556677889999
Q ss_pred EEEeccCC
Q 011654 82 VFVSVNTP 89 (480)
Q Consensus 82 Vii~Vptp 89 (480)
||.|+|..
T Consensus 170 VInatp~g 177 (253)
T 3u62_A 170 LFNTTSVG 177 (253)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99998754
No 245
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.60 E-value=0.00033 Score=69.58 Aligned_cols=114 Identities=14% Similarity=0.270 Sum_probs=73.7
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCC--e-----EEEEeCCH--HHHH----HHHCCCCCCCCCChHHHHHhhcCCCEE
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKI--E-----VAVVDISV--SRIA----AWNGDQLPIYEPGLEDVVTQCRGRNLF 67 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~-----V~~~D~~~--~~v~----~l~~~~~~~~e~~l~~l~~~~~~~~l~ 67 (480)
|||+|+| +|.+|.++|..|+.+ |. + +.++|+++ ++.+ .|.....++ ...+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-------------~~~~~ 68 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-------------LKDVI 68 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-------------EEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-------------cCCEE
Confidence 7999999 799999999999876 44 5 99999974 2332 233221111 02356
Q ss_pred EecCHHHHhccCcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 68 FSTDIEKHVAEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
.+++..+++++||+||++-..|... |.+ +.| ...+++..+.+.++.+++..+++ -|.|..+.-
T Consensus 69 ~~~~~~~~~~daDvVvitAg~prkp---G~t-R~dll~~N~~i~~~i~~~i~~~~~~~~~viv-vsNPvd~~t 136 (333)
T 5mdh_A 69 ATDKEEIAFKDLDVAILVGSMPRRD---GME-RKDLLKANVKIFKCQGAALDKYAKKSVKVIV-VGNPANTNC 136 (333)
T ss_dssp EESCHHHHTTTCSEEEECCSCCCCT---TCC-TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHH
T ss_pred EcCCcHHHhCCCCEEEEeCCCCCCC---CCC-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-cCCchHHHH
Confidence 6777777799999999997665432 111 223 45566677777777766643433 356766543
No 246
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.60 E-value=0.00015 Score=71.69 Aligned_cols=70 Identities=24% Similarity=0.184 Sum_probs=50.8
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh--
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIE-VAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-- 76 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-- 76 (480)
|+||+|||+ |++|...+..|... +.+ |.++|+++++. .+.+. .+...+.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDINDSVG-IIDSI-----------------SPQSEFFTEFEFFLDH 62 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESSHHHHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCcEECCHHHHHHh
Confidence 689999999 79999999999886 666 45689887642 22211 12356677887755
Q ss_pred ---------ccCcEEEEeccCCC
Q 011654 77 ---------AEADIVFVSVNTPT 90 (480)
Q Consensus 77 ---------~~aDvVii~Vptp~ 90 (480)
.+.|+|+||+|+..
T Consensus 63 ~~~l~~~~~~~vD~V~I~tP~~~ 85 (318)
T 3oa2_A 63 ASNLKRDSATALDYVSICSPNYL 85 (318)
T ss_dssp HHHHTTSTTTSCCEEEECSCGGG
T ss_pred hhhhhhccCCCCcEEEECCCcHH
Confidence 47899999988654
No 247
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.59 E-value=0.00017 Score=72.23 Aligned_cols=101 Identities=9% Similarity=0.126 Sum_probs=76.0
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+|||....+. ... .+
T Consensus 156 ~~l~g~tvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~----------------------~g 202 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGK----------IGQLVAGYGRAFGMNVLVWGRENSKER-ARA----------------------DG 202 (352)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSHHHHHH-HHH----------------------TT
T ss_pred ccCCCCEEEEEeECH----------HHHHHHHHHHhCCCEEEEECCCCCHHH-HHh----------------------cC
Confidence 357899999999854 789999999999999999999753322 111 23
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+++.++++++++++|+|+++++-. +-+.+--....+.|++.+++||+.+ +.+.+
T Consensus 203 ~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~ 259 (352)
T 3gg9_A 203 FAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEEN 259 (352)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTT
T ss_pred ceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHH
Confidence 456678999999999999998763 4444333566788998889999975 45543
No 248
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.58 E-value=0.00029 Score=70.39 Aligned_cols=71 Identities=15% Similarity=0.345 Sum_probs=47.8
Q ss_pred cEEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGGP-TMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++ +.+.+.+ +....+....+|+++.+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~--~~~~~a~---------------~~~~~~~~~~~~~~~ll~~~ 64 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-ETLEVKTIFDLH--VNEKAAA---------------PFKEKGVNFTADLNELLTDP 64 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECTT--CCHHHHH---------------HHHTTTCEEESCTHHHHSCT
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-CCeEEEEEECCC--HHHHHHH---------------hhCCCCCeEECCHHHHhcCC
Confidence 59999999999984 55556553 578876 67887 2222221 0001235677899988764
Q ss_pred -CcEEEEeccCCC
Q 011654 79 -ADIVFVSVNTPT 90 (480)
Q Consensus 79 -aDvVii~Vptp~ 90 (480)
.|+|++|+|+..
T Consensus 65 ~~D~V~i~tp~~~ 77 (349)
T 3i23_A 65 EIELITICTPAHT 77 (349)
T ss_dssp TCCEEEECSCGGG
T ss_pred CCCEEEEeCCcHH
Confidence 899999988643
No 249
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.58 E-value=8.4e-05 Score=73.49 Aligned_cols=65 Identities=18% Similarity=0.486 Sum_probs=48.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+|||+|.||..++..+.+. ++.++ .++|+++++ .+. -++..++|+++.+.++|
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-~~~elvav~d~~~~~--~~~--------------------~gv~~~~d~~~ll~~~D 60 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATL--DTK--------------------TPVFDVADVDKHADDVD 60 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCC--SSS--------------------SCEEEGGGGGGTTTTCS
T ss_pred CEEEEEeecHHHHHHHHHHhcC-CCCEEEEEEcCCHHH--hhc--------------------CCCceeCCHHHHhcCCC
Confidence 6899999999999999988865 46675 578987543 111 02556677777667899
Q ss_pred EEEEeccCC
Q 011654 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+|++|+|+.
T Consensus 61 vViiatp~~ 69 (320)
T 1f06_A 61 VLFLCMGSA 69 (320)
T ss_dssp EEEECSCTT
T ss_pred EEEEcCCcH
Confidence 999998753
No 250
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.57 E-value=0.00033 Score=70.06 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=78.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+||+.....+...++ +
T Consensus 160 ~~l~gktvGIIG~G~----------IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~----------------------g 207 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGR----------IGKLLLQRLKPFGCNLLYHDRLQMAPELEKET----------------------G 207 (351)
T ss_dssp CCSTTCEEEEECCSH----------HHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH----------------------C
T ss_pred ccccCCEEeEEEeCH----------HHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC----------------------C
Confidence 357899999999854 78999999999999999999976443333322 2
Q ss_pred eeeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
+.+.+++++.++.+|+|+++++. ++-+++=-.+..+.|++.++|||+.+ +.|.+.+
T Consensus 208 ~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL 266 (351)
T 3jtm_A 208 AKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAV 266 (351)
T ss_dssp CEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred CeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHH
Confidence 34567899999999999999986 45555433566688998889999875 5565443
No 251
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.57 E-value=0.00021 Score=74.64 Aligned_cols=73 Identities=12% Similarity=0.213 Sum_probs=55.1
Q ss_pred cEEEEEcC----ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGA----GYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+ |.||..++..|.+..++++|+ ++|+++++.+.+.+.. + ....++.+|+++.+
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~------g---------~~~~~~~~d~~ell 104 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL------Q---------LKHATGFDSLESFA 104 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT------T---------CTTCEEESCHHHHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------C---------CCcceeeCCHHHHh
Confidence 58999999 999999999998742477765 7899999888766421 0 01234678898877
Q ss_pred c--cCcEEEEeccCC
Q 011654 77 A--EADIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|+||+|+.
T Consensus 105 ~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 105 QYKDIDMIVVSVKVP 119 (479)
T ss_dssp HCTTCSEEEECSCHH
T ss_pred cCCCCCEEEEcCCcH
Confidence 5 689999998854
No 252
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.56 E-value=0.00017 Score=72.93 Aligned_cols=72 Identities=17% Similarity=0.270 Sum_probs=52.1
Q ss_pred cEEEEEc-CChhHHH-HH----HHHHHcCCCCeE----------EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCC
Q 011654 2 VKICCIG-AGYVGGP-TM----AVIALKCPKIEV----------AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRN 65 (480)
Q Consensus 2 mkI~VIG-lG~~G~~-lA----~~La~~~~G~~V----------~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~ 65 (480)
+||+||| +|.||.. .+ ..+.+. ++..+ .++|+++++.+.+.+.. +.
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~-~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~-----------------~~ 68 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GGVRLKNGDRIMPDPILVGRSAEKVEALAKRF-----------------NI 68 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH-TSEECTTSCEEEEEEEEECSSSHHHHHHHHHT-----------------TC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc-CceeecCCcccceeeEEEcCCHHHHHHHHHHh-----------------CC
Confidence 5899999 9999998 66 666655 23333 38999999988776421 11
Q ss_pred EEEecCHHHHhcc--CcEEEEeccCCCC
Q 011654 66 LFFSTDIEKHVAE--ADIVFVSVNTPTK 91 (480)
Q Consensus 66 l~~t~d~~~a~~~--aDvVii~Vptp~~ 91 (480)
-.+++|+++.+++ .|+|+||+|+..+
T Consensus 69 ~~~~~~~~~ll~~~~iD~V~i~tp~~~h 96 (383)
T 3oqb_A 69 ARWTTDLDAALADKNDTMFFDAATTQAR 96 (383)
T ss_dssp CCEESCHHHHHHCSSCCEEEECSCSSSS
T ss_pred CcccCCHHHHhcCCCCCEEEECCCchHH
Confidence 1356888887754 8999999887543
No 253
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.54 E-value=0.00036 Score=69.54 Aligned_cols=102 Identities=9% Similarity=0.059 Sum_probs=77.7
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+|||.....+... +
T Consensus 169 ~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~------------------------g 214 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGR----------IGRAIATRARGFGLAIHYHNRTRLSHALEE------------------------G 214 (345)
T ss_dssp CCCTTCEEEEESCSH----------HHHHHHHHHHTTTCEEEEECSSCCCHHHHT------------------------T
T ss_pred cccCCCEEEEEEeCh----------hHHHHHHHHHHCCCEEEEECCCCcchhhhc------------------------C
Confidence 467899999999854 789999999999999999999864432211 2
Q ss_pred eeeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
..+.+++++.++++|+|+++++. ++-+.+=-.+....|++.+++||+.+ ++|.+.+
T Consensus 215 ~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL 273 (345)
T 4g2n_A 215 AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDAL 273 (345)
T ss_dssp CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHH
Confidence 45567899999999999999986 34444323566688998889999865 6665543
No 254
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.53 E-value=7.6e-05 Score=75.32 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=64.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC-CCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG-DQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|+|+|.+|..+|..+... |++|+++|+++++.+.+.+ ....+. ....-..++++.+.++|
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~-------------~~~~~~~~l~~~~~~~D 231 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVI-------------TLTATEANIKKSVQHAD 231 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEE-------------EEECCHHHHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEE-------------EecCCHHHHHHHHhCCC
Confidence 5899999999999999999987 8999999999998877653 111000 00000123456678999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV 129 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+||.|++.+... .+. -..+...+.++++.+||+.|..
T Consensus 232 vVi~~~g~~~~~-------~~~-----li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 232 LLIGAVLVPGAK-------APK-----LVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp EEEECCC--------------C-----CSCHHHHTTSCTTCEEEECC--
T ss_pred EEEECCCCCccc-------cch-----hHHHHHHHhhcCCCEEEEEecC
Confidence 999999864210 000 0123445667788888876643
No 255
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.52 E-value=0.0007 Score=66.60 Aligned_cols=121 Identities=21% Similarity=0.368 Sum_probs=70.6
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHCCCCCCCCCChHHHHHhh-cCCCEEEecC-HHHHh
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDI--SVSRIAAWNGDQLPIYEPGLEDVVTQC-RGRNLFFSTD-IEKHV 76 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~l~~~~-~~~~l~~t~d-~~~a~ 76 (480)
|||+|+|+ |.+|.+++..|+.+....++.++|+ ++++.+..... +....... ....++.++| +.+++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~d--------l~~~~~~~~~~~~i~~~~d~l~~al 72 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRED--------IYDALAGTRSDANIYVESDENLRII 72 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHH--------HHHHHTTSCCCCEEEEEETTCGGGG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHH--------HHHhHHhcCCCeEEEeCCcchHHHh
Confidence 79999999 9999999999987621247999999 87655431110 00000000 0113444343 56679
Q ss_pred ccCcEEEEeccCCCCcCCCCCCC----CCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+++|+||++...|... + ..+ ..+...+++.++.+.++. +.+|++ +|.|..+.-.
T Consensus 73 ~gaD~Vi~~Ag~~~~~-g--~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv-~SNPv~~~t~ 130 (313)
T 1hye_A 73 DESDVVIITSGVPRKE-G--MSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV-ITNPVDVMTY 130 (313)
T ss_dssp TTCSEEEECCSCCCCT-T--CCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE-CSSSHHHHHH
T ss_pred CCCCEEEECCCCCCCC-C--CcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE-ecCcHHHHHH
Confidence 9999999998765432 1 000 112233455556666665 444444 5678776533
No 256
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.51 E-value=7.7e-05 Score=76.40 Aligned_cols=71 Identities=15% Similarity=0.309 Sum_probs=53.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCC--CCChHHHHHhhcCCCEEEecCHHHH-hcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIY--EPGLEDVVTQCRGRNLFFSTDIEKH-VAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~--e~~l~~l~~~~~~~~l~~t~d~~~a-~~~ 78 (480)
|+|.|+|+|.+|..+|..|.+. |++|+++|.|+++++.+++...++. +..-.+. +.++ +.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~--------------L~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDL--------------LESAGAAK 68 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHH--------------HHHTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHH--------------HHhcCCCc
Confidence 6799999999999999999998 9999999999999999886433221 1111111 1222 578
Q ss_pred CcEEEEeccC
Q 011654 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|+||+|++.
T Consensus 69 A~~viv~~~~ 78 (413)
T 3l9w_A 69 AEVLINAIDD 78 (413)
T ss_dssp CSEEEECCSS
T ss_pred cCEEEECCCC
Confidence 9999999864
No 257
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.49 E-value=0.00023 Score=62.06 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=34.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC-HHHHHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDIS-VSRIAAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~-~~~v~~l~ 43 (480)
++|.|+|+|.+|..++..|.+. |++|+++|++ +++.+.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~ 44 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLE 44 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHH
Confidence 4799999999999999999998 9999999998 56555554
No 258
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.49 E-value=0.00051 Score=68.93 Aligned_cols=101 Identities=18% Similarity=0.270 Sum_probs=74.9
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+|||....+.. ... +
T Consensus 172 ~~l~gktvGIIGlG~----------IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~----------------------g 218 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGD----------LGKALRRVLSGFRARIRVFDPWLPRSML-EEN----------------------G 218 (365)
T ss_dssp CCSSSSEEEEECCSH----------HHHHHHHHHTTSCCEEEEECSSSCHHHH-HHT----------------------T
T ss_pred cccCCCEEEEecCCc----------ccHHHHHhhhhCCCEEEEECCCCCHHHH-hhc----------------------C
Confidence 457899999999854 7899999999999999999999654432 221 2
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+.+ .++++.++.+|+|++++.-. +-+.+--....+.|++.+++||+.+ ++|.+.
T Consensus 219 ~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~a 275 (365)
T 4hy3_A 219 VEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDA 275 (365)
T ss_dssp CEE-CCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHH
T ss_pred eee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHH
Confidence 233 58999999999999988764 4444333566788998889999974 666543
No 259
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.49 E-value=0.00025 Score=72.28 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=36.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
.+|+|||+|.+|..++..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 4799999999999999988877 8899999999988776653
No 260
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.48 E-value=0.00022 Score=73.67 Aligned_cols=73 Identities=11% Similarity=0.169 Sum_probs=54.8
Q ss_pred cEEEEEcC----ChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGA----GYVGGPTMAVIALKCPKIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+ |.||..++..|.+..++++| .++|+++++.+.+.+.. + ....+..+|+++.+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~------g---------~~~~~~~~~~~~ll 85 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRL------K---------LSNATAFPTLESFA 85 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT------T---------CTTCEEESSHHHHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------C---------CCcceeeCCHHHHh
Confidence 58999999 99999999999864247776 57899999887766420 0 01234678898877
Q ss_pred c--cCcEEEEeccCC
Q 011654 77 A--EADIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|+||+|+.
T Consensus 86 ~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 86 SSSTIDMIVIAIQVA 100 (438)
T ss_dssp HCSSCSEEEECSCHH
T ss_pred cCCCCCEEEEeCCcH
Confidence 5 689999998754
No 261
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.45 E-value=0.00018 Score=72.40 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=52.0
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCC-------Ce-EEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHH
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPK-------IE-VAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEK 74 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G-------~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~ 74 (480)
||||||+|.||...+..+... |+ .+ |.++|+++++.+.+.+.. +.-++.+|+++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~-----------------g~~~~~~d~~~ 69 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKL-----------------GWSTTETDWRT 69 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESCHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHH
Confidence 689999999999888877653 11 24 446899999988776420 12256789998
Q ss_pred Hhc--cCcEEEEeccCCCC
Q 011654 75 HVA--EADIVFVSVNTPTK 91 (480)
Q Consensus 75 a~~--~aDvVii~Vptp~~ 91 (480)
.++ +.|+|+||+|+..+
T Consensus 70 ll~~~~iDaV~I~tP~~~H 88 (390)
T 4h3v_A 70 LLERDDVQLVDVCTPGDSH 88 (390)
T ss_dssp HTTCTTCSEEEECSCGGGH
T ss_pred HhcCCCCCEEEEeCChHHH
Confidence 775 57999999886543
No 262
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.44 E-value=0.00043 Score=69.48 Aligned_cols=112 Identities=14% Similarity=0.192 Sum_probs=83.5
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+..+|+|+|+.. ....++..|.+.|.+|.+||......+.... .++..
T Consensus 21 ~~mkIgiIGlG~----------mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----------------------~g~~~ 68 (358)
T 4e21_A 21 QSMQIGMIGLGR----------MGADMVRRLRKGGHECVVYDLNVNAVQALER----------------------EGIAG 68 (358)
T ss_dssp -CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----------------------TTCBC
T ss_pred cCCEEEEECchH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------CCCEE
Confidence 457999999976 8899999999999999999986443222211 23556
Q ss_pred ecCHHHhcccc---cEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEecC
Q 011654 403 VWDAYQAAKDA---HGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSIGK 467 (480)
Q Consensus 403 ~~~~~~a~~~a---d~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG~ 467 (480)
.++++++++++ |+|++++..+..++ -.+.+...+++..+|||+.+..... .+.+.|+.|...+.
T Consensus 69 ~~s~~e~~~~a~~~DvVi~~vp~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 69 ARSIEEFCAKLVKPRVVWLMVPAAVVDS-MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp CSSHHHHHHHSCSSCEEEECSCGGGHHH-HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred eCCHHHHHhcCCCCCEEEEeCCHHHHHH-HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCC
Confidence 77899999999 99999998885443 2356777777777999999988532 34456888887654
No 263
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.44 E-value=0.00061 Score=69.68 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=51.8
Q ss_pred CcEEEEEcCChhHHHH--HHHHHH--c-CCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHH
Q 011654 1 MVKICCIGAGYVGGPT--MAVIAL--K-CPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKH 75 (480)
Q Consensus 1 imkI~VIGlG~~G~~l--A~~La~--~-~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+|.+ .+. +..|+. . .++.+|+++|+++++++.... +...+... .-+++.++|+.++
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~---------~~~~~~~~-~~~v~~t~d~~~a 70 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD---------FVKRLVKD-RFKVLISDTFEGA 70 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH---------HHHHHHTT-SSEEEECSSHHHH
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH---------HHHHHhhC-CeEEEEeCCHHHH
Confidence 589999999996 332 223454 3 136789999999998775331 11111000 1356777898788
Q ss_pred hccCcEEEEeccCC
Q 011654 76 VAEADIVFVSVNTP 89 (480)
Q Consensus 76 ~~~aDvVii~Vptp 89 (480)
+++||+||++...+
T Consensus 71 l~~AD~Viitagvg 84 (417)
T 1up7_A 71 VVDAKYVIFQFRPG 84 (417)
T ss_dssp HTTCSEEEECCCTT
T ss_pred hCCCCEEEEcCCCC
Confidence 99999999998654
No 264
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.42 E-value=9.1e-05 Score=71.54 Aligned_cols=73 Identities=10% Similarity=0.136 Sum_probs=47.6
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|+|+ |.||..++..+... ++++++ ++|++++... +..--...++ ...++..++|+++++.++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-~~~elva~~d~~~~~~~----g~d~~~~~g~-------~~~~v~~~~dl~~~l~~~ 73 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLL----GSDAGELAGA-------GKTGVTVQSSLDAVKDDF 73 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTC----SCCTTCSSSS-------SCCSCCEESCSTTTTTSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCchhhh----hhhHHHHcCC-------CcCCceecCCHHHHhcCC
Confidence 79999998 99999999988764 588877 6787654211 1000000000 012345677888777899
Q ss_pred cEEEEec
Q 011654 80 DIVFVSV 86 (480)
Q Consensus 80 DvVii~V 86 (480)
|+||-+.
T Consensus 74 DvVIDft 80 (273)
T 1dih_A 74 DVFIDFT 80 (273)
T ss_dssp SEEEECS
T ss_pred CEEEEcC
Confidence 9999554
No 265
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.41 E-value=0.00068 Score=67.74 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=78.2
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHH-hCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLL-GDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPAS 397 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~-~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+..+.+++|+|+|+.. ....+++.|. ..|.+|.+||+.....+...++
T Consensus 158 ~~~l~g~~vgIIG~G~----------IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~--------------------- 206 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGA----------IQKEIARKAVHGLGMKLVYYDVAPADAETEKAL--------------------- 206 (348)
T ss_dssp CCCSTTCEEEEECCSH----------HHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH---------------------
T ss_pred CcCCCCCEEEEEEECH----------HHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc---------------------
Confidence 3467899999999865 8899999999 9999999999986543322222
Q ss_pred CceeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCC--CChHHH
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNI--LDVEKL 455 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~--~~~~~~ 455 (480)
++.+.+++++.++++|+|++++... +.+.+=-.++...|++.++|+|+.+. .+.+.+
T Consensus 207 -g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL 266 (348)
T 2w2k_A 207 -GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDAL 266 (348)
T ss_dssp -TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred -CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHH
Confidence 2344567889999999999999874 35554324566789888899998775 554433
No 266
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.41 E-value=0.0019 Score=59.40 Aligned_cols=71 Identities=21% Similarity=0.196 Sum_probs=52.0
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.|+ |.+|..++..|+++ |++|++++|++++.+.+......+..-++. +...+++.++|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~--------------d~~~~~~~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEPL--------------VLTEADLDSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCGG--------------GCCHHHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEecccc--------------cccHhhcccCC
Confidence 79999997 99999999999998 999999999999887765422111111110 00014578999
Q ss_pred EEEEeccC
Q 011654 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 65 ~vi~~ag~ 72 (224)
T 3h2s_A 65 AVVDALSV 72 (224)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999865
No 267
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.41 E-value=0.00053 Score=67.97 Aligned_cols=102 Identities=12% Similarity=0.175 Sum_probs=75.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .....+++.|...|.+|.+|||.....+....++
T Consensus 141 ~~l~g~tvGIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g---------------------- 188 (330)
T 4e5n_A 141 TGLDNATVGFLGMG----------AIGLAMADRLQGWGATLQYHEAKALDTQTEQRLG---------------------- 188 (330)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHT----------------------
T ss_pred CccCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcC----------------------
Confidence 35789999999985 4789999999999999999999873333222222
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+.+ .++++.++.+|+|++++... +.+.+=-.+....|++.++|||+.+ +.|.+.
T Consensus 189 ~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~a 245 (330)
T 4e5n_A 189 LRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAA 245 (330)
T ss_dssp EEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHH
T ss_pred cee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHH
Confidence 333 37899999999999998863 4444333567788998889999865 555443
No 268
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.40 E-value=0.0044 Score=60.35 Aligned_cols=114 Identities=11% Similarity=0.080 Sum_probs=79.7
Q ss_pred hcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCC
Q 011654 318 MFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPAS 397 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
.+..+.+++|+|+|+. .-+..+++.|...|++|.+|||.....+...+++
T Consensus 151 ~~~~l~g~~v~IiG~G----------~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-------------------- 200 (300)
T 2rir_A 151 TDYTIHGSQVAVLGLG----------RTGMTIARTFAALGANVKVGARSSAHLARITEMG-------------------- 200 (300)
T ss_dssp CSSCSTTSEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------------------
T ss_pred cCCCCCCCEEEEEccc----------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--------------------
Confidence 3457889999999974 3789999999999999999999764332211211
Q ss_pred CceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC---CChHHHhhcCcEEEEe
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI---LDVEKLREIGFIVYSI 465 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~~g~~y~~i 465 (480)
.......++++.++++|+|++++....+ +- ...+.|++..++||+-.- .+-+..+..|..++.+
T Consensus 201 ~~~~~~~~l~~~l~~aDvVi~~~p~~~i---~~-~~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~ 267 (300)
T 2rir_A 201 LVPFHTDELKEHVKDIDICINTIPSMIL---NQ-TVLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLA 267 (300)
T ss_dssp CEEEEGGGHHHHSTTCSEEEECCSSCCB---CH-HHHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEEC
T ss_pred CeEEchhhHHHHhhCCCEEEECCChhhh---CH-HHHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEEC
Confidence 0011125688889999999999997543 32 355788888899998652 1224455678887654
No 269
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.40 E-value=0.0013 Score=60.12 Aligned_cols=71 Identities=17% Similarity=0.238 Sum_probs=51.6
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.| .|.+|..++..|+++ |++|++++|++++.+.+..+ ..+..-++ ++...+++.++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~-~~~~~~D~--------------~d~~~~~~~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTHKD-INILQKDI--------------FDLTLSDLSDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHCSS-SEEEECCG--------------GGCCHHHHTTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhccCC-CeEEeccc--------------cChhhhhhcCCC
Confidence 8999999 599999999999998 99999999999888766422 11111111 010015678999
Q ss_pred EEEEeccCC
Q 011654 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||-|...+
T Consensus 64 ~vi~~ag~~ 72 (221)
T 3ew7_A 64 VVVDAYGIS 72 (221)
T ss_dssp EEEECCCSS
T ss_pred EEEECCcCC
Confidence 999998754
No 270
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.39 E-value=0.00045 Score=67.19 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=74.9
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .....+++.|...|.+|.+|||...... ..
T Consensus 119 ~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~---------------------------~~ 161 (290)
T 3gvx_A 119 LLYGKALGILGYG----------GIGRRVAHLAKAFGMRVIAYTRSSVDQN---------------------------VD 161 (290)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSSCCCTT---------------------------CS
T ss_pred eeecchheeeccC----------chhHHHHHHHHhhCcEEEEEeccccccc---------------------------cc
Confidence 4688999999985 4889999999999999999999754321 13
Q ss_pred eeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 401 NVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
...+++++.++++|+|+++++. ++.+.+=-....+.|++.++|||+.+ +.+.+.
T Consensus 162 ~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~a 218 (290)
T 3gvx_A 162 VISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPD 218 (290)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHH
T ss_pred cccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcc
Confidence 4556899999999999999986 44555433567788998889999864 445443
No 271
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.38 E-value=0.00017 Score=62.41 Aligned_cols=100 Identities=10% Similarity=0.010 Sum_probs=64.9
Q ss_pred cEEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGA----GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.+|..++.+|.+. ||+ +|++|+.+.. . .+ .++.+..++++.-.
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~--G~~--v~~vnp~~~~----~--~i--------------~G~~~~~sl~el~~ 69 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ--GYR--VLPVNPRFQG----E--EL--------------FGEEAVASLLDLKE 69 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT--TCE--EEEECGGGTT----S--EE--------------TTEECBSSGGGCCS
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC--CCE--EEEeCCCccc----C--cC--------------CCEEecCCHHHCCC
Confidence 47999999 89999999999988 897 6667765310 0 00 24666777887556
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
..|++++|+|.. .+.++++++.+.-. ..+++..++. .+++.+..++.+
T Consensus 70 ~vDlavi~vp~~---------------~~~~v~~~~~~~gi-~~i~~~~g~~----~~~~~~~a~~~G 117 (140)
T 1iuk_A 70 PVDILDVFRPPS---------------ALMDHLPEVLALRP-GLVWLQSGIR----HPEFEKALKEAG 117 (140)
T ss_dssp CCSEEEECSCHH---------------HHTTTHHHHHHHCC-SCEEECTTCC----CHHHHHHHHHTT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEEEcCCcC----HHHHHHHHHHcC
Confidence 899999999842 23444555554332 3555543332 355666666543
No 272
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.38 E-value=0.0006 Score=66.03 Aligned_cols=108 Identities=6% Similarity=0.074 Sum_probs=78.6
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++...+
T Consensus 2 ~~i~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~~ 49 (287)
T 3pef_A 2 QKFGFIGLGI----------MGSAMAKNLVKAGCSVTIWNRSPEKAEELAA----------------------LGAERAA 49 (287)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----------------------TTCEECS
T ss_pred CEEEEEeecH----------HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----------------------CCCeecC
Confidence 5899999876 8899999999999999999997554332221 2456778
Q ss_pred CHHHhcccccEEEEEeccc-ccccccH--HHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011654 405 DAYQAAKDAHGVCILTEWD-EFKTLDY--QKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~-~~~~~~~--~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
+++++++++|+|++++..+ ..++.-. +.+...+++..+|+|..+..... .+++.|..|..
T Consensus 50 ~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 50 TPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 9999999999999999865 3333211 45556777777999998766432 23355777764
No 273
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.38 E-value=0.00068 Score=69.16 Aligned_cols=70 Identities=20% Similarity=0.353 Sum_probs=52.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..++..|... |. +|+++|+++++.+.+.+. + .......+++.+.+.++|
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~-----------~-----g~~~~~~~~l~~~l~~aD 229 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARD-----------L-----GGEAVRFDELVDHLARSD 229 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHH-----------H-----TCEECCGGGHHHHHHTCS
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHH-----------c-----CCceecHHhHHHHhcCCC
Confidence 4799999999999999999987 87 999999999887555421 0 000001135566678999
Q ss_pred EEEEeccCC
Q 011654 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||.|+|.+
T Consensus 230 vVi~at~~~ 238 (404)
T 1gpj_A 230 VVVSATAAP 238 (404)
T ss_dssp EEEECCSSS
T ss_pred EEEEccCCC
Confidence 999998764
No 274
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.37 E-value=0.00028 Score=69.05 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=78.2
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+||+++||.. +...+++.|.+.|++|.+||......+...+ .+...++
T Consensus 4 ~kIgfIGlG~----------MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~----------------------~Ga~~a~ 51 (300)
T 3obb_A 4 KQIAFIGLGH----------MGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----------------------AGASAAR 51 (300)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSSHHHHHHHHH----------------------TTCEECS
T ss_pred CEEEEeeehH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------cCCEEcC
Confidence 5899999965 8999999999999999999986443322221 2456788
Q ss_pred CHHHhcccccEEEEEecccc-ccccc--HHHHHHhcCCCCEEEEcCCCCCh------HHHhhcCcEEEEec
Q 011654 405 DAYQAAKDAHGVCILTEWDE-FKTLD--YQKIFDNMRKPAYIFDGRNILDV------EKLREIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~~-~~~~~--~~~~~~~~~~~~~i~D~~~~~~~------~~~~~~g~~y~~iG 466 (480)
|+.++++++|+|+++...++ .++.- ...+.+.+++..+|||+..+-+. +.+++.|+.|.--.
T Consensus 52 s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 52 SARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp SHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred CHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 99999999999999877654 22211 11233455666799999988753 23446789887543
No 275
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.36 E-value=0.00027 Score=71.21 Aligned_cols=72 Identities=19% Similarity=0.206 Sum_probs=49.6
Q ss_pred EEEEEcCChhHHHHHHHHHHc------CCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHH
Q 011654 3 KICCIGAGYVGGPTMAVIALK------CPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKH 75 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~------~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a 75 (480)
||||||+|.||...+..+... .++.+|+ ++|+++++.+.+.+.. +.-++.+|+++.
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~el 89 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF-----------------GFEKATADWRAL 89 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH-----------------TCSEEESCHHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh-----------------CCCeecCCHHHH
Confidence 699999999998777665431 1355655 6799999888776420 122567899987
Q ss_pred hc--cCcEEEEeccCCCC
Q 011654 76 VA--EADIVFVSVNTPTK 91 (480)
Q Consensus 76 ~~--~aDvVii~Vptp~~ 91 (480)
++ +.|+|+||+|+..+
T Consensus 90 l~~~~iDaV~IatP~~~H 107 (393)
T 4fb5_A 90 IADPEVDVVSVTTPNQFH 107 (393)
T ss_dssp HHCTTCCEEEECSCGGGH
T ss_pred hcCCCCcEEEECCChHHH
Confidence 75 57999999886543
No 276
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.35 E-value=0.00068 Score=66.83 Aligned_cols=110 Identities=17% Similarity=0.188 Sum_probs=79.2
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+..+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++..
T Consensus 30 ~~~~I~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~----------------------~g~~~ 77 (320)
T 4dll_A 30 YARKITFLGTGS----------MGLPMARRLCEAGYALQVWNRTPARAASLAA----------------------LGATI 77 (320)
T ss_dssp CCSEEEEECCTT----------THHHHHHHHHHTTCEEEEECSCHHHHHHHHT----------------------TTCEE
T ss_pred CCCEEEEECccH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------CCCEe
Confidence 456999999966 8899999999999999999986543222211 24567
Q ss_pred ecCHHHhcccccEEEEEecccc-cccccHH--HHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011654 403 VWDAYQAAKDAHGVCILTEWDE-FKTLDYQ--KIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSI 465 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~--~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
.++++++++++|+|++++..+. .+.. .. .+...+++..+|||..+..... .+++.|..|..-
T Consensus 78 ~~~~~e~~~~aDvVi~~vp~~~~~~~v-~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 78 HEQARAAARDADIVVSMLENGAVVQDV-LFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDT 148 (320)
T ss_dssp ESSHHHHHTTCSEEEECCSSHHHHHHH-HTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred eCCHHHHHhcCCEEEEECCCHHHHHHH-HcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 7899999999999999998753 3321 11 4455677777999998876532 234557777643
No 277
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.34 E-value=0.0003 Score=67.58 Aligned_cols=96 Identities=9% Similarity=0.039 Sum_probs=65.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
.++.|||+|-+|.+++..|++. |.+|++++|++++.+.+.+- + +... ++++ +.++|+
T Consensus 119 k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~------------------~-~~~~-~~~~-l~~~Di 175 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRL------------------G-CDCF-MEPP-KSAFDL 175 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHH------------------T-CEEE-SSCC-SSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC------------------C-CeEe-cHHH-hccCCE
Confidence 4799999999999999999998 89999999999888776520 0 1121 2223 348999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||-|+|.....+ ...+.+ .+...++++.+|++.++.| .|
T Consensus 176 VInaTp~Gm~~~-----~~l~~~-------~l~~~l~~~~~v~D~vY~P-~T 214 (269)
T 3phh_A 176 IINATSASLHNE-----LPLNKE-------VLKGYFKEGKLAYDLAYGF-LT 214 (269)
T ss_dssp EEECCTTCCCCS-----CSSCHH-------HHHHHHHHCSEEEESCCSS-CC
T ss_pred EEEcccCCCCCC-----CCCChH-------HHHhhCCCCCEEEEeCCCC-ch
Confidence 999987653220 011211 1222345678999988876 44
No 278
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.33 E-value=0.00077 Score=66.99 Aligned_cols=93 Identities=8% Similarity=0.074 Sum_probs=67.8
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+.- ....+++.|...|.+|.+|||..... .
T Consensus 166 ~~~l~gktiGIIGlG~----------IG~~vA~~l~~~G~~V~~~dr~~~~~---------------------------~ 208 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQ----------IGRALASRAEAFGMSVRYWNRSTLSG---------------------------V 208 (340)
T ss_dssp CCCCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECSSCCTT---------------------------S
T ss_pred cccccCCEEEEECCCH----------HHHHHHHHHHHCCCEEEEEcCCcccc---------------------------c
Confidence 3567899999999854 88999999999999999999975431 1
Q ss_pred ceeeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
......+++++++++|+|+++++- ++-+.+=-.+..+.|++.+++||+.+
T Consensus 209 ~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aR 259 (340)
T 4dgs_A 209 DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVAR 259 (340)
T ss_dssp CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSC
T ss_pred CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 234457899999999999999885 33344322456678898889999854
No 279
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.33 E-value=0.00095 Score=65.00 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=80.1
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.+ ....++..|.+.|.+|.+||+.....+...+ .++...
T Consensus 15 ~~~I~vIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~ 62 (296)
T 3qha_A 15 QLKLGYIGLGN----------MGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----------------------AGATLA 62 (296)
T ss_dssp CCCEEEECCST----------THHHHHHHHTTSTTCEEEECSSTTTSHHHHH----------------------TTCEEC
T ss_pred CCeEEEECcCH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------------------CCCEEc
Confidence 35899999976 8899999999999999999987654332222 235677
Q ss_pred cCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011654 404 WDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSI 465 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
++++++++ +|+|++++..+. .++ -.+.+...+++..+|+|..+..... .+.+.|+.|..-
T Consensus 63 ~~~~~~~~-aDvvi~~vp~~~~~~~-v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~ 129 (296)
T 3qha_A 63 DSVADVAA-ADLIHITVLDDAQVRE-VVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDA 129 (296)
T ss_dssp SSHHHHTT-SSEEEECCSSHHHHHH-HHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEEC
T ss_pred CCHHHHHh-CCEEEEECCChHHHHH-HHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 89999999 999999998763 333 2366777777778999998876432 233457777643
No 280
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.32 E-value=0.0012 Score=65.46 Aligned_cols=100 Identities=17% Similarity=0.168 Sum_probs=75.1
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+|||....+. ...+ +
T Consensus 161 ~~l~g~tvgIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g 207 (335)
T 2g76_A 161 TELNGKTLGILGLGR----------IGREVATRMQSFGMKTIGYDPIISPEV-SASF----------------------G 207 (335)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECSSSCHHH-HHHT----------------------T
T ss_pred cCCCcCEEEEEeECH----------HHHHHHHHHHHCCCEEEEECCCcchhh-hhhc----------------------C
Confidence 467899999999854 788999999999999999999876542 2222 1
Q ss_pred eeeecCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCC--CCChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .++++.++++|+|+++++... .+.+=-..+.+.|++.+++||+.+ +.+.+
T Consensus 208 ~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~ 263 (335)
T 2g76_A 208 VQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEG 263 (335)
T ss_dssp CEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred cee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHH
Confidence 233 478999999999999988853 454322466788998889999755 44543
No 281
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.32 E-value=0.00071 Score=67.53 Aligned_cols=101 Identities=16% Similarity=0.198 Sum_probs=75.6
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.- ....+++.|...|++|.+|||...... ...+ ++
T Consensus 165 ~l~g~tvGIIG~G~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g~ 211 (347)
T 1mx3_A 165 RIRGETLGIIGLGR----------VGQAVALRAKAFGFNVLFYDPYLSDGV-ERAL----------------------GL 211 (347)
T ss_dssp CCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECTTSCTTH-HHHH----------------------TC
T ss_pred CCCCCEEEEEeECH----------HHHHHHHHHHHCCCEEEEECCCcchhh-Hhhc----------------------CC
Confidence 57899999999854 789999999999999999999865432 2222 23
Q ss_pred eeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCC--CChHH
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNI--LDVEK 454 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~--~~~~~ 454 (480)
.+..++++.++++|+|++++.-. +.+++=-.+..+.|++.+++||+.+- .+.+.
T Consensus 212 ~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~a 268 (347)
T 1mx3_A 212 QRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKA 268 (347)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHH
T ss_pred eecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHH
Confidence 44568899999999999998874 45553225566789988899998663 45443
No 282
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.32 E-value=0.00036 Score=67.00 Aligned_cols=69 Identities=9% Similarity=0.053 Sum_probs=50.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||.|.|+|++|..++..|.++ |++|++++++++..+.+......+.. +.+ +|++ +.++|
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~---~d~~--~~~~d 65 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLL------------WPG---EEPS--LDGVT 65 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEE------------SSS---SCCC--CTTCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEE------------ecc---cccc--cCCCC
Confidence 47999999999999999999998 99999999999877766542111100 001 1222 57899
Q ss_pred EEEEeccC
Q 011654 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 66 ~vi~~a~~ 73 (286)
T 3ius_A 66 HLLISTAP 73 (286)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998763
No 283
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.31 E-value=0.0018 Score=63.93 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=70.7
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHH--HHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVAVVDISVS--RIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV- 76 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~--~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~- 76 (480)
|+||.|||+|-+|.+ +|..|.++ |++|+++|.++. ..+.|.+... .+..-.+++...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~~~gi-----------------~v~~g~~~~~l~~ 64 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLEALGI-----------------DVYEGFDAAQLDE 64 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHTTC-----------------EEEESCCGGGGGS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHHhCCC-----------------EEECCCCHHHcCC
Confidence 689999999999996 88888888 999999998642 3344443211 122223444422
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHH----------HHHhhC-CCCCEEEEecCCccchHHH-HHHHHHhc
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----------MIANVS-NSNKIVVEKSTVPVKTAEA-IEKILTHN 144 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~----------~i~~~l-~~~~iVi~~STv~~gt~~~-l~~~l~~~ 144 (480)
.++|+||++-.-|. |...++.+.+ -+...+ +...+|-+..|..-.||.. +..+|++.
T Consensus 65 ~~~d~vV~Spgi~~-----------~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 65 FKADVYVIGNVAKR-----------GMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp CCCSEEEECTTCCT-----------TCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCcCC-----------CCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 47999998743332 2223333322 123322 3346777777877666665 56778765
Q ss_pred C
Q 011654 145 S 145 (480)
Q Consensus 145 ~ 145 (480)
+
T Consensus 134 g 134 (326)
T 3eag_A 134 G 134 (326)
T ss_dssp T
T ss_pred C
Confidence 3
No 284
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.29 E-value=0.00097 Score=65.83 Aligned_cols=100 Identities=12% Similarity=0.110 Sum_probs=75.6
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECC-CCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDP-QVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+.+++|+|+|+.- ....+++.|...|.+|.+||| ....+ ...++ +
T Consensus 143 ~l~g~~vgIIG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~----------------------g 189 (320)
T 1gdh_A 143 KLDNKTLGIYGFGS----------IGQALAKRAQGFDMDIDYFDTHRASSS-DEASY----------------------Q 189 (320)
T ss_dssp CCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHH----------------------T
T ss_pred CCCCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEECCCCcChh-hhhhc----------------------C
Confidence 56899999999854 789999999999999999999 77653 22222 2
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCC--CChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNI--LDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~--~~~~ 453 (480)
+.+.+++++.++++|+|+++++.. +.+++=-....+.|++.+++||+.+- .+.+
T Consensus 190 ~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~ 246 (320)
T 1gdh_A 190 ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNE 246 (320)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHH
Confidence 344557899999999999999874 45543224566889988899999764 5644
No 285
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.29 E-value=0.001 Score=67.32 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=76.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .....+++.|...|.+|.+||+.....+....++
T Consensus 187 ~~l~gktvGIIGlG----------~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G---------------------- 234 (393)
T 2nac_A 187 YDLEAMHVGTVAAG----------RIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN---------------------- 234 (393)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT----------------------
T ss_pred ccCCCCEEEEEeEC----------HHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcC----------------------
Confidence 46789999999985 4889999999999999999999865443333322
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+..++++.++++|+|++++... +.+++=-....+.|++.+++||+.+ +.+.+
T Consensus 235 ~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~ 291 (393)
T 2nac_A 235 LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRD 291 (393)
T ss_dssp CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHH
Confidence 344467899999999999999863 4454322566788998889999876 45543
No 286
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.28 E-value=0.0012 Score=65.48 Aligned_cols=95 Identities=18% Similarity=0.223 Sum_probs=73.4
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.. .+..+++.|...|.+|.+||+.... +....++
T Consensus 146 ~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g---------------------- 192 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGR----------IGQAIAKRAKGFNMRILYYSRTRKE-EVERELN---------------------- 192 (334)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHC----------------------
T ss_pred cCCCCCEEEEEccCH----------HHHHHHHHHHhCCCEEEEECCCcch-hhHhhcC----------------------
Confidence 457889999999866 8899999999999999999998766 3222221
Q ss_pred eeeecCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCC
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
+.+ .+++++++++|+|++++.... .+.+=-.++...|++..+|+|+.+
T Consensus 193 ~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 193 AEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred ccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 233 478899999999999998765 454332566778988889999865
No 287
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.28 E-value=0.00091 Score=66.30 Aligned_cols=102 Identities=11% Similarity=0.161 Sum_probs=75.0
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.. .+..+++.|...|.+|.+||+.....+....+ +
T Consensus 151 ~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----------------------g 198 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGR----------IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF----------------------Q 198 (330)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT----------------------T
T ss_pred cCCCCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEECCCCcchhHHHhc----------------------C
Confidence 357889999999866 88999999999999999999976532222211 2
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCC--CChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNI--LDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~--~~~~~ 454 (480)
+.+. +++++++++|+|++++... +.+.+=-.++.+.|++.+++||+.+. .+.+.
T Consensus 199 ~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~a 255 (330)
T 2gcg_A 199 AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDD 255 (330)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHH
T ss_pred ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHH
Confidence 3444 7889999999999999875 34443225566788887899998764 55443
No 288
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.27 E-value=0.00075 Score=58.54 Aligned_cols=98 Identities=9% Similarity=-0.034 Sum_probs=63.7
Q ss_pred cEEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGA----GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.+|..++..|.+. |++ +|++|+.. +.+ .++.+..++++...
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~--G~~--v~~Vnp~~-~~i---------------------~G~~~y~sl~~l~~ 76 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH--GYD--VYPVNPKY-EEV---------------------LGRKCYPSVLDIPD 76 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCE--EEEECTTC-SEE---------------------TTEECBSSGGGCSS
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC--CCE--EEEECCCC-CeE---------------------CCeeccCCHHHcCC
Confidence 47999999 79999999999987 897 55666542 100 24566677887556
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
..|++++|||.+ .+.++++++.+.-. ..++ +.++.. .+++.+.+++.+
T Consensus 77 ~vDlvvi~vp~~---------------~~~~vv~~~~~~gi-~~i~-~~~g~~---~~~l~~~a~~~G 124 (144)
T 2d59_A 77 KIEVVDLFVKPK---------------LTMEYVEQAIKKGA-KVVW-FQYNTY---NREASKKADEAG 124 (144)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHTC-SEEE-ECTTCC---CHHHHHHHHHTT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEE-ECCCch---HHHHHHHHHHcC
Confidence 899999998842 34566666555332 3444 333322 355666666543
No 289
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.26 E-value=0.0009 Score=66.41 Aligned_cols=100 Identities=14% Similarity=0.165 Sum_probs=74.8
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.- -...+++.|...|.+|.+|||....... +. ++
T Consensus 138 ~l~g~tvgIiG~G~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~----------------------g~ 183 (334)
T 2pi1_A 138 ELNRLTLGVIGTGR----------IGSRVAMYGLAFGMKVLCYDVVKREDLK--EK----------------------GC 183 (334)
T ss_dssp CGGGSEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCHHHH--HT----------------------TC
T ss_pred eccCceEEEECcCH----------HHHHHHHHHHHCcCEEEEECCCcchhhH--hc----------------------Cc
Confidence 46789999999854 7899999999999999999998865421 11 23
Q ss_pred eeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
.+. +++++++++|+|++++... +-+.+=-....+.|++.+++||+.+ +.+.+.+
T Consensus 184 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL 240 (334)
T 2pi1_A 184 VYT-SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDAL 240 (334)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred eec-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHH
Confidence 333 5899999999999998873 4444323456688998889999865 5565443
No 290
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.26 E-value=0.0008 Score=66.02 Aligned_cols=110 Identities=8% Similarity=0.043 Sum_probs=78.7
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+-.+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++..
T Consensus 20 ~m~~I~iIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~----------------------~g~~~ 67 (310)
T 3doj_A 20 HMMEVGFLGLGI----------MGKAMSMNLLKNGFKVTVWNRTLSKCDELVE----------------------HGASV 67 (310)
T ss_dssp CSCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----------------------TTCEE
T ss_pred cCCEEEEECccH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------------------CCCeE
Confidence 446999999976 8999999999999999999997654332222 23566
Q ss_pred ecCHHHhcccccEEEEEecccc-ccccc--HHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011654 403 VWDAYQAAKDAHGVCILTEWDE-FKTLD--YQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~-~~~~~--~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
.+++.++++++|+|++++..+. .++.- .+.+...+++..+|+|+.++.... .+.+.|..|..
T Consensus 68 ~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 68 CESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp CSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 7899999999999999997653 33211 033445666777999998876432 23355777755
No 291
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.25 E-value=0.0016 Score=63.93 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=74.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|...|++|.+|||....+ ...++ +
T Consensus 138 ~~l~g~~vgIiG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~----------------------g 184 (307)
T 1wwk_A 138 IELEGKTIGIIGFGR----------IGYQVAKIANALGMNILLYDPYPNEE-RAKEV----------------------N 184 (307)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCHH-HHHHT----------------------T
T ss_pred cccCCceEEEEccCH----------HHHHHHHHHHHCCCEEEEECCCCChh-hHhhc----------------------C
Confidence 357899999999854 78999999999999999999988763 22222 1
Q ss_pred eeeecCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCC--CCChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .++++.++++|+|+++++... .+++=-....+.|++.+++||+.+ +.+.+
T Consensus 185 ~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 185 GKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHH
Confidence 233 378899999999999988743 454322456678998889999876 45544
No 292
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.23 E-value=0.00076 Score=68.34 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=35.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
.+|+|||+|.+|...+..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4799999999999999988877 8899999999887766654
No 293
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.23 E-value=0.00038 Score=69.05 Aligned_cols=61 Identities=15% Similarity=0.201 Sum_probs=46.5
Q ss_pred cEEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc-
Q 011654 2 VKICCIGAGYVGG-PTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||. ..+..|.+. ++.+|+ ++|+++++ .++...+|+++.+++
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-~~~~lvav~d~~~~~-------------------------~g~~~~~~~~~ll~~~ 79 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-ANFKLVATASRHGTV-------------------------EGVNSYTTIEAMLDAE 79 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-TTEEEEEEECSSCCC-------------------------TTSEEESSHHHHHHHC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-CCeEEEEEEeCChhh-------------------------cCCCccCCHHHHHhCC
Confidence 5899999999998 688888875 578865 57887431 124567888887764
Q ss_pred --CcEEEEeccC
Q 011654 79 --ADIVFVSVNT 88 (480)
Q Consensus 79 --aDvVii~Vpt 88 (480)
.|+|+||+|+
T Consensus 80 ~~vD~V~i~tp~ 91 (330)
T 4ew6_A 80 PSIDAVSLCMPP 91 (330)
T ss_dssp TTCCEEEECSCH
T ss_pred CCCCEEEEeCCc
Confidence 8999999875
No 294
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.23 E-value=0.0021 Score=65.12 Aligned_cols=93 Identities=12% Similarity=0.151 Sum_probs=66.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHH---HHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRI---AAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v---~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+||+|||.|.-|.+-|.+|.+. |.+|++=-|..... ..+.+ ....++++. +++++++.
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDS--Gv~V~Vglr~~s~~e~~~S~~~----------------A~~~Gf~v~-~~~eA~~~ 98 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDS--GLDISYALRKEAIAEKRASWRK----------------ATENGFKVG-TYEELIPQ 98 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT--TCEEEEEECHHHHHTTCHHHHH----------------HHHTTCEEE-EHHHHGGG
T ss_pred CEEEEeCCChHhHHHHhHHHhc--CCcEEEEeCCCCcccccchHHH----------------HHHCCCEec-CHHHHHHh
Confidence 5899999999999999999998 99998765522210 01110 001245544 57889999
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+|+|++-+|...+ ..+.+.|.+++++|..+.....
T Consensus 99 ADvV~~L~PD~~q---------------~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 99 ADLVINLTPDKQH---------------SDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp CSEEEECSCGGGH---------------HHHHHHHGGGSCTTCEEEESSC
T ss_pred CCEEEEeCChhhH---------------HHHHHHHHhhCCCCCEEEecCc
Confidence 9999999885321 3456789999999999987544
No 295
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.22 E-value=0.00017 Score=71.72 Aligned_cols=86 Identities=19% Similarity=0.183 Sum_probs=51.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHC-CCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAV-VDISVSRIAAWNG-DQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~-~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|+|+|+||..++..|.++ +++++++ .|++++....+.. .....+. .+...+.......+.+..++++.+.+
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~-~~~~~v~~~~~~~l~v~~~~~~~~~~ 78 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYV-AIPERVKLFEKAGIEVAGTVDDMLDE 78 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEE-SSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-CCcEEEEEEcCChhHHHHhcCCcchhhcc-ccccceeeecCCceEEcCCHHHHhcC
Confidence 68999999999999999999875 4777755 5776554443332 1111111 00000000001234444466666679
Q ss_pred CcEEEEeccC
Q 011654 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|+||.|+|.
T Consensus 79 vDvV~~atp~ 88 (337)
T 1cf2_P 79 ADIVIDCTPE 88 (337)
T ss_dssp CSEEEECCST
T ss_pred CCEEEECCCc
Confidence 9999999774
No 296
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.22 E-value=0.0008 Score=66.98 Aligned_cols=84 Identities=20% Similarity=0.270 Sum_probs=54.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHH-CCCCCCCCC-ChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWN-GDQLPIYEP-GLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~-~~~~~~~e~-~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||||+|+|+||..++..|..+ ++.+|+ +.|++++....+. ....+.+.. ..++++. ..++..+.+.++...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~---~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFE---ESGIPVAGTVEDLIK 76 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHH---TTTCCCCCCHHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhc---ccccccccCHhHhhc
Confidence 57999999999999999998865 567765 4577755443332 222333221 2333332 234555667777667
Q ss_pred cCcEEEEeccC
Q 011654 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|+||+|+|.
T Consensus 77 ~vDvV~~aTp~ 87 (340)
T 1b7g_O 77 TSDIVVDTTPN 87 (340)
T ss_dssp HCSEEEECCST
T ss_pred CCCEEEECCCC
Confidence 89999999774
No 297
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.22 E-value=0.0013 Score=65.27 Aligned_cols=93 Identities=14% Similarity=0.224 Sum_probs=72.3
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.. ....+++.|...|.+|.+||+....+ ...++ ++
T Consensus 143 ~l~g~~vgIIG~G~----------iG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~----------------------g~ 189 (333)
T 2d0i_A 143 SLYGKKVGILGMGA----------IGKAIARRLIPFGVKLYYWSRHRKVN-VEKEL----------------------KA 189 (333)
T ss_dssp CSTTCEEEEECCSH----------HHHHHHHHHGGGTCEEEEECSSCCHH-HHHHH----------------------TE
T ss_pred CCCcCEEEEEccCH----------HHHHHHHHHHHCCCEEEEECCCcchh-hhhhc----------------------Cc
Confidence 57899999999865 88999999999999999999987752 22222 13
Q ss_pred eeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.+ .+++++++++|+|++++... +.+.+=-+.+...|++. +++|+.+
T Consensus 190 ~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 190 RY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred ee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence 33 37888999999999999987 56654334566788888 9999865
No 298
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.20 E-value=0.0002 Score=71.18 Aligned_cols=83 Identities=13% Similarity=0.180 Sum_probs=53.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHC-CCCCCCC--C-ChHHHHHhhcCCCEEEecCHHHHh
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNG-DQLPIYE--P-GLEDVVTQCRGRNLFFSTDIEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~-~~~~~~e--~-~l~~l~~~~~~~~l~~t~d~~~a~ 76 (480)
+||||+|+|+||..++..|... ++.+++ +.|++++....+.+ .....+. + .+..+ . .+.+.+.+++++.+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~-~---~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRF-E---KEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHH-H---HHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceec-c---CCceEEcCcHHHhc
Confidence 5999999999999999998875 567765 46887766655443 1111110 0 01011 0 11234556888877
Q ss_pred ccCcEEEEeccCC
Q 011654 77 AEADIVFVSVNTP 89 (480)
Q Consensus 77 ~~aDvVii~Vptp 89 (480)
.++|+|++|+|..
T Consensus 78 ~~vDvV~~aTp~~ 90 (334)
T 2czc_A 78 EKVDIIVDATPGG 90 (334)
T ss_dssp TTCSEEEECCSTT
T ss_pred cCCCEEEECCCcc
Confidence 8999999997753
No 299
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.20 E-value=0.00096 Score=66.41 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=74.1
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.- -...+++.|...|.+|.+|||..... . . ...
T Consensus 145 ~l~gktvgIiGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~~ 189 (343)
T 2yq5_A 145 EIYNLTVGLIGVGH----------IGSAVAEIFSAMGAKVIAYDVAYNPE-F-E-----------------------PFL 189 (343)
T ss_dssp CGGGSEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCGG-G-T-----------------------TTC
T ss_pred ccCCCeEEEEecCH----------HHHHHHHHHhhCCCEEEEECCChhhh-h-h-----------------------ccc
Confidence 46789999999854 78999999999999999999987542 1 0 112
Q ss_pred eeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 401 NVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
.+. +++++++++|+|+++++. ++-+.+=-.+..+.|++.+++||+.+ +.|.+.+
T Consensus 190 ~~~-~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL 246 (343)
T 2yq5_A 190 TYT-DFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGAL 246 (343)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHH
T ss_pred ccc-CHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHH
Confidence 333 899999999999999986 33344322456678998889999975 5565443
No 300
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.19 E-value=0.0013 Score=66.17 Aligned_cols=103 Identities=20% Similarity=0.224 Sum_probs=77.1
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCE-EEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAK-LSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
..+.+++|+|+|+. .....+++.|...|++ |.+||+.....+....+
T Consensus 160 ~~l~g~tvgIIG~G----------~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~---------------------- 207 (364)
T 2j6i_A 160 YDIEGKTIATIGAG----------RIGYRVLERLVPFNPKELLYYDYQALPKDAEEKV---------------------- 207 (364)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHT----------------------
T ss_pred ccCCCCEEEEECcC----------HHHHHHHHHHHhCCCcEEEEECCCccchhHHHhc----------------------
Confidence 46789999999985 4889999999999997 99999876443332222
Q ss_pred ceeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
++....++++.++++|+|++++... +.+.+=-....+.|++.++|||+.+ +.+.+.
T Consensus 208 g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~a 266 (364)
T 2j6i_A 208 GARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAED 266 (364)
T ss_dssp TEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHH
T ss_pred CcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHH
Confidence 2344568899999999999999885 4444322456688998889999876 456543
No 301
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.18 E-value=0.0012 Score=65.38 Aligned_cols=93 Identities=11% Similarity=0.152 Sum_probs=72.3
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|...|.+|.+||+..... .+
T Consensus 160 ~~l~g~~vgIIG~G~----------iG~~vA~~l~~~G~~V~~~dr~~~~~---------------------------~g 202 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGR----------IGLAVAERAEAFDCPISYFSRSKKPN---------------------------TN 202 (333)
T ss_dssp CCCTTCCEEEECCSH----------HHHHHHHHHHTTTCCEEEECSSCCTT---------------------------CC
T ss_pred cccCCCEEEEECCCH----------HHHHHHHHHHHCCCEEEEECCCchhc---------------------------cC
Confidence 467899999999855 88999999999999999999975421 12
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCC
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNI 449 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
.....+++++++++|+|++++... +.+.+=-.++.+.|++.++|||+.+-
T Consensus 203 ~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG 253 (333)
T 3ba1_A 203 YTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRG 253 (333)
T ss_dssp SEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred ceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 234568899999999999999874 45554324556788887899998764
No 302
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.18 E-value=0.00074 Score=62.30 Aligned_cols=73 Identities=19% Similarity=0.326 Sum_probs=50.2
Q ss_pred CcE-EEEEc-CChhHHHHHHHHH-HcCCCCeEEEEeCCHH-HHHHHH-CC-CCCCCCCChHHHHHhhcCCCEEEecCHHH
Q 011654 1 MVK-ICCIG-AGYVGGPTMAVIA-LKCPKIEVAVVDISVS-RIAAWN-GD-QLPIYEPGLEDVVTQCRGRNLFFSTDIEK 74 (480)
Q Consensus 1 imk-I~VIG-lG~~G~~lA~~La-~~~~G~~V~~~D~~~~-~v~~l~-~~-~~~~~e~~l~~l~~~~~~~~l~~t~d~~~ 74 (480)
||| |.|.| .|.+|..++..|+ +. |++|++++++++ +.+.+. .+ ...+. .+.+.-..++.+
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~D~~d~~~~~~ 69 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVI------------EGSFQNPGXLEQ 69 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEE------------ECCTTCHHHHHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEE------------ECCCCCHHHHHH
Confidence 566 99999 5999999999999 77 999999999998 776663 11 10000 001110123345
Q ss_pred HhccCcEEEEecc
Q 011654 75 HVAEADIVFVSVN 87 (480)
Q Consensus 75 a~~~aDvVii~Vp 87 (480)
+++++|+||.+.+
T Consensus 70 ~~~~~d~vv~~ag 82 (221)
T 3r6d_A 70 AVTNAEVVFVGAM 82 (221)
T ss_dssp HHTTCSEEEESCC
T ss_pred HHcCCCEEEEcCC
Confidence 6788999999975
No 303
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.17 E-value=0.0019 Score=63.54 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=74.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|...|++|.+|||...... ...+ +
T Consensus 138 ~~l~g~~vgIIG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g 184 (313)
T 2ekl_A 138 LELAGKTIGIVGFGR----------IGTKVGIIANAMGMKVLAYDILDIREK-AEKI----------------------N 184 (313)
T ss_dssp CCCTTCEEEEESCSH----------HHHHHHHHHHHTTCEEEEECSSCCHHH-HHHT----------------------T
T ss_pred CCCCCCEEEEEeeCH----------HHHHHHHHHHHCCCEEEEECCCcchhH-HHhc----------------------C
Confidence 467899999999854 889999999999999999999877542 2222 1
Q ss_pred eeeecCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCC--CCChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
+.+ .++++.++++|+|+++++... .+++=-....+.|++.+++||+.+ +.+.+
T Consensus 185 ~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~ 240 (313)
T 2ekl_A 185 AKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGK 240 (313)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHH
T ss_pred cee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHH
Confidence 233 378899999999999998743 444322456678998889999866 45544
No 304
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.16 E-value=0.0012 Score=69.66 Aligned_cols=95 Identities=15% Similarity=0.187 Sum_probs=73.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|.+.|.+|.+|||....+. ..+++
T Consensus 138 ~~l~g~~vgIIG~G~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~-a~~~g---------------------- 184 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGR----------IGQLVAQRIAAFGAYVVAYDPYVSPAR-AAQLG---------------------- 184 (529)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECTTSCHHH-HHHHT----------------------
T ss_pred cccCCCEEEEEeeCH----------HHHHHHHHHHhCCCEEEEECCCCChhH-HHhcC----------------------
Confidence 357899999999865 788999999999999999999875433 22222
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
+... +++++++++|+|+++++.. +.+++=-+.+...|++.++|+|+..
T Consensus 185 ~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~ar 233 (529)
T 1ygy_A 185 IELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAAR 233 (529)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred cEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCC
Confidence 2333 7889999999999999886 6666433456778988889999865
No 305
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.13 E-value=0.00061 Score=65.98 Aligned_cols=122 Identities=11% Similarity=0.149 Sum_probs=71.0
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAV-VDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+||+|+| +|.||..++..+... ++.++++ +|+++... .|. ++.++.. ....++.+++|+++.+.++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~~~~----~G~------d~gel~G-~~~~gv~v~~dl~~ll~~a 89 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKGSSF----VDK------DASILIG-SDFLGVRITDDPESAFSNT 89 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTTCTT----TTS------BGGGGTT-CSCCSCBCBSCHHHHTTSC
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccc----ccc------chHHhhc-cCcCCceeeCCHHHHhcCC
Confidence 6899999 999999999988865 5788665 58764210 010 1111100 0113466788999988999
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC-ccchHHHHHHHHHhcCCCCceeEeeCCcc
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV-PVKTAEAIEKILTHNSREIKYQILSNPEF 158 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|++|-+.+ | ..+.+.+...++.+.-+|+.||- .+...++|.+..+ ...++++|.+
T Consensus 90 DVvIDFT~-p-----------------~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~------~~~~~~a~N~ 145 (288)
T 3ijp_A 90 EGILDFSQ-P-----------------QASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAK------YTTIVKSGNM 145 (288)
T ss_dssp SEEEECSC-H-----------------HHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHT------TSEEEECSCC
T ss_pred CEEEEcCC-H-----------------HHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhC------cCCEEEECCC
Confidence 99998753 2 22333344444456667766653 2212222333222 2457788875
Q ss_pred c
Q 011654 159 L 159 (480)
Q Consensus 159 ~ 159 (480)
.
T Consensus 146 S 146 (288)
T 3ijp_A 146 S 146 (288)
T ss_dssp C
T ss_pred c
Confidence 4
No 306
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.13 E-value=0.0029 Score=65.39 Aligned_cols=114 Identities=12% Similarity=0.098 Sum_probs=69.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH----HHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVS----RIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~----~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
+||.|||+|..|.+.|..|+++ |++|+++|.++. ..+.|.+... .+..-.+.++.+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~~~~~~~~~~L~~~gi-----------------~~~~g~~~~~~~~ 70 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKPFDENPTAQSLLEEGI-----------------KVVCGSHPLELLD 70 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSCGGGCHHHHHHHHTTC-----------------EEEESCCCGGGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCcccCChHHHHHHhCCC-----------------EEEECCChHHhhc
Confidence 4899999999999999999998 999999998542 2334432111 1222223333345
Q ss_pred c-CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHH---------HHHhhCCCCCEEEEecCCccchHHH-HHHHHHhcC
Q 011654 78 E-ADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR---------MIANVSNSNKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 78 ~-aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---------~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+ +|+||++..-|.+ ...+..+.+ ++...+.+..+|-+..|..-.||.. +..+|++.+
T Consensus 71 ~~~d~vv~spgi~~~-----------~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 71 EDFCYMIKNPGIPYN-----------NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp SCEEEEEECTTSCTT-----------SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCcCCCC-----------ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 5 8999988544322 122333322 1222222456777777877666655 567777654
No 307
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.12 E-value=0.00097 Score=65.89 Aligned_cols=101 Identities=9% Similarity=0.036 Sum_probs=74.3
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|...|.+|.+||+.....+. ...
T Consensus 133 ~~l~gktvGIiGlG~----------IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------------------~~~ 178 (324)
T 3evt_A 133 STLTGQQLLIYGTGQ----------IGQSLAAKASALGMHVIGVNTTGHPADH------------------------FHE 178 (324)
T ss_dssp CCSTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESSCCCCTT------------------------CSE
T ss_pred ccccCCeEEEECcCH----------HHHHHHHHHHhCCCEEEEECCCcchhHh------------------------Hhh
Confidence 467899999999854 7899999999999999999997543210 011
Q ss_pred eeeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
.....++++.++++|+|++++.. ++-+.+=-.+..+.|++.+++||+.+ +.+.+.
T Consensus 179 ~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~a 236 (324)
T 3evt_A 179 TVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTA 236 (324)
T ss_dssp EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHH
T ss_pred ccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHH
Confidence 12245788999999999999886 34444323566778998889999875 556544
No 308
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.10 E-value=0.0014 Score=66.72 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=74.9
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+|||..... ...
T Consensus 141 ~el~gktlGiIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~--------------------------~~~ 184 (404)
T 1sc6_A 141 FEARGKKLGIIGYGH----------IGTQLGILAESLGMYVYFYDIENKLP--------------------------LGN 184 (404)
T ss_dssp CCSTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCCC--------------------------CTT
T ss_pred cccCCCEEEEEeECH----------HHHHHHHHHHHCCCEEEEEcCCchhc--------------------------cCC
Confidence 457899999999854 78999999999999999999964321 012
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVE 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~ 453 (480)
.....++++.++++|+|+++++.. +-+++=-....+.|++.+++||+.+ +.+.+
T Consensus 185 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~ 241 (404)
T 1sc6_A 185 ATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIP 241 (404)
T ss_dssp CEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHH
T ss_pred ceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHH
Confidence 345568999999999999999885 4454322456688998889999976 45544
No 309
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.09 E-value=0.0032 Score=62.17 Aligned_cols=73 Identities=19% Similarity=0.311 Sum_probs=52.5
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCC-------eEEEEeCCH--HHHH----HHHCCCCCCCCCChHHHHHhhcCCCEE
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKI-------EVAVVDISV--SRIA----AWNGDQLPIYEPGLEDVVTQCRGRNLF 67 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~-------~V~~~D~~~--~~v~----~l~~~~~~~~e~~l~~l~~~~~~~~l~ 67 (480)
|||.|+|. |.+|.+++..|..+ |+ +|+++|+++ ++.+ .+.....++ . +.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~------------~-~di~ 69 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL------------L-AGLE 69 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT------------E-EEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc------------c-CCeE
Confidence 79999996 99999999999987 75 899999974 2222 222211111 0 2456
Q ss_pred EecCHHHHhccCcEEEEeccCC
Q 011654 68 FSTDIEKHVAEADIVFVSVNTP 89 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp 89 (480)
.+++..++++++|+||.+...+
T Consensus 70 ~~~~~~~a~~~~D~Vih~Ag~~ 91 (327)
T 1y7t_A 70 ATDDPKVAFKDADYALLVGAAP 91 (327)
T ss_dssp EESCHHHHTTTCSEEEECCCCC
T ss_pred eccChHHHhCCCCEEEECCCcC
Confidence 6677788899999999997654
No 310
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.08 E-value=0.0015 Score=65.47 Aligned_cols=99 Identities=22% Similarity=0.316 Sum_probs=66.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCE-EEe---cCHHHHhc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNL-FFS---TDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l-~~t---~d~~~a~~ 77 (480)
.+|.|+|+|.+|...+..+... |.+|+++|+++++.+.+.+-. . ..+ ... .++.+.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~------------~----~~~~~~~~~~~~~~~~~~ 229 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLF------------G----SRVELLYSNSAEIETAVA 229 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------------G----GGSEEEECCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhh------------C----ceeEeeeCCHHHHHHHHc
Confidence 4799999999999999999887 889999999999988775310 0 011 111 23445567
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCc
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVP 130 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
++|+||-|++.|... .+.+ ..+...+.++++.+|++.+..+
T Consensus 230 ~~DvVI~~~~~~~~~-------~~~l-----i~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 230 EADLLIGAVLVPGRR-------APIL-----VPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp TCSEEEECCCCTTSS-------CCCC-----BCHHHHTTSCTTCEEEETTCTT
T ss_pred CCCEEEECCCcCCCC-------CCee-----cCHHHHhhCCCCCEEEEEecCC
Confidence 899999998765321 1110 0122345677888888765443
No 311
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.07 E-value=0.0028 Score=65.49 Aligned_cols=75 Identities=17% Similarity=0.234 Sum_probs=51.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|.|+|+|.+|..++..|++. |++|+++|+++++.+.+.+....+. . ....+.-..++.++++++|+
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~---------~-~~~Dv~d~~~l~~~l~~~Dv 71 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHST---------P-ISLDVNDDAALDAEVAKHDL 71 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEE---------E-EECCTTCHHHHHHHHTTSSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCce---------E-EEeecCCHHHHHHHHcCCcE
Confidence 5899999999999999999987 8999999999998887764210000 0 00000000123455678999
Q ss_pred EEEeccC
Q 011654 82 VFVSVNT 88 (480)
Q Consensus 82 Vii~Vpt 88 (480)
||.|+|.
T Consensus 72 VIn~a~~ 78 (450)
T 1ff9_A 72 VISLIPY 78 (450)
T ss_dssp EEECCC-
T ss_pred EEECCcc
Confidence 9999874
No 312
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.07 E-value=0.11 Score=49.47 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=74.6
Q ss_pred CCEEEecCHHHHhccCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHh
Q 011654 64 RNLFFSTDIEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTH 143 (480)
Q Consensus 64 ~~l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
-++++++|-.||++++|++|+-+| ... .-..+++.+.++++.|.+|....|+||-. +..+++.
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftP--fG~------------~t~~Iakkii~~lpEgAII~nTCTipp~~---ly~~le~ 189 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLP--KGN------------KQPDIIKKFADAIPEGAIVTHACTIPTTK---FAKIFKD 189 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCT--TCT------------THHHHHHHHGGGSCTTCEEEECSSSCHHH---HHHHHHH
T ss_pred cCcEeecchHHHhcCCCEEEEecC--CCC------------CcHHHHHHHHhhCcCCCEEecccCCCHHH---HHHHHHH
Confidence 467899998999999999999965 321 12567899999999999999989998754 3444554
Q ss_pred cCCCCceeEe-eCCccccccccccccCCCCeEEEEeCCCcchHHHHHHHHHHHhccC
Q 011654 144 NSREIKYQIL-SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQALKDVYAHWV 199 (480)
Q Consensus 144 ~~~g~~~~v~-~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~~~~~~l~~~~~ 199 (480)
.. ..|+.+. ++|- .-||..- +..+|-. -.+++.++++.+|-++..
T Consensus 190 l~-R~DvgIsS~HPa-aVPgt~G-------q~~~g~~--yAtEEqIeklveLaksa~ 235 (358)
T 2b0j_A 190 LG-REDLNITSYHPG-CVPEMKG-------QVYIAEG--YASEEAVNKLYEIGKIAR 235 (358)
T ss_dssp TT-CTTSEEEECBCS-SCTTTCC-------CEEEEES--SSCHHHHHHHHHHHHHHH
T ss_pred hC-cccCCeeccCCC-CCCCCCC-------ccccccc--cCCHHHHHHHHHHHHHhC
Confidence 33 2345554 5774 3354421 2345532 236889999999988875
No 313
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.06 E-value=0.00049 Score=67.69 Aligned_cols=70 Identities=23% Similarity=0.294 Sum_probs=46.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHH-HHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh---
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEV-AVVDISVSR-IAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV--- 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~-v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~--- 76 (480)
+||+|||+|++|..++..+.++.++.++ .++|+++++ ...+.+.. +....+++.++.+
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-----------------g~~~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-----------------GVTTTYAGVEGLIKLP 67 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-----------------TCCEESSHHHHHHHSG
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-----------------CCCcccCCHHHHHhcc
Confidence 5899999999999999998663356664 468998776 34432210 1112234455543
Q ss_pred --ccCcEEEEeccC
Q 011654 77 --AEADIVFVSVNT 88 (480)
Q Consensus 77 --~~aDvVii~Vpt 88 (480)
.+.|+||+|+|+
T Consensus 68 ~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 68 EFADIDFVFDATSA 81 (312)
T ss_dssp GGGGEEEEEECSCH
T ss_pred CCCCCcEEEECCCh
Confidence 458999999874
No 314
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.06 E-value=0.0018 Score=62.88 Aligned_cols=65 Identities=18% Similarity=0.163 Sum_probs=48.4
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|+|+ |.||..++..+.+. |++ .++++|+.+. +.. ..++.+.++++++.+ +
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~--g~~-~V~~V~p~~~-----g~~---------------~~G~~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY--GTK-MVGGVTPGKG-----GTT---------------HLGLPVFNTVREAVAATG 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TCE---------------ETTEEEESSHHHHHHHHC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCe-EEEEeCCCcc-----cce---------------eCCeeccCCHHHHhhcCC
Confidence 58999998 99999999999887 788 4455555321 100 024677888888777 8
Q ss_pred CcEEEEeccCC
Q 011654 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|++++|+|.+
T Consensus 65 ~D~viI~tP~~ 75 (288)
T 2nu8_A 65 ATASVIYVPAP 75 (288)
T ss_dssp CCEEEECCCGG
T ss_pred CCEEEEecCHH
Confidence 99999999864
No 315
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.06 E-value=0.0026 Score=63.83 Aligned_cols=116 Identities=16% Similarity=0.194 Sum_probs=68.7
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCC-C--CeEEEEeCCHH----HHH----HHHCCCCCCCCCChHHHHHhhcCCCEEEe
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCP-K--IEVAVVDISVS----RIA----AWNGDQLPIYEPGLEDVVTQCRGRNLFFS 69 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~-G--~~V~~~D~~~~----~v~----~l~~~~~~~~e~~l~~l~~~~~~~~l~~t 69 (480)
+||+||| +|.+|.++|..|+.+.- + .++.++|.+.+ +++ .|+....++ ..+.+.+
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~-------------~~~v~i~ 99 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-------------LREVSIG 99 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-------------EEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh-------------cCCcEEe
Confidence 6899999 79999999999987621 1 12777665432 222 223221111 0134566
Q ss_pred cCHHHHhccCcEEEEeccCCCCcCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCCEEEEecCCccchHH
Q 011654 70 TDIEKHVAEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARMIANVSNSNKIVVEKSTVPVKTAE 135 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
++..+++++||+||++-..|..+ | .+ +.| .+.+++..+.|.++..++.+|++- |.|..+.-
T Consensus 100 ~~~y~~~~daDvVVitag~prkp-G--~t-R~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~~t 165 (375)
T 7mdh_A 100 IDPYEVFEDVDWALLIGAKPRGP-G--ME-RAALLDINGQIFADQGKALNAVASKNVKVLVV-GNPCNTNA 165 (375)
T ss_dssp SCHHHHTTTCSEEEECCCCCCCT-T--CC-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHHH
T ss_pred cCCHHHhCCCCEEEEcCCCCCCC-C--CC-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhHHH
Confidence 66667799999999987666433 1 11 222 244555556677765555655543 46766543
No 316
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.03 E-value=0.0025 Score=54.72 Aligned_cols=106 Identities=15% Similarity=0.087 Sum_probs=73.9
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+.++|+|+|+|-++ ++++..+++.|.+.|++|...||.... + .++..
T Consensus 13 ~p~~IavIGaS~~~------g~~G~~~~~~L~~~G~~V~~vnp~~~~--i-------------------------~G~~~ 59 (138)
T 1y81_A 13 EFRKIALVGASKNP------AKYGNIILKDLLSKGFEVLPVNPNYDE--I-------------------------EGLKC 59 (138)
T ss_dssp -CCEEEEETCCSCT------TSHHHHHHHHHHHTTCEEEEECTTCSE--E-------------------------TTEEC
T ss_pred CCCeEEEEeecCCC------CCHHHHHHHHHHHCCCEEEEeCCCCCe--E-------------------------CCeee
Confidence 56899999998765 578999999999999999999997421 1 13455
Q ss_pred ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH---HHhhcCcEEEE
Q 011654 403 VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE---KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y~~ 464 (480)
..|+.+..+..|++++.+.-+.-.++ ..++.+ .+.+.++++... +.++ ..++.|++|.|
T Consensus 60 ~~s~~el~~~vDlvii~vp~~~v~~v-~~~~~~-~g~~~i~~~~~~-~~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 60 YRSVRELPKDVDVIVFVVPPKVGLQV-AKEAVE-AGFKKLWFQPGA-ESEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp BSSGGGSCTTCCEEEECSCHHHHHHH-HHHHHH-TTCCEEEECTTS-CCHHHHHHHHHHTCEEEC
T ss_pred cCCHHHhCCCCCEEEEEeCHHHHHHH-HHHHHH-cCCCEEEEcCcc-HHHHHHHHHHHCCCEEEc
Confidence 66888887889999999984332222 233444 344568888755 4443 34467999865
No 317
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.02 E-value=0.0014 Score=68.13 Aligned_cols=76 Identities=17% Similarity=0.254 Sum_probs=52.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++|.|+|+|.+|.+++..|++. +|++|++++|++++.+.+.+.. .+. . . ...+.-.+++.++++++|
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~~-~~~---~------~-~~D~~d~~~l~~~l~~~D 90 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKPS-GSK---A------I-SLDVTDDSALDKVLADND 90 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGGG-TCE---E------E-ECCTTCHHHHHHHHHTSS
T ss_pred CCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhc-CCc---E------E-EEecCCHHHHHHHHcCCC
Confidence 35899999999999999999976 3689999999999988876420 000 0 0 000000013445577899
Q ss_pred EEEEeccC
Q 011654 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||.|+|.
T Consensus 91 vVIn~tp~ 98 (467)
T 2axq_A 91 VVISLIPY 98 (467)
T ss_dssp EEEECSCG
T ss_pred EEEECCch
Confidence 99999874
No 318
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.02 E-value=0.00096 Score=65.16 Aligned_cols=109 Identities=10% Similarity=0.035 Sum_probs=75.7
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee-
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV- 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 402 (480)
..+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+. +...
T Consensus 7 ~~~I~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----------------------g~~~~ 54 (303)
T 3g0o_A 7 DFHVGIVGLGS----------MGMGAARSCLRAGLSTWGADLNPQACANLLAE----------------------GACGA 54 (303)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----------------------TCSEE
T ss_pred CCeEEEECCCH----------HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----------------------CCccc
Confidence 46899999876 88999999999999999999865432222211 2233
Q ss_pred ecCHHHhcccccEEEEEecccc-cccccH--HHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011654 403 VWDAYQAAKDAHGVCILTEWDE-FKTLDY--QKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
.+++.++++++|+|++++..+. .+..-+ +.+...+++..+|+|+.+..... .+.+.|..|..
T Consensus 55 ~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 55 AASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp ESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 6788999999999999998753 322100 23445666677999998876422 22345777765
No 319
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.02 E-value=0.0018 Score=65.92 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=72.0
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.- -...+++.|...|.+|.+|||..... ....
T Consensus 153 el~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~yd~~~~~~--------------------------~~~~ 196 (416)
T 3k5p_A 153 EVRGKTLGIVGYGN----------IGSQVGNLAESLGMTVRYYDTSDKLQ--------------------------YGNV 196 (416)
T ss_dssp CSTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECTTCCCC--------------------------BTTB
T ss_pred cCCCCEEEEEeeCH----------HHHHHHHHHHHCCCEEEEECCcchhc--------------------------ccCc
Confidence 46899999999854 78999999999999999999963210 0123
Q ss_pred eeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
....++++.++.+|+|+++++.. +-+.+=-....+.|++.+++||+.+ +.|.+.
T Consensus 197 ~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~a 253 (416)
T 3k5p_A 197 KPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEA 253 (416)
T ss_dssp EECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHH
T ss_pred EecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHH
Confidence 44578999999999999998873 3444322456678998889999865 555543
No 320
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.02 E-value=0.00047 Score=64.55 Aligned_cols=68 Identities=13% Similarity=0.090 Sum_probs=49.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecC---HHHH-hc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTD---IEKH-VA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d---~~~a-~~ 77 (480)
++|.|+|+|.+|..+|..|.+. |+ |+++|+++++++.+..+...+. +. .++ ++++ +.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~~~~~~i~-------------gd---~~~~~~l~~a~i~ 70 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLRSGANFVH-------------GD---PTRVSDLEKANVR 70 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHHTTCEEEE-------------SC---TTCHHHHHHTTCT
T ss_pred CEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHhcCCeEEE-------------cC---CCCHHHHHhcCcc
Confidence 5799999999999999999887 89 9999999999887763211110 00 112 2222 67
Q ss_pred cCcEEEEeccC
Q 011654 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|.||++++.
T Consensus 71 ~ad~vi~~~~~ 81 (234)
T 2aef_A 71 GARAVIVDLES 81 (234)
T ss_dssp TCSEEEECCSC
T ss_pred hhcEEEEcCCC
Confidence 89999999764
No 321
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.01 E-value=0.0013 Score=64.12 Aligned_cols=65 Identities=11% Similarity=0.234 Sum_probs=44.5
Q ss_pred cEEEEEcCChhHHHHHHHHHHc--CCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 2 VKICCIGAGYVGGPTMAVIALK--CPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~--~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
+||+|||+|.||...+..|... .++.+++ ++|+++ ..+ ..++. .+|+++.++
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a~------------------~~g~~-~~~~~ell~~ 63 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LGS------------------LDEVR-QISLEDALRS 63 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CCE------------------ETTEE-BCCHHHHHHC
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HHH------------------HcCCC-CCCHHHHhcC
Confidence 6899999999999999888641 1366765 567642 000 01233 368888775
Q ss_pred -cCcEEEEeccCCC
Q 011654 78 -EADIVFVSVNTPT 90 (480)
Q Consensus 78 -~aDvVii~Vptp~ 90 (480)
+.|+|++|+|+..
T Consensus 64 ~~vD~V~i~tp~~~ 77 (294)
T 1lc0_A 64 QEIDVAYICSESSS 77 (294)
T ss_dssp SSEEEEEECSCGGG
T ss_pred CCCCEEEEeCCcHh
Confidence 6899999988643
No 322
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.99 E-value=0.0018 Score=63.60 Aligned_cols=108 Identities=14% Similarity=0.065 Sum_probs=79.4
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC-EEEEECCCC--ChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKA-KLSIYDPQV--TEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~-~V~~~DP~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
..+|+|+|+.. ....++..|.+.|. +|.+||+.. ...+...+ .++
T Consensus 24 ~~~I~iIG~G~----------mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~----------------------~g~ 71 (312)
T 3qsg_A 24 AMKLGFIGFGE----------AASAIASGLRQAGAIDMAAYDAASAESWRPRAEE----------------------LGV 71 (312)
T ss_dssp -CEEEEECCSH----------HHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH----------------------TTC
T ss_pred CCEEEEECccH----------HHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH----------------------CCC
Confidence 46899999976 88999999999999 999999963 22221111 235
Q ss_pred eeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhc--CcEEEE
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREI--GFIVYS 464 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~--g~~y~~ 464 (480)
...+++.++++++|+|++++.-+...+ -.+.+...+++..+|||+..+.... .+.+. |..|..
T Consensus 72 ~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 72 SCKASVAEVAGECDVIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp EECSCHHHHHHHCSEEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEeCCHHHHHhcCCEEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 667899999999999999998877554 2466777777777999999877532 23344 777754
No 323
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.97 E-value=0.0022 Score=66.70 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=84.2
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. ....++..|.++|.+|.+||......+...+.+. ....+...
T Consensus 4 ~~kIgiIGlG~----------MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~-----------------~g~~i~~~ 56 (484)
T 4gwg_A 4 QADIALIGLAV----------MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA-----------------KGTKVVGA 56 (484)
T ss_dssp CBSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT-----------------TTSSCEEC
T ss_pred CCEEEEEChhH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhccc-----------------CCCceecc
Confidence 45899999976 8999999999999999999997654332221100 00134446
Q ss_pred cCHHHhcc---cccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEecCCC
Q 011654 404 WDAYQAAK---DAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSIGKPL 469 (480)
Q Consensus 404 ~~~~~a~~---~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG~~~ 469 (480)
.+++++++ ++|+|+++++.+ ..++ -.+.+...+++..+|||+.+..... .+.+.|+.|.+.+...
T Consensus 57 ~s~~e~v~~l~~aDvVil~Vp~~~~v~~-vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 57 QSLKEMVSKLKKPRRIILLVKAGQAVDD-FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp SSHHHHHHTBCSSCEEEECSCSSHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred CCHHHHHhhccCCCEEEEecCChHHHHH-HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 78888776 599999999986 3443 2367777887778999999988532 3445699998876433
No 324
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.95 E-value=0.00089 Score=64.79 Aligned_cols=109 Identities=6% Similarity=0.015 Sum_probs=77.1
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
++|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++...+
T Consensus 2 ~~I~iiG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~~ 49 (287)
T 3pdu_A 2 TTYGFLGLGI----------MGGPMAANLVRAGFDVTVWNRNPAKCAPLVA----------------------LGARQAS 49 (287)
T ss_dssp CCEEEECCST----------THHHHHHHHHHHTCCEEEECSSGGGGHHHHH----------------------HTCEECS
T ss_pred CeEEEEccCH----------HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----------------------CCCeecC
Confidence 4799999865 8899999999999999999987654332222 1356678
Q ss_pred CHHHhcccccEEEEEeccc-ccccccH--HHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011654 405 DAYQAAKDAHGVCILTEWD-EFKTLDY--QKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSI 465 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~-~~~~~~~--~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
++.++++++|+|++++..+ ..++.-. +.+...+++..+|+|+....... .+.+.|+.|..-
T Consensus 50 ~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~ 119 (287)
T 3pdu_A 50 SPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA 119 (287)
T ss_dssp CHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 9999999999999999876 3333110 33445566677999998865432 223457777543
No 325
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.95 E-value=0.0015 Score=63.65 Aligned_cols=107 Identities=17% Similarity=0.219 Sum_probs=75.2
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++...+
T Consensus 4 ~~I~iiG~G~----------mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----------------------~g~~~~~ 51 (302)
T 2h78_A 4 KQIAFIGLGH----------MGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----------------------AGASAAR 51 (302)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSSHHHHHHHHH----------------------TTCEECS
T ss_pred CEEEEEeecH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------CCCeEcC
Confidence 5899999866 8899999999999999999986443222211 2456678
Q ss_pred CHHHhcccccEEEEEecccc-cccccHH---HHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011654 405 DAYQAAKDAHGVCILTEWDE-FKTLDYQ---KIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~~-~~~~~~~---~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
+++++++++|+|++++..+. .++. .. .+...+++..+|+|..+..... .+.+.|..|..
T Consensus 52 ~~~~~~~~aDvvi~~vp~~~~~~~v-~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 52 SARDAVQGADVVISMLPASQHVEGL-YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp SHHHHHTTCSEEEECCSCHHHHHHH-HHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHhCCCeEEEECCCHHHHHHH-HcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 99999999999999997553 3321 11 3444566677999998776533 12344776754
No 326
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.95 E-value=0.001 Score=65.73 Aligned_cols=101 Identities=14% Similarity=0.054 Sum_probs=73.2
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+||+....... ...
T Consensus 136 ~~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------------------~~~ 181 (324)
T 3hg7_A 136 QGLKGRTLLILGTG----------SIGQHIAHTGKHFGMKVLGVSRSGRERAG------------------------FDQ 181 (324)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCCCTT------------------------CSE
T ss_pred cccccceEEEEEEC----------HHHHHHHHHHHhCCCEEEEEcCChHHhhh------------------------hhc
Confidence 35789999999984 48899999999999999999997532110 011
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
.....++++.++++|+|+++++.. +-+.+=-.+..+.|++.+++||+.+ ++|.+.
T Consensus 182 ~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~a 239 (324)
T 3hg7_A 182 VYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGD 239 (324)
T ss_dssp EECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHH
T ss_pred ccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHH
Confidence 222468899999999999998863 3333222345678898889999965 556543
No 327
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.94 E-value=0.0021 Score=64.73 Aligned_cols=99 Identities=12% Similarity=0.138 Sum_probs=73.1
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+.- -...+++.|...|.+|.+|||..... . .
T Consensus 114 g~~l~gktvGIIGlG~----------IG~~vA~~l~a~G~~V~~~d~~~~~~----~----------------------~ 157 (381)
T 3oet_A 114 GFSLRDRTIGIVGVGN----------VGSRLQTRLEALGIRTLLCDPPRAAR----G----------------------D 157 (381)
T ss_dssp TCCGGGCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECHHHHHT----T----------------------C
T ss_pred CCccCCCEEEEEeECH----------HHHHHHHHHHHCCCEEEEECCChHHh----c----------------------c
Confidence 4577899999999854 78999999999999999999942111 0 0
Q ss_pred ceeeecCHHHhcccccEEEEEeccc-c----ccc-ccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWD-E----FKT-LDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~-~----~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
. ....+++++++++|+|+++++.. + -+. ++ ....+.|++.+++||+.+ ++|.+.+
T Consensus 158 ~-~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~aRG~vvde~aL 220 (381)
T 3oet_A 158 E-GDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD-ETLIRRLKPGAILINACRGPVVDNAAL 220 (381)
T ss_dssp C-SCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC-HHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred C-cccCCHHHHHhhCCEEEEcCcCCccccccchhhcC-HHHHhcCCCCcEEEECCCCcccCHHHH
Confidence 1 12358999999999999999764 2 223 44 456678998889999865 5665543
No 328
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.94 E-value=0.00035 Score=64.61 Aligned_cols=74 Identities=23% Similarity=0.264 Sum_probs=49.7
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||.|.| .|.+|..++..|+++ |++|+++++++++.+.+..+ ..+. .+.+.-..++.++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~-~~~~------------~~Dl~d~~~~~~~~~~~ 68 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIENEH-LKVK------------KADVSSLDEVCEVCKGA 68 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCCTT-EEEE------------CCCTTCHHHHHHHHTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhccCc-eEEE------------EecCCCHHHHHHHhcCC
Confidence 57999999 599999999999998 99999999997754322111 0000 01111112344567889
Q ss_pred cEEEEeccCC
Q 011654 80 DIVFVSVNTP 89 (480)
Q Consensus 80 DvVii~Vptp 89 (480)
|+||-|....
T Consensus 69 d~vi~~a~~~ 78 (227)
T 3dhn_A 69 DAVISAFNPG 78 (227)
T ss_dssp SEEEECCCC-
T ss_pred CEEEEeCcCC
Confidence 9999997643
No 329
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.92 E-value=0.0024 Score=66.59 Aligned_cols=118 Identities=14% Similarity=0.220 Sum_probs=81.9
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+..++|+|+|+.- ....++..|.++|.+|.+||......+...... + ..++
T Consensus 12 ~~~~~~IgvIGlG~----------MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~--------~----------~~gi 63 (480)
T 2zyd_A 12 HMSKQQIGVVGMAV----------MGRNLALNIESRGYTVSIFNRSREKTEEVIAEN--------P----------GKKL 63 (480)
T ss_dssp ---CBSEEEECCSH----------HHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS--------T----------TSCE
T ss_pred ccCCCeEEEEccHH----------HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC--------C----------CCCe
Confidence 35678999999864 899999999999999999998644322111100 0 0246
Q ss_pred eeecCHHHhccc---ccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEecC
Q 011654 401 NVVWDAYQAAKD---AHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSIGK 467 (480)
Q Consensus 401 ~~~~~~~~a~~~---ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG~ 467 (480)
....++++++++ +|+|+++++.+ ..++. .+.+...+++..+|||+.+..... .+.+.|+.|.+.+.
T Consensus 64 ~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~v-l~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv 139 (480)
T 2zyd_A 64 VPYYTVKEFVESLETPRRILLMVKAGAGTDAA-IDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGV 139 (480)
T ss_dssp EECSSHHHHHHTBCSSCEEEECSCSSSHHHHH-HHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeCCHHHHHhCCCCCCEEEEECCCHHHHHHH-HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCcc
Confidence 677889998887 99999999985 45542 356667777667999999988542 23345888866543
No 330
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.92 E-value=0.00083 Score=66.62 Aligned_cols=73 Identities=10% Similarity=0.091 Sum_probs=47.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCH-HHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISV-SRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~-~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
|+||+|||+|.+|...+..| . ++.+|+ ++|+++ ++.+.+.+. ..+. .-.....+|+++.++
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~--~~~~lvav~d~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~ll~~ 65 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-D--EECSITGIAPGVPEEDLSKLEKA------------ISEM-NIKPKKYNNWWEMLEK 65 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-C--TTEEEEEEECSSTTCCCHHHHHH------------HHTT-TCCCEECSSHHHHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-C--CCcEEEEEecCCchhhHHHHHHH------------HHHc-CCCCcccCCHHHHhcC
Confidence 46999999999988777666 3 478877 588886 333332210 0000 001356788888775
Q ss_pred -cCcEEEEeccCC
Q 011654 78 -EADIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
+.|+|+||+|+.
T Consensus 66 ~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 66 EKPDILVINTVFS 78 (337)
T ss_dssp HCCSEEEECSSHH
T ss_pred CCCCEEEEeCCcc
Confidence 589999998754
No 331
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.91 E-value=0.0009 Score=62.56 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=48.5
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPK-IEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
||+|.|.| .|.+|..++..|++. | ++|++++|++++.+.+......+. .+.++-..++++++++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~------------~~Dl~d~~~~~~~~~~ 88 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQII------------MGDVLNHAALKQAMQG 88 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEE------------ECCTTCHHHHHHHHTT
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEE------------EecCCCHHHHHHHhcC
Confidence 45789999 699999999999998 8 899999999875433221100000 0111111224456788
Q ss_pred CcEEEEeccC
Q 011654 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|+||.+.+.
T Consensus 89 ~D~vv~~a~~ 98 (236)
T 3qvo_A 89 QDIVYANLTG 98 (236)
T ss_dssp CSEEEEECCS
T ss_pred CCEEEEcCCC
Confidence 9999988753
No 332
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.91 E-value=0.001 Score=69.10 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=38.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
|||-|+|+|.+|..+|..|... ||+|+++|.|+++++.+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~ 44 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQD 44 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH
Confidence 8999999999999999999987 9999999999999998874
No 333
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.90 E-value=0.0012 Score=65.50 Aligned_cols=34 Identities=21% Similarity=0.580 Sum_probs=28.9
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDIS 35 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||||+|+| .|++|..+...|..+ |.+++..+..+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~ 38 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVS 38 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEec
Confidence 68999999 599999999999885 67888877543
No 334
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.90 E-value=0.0033 Score=61.45 Aligned_cols=94 Identities=17% Similarity=0.162 Sum_probs=71.9
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .....+++.|...|.+|.+|||... +. ..
T Consensus 121 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~dr~~~-~~---------------------------~~ 162 (303)
T 1qp8_A 121 LIQGEKVAVLGLG----------EIGTRVGKILAALGAQVRGFSRTPK-EG---------------------------PW 162 (303)
T ss_dssp CCTTCEEEEESCS----------THHHHHHHHHHHTTCEEEEECSSCC-CS---------------------------SS
T ss_pred CCCCCEEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCcc-cc---------------------------Cc
Confidence 5789999999984 4889999999999999999999754 11 01
Q ss_pred eeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCCh
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDV 452 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~ 452 (480)
....++++.++.+|+|+++++.. +.+++=-..+.+.|++.+++||+.+ +.+.
T Consensus 163 ~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~ 217 (303)
T 1qp8_A 163 RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDR 217 (303)
T ss_dssp CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCH
T ss_pred ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCH
Confidence 12357889999999999999885 4454322466788998889999976 3454
No 335
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.87 E-value=0.0033 Score=62.29 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=76.0
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|..-|.+|.+|||+..+..... .
T Consensus 137 ~~l~g~tvGIiG~G~----------IG~~va~~~~~fg~~v~~~d~~~~~~~~~~------------------------~ 182 (334)
T 3kb6_A 137 RELNRLTLGVIGTGR----------IGSRVAMYGLAFGMKVLCYDVVKREDLKEK------------------------G 182 (334)
T ss_dssp CCGGGSEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCHHHHHT------------------------T
T ss_pred ceecCcEEEEECcch----------HHHHHHHhhcccCceeeecCCccchhhhhc------------------------C
Confidence 356789999999854 678999999999999999999876532211 1
Q ss_pred eeeecCHHHhcccccEEEEEecc-ccccc-ccHHHHHHhcCCCCEEEEcCC--CCChHHHh
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEW-DEFKT-LDYQKIFDNMRKPAYIFDGRN--ILDVEKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h-~~~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~~~ 456 (480)
.. ..++++.++.+|+|+++++. ++-+. ++-+. .+.|++.+++|.+.+ ++|.+.+-
T Consensus 183 ~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~-l~~mk~~a~lIN~aRG~iVde~aL~ 241 (334)
T 3kb6_A 183 CV-YTSLDELLKESDVISLHVPYTKETHHMINEER-ISLMKDGVYLINTARGKVVDTDALY 241 (334)
T ss_dssp CE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHH-HHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred ce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHH-HhhcCCCeEEEecCccccccHHHHH
Confidence 22 35889999999999999887 44444 55544 578998889999865 77765443
No 336
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.87 E-value=0.0028 Score=65.59 Aligned_cols=88 Identities=20% Similarity=0.126 Sum_probs=64.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|+|+|.+|..+|..|+.. |.+|+++|+++.+.+..... ... ..+.++++..+|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~~~~a~~Aa~~-------------------g~d-v~~lee~~~~aDv 323 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQA--GARVIVTEIDPICALQATME-------------------GLQ-VLTLEDVVSEADI 323 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCE-ECCGGGTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-------------------CCc-cCCHHHHHHhcCE
Confidence 4789999999999999999998 89999999999876554431 122 2456777889999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.+.++..- .+ ....+.++++.+|++.+-
T Consensus 324 Vi~atG~~~v---------l~--------~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 324 FVTTTGNKDI---------IM--------LDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp EEECSSCSCS---------BC--------HHHHTTSCTTEEEEESSS
T ss_pred EEeCCCChhh---------hh--------HHHHHhcCCCeEEEEcCC
Confidence 9988664311 11 123456788888887653
No 337
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.87 E-value=0.0011 Score=61.09 Aligned_cols=104 Identities=12% Similarity=0.189 Sum_probs=61.3
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEE-ecCHHHHhccC
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFF-STDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~-t~d~~~a~~~a 79 (480)
|||.|.| .|.+|..++..|+++ |++|++++|++++.+.+ .+ ..+. .+.+.- ..++.++++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-~~-~~~~------------~~D~~d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY-NN-VKAV------------HFDVDWTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC-TT-EEEE------------ECCTTSCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc-CC-ceEE------------EecccCCHHHHHHHHcCC
Confidence 7999999 799999999999998 99999999998654322 00 0000 011100 11234456789
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS 127 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
|+||-|....... ....++.....+++...+. ..+.+|..+|
T Consensus 65 d~vi~~ag~~~~~-----~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS 106 (219)
T 3dqp_A 65 DAIINVSGSGGKS-----LLKVDLYGAVKLMQAAEKA-EVKRFILLST 106 (219)
T ss_dssp SEEEECCCCTTSS-----CCCCCCHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CEEEECCcCCCCC-----cEeEeHHHHHHHHHHHHHh-CCCEEEEECc
Confidence 9999998654311 1133444444555444332 2234554443
No 338
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.86 E-value=0.0038 Score=61.38 Aligned_cols=108 Identities=19% Similarity=0.118 Sum_probs=76.9
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCC-CEEEEECCCCC----hHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDK-AKLSIYDPQVT----EDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g-~~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+|+|+|+.+ ....++..|.+.| .+|.+||+... .++....+. ..+
T Consensus 25 m~IgvIG~G~----------mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~-------------------~~g 75 (317)
T 4ezb_A 25 TTIAFIGFGE----------AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAA-------------------ELG 75 (317)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHH-------------------HTT
T ss_pred CeEEEECccH----------HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHH-------------------HCC
Confidence 5899999976 8899999999999 99999998642 111111111 012
Q ss_pred eeeec-CHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEE
Q 011654 400 VNVVW-DAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYS 464 (480)
Q Consensus 400 ~~~~~-~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~ 464 (480)
+ .+ ++.++++++|+|++++.-+...+ ..+.+...+++..+|||..++.... .+++.|..|..
T Consensus 76 ~--~~~s~~e~~~~aDvVi~avp~~~~~~-~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 76 V--EPLDDVAGIACADVVLSLVVGAATKA-VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp C--EEESSGGGGGGCSEEEECCCGGGHHH-HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred C--CCCCHHHHHhcCCEEEEecCCHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 2 45 78899999999999998877554 2366777777777999998766432 23345777754
No 339
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.85 E-value=0.0082 Score=61.19 Aligned_cols=116 Identities=15% Similarity=0.126 Sum_probs=80.5
Q ss_pred HHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCC
Q 011654 315 VSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
.+..+..+.+++|+|+|+.- -...+++.|...|++|.+|||..........
T Consensus 202 ~ratg~~L~GktVgIiG~G~----------IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~------------------- 252 (436)
T 3h9u_A 202 KRATDVMIAGKTACVCGYGD----------VGKGCAAALRGFGARVVVTEVDPINALQAAM------------------- 252 (436)
T ss_dssp HHHHCCCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------
T ss_pred HHhcCCcccCCEEEEEeeCH----------HHHHHHHHHHHCCCEEEEECCChhhhHHHHH-------------------
Confidence 33445678899999999643 6889999999999999999996432211111
Q ss_pred CCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC---CChHHHhhcCcEEEEec
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI---LDVEKLREIGFIVYSIG 466 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~~g~~y~~iG 466 (480)
.+..+ .+++++++++|+|++.+....+ ++. +..+.|++.++|++.-+- +|.+.+........++-
T Consensus 253 ---~G~~~-~sL~eal~~ADVVilt~gt~~i--I~~-e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir 320 (436)
T 3h9u_A 253 ---EGYQV-LLVEDVVEEAHIFVTTTGNDDI--ITS-EHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVK 320 (436)
T ss_dssp ---TTCEE-CCHHHHTTTCSEEEECSSCSCS--BCT-TTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEE
T ss_pred ---hCCee-cCHHHHHhhCCEEEECCCCcCc--cCH-HHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeec
Confidence 12222 4899999999999986654432 332 345778888899998652 46666766666666664
No 340
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.84 E-value=0.00042 Score=64.31 Aligned_cols=69 Identities=22% Similarity=0.365 Sum_probs=44.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.+|..++..+....+|++++ ++|.|+++......+ -.+...+++++.+++.|
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~g------------------v~V~~~~dl~eli~~~D 147 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGG------------------VPVYNLDDLEQHVKDES 147 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETT------------------EEEEEGGGHHHHCSSCC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcC------------------CeeechhhHHHHHHhCC
Confidence 57999999999999999422111377766 579998765432221 01334567777676569
Q ss_pred EEEEeccC
Q 011654 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
++++|+|+
T Consensus 148 ~ViIAvPs 155 (215)
T 2vt3_A 148 VAILTVPA 155 (215)
T ss_dssp EEEECSCH
T ss_pred EEEEecCc
Confidence 99999884
No 341
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.83 E-value=0.0039 Score=61.82 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=74.6
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|...|++|.+|||..... . .++
T Consensus 142 ~~l~g~~vgIiG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~----------------------- 186 (333)
T 1j4a_A 142 REVRDQVVGVVGTGH----------IGQVFMQIMEGFGAKVITYDIFRNPE-L-EKK----------------------- 186 (333)
T ss_dssp CCGGGSEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCHH-H-HHT-----------------------
T ss_pred ccCCCCEEEEEccCH----------HHHHHHHHHHHCCCEEEEECCCcchh-H-Hhh-----------------------
Confidence 356789999999854 78899999999999999999987654 2 111
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+.+.+++++.++++|+|++++... +.+++=-....+.|++.+++||+.+ +.+.+.
T Consensus 187 ~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~a 244 (333)
T 1j4a_A 187 GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDA 244 (333)
T ss_dssp TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHH
Confidence 123457889999999999999874 3554322456678988889999865 455443
No 342
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.81 E-value=0.005 Score=59.53 Aligned_cols=75 Identities=21% Similarity=0.233 Sum_probs=55.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEec--CHHHHhcc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFST--DIEKHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~--d~~~a~~~ 78 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|++++.+.+.+. +-.......+...+ ++.+.+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~-----------~~~~~~~~~i~~~~~~~l~~~l~~ 194 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADV-----------INNAVGREAVVGVDARGIEDVIAA 194 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHH-----------HHHHHTSCCEEEECSTTHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHH-----------HHhhcCCceEEEcCHHHHHHHHhc
Confidence 4789999999999999999998 87 799999999988877542 10000011244444 67777889
Q ss_pred CcEEEEeccCC
Q 011654 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+||-|+|..
T Consensus 195 ~DiVInaTp~G 205 (283)
T 3jyo_A 195 ADGVVNATPMG 205 (283)
T ss_dssp SSEEEECSSTT
T ss_pred CCEEEECCCCC
Confidence 99999998754
No 343
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.80 E-value=0.0042 Score=60.72 Aligned_cols=111 Identities=8% Similarity=-0.001 Sum_probs=77.6
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCcee
Q 011654 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVN 401 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
....+|+|+|+.. ....+++.|.+.|.+|.+||+.....+...+ .++.
T Consensus 7 ~~~~~IgiIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~ 54 (306)
T 3l6d_A 7 SFEFDVSVIGLGA----------MGTIMAQVLLKQGKRVAIWNRSPGKAAALVA----------------------AGAH 54 (306)
T ss_dssp CCSCSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHH----------------------HTCE
T ss_pred cCCCeEEEECCCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------------------CCCe
Confidence 3457899999866 8899999999999999999986543222221 1345
Q ss_pred eecCHHHhcccccEEEEEecccc-cccc-cHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEe
Q 011654 402 VVWDAYQAAKDAHGVCILTEWDE-FKTL-DYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSI 465 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~h~~-~~~~-~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~i 465 (480)
..+++.++++++|+|++++..+. .+++ ..+.+.. +.+..+|||+...-... .+++.|..|..-
T Consensus 55 ~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 55 LCESVKAALSASPATIFVLLDNHATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp ECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 67899999999999999998764 4331 1013333 34566999998876532 234568888653
No 344
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.79 E-value=0.0023 Score=60.48 Aligned_cols=99 Identities=16% Similarity=0.023 Sum_probs=66.3
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChH-------HH----HHhhhccccCCCCCCCC
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTED-------QI----QRDLSMKKFDWDHPIHL 389 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~-------~~----~~~~~~~~~~~~~~~~~ 389 (480)
.+..++|+|+|+.. ....++..|.+.|.+|.+||...... +. ...+..
T Consensus 16 ~~~~~kIgiIG~G~----------mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----------- 74 (245)
T 3dtt_A 16 YFQGMKIAVLGTGT----------VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP----------- 74 (245)
T ss_dssp ---CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-----------
T ss_pred ccCCCeEEEECCCH----------HHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-----------
Confidence 56789999999865 88999999999999999999864320 00 011100
Q ss_pred CCCCCCCCCceeeecCHHHhcccccEEEEEecccccccccHHHH-HHhcCCCCEEEEcCCC
Q 011654 390 QPMSPPASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKI-FDNMRKPAYIFDGRNI 449 (480)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~-~~~~~~~~~i~D~~~~ 449 (480)
... .....++.++++++|+|++++..+...+. ...+ ...+ +..+|||+.|-
T Consensus 75 ------~~~-~~~~~~~~e~~~~aDvVilavp~~~~~~~-~~~i~~~~l-~g~ivi~~s~~ 126 (245)
T 3dtt_A 75 ------EHP-HVHLAAFADVAAGAELVVNATEGASSIAA-LTAAGAENL-AGKILVDIANP 126 (245)
T ss_dssp ------GST-TCEEEEHHHHHHHCSEEEECSCGGGHHHH-HHHHCHHHH-TTSEEEECCCC
T ss_pred ------hcC-ceeccCHHHHHhcCCEEEEccCcHHHHHH-HHHhhhhhc-CCCEEEECCCC
Confidence 001 12356788999999999999998876542 2234 3444 44599999963
No 345
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.79 E-value=0.005 Score=58.89 Aligned_cols=72 Identities=18% Similarity=0.308 Sum_probs=55.3
Q ss_pred cEEEEEcCC-hhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAG-YVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.| .+|.++|..|... |.+|+++++. |.++++.+++||
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~--gAtVtv~~~~---------------------------------t~~L~~~~~~AD 195 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR--NYTVSVCHSK---------------------------------TKDIGSMTRSSK 195 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHHSS
T ss_pred CEEEEEcCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------cccHHHhhccCC
Confidence 479999987 5899999999998 8999999752 245667789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|.-. + ...+++|.+||+.++
T Consensus 196 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 223 (276)
T 3ngx_A 196 IVVVAVGRPGFL---------N-----------REMVTPGSVVIDVGI 223 (276)
T ss_dssp EEEECSSCTTCB---------C-----------GGGCCTTCEEEECCC
T ss_pred EEEECCCCCccc---------c-----------HhhccCCcEEEEecc
Confidence 999999876311 1 134688999887543
No 346
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.77 E-value=0.0029 Score=62.26 Aligned_cols=102 Identities=11% Similarity=0.042 Sum_probs=73.9
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+||+.....+ .+ ..
T Consensus 135 ~~l~g~tvGIiG~G~----------IG~~vA~~l~~~G~~V~~~dr~~~~~~---~~---------------------~~ 180 (315)
T 3pp8_A 135 YTREEFSVGIMGAGV----------LGAKVAESLQAWGFPLRCWSRSRKSWP---GV---------------------ES 180 (315)
T ss_dssp CCSTTCCEEEECCSH----------HHHHHHHHHHTTTCCEEEEESSCCCCT---TC---------------------EE
T ss_pred CCcCCCEEEEEeeCH----------HHHHHHHHHHHCCCEEEEEcCCchhhh---hh---------------------hh
Confidence 467899999999854 789999999999999999998654210 00 00
Q ss_pred eeeecCHHHhcccccEEEEEecc-cccccccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEW-DEFKTLDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h-~~~~~~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
.....++++.++++|+|+++++. ++-+.+=-.+..+.|++.+++||+.+ ++|.+.+
T Consensus 181 ~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL 239 (315)
T 3pp8_A 181 YVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADL 239 (315)
T ss_dssp EESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred hcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHH
Confidence 11125789999999999999885 34444333566788998889999865 5665443
No 347
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.76 E-value=0.0059 Score=60.51 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=33.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eC--CHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVV-DI--SVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~--~~~~v~~l~~ 44 (480)
+||+|+|.|++|.-++..|..+ ++.+|+++ |+ +++....+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-~~vevvaI~d~~~~~~~~a~l~~ 48 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-GKVDIVAINDPFIDLNYMVYMFQ 48 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSSEEEEEECSSSCHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcC-CCcEEEEecCCCCCHHHHHHHhh
Confidence 4999999999999999998876 57887765 53 7777766553
No 348
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.74 E-value=0.0076 Score=62.11 Aligned_cols=110 Identities=17% Similarity=0.198 Sum_probs=74.5
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC------CC
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP------AS 397 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 397 (480)
.-||+|+|+.| ..+.++..|.+.|.+|.+||-.....+.... + ..|+. .|.... ..
T Consensus 8 ~~~~~vIGlG~----------vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~-g------~~~~~-epgl~~~~~~~~~~ 69 (446)
T 4a7p_A 8 SVRIAMIGTGY----------VGLVSGACFSDFGHEVVCVDKDARKIELLHQ-N------VMPIY-EPGLDALVASNVKA 69 (446)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCSTTHHHHTT-T------CCSSC-CTTHHHHHHHHHHT
T ss_pred ceEEEEEcCCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc-C------CCCcc-CCCHHHHHHhhccc
Confidence 46999999988 8899999999999999999987654332221 0 01110 000000 12
Q ss_pred CceeeecCHHHhcccccEEEEEecccc---cccccH-------HHHHHhcCCCCEEEEcCCCCC
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDE---FKTLDY-------QKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~---~~~~~~-------~~~~~~~~~~~~i~D~~~~~~ 451 (480)
.++..++++.+++++||+++++++-|. ....|. +.+...+++..+||+...+..
T Consensus 70 g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~p 133 (446)
T 4a7p_A 70 GRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPV 133 (446)
T ss_dssp TCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCT
T ss_pred CCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Confidence 457788999999999999999965553 222332 456667777789999875543
No 349
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.0048 Score=64.58 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=81.7
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHh-hhccccCCCCCCCCCCCCCCCCCceee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRD-LSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
..+|+|+|+.. ....++..|.++|.+|.+||......+.... . ++ ..++..
T Consensus 10 ~~~IgvIGlG~----------MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~--------~~----------~~gi~~ 61 (497)
T 2p4q_A 10 SADFGLIGLAV----------MGQNLILNAADHGFTVCAYNRTQSKVDHFLANE--------AK----------GKSIIG 61 (497)
T ss_dssp CCSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTT--------TT----------TSSEEC
T ss_pred CCCEEEEeeHH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccc--------cc----------CCCeEE
Confidence 45899999965 8999999999999999999987554322211 0 00 024666
Q ss_pred ecCHHHhccc---ccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEec
Q 011654 403 VWDAYQAAKD---AHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSIG 466 (480)
Q Consensus 403 ~~~~~~a~~~---ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG 466 (480)
+.++.+++++ +|+|++++..+ ..++ -.+.+...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 62 ~~s~~e~v~~l~~aDvVil~Vp~~~~v~~-vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 62 ATSIEDFISKLKRPRKVMLLVKAGAPVDA-LINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp CSSHHHHHHTSCSSCEEEECCCSSHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eCCHHHHHhcCCCCCEEEEEcCChHHHHH-HHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCC
Confidence 7889998887 99999999985 4444 2256667777667999999988642 1334588887654
No 350
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.71 E-value=0.0057 Score=57.83 Aligned_cols=32 Identities=22% Similarity=0.483 Sum_probs=26.4
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEE-EeC
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAV-VDI 34 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~-~D~ 34 (480)
|||+|+|+ |.||..++..+... +++++.+ +|+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEcc
Confidence 79999997 99999999988764 5888874 554
No 351
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.69 E-value=0.0049 Score=59.67 Aligned_cols=108 Identities=14% Similarity=0.151 Sum_probs=74.4
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. .+..++..|.+.|.+|.+||+.....+.... .++....
T Consensus 6 m~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~~ 53 (299)
T 1vpd_A 6 MKVGFIGLGI----------MGKPMSKNLLKAGYSLVVSDRNPEAIADVIA----------------------AGAETAS 53 (299)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSCHHHHHHHHH----------------------TTCEECS
T ss_pred ceEEEECchH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------CCCeecC
Confidence 3899999855 7889999999999999999986433222111 1345667
Q ss_pred CHHHhcccccEEEEEecccc-cccccH--HHHHHhcCCCCEEEEcCCCCCh--HH----HhhcCcEEEE
Q 011654 405 DAYQAAKDAHGVCILTEWDE-FKTLDY--QKIFDNMRKPAYIFDGRNILDV--EK----LREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~~~--~~----~~~~g~~y~~ 464 (480)
+++++++++|+|+++++.+. ++..-. +.+...+++..+|+|..+.... +. +.+.|+.|..
T Consensus 54 ~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 54 TAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD 122 (299)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 88899999999999998654 332111 2455666766799999887642 22 2334777754
No 352
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.67 E-value=0.0027 Score=57.29 Aligned_cols=73 Identities=29% Similarity=0.323 Sum_probs=48.2
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|.|.|+ |.+|..++..|+++ |++|+++++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~~~~~~~~~~~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVV------------GDVLQAADVDKTVAGQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEE------------SCTTSHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEE------------ecCCCHHHHHHHHcCCC
Confidence 68999997 99999999999998 99999999997654321111000000 00100112345677899
Q ss_pred EEEEeccC
Q 011654 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-+...
T Consensus 70 ~vi~~a~~ 77 (206)
T 1hdo_A 70 AVIVLLGT 77 (206)
T ss_dssp EEEECCCC
T ss_pred EEEECccC
Confidence 99999764
No 353
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.65 E-value=0.0023 Score=61.55 Aligned_cols=103 Identities=8% Similarity=0.044 Sum_probs=64.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-cCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-EAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-~aD 80 (480)
++|.|+|+|.+|.+++..|++. |.+|++++|++++.+.+.+.. .. .+.+.+ .++++..+ ++|
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~------------~~--~~~~~~-~~~~~~~~~~~D 182 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERF------------QP--YGNIQA-VSMDSIPLQTYD 182 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHH------------GG--GSCEEE-EEGGGCCCSCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc------------cc--cCCeEE-eeHHHhccCCCC
Confidence 5799999999999999999998 899999999999888776320 00 012322 23343223 899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHH
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||-|+|.+...+ .+++. .. .++++.+|++.++.|...++.
T Consensus 183 ivIn~t~~~~~~~------~~~i~------~~---~l~~~~~v~D~~y~p~~~t~l 223 (272)
T 1p77_A 183 LVINATSAGLSGG------TASVD------AE---ILKLGSAFYDMQYAKGTDTPF 223 (272)
T ss_dssp EEEECCCC-------------CCC------HH---HHHHCSCEEESCCCTTSCCHH
T ss_pred EEEECCCCCCCCC------CCCCC------HH---HcCCCCEEEEeeCCCCcCCHH
Confidence 9999987643210 00010 01 123577888888876652343
No 354
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.65 E-value=0.0046 Score=61.09 Aligned_cols=118 Identities=19% Similarity=0.206 Sum_probs=67.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcC-------CCCeEEE-EeCCHHHHHHHHCCCCCCCCCChHHHHHh-hcCCCEEEec-
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKC-------PKIEVAV-VDISVSRIAAWNGDQLPIYEPGLEDVVTQ-CRGRNLFFST- 70 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~-------~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~l~~~-~~~~~l~~t~- 70 (480)
|+||+|||+|.||..++..|.++. ++.+|++ +|+++++.+. ..+.+.+.. ...+ .+++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~----------id~~~~~~~~~~~~--~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD----------FSLVEALRMKRETG--MLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS----------CCHHHHHHHHHHHS--SCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc----------cCHHHHHhhhccCc--cccCC
Confidence 689999999999999999987641 3666664 5776433211 011111110 0001 1233
Q ss_pred -CHHHHhc--cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccc-hHHHHHHHHHhc
Q 011654 71 -DIEKHVA--EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVK-TAEAIEKILTHN 144 (480)
Q Consensus 71 -d~~~a~~--~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-t~~~l~~~l~~~ 144 (480)
|+++.+. +.|+|++|+|+..+. .+ +.+.+...+..|.-|+.+++-|.. ..++|.+..++.
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~-------------~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~ 133 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDG-------------GE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERN 133 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC-----------------C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHhcCCCCCEEEECCCCcccc-------------hh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhh
Confidence 7777664 589999998865321 12 344455567788888876554433 234455555544
No 355
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.65 E-value=0.006 Score=59.88 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=72.0
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC--EEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKA--KLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
...+|+|+|+.- ....++..|.+.|. +|.+||+.....+...+++. .-
T Consensus 32 ~~~kI~IIG~G~----------mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~--------------------~~ 81 (314)
T 3ggo_A 32 SMQNVLIVGVGF----------MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI--------------------ID 81 (314)
T ss_dssp SCSEEEEESCSH----------HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS--------------------CS
T ss_pred CCCEEEEEeeCH----------HHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC--------------------cc
Confidence 357999999855 78899999999999 99999997543332222210 00
Q ss_pred eeecCHHH-hcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCC
Q 011654 401 NVVWDAYQ-AAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 401 ~~~~~~~~-a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
...+++++ +++++|+||++++-....++ .+++...+++..+|+|..++-.
T Consensus 82 ~~~~~~~~~~~~~aDvVilavp~~~~~~v-l~~l~~~l~~~~iv~d~~Svk~ 132 (314)
T 3ggo_A 82 EGTTSIAKVEDFSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVKG 132 (314)
T ss_dssp EEESCTTGGGGGCCSEEEECSCGGGHHHH-HHHHHHHSCTTCEEEECCSCCT
T ss_pred hhcCCHHHHhhccCCEEEEeCCHHHHHHH-HHHHhhccCCCcEEEECCCCcH
Confidence 34567788 89999999999987765542 3567777877789999987753
No 356
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.62 E-value=0.011 Score=56.85 Aligned_cols=67 Identities=13% Similarity=0.122 Sum_probs=51.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.+|.|||+|-+|.+++..|++. |. +|++++|++++.+.+.+.. + ..+..++. +.++|
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~--G~~~i~v~nRt~~ka~~la~~~-----------------~-~~~~~~~~--~~~~D 177 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALY-----------------G-YAYINSLE--NQQAD 177 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHH-----------------T-CEEESCCT--TCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc-----------------C-Cccchhhh--cccCC
Confidence 4799999999999999999988 76 8999999999888776420 0 12222222 46899
Q ss_pred EEEEeccCCC
Q 011654 81 IVFVSVNTPT 90 (480)
Q Consensus 81 vVii~Vptp~ 90 (480)
+||-|+|...
T Consensus 178 ivInaTp~gm 187 (271)
T 1npy_A 178 ILVNVTSIGM 187 (271)
T ss_dssp EEEECSSTTC
T ss_pred EEEECCCCCc
Confidence 9999988654
No 357
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.61 E-value=0.0048 Score=61.17 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=73.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|++|.+|||..... . . ..
T Consensus 141 ~~l~g~~vgIiG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~ 185 (333)
T 1dxy_A 141 KELGQQTVGVMGTGH----------IGQVAIKLFKGFGAKVIAYDPYPMKG-D-H-----------------------PD 185 (333)
T ss_dssp CCGGGSEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCSS-C-C-----------------------TT
T ss_pred cCCCCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEECCCcchh-h-H-----------------------hc
Confidence 467899999999854 78999999999999999999976432 0 0 01
Q ss_pred eeeecCHHHhcccccEEEEEecccc-ccc-ccHHHHHHhcCCCCEEEEcCC--CCChHHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDE-FKT-LDYQKIFDNMRKPAYIFDGRN--ILDVEKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~-~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~~ 455 (480)
..+ .++++.++++|+|++++.... .+. ++ ....+.|++.+++||+.+ +.+.+.+
T Consensus 186 ~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~-~~~l~~mk~ga~lIn~srg~~vd~~aL 243 (333)
T 1dxy_A 186 FDY-VSLEDLFKQSDVIDLHVPGIEQNTHIIN-EAAFNLMKPGAIVINTARPNLIDTQAM 243 (333)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCGGGTTSBC-HHHHHHSCTTEEEEECSCTTSBCHHHH
T ss_pred ccc-CCHHHHHhcCCEEEEcCCCchhHHHHhC-HHHHhhCCCCcEEEECCCCcccCHHHH
Confidence 233 378999999999999988744 444 34 456688998889999865 4565443
No 358
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.61 E-value=0.005 Score=60.41 Aligned_cols=90 Identities=14% Similarity=0.100 Sum_probs=69.1
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- .+..+++.|...|.+|.+|||......
T Consensus 140 ~~l~g~~vgIIG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~~---------------------------- 181 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGR----------IGQAVAKRALAFGMRVVYHARTPKPLP---------------------------- 181 (311)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCSSS----------------------------
T ss_pred cCCCCCEEEEEEECH----------HHHHHHHHHHHCCCEEEEECCCCcccc----------------------------
Confidence 356889999999854 788999999999999999999754311
Q ss_pred eeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCC
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
+. ..++++.++++|+|+++++.. +.+++=-......|++.+++||+.+
T Consensus 182 ~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~sr 230 (311)
T 2cuk_A 182 YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTAR 230 (311)
T ss_dssp SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 11 347889999999999998775 3444322345678988889999976
No 359
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.60 E-value=0.0038 Score=63.64 Aligned_cols=42 Identities=26% Similarity=0.408 Sum_probs=36.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCC---CeEEEEeCCHHHHHHHHC
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPK---IEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G---~~V~~~D~~~~~v~~l~~ 44 (480)
|+||.|||+|.+|..++..|++. | .+|+++|+++++.+.+.+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~ 45 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQ 45 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHH
Confidence 78999999999999999999987 5 389999999998887664
No 360
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.60 E-value=0.004 Score=59.77 Aligned_cols=100 Identities=13% Similarity=0.114 Sum_probs=66.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-ccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-AEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-~~aD 80 (480)
+++.|+|+|.+|.++|..|++. |.+|++++|++++.+.+.+... . .+.+.. .+.++.. ..+|
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~------------~--~~~~~~-~~~~~~~~~~~D 182 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFA------------H--TGSIQA-LSMDELEGHEFD 182 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTG------------G--GSSEEE-CCSGGGTTCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhh------------c--cCCeeE-ecHHHhccCCCC
Confidence 5799999999999999999998 8999999999998877764210 0 012322 2333322 4899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||-|+|.+...+ .+++. ...++++.++++.++.|..|
T Consensus 183 ivVn~t~~~~~~~------~~~i~---------~~~l~~~~~v~D~~y~p~~t 220 (271)
T 1nyt_A 183 LIINATSSGISGD------IPAIP---------SSLIHPGIYCYDMFYQKGKT 220 (271)
T ss_dssp EEEECCSCGGGTC------CCCCC---------GGGCCTTCEEEESCCCSSCC
T ss_pred EEEECCCCCCCCC------CCCCC---------HHHcCCCCEEEEeccCCcCC
Confidence 9999987643210 01110 12356788899888876444
No 361
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.60 E-value=0.0087 Score=57.93 Aligned_cols=72 Identities=17% Similarity=0.335 Sum_probs=55.9
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|+++++. +.++.+.++.||
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 210 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSK---------------------------------TAHLDEEVNKGD 210 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHhC--CCeEEEEECC---------------------------------cccHHHHhccCC
Confidence 4799999995 899999999998 8999999742 245667789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|.-. . ...+++|.+||+.+.
T Consensus 211 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDVgi 238 (301)
T 1a4i_A 211 ILVVATGQPEMV---------K-----------GEWIKPGAIVIDCGI 238 (301)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECCC
T ss_pred EEEECCCCcccC---------C-----------HHHcCCCcEEEEccC
Confidence 999999876311 1 123578999997654
No 362
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.57 E-value=0.0031 Score=58.63 Aligned_cols=71 Identities=18% Similarity=0.167 Sum_probs=54.1
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCC-CCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQL-PIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~-~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|+|.|.|+ |.+|..++..|++. |++|++++|++++.+.+..... .+.. +.++ .++.+++.++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~------------~Dl~--~~~~~~~~~~ 85 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVV------------ANLE--EDFSHAFASI 85 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEE------------CCTT--SCCGGGGTTC
T ss_pred CeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEE------------cccH--HHHHHHHcCC
Confidence 78999997 99999999999998 9999999999988877664321 1111 1111 4456678899
Q ss_pred cEEEEeccC
Q 011654 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-+...
T Consensus 86 D~vi~~ag~ 94 (236)
T 3e8x_A 86 DAVVFAAGS 94 (236)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999764
No 363
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.57 E-value=0.0038 Score=59.10 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=62.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|++||+|.||..++.. . ++++. +|+ ++. +.. +..+++|+++.++++|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~--~leLv~v~~---~k~-----gel-----------------gv~a~~d~d~lla~pD 62 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G--NFEKIYAYD---RIS-----KDI-----------------PGVVRLDEFQVPSDVS 62 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S--CCSEEEEEC---SSC-----CCC-----------------SSSEECSSCCCCTTCC
T ss_pred ceEEEECcCHHHHHHHhc---C--CcEEEEEEe---ccc-----ccc-----------------CceeeCCHHHHhhCCC
Confidence 899999999999998887 3 67764 566 221 110 2346788888778999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCC---ccchHHHHHHHHHhc
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTV---PVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv---~~gt~~~l~~~l~~~ 144 (480)
+|+.|-+. ..+.+.+.+.|+.|.-|+..|.. ++...++|.+..++.
T Consensus 63 ~VVe~A~~------------------~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~g 111 (253)
T 1j5p_A 63 TVVECASP------------------EAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNS 111 (253)
T ss_dssp EEEECSCH------------------HHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTC
T ss_pred EEEECCCH------------------HHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHC
Confidence 99999531 22333477788888888776643 333344454444443
No 364
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.56 E-value=0.0086 Score=58.94 Aligned_cols=120 Identities=8% Similarity=0.026 Sum_probs=76.5
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHh-----h---hccccCCCCCCCCCCCCC
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRD-----L---SMKKFDWDHPIHLQPMSP 394 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~ 394 (480)
+-++|+|+|+.. ....++..|.++|++|.+||+.....+.... + ...+. -+... ...
T Consensus 5 ~~~kI~vIGaG~----------MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~-~~g~~----~~~ 69 (319)
T 2dpo_A 5 AAGDVLIVGSGL----------VGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS-LKGSL----SAE 69 (319)
T ss_dssp --CEEEEECCSH----------HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC-CCSSS----CHH
T ss_pred CCceEEEEeeCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCc-ccccc----chH
Confidence 346999999855 8899999999999999999997543222110 0 00000 00000 000
Q ss_pred CCCCceeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChHHHhh
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLRE 457 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~ 457 (480)
....+++.++++.+++++||.|++++.-+ +.+.--++++...+++..+|++...-+....+.+
T Consensus 70 ~~~~~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~ 133 (319)
T 2dpo_A 70 EQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT 133 (319)
T ss_dssp HHHHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT
T ss_pred HHhhceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH
Confidence 00124678899999999999999998653 3433334667777777778888877777766543
No 365
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.56 E-value=0.0041 Score=62.66 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=71.7
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+.- -...+++.|...|.+|.+|||..... ..
T Consensus 111 ~~~l~g~tvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~----~~---------------------- 154 (380)
T 2o4c_A 111 GADLAERTYGVVGAGQ----------VGGRLVEVLRGLGWKVLVCDPPRQAR----EP---------------------- 154 (380)
T ss_dssp TCCGGGCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECHHHHHH----ST----------------------
T ss_pred hcccCCCEEEEEeCCH----------HHHHHHHHHHHCCCEEEEEcCChhhh----cc----------------------
Confidence 4567899999999754 78899999999999999999853211 11
Q ss_pred ceeeecCHHHhcccccEEEEEecccc-----ccc-ccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDE-----FKT-LDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~-----~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+.. ..++++.++++|+|++++.... -+. ++ ..+.+.|++.+++||+.+ +.+.+.
T Consensus 155 g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~sRG~vvd~~a 216 (380)
T 2o4c_A 155 DGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLD-EPRLAALRPGTWLVNASRGAVVDNQA 216 (380)
T ss_dssp TSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC-HHHHHTSCTTEEEEECSCGGGBCHHH
T ss_pred Ccc-cCCHHHHHHhCCEEEEeccCccccccchhhhcC-HHHHhhCCCCcEEEECCCCcccCHHH
Confidence 111 2478999999999999987643 223 34 456788998889999875 455443
No 366
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.55 E-value=0.0043 Score=61.68 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=60.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHCCC-CCCCCCC--hHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAV-VDISVSRIAAWNGDQ-LPIYEPG--LEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~-~~~~e~~--l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
+||+|+|+|.+|..++..|..+ ++++|++ .|.+++....+.+-. ...+..- -.++.. ...+.+....+..+...
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~-~~~~~l~v~~~~~~~~~ 80 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKL-FEDAGIPVEGTILDIIE 80 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHH-HHHTTCCCCCBGGGTGG
T ss_pred eEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeec-ccCCeEEECCchHHhcc
Confidence 5999999999999999998875 4678665 466665554443210 0111110 011100 01123444445555567
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHH-HhhCCCCCEEEE
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMI-ANVSNSNKIVVE 125 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i-~~~l~~~~iVi~ 125 (480)
++|+||.|+|... ..+.. ..+++.|..||+
T Consensus 81 ~vDiV~eatg~~~------------------s~~~a~~~~l~aG~~VI~ 111 (343)
T 2yyy_A 81 DADIVVDGAPKKI------------------GKQNLENIYKPHKVKAIL 111 (343)
T ss_dssp GCSEEEECCCTTH------------------HHHHHHHTTTTTTCEEEE
T ss_pred CCCEEEECCCccc------------------cHHHHHHHHHHCCCEEEE
Confidence 9999999976321 01222 367788887775
No 367
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.55 E-value=0.036 Score=53.60 Aligned_cols=105 Identities=15% Similarity=0.092 Sum_probs=66.9
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|+|+ |.||..++..+.+. |++ .++.+|+.+. +.. ..++.+..+++++.+ .
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~~---------------i~G~~vy~sl~el~~~~~ 64 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY--GTK-IVAGVTPGKG-----GME---------------VLGVPVYDTVKEAVAHHE 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TCE---------------ETTEEEESSHHHHHHHSC
T ss_pred CEEEEECCCCCHHHHHHHHHHHc--CCe-EEEEECCCCC-----Cce---------------ECCEEeeCCHHHHhhcCC
Confidence 58999998 99999999999887 888 4456655421 100 024677888888777 8
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
+|++++++|.+ ...+++++..+. .-..+|+..+.++....+++.+..++.+
T Consensus 65 ~Dv~Ii~vp~~---------------~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~a~~~g 115 (288)
T 1oi7_A 65 VDASIIFVPAP---------------AAADAALEAAHA-GIPLIVLITEGIPTLDMVRAVEEIKALG 115 (288)
T ss_dssp CSEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 99999998742 234455554442 1223444444444433456666666653
No 368
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.55 E-value=0.011 Score=57.00 Aligned_cols=118 Identities=14% Similarity=0.019 Sum_probs=76.0
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhh-----h---ccccCCCCCCCCCCCCCC
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDL-----S---MKKFDWDHPIHLQPMSPP 395 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~ 395 (480)
-++|+|+|... ....++..|.+.|++|.+||+.....+..... . ..+...... ....
T Consensus 4 ~~kV~VIGaG~----------mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~-----~~~~ 68 (283)
T 4e12_A 4 ITNVTVLGTGV----------LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADG-----AAQK 68 (283)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTT-----HHHH
T ss_pred CCEEEEECCCH----------HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHH-----HHHH
Confidence 46999999854 88999999999999999999865432211110 0 000000000 0000
Q ss_pred CCCceeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChHHHh
Q 011654 396 ASKQVNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLR 456 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
...++...+++.++++++|.||+++.-+ +.+..-++++...+++..+|++..+.++...+.
T Consensus 69 ~~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la 130 (283)
T 4e12_A 69 ALGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLV 130 (283)
T ss_dssp HHHHCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHH
T ss_pred HHcCeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHH
Confidence 0123566789999999999999998765 233333567777888777899888877766543
No 369
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.53 E-value=0.004 Score=59.26 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=73.3
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCE-EEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCcee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAK-LSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVN 401 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
...+|+|+|... .+..++..|.+.|.+ |.+||+.....+..... .++.
T Consensus 9 ~~m~i~iiG~G~----------mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~---------------------~g~~ 57 (266)
T 3d1l_A 9 EDTPIVLIGAGN----------LATNLAKALYRKGFRIVQVYSRTEESARELAQK---------------------VEAE 57 (266)
T ss_dssp GGCCEEEECCSH----------HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH---------------------TTCE
T ss_pred CCCeEEEEcCCH----------HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH---------------------cCCc
Confidence 346899999855 788899999999998 99999854332211110 1245
Q ss_pred eecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHh
Q 011654 402 VVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLR 456 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
...+++++++++|+|++++..+..+++ .+.+...+++..+|+|+.+.++.+.+.
T Consensus 58 ~~~~~~~~~~~~Dvvi~av~~~~~~~v-~~~l~~~~~~~~ivv~~s~~~~~~~l~ 111 (266)
T 3d1l_A 58 YTTDLAEVNPYAKLYIVSLKDSAFAEL-LQGIVEGKREEALMVHTAGSIPMNVWE 111 (266)
T ss_dssp EESCGGGSCSCCSEEEECCCHHHHHHH-HHHHHTTCCTTCEEEECCTTSCGGGST
T ss_pred eeCCHHHHhcCCCEEEEecCHHHHHHH-HHHHHhhcCCCcEEEECCCCCchHHHH
Confidence 567888889999999999988865432 245666665667999999988766554
No 370
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.51 E-value=0.008 Score=58.19 Aligned_cols=72 Identities=21% Similarity=0.338 Sum_probs=54.6
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHH--HHhcc
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIE--KHVAE 78 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~--~a~~~ 78 (480)
.++.|||.|. +|.++|..|... |.+|+++++.. .+++ +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~~~~T---------------------------------~~l~l~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE--NATVTIVHSGT---------------------------------STEDMIDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTS---------------------------------CHHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCC---------------------------------CCchhhhhhcc
Confidence 4799999876 899999999998 89999998621 1233 56889
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
||+||.+++.|.-. . ...+++|.+||+.++
T Consensus 211 ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYV---------K-----------GEWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCB---------C-----------GGGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCC---------c-----------HHhcCCCcEEEEEec
Confidence 99999999876311 1 134688999997554
No 371
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.51 E-value=0.0027 Score=61.37 Aligned_cols=103 Identities=11% Similarity=0.046 Sum_probs=67.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. .. .+.+.+. ++++...++|
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------~~--~~~~~~~-~~~~l~~~aD 189 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELV------------AA--YGEVKAQ-AFEQLKQSYD 189 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHH------------GG--GSCEEEE-EGGGCCSCEE
T ss_pred CEEEEECchHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHh------------hc--cCCeeEe-eHHHhcCCCC
Confidence 4799999999999999999988 85 9999999999888776420 00 0123332 3344336899
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHH
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+||-|+|.....+ .+.+. ...++++.+|++.+..|..| ..+
T Consensus 190 iIInaTp~gm~~~------~~~l~---------~~~l~~~~~V~DlvY~P~~T-~ll 230 (281)
T 3o8q_A 190 VIINSTSASLDGE------LPAID---------PVIFSSRSVCYDMMYGKGYT-VFN 230 (281)
T ss_dssp EEEECSCCCC----------CSCC---------GGGEEEEEEEEESCCCSSCC-HHH
T ss_pred EEEEcCcCCCCCC------CCCCC---------HHHhCcCCEEEEecCCCccC-HHH
Confidence 9999987653210 01110 12456788888888776444 444
No 372
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.50 E-value=0.0061 Score=60.33 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=72.8
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- ....+++.|...|++|.+|||..... . . ..
T Consensus 142 ~~l~g~~vgIiG~G~----------IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~ 186 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGR----------IGRVAAQIFHGMGATVIGEDVFEIKG-I-E-----------------------DY 186 (331)
T ss_dssp CCGGGSEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCCS-C-T-----------------------TT
T ss_pred cCCCCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEECCCccHH-H-H-----------------------hc
Confidence 356789999999854 78899999999999999999976432 0 0 01
Q ss_pred eeeecCHHHhcccccEEEEEeccc-cccc-ccHHHHHHhcCCCCEEEEcCC--CCChHH
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWD-EFKT-LDYQKIFDNMRKPAYIFDGRN--ILDVEK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~-~~~~-~~~~~~~~~~~~~~~i~D~~~--~~~~~~ 454 (480)
+.+ .++++.++++|+|++++... +.+. ++ ....+.|++.+++||+.+ +.+.+.
T Consensus 187 ~~~-~~l~ell~~aDvV~~~~p~t~~t~~li~-~~~l~~mk~ga~lin~srg~~vd~~a 243 (331)
T 1xdw_A 187 CTQ-VSLDEVLEKSDIITIHAPYIKENGAVVT-RDFLKKMKDGAILVNCARGQLVDTEA 243 (331)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTTCCSBC-HHHHHTSCTTEEEEECSCGGGBCHHH
T ss_pred ccc-CCHHHHHhhCCEEEEecCCchHHHHHhC-HHHHhhCCCCcEEEECCCcccccHHH
Confidence 223 37899999999999988764 3444 34 456678998889999976 556543
No 373
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.49 E-value=0.0035 Score=62.26 Aligned_cols=93 Identities=22% Similarity=0.149 Sum_probs=67.9
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCCh-HHHHHhhhccccCCCCCCCCCCCCCCCCCcee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTE-DQIQRDLSMKKFDWDHPIHLQPMSPPASKQVN 401 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
++.+|+|+|+.. .+..++..|.+.|.+|.+||+.... .+....+ ++.
T Consensus 15 ~~~~I~IIG~G~----------mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~----------------------G~~ 62 (338)
T 1np3_A 15 QGKKVAIIGYGS----------QGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH----------------------GLK 62 (338)
T ss_dssp HTSCEEEECCSH----------HHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT----------------------TCE
T ss_pred cCCEEEEECchH----------HHHHHHHHHHHCcCEEEEEECChHHHHHHHHHC----------------------CCE
Confidence 467899999854 8889999999999999999997654 2222221 234
Q ss_pred eecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCC
Q 011654 402 VVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.. +..++++++|+|+++++.....++--+++...+++.++|+|+.+
T Consensus 63 ~~-~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~~g 108 (338)
T 1np3_A 63 VA-DVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFAHG 108 (338)
T ss_dssp EE-CHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEESCC
T ss_pred Ec-cHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 44 78889999999999998876543211255566776679999865
No 374
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.48 E-value=0.0099 Score=61.36 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=72.9
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC------CCC
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP------ASK 398 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 398 (480)
.||+|+|+.| ....++..|.+.|.+|.+||......+.... + ..|+. .+.... ...
T Consensus 3 mkI~VIG~G~----------vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~-g------~~~i~-e~gl~~~l~~~~~~~ 64 (450)
T 3gg2_A 3 LDIAVVGIGY----------VGLVSATCFAELGANVRCIDTDRNKIEQLNS-G------TIPIY-EPGLEKMIARNVKAG 64 (450)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T------CSCCC-STTHHHHHHHHHHTT
T ss_pred CEEEEECcCH----------HHHHHHHHHHhcCCEEEEEECCHHHHHHHHc-C------CCccc-CCCHHHHHHhhcccC
Confidence 4899999988 8899999999999999999986433222111 0 00110 000000 023
Q ss_pred ceeeecCHHHhcccccEEEEEecccc----------cccccHHHHHHhcCCCCEEEEcCCCCC
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDE----------FKTLDYQKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~----------~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
++..++++.++++++|+++++++-+. .++ -.+.+...+++..+|++...+..
T Consensus 65 ~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~-v~~~i~~~l~~g~iVV~~STv~p 126 (450)
T 3gg2_A 65 RLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLD-AARSIGRAMSRYILIVTKSTVPV 126 (450)
T ss_dssp SEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHH-HHHHHHHHCCSCEEEEECSCCCT
T ss_pred cEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHH-HHHHHHhhCCCCCEEEEeeeCCC
Confidence 57788899999999999999997762 222 23466677777789999987553
No 375
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.48 E-value=0.014 Score=61.05 Aligned_cols=114 Identities=19% Similarity=0.211 Sum_probs=69.9
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHH-HHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVAVVDISVS-RIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~-~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+++|.|||+|-.|.+ +|..|.++ |++|+++|..+. ..+.|.+...+ +..-.+.+ .+.+
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~-----------------~~~g~~~~-~~~~ 81 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNSVTQHLTALGAQ-----------------IYFHHRPE-NVLD 81 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCE-----------------EESSCCGG-GGTT
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC--CCeEEEEECCCCHHHHHHHHCCCE-----------------EECCCCHH-HcCC
Confidence 368999999999996 89999998 999999998643 23344432111 11112333 3678
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHH----------HHHhhCCCCCEEEEecCCccchHHH-HHHHHHhcC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----------MIANVSNSNKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~----------~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||++-.-|. |...+..+.+ -+...++...+|.+..|..-.||.. +..+|++.+
T Consensus 82 ~d~vV~Spgi~~-----------~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 82 ASVVVVSTAISA-----------DNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp CSEEEECTTSCT-----------TCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCC-----------CCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 999998743332 1122333322 2333444445777777877666665 567887654
No 376
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.47 E-value=0.015 Score=60.41 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=72.6
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+.- -...+++.|...|++|.+|||.......... .
T Consensus 272 g~~L~GktVgIIG~G~----------IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~----------------------~ 319 (494)
T 3d64_A 272 DVMIAGKIAVVAGYGD----------VGKGCAQSLRGLGATVWVTEIDPICALQAAM----------------------E 319 (494)
T ss_dssp CCCCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECSCHHHHHHHHT----------------------T
T ss_pred ccccCCCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCChHhHHHHHH----------------------c
Confidence 4468999999999744 7788999999999999999998653211111 1
Q ss_pred ceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC---CChHHH
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI---LDVEKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~ 455 (480)
+..+ .+++++++.+|+|++++.-..+ ++ .+..+.|++.++|+|+-+. +|.+.+
T Consensus 320 G~~~-~~l~ell~~aDiVi~~~~t~~l--I~-~~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 320 GYRV-VTMEYAADKADIFVTATGNYHV--IN-HDHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp TCEE-CCHHHHTTTCSEEEECSSSSCS--BC-HHHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred CCEe-CCHHHHHhcCCEEEECCCcccc--cC-HHHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 2232 4789999999999999832222 44 3556789988899998653 365555
No 377
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.46 E-value=0.013 Score=56.19 Aligned_cols=99 Identities=16% Similarity=0.110 Sum_probs=65.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh-ccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV-AEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~-~~a 79 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|++++.+.+.+... .+.+.+. ++++.- .++
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~---------------~~~~~~~-~~~~l~~~~~ 182 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA--GPSELVIANRDMAKALALRNELD---------------HSRLRIS-RYEALEGQSF 182 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHC---------------CTTEEEE-CSGGGTTCCC
T ss_pred CEEEEECccHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhc---------------cCCeeEe-eHHHhcccCC
Confidence 4799999999999999999998 85 99999999999888764210 0123332 222311 689
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+||-|+|.....+ .+.+. ...++++.+|++....|..|
T Consensus 183 DivInaTp~gm~~~------~~~i~---------~~~l~~~~~V~DlvY~P~~T 221 (272)
T 3pwz_A 183 DIVVNATSASLTAD------LPPLP---------ADVLGEAALAYELAYGKGLT 221 (272)
T ss_dssp SEEEECSSGGGGTC------CCCCC---------GGGGTTCSEEEESSCSCCSC
T ss_pred CEEEECCCCCCCCC------CCCCC---------HHHhCcCCEEEEeecCCCCC
Confidence 99999987543210 11110 12456788888877665444
No 378
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.45 E-value=0.0042 Score=53.83 Aligned_cols=108 Identities=16% Similarity=0.133 Sum_probs=73.0
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.++|+|+|+|-++ ++++..+++.|.+.|++|...||....+++ .++...
T Consensus 13 p~~IavIGas~~~------g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-------------------------~G~~~~ 61 (145)
T 2duw_A 13 TRTIALVGASDKP------DRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-------------------------LGQQGY 61 (145)
T ss_dssp CCCEEEESCCSCT------TSHHHHHHHHHHHHTCCEEEECSSSTTSEE-------------------------TTEECC
T ss_pred CCEEEEECcCCCC------CChHHHHHHHHHHCCCEEEEeCCccccccc-------------------------CCeecc
Confidence 5789999998766 468899999999999999999997521111 134455
Q ss_pred cCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH---HHhhcCcEEEEe
Q 011654 404 WDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE---KLREIGFIVYSI 465 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y~~i 465 (480)
.|+.+..+..|++++++.-+.-.++ ..++.+. ....++++. +.+..+ ..++.|++|.|-
T Consensus 62 ~sl~el~~~~Dlvii~vp~~~v~~v-~~~~~~~-g~~~i~i~~-~~~~~~l~~~a~~~Gi~~igp 123 (145)
T 2duw_A 62 ATLADVPEKVDMVDVFRNSEAAWGV-AQEAIAI-GAKTLWLQL-GVINEQAAVLAREAGLSVVMD 123 (145)
T ss_dssp SSTTTCSSCCSEEECCSCSTHHHHH-HHHHHHH-TCCEEECCT-TCCCHHHHHHHHTTTCEEECS
T ss_pred CCHHHcCCCCCEEEEEeCHHHHHHH-HHHHHHc-CCCEEEEcC-ChHHHHHHHHHHHcCCEEEcC
Confidence 6777777789999999984332221 2334442 445577776 444543 345679999663
No 379
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.44 E-value=0.012 Score=57.91 Aligned_cols=100 Identities=9% Similarity=0.143 Sum_probs=72.2
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCC----CEEEEECCCCC--hHHHHHhhhccccCCCCCCCCCCCCCCCC
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDK----AKLSIYDPQVT--EDQIQRDLSMKKFDWDHPIHLQPMSPPAS 397 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g----~~V~~~DP~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
..+|+|+|+.. ....++..|.+.| .+|.+||+... ..+....+
T Consensus 22 ~mkI~iIG~G~----------mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~--------------------- 70 (322)
T 2izz_A 22 SMSVGFIGAGQ----------LAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM--------------------- 70 (322)
T ss_dssp CCCEEEESCSH----------HHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH---------------------
T ss_pred CCEEEEECCCH----------HHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc---------------------
Confidence 44899999854 8899999999999 79999998754 21111221
Q ss_pred CceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHh
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLR 456 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
++....+..++++++|+|++++....+++. ...+...+++..+|+|..+-++.+.+.
T Consensus 71 -G~~~~~~~~e~~~~aDvVilav~~~~~~~v-l~~l~~~l~~~~ivvs~s~gi~~~~l~ 127 (322)
T 2izz_A 71 -GVKLTPHNKETVQHSDVLFLAVKPHIIPFI-LDEIGADIEDRHIVVSCAAGVTISSIE 127 (322)
T ss_dssp -TCEEESCHHHHHHHCSEEEECSCGGGHHHH-HHHHGGGCCTTCEEEECCTTCCHHHHH
T ss_pred -CCEEeCChHHHhccCCEEEEEeCHHHHHHH-HHHHHhhcCCCCEEEEeCCCCCHHHHH
Confidence 355667888999999999999985544442 235555566566999998888765433
No 380
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.43 E-value=0.0097 Score=57.04 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=68.8
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC--EEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKA--KLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
++|+|+|+.. .+..++..|.+.|. +|.+||+.....+....++ . ....
T Consensus 2 ~~I~iIG~G~----------mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g------------------~--~~~~ 51 (281)
T 2g5c_A 2 QNVLIVGVGF----------MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG------------------I--IDEG 51 (281)
T ss_dssp CEEEEESCSH----------HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT------------------S--CSEE
T ss_pred cEEEEEecCH----------HHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCC------------------C--cccc
Confidence 4799999855 88899999999998 9999999754332222221 0 0013
Q ss_pred ecCHHHhcc-cccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCC
Q 011654 403 VWDAYQAAK-DAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 403 ~~~~~~a~~-~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
.+++.++++ ++|+|+++++.....++ ..++...+++..+|+|..+.-.
T Consensus 52 ~~~~~~~~~~~aDvVilavp~~~~~~v-~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 52 TTSIAKVEDFSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp ESCGGGGGGTCCSEEEECSCHHHHHHH-HHHHHHHSCTTCEEEECCSCCT
T ss_pred cCCHHHHhcCCCCEEEEcCCHHHHHHH-HHHHHhhCCCCcEEEECCCCcH
Confidence 457778899 99999999988765542 2456667777779999887654
No 381
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.42 E-value=0.011 Score=56.94 Aligned_cols=53 Identities=28% Similarity=0.470 Sum_probs=44.7
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|+++++. +.++.+.+++||
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 204 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRF---------------------------------TKNLRHHVENAD 204 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSS---------------------------------CSCHHHHHHHCS
T ss_pred CEEEEECCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhccCC
Confidence 4799999996 799999999988 8999999742 245667789999
Q ss_pred EEEEeccCC
Q 011654 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||.+++.|
T Consensus 205 IVI~Avg~p 213 (288)
T 1b0a_A 205 LLIVAVGKP 213 (288)
T ss_dssp EEEECSCCT
T ss_pred EEEECCCCc
Confidence 999999876
No 382
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.40 E-value=0.0065 Score=57.56 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=30.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~ 36 (480)
.+|.|||+|.+|..+|..|+.. |. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCCC
Confidence 4899999999999999999998 76 899999986
No 383
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.39 E-value=0.0082 Score=62.42 Aligned_cols=114 Identities=10% Similarity=0.151 Sum_probs=78.5
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. ....++..|.+.|.+|.+||+.....+...... + ..++...
T Consensus 5 ~~~IgvIG~G~----------mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~--------~----------~~gi~~~ 56 (474)
T 2iz1_A 5 QANFGVVGMAV----------MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEH--------Q----------DKNLVFT 56 (474)
T ss_dssp TBSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT--------T----------TSCEEEC
T ss_pred CCcEEEEeeHH----------HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhC--------c----------CCCeEEe
Confidence 45899999855 889999999999999999998644322111100 0 0246667
Q ss_pred cCHHHhccc---ccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChH--H----HhhcCcEEEEec
Q 011654 404 WDAYQAAKD---AHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVE--K----LREIGFIVYSIG 466 (480)
Q Consensus 404 ~~~~~a~~~---ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~--~----~~~~g~~y~~iG 466 (480)
.++++++++ +|+|+++++.+ ..++ -.+.+...+++..+|||+.+..... + +.+.|+.|.+.+
T Consensus 57 ~s~~e~v~~l~~aDvVilavp~~~~v~~-vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~p 128 (474)
T 2iz1_A 57 KTLEEFVGSLEKPRRIMLMVQAGAATDA-TIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTG 128 (474)
T ss_dssp SSHHHHHHTBCSSCEEEECCCTTHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEE
T ss_pred CCHHHHHhhccCCCEEEEEccCchHHHH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCC
Confidence 889888776 99999999985 3443 2345666776667999999887432 1 223477776654
No 384
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.38 E-value=0.035 Score=56.48 Aligned_cols=118 Identities=11% Similarity=0.115 Sum_probs=78.6
Q ss_pred HHHHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCC
Q 011654 313 RIVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPM 392 (480)
Q Consensus 313 ~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (480)
-+.+..+..+.+++|+|+|..- -...+++.|+..|++|.++|+..........
T Consensus 209 gi~rat~~~L~GktV~ViG~G~----------IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~----------------- 261 (435)
T 3gvp_A 209 GLKRTTDMMFGGKQVVVCGYGE----------VGKGCCAALKAMGSIVYVTEIDPICALQACM----------------- 261 (435)
T ss_dssp HHHHHHCCCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------------
T ss_pred HHHHhhCceecCCEEEEEeeCH----------HHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-----------------
Confidence 3344445567999999999854 7889999999999999999975321111111
Q ss_pred CCCCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC---CChHHHhhcCcEEEEec
Q 011654 393 SPPASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI---LDVEKLREIGFIVYSIG 466 (480)
Q Consensus 393 ~~~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~~g~~y~~iG 466 (480)
.+.. ..+++++++++|+++.++..+.. ++.+. .+.|++.++|++.-+- ++.+.+...++.+..+.
T Consensus 262 -----~G~~-v~~Leeal~~ADIVi~atgt~~l--I~~e~-l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir 329 (435)
T 3gvp_A 262 -----DGFR-LVKLNEVIRQVDIVITCTGNKNV--VTREH-LDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVR 329 (435)
T ss_dssp -----TTCE-ECCHHHHTTTCSEEEECSSCSCS--BCHHH-HHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEE
T ss_pred -----cCCE-eccHHHHHhcCCEEEECCCCccc--CCHHH-HHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEE
Confidence 1122 24789999999999997654432 44444 5678888899998553 33344444466666654
No 385
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.38 E-value=0.011 Score=60.46 Aligned_cols=111 Identities=15% Similarity=0.057 Sum_probs=70.8
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCC--CCCC-CCCCCC
Q 011654 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIH--LQPM-SPPASK 398 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~ 398 (480)
.+-.+|+|+|+.| ..+.++..|.+ |.+|.+||......+.... . ..|+. ..+. ......
T Consensus 34 ~~~mkIaVIGlG~----------mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~---g----~~~i~e~~l~~ll~~~~~ 95 (432)
T 3pid_A 34 SEFMKITISGTGY----------VGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQ---K----ISPIVDKEIQEYLAEKPL 95 (432)
T ss_dssp -CCCEEEEECCSH----------HHHHHHHHHHT-TSEEEEECSCHHHHHHHHT---T----CCSSCCHHHHHHHHHSCC
T ss_pred cCCCEEEEECcCH----------HHHHHHHHHHc-CCeEEEEecCHHHhhHHhc---c----CCccccccHHHHHhhccC
Confidence 3556999999988 88999998887 9999999986443222111 0 00100 0000 000013
Q ss_pred ceeeecCHHHhcccccEEEEEeccccc---cccc-------HHHHHHhcCCCCEEEEcCCCCC
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDEF---KTLD-------YQKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~~---~~~~-------~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
++..++++++++++||+|+++++-+.= ...| .+.+.. +++..+|||...+..
T Consensus 96 ~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~p 157 (432)
T 3pid_A 96 NFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPV 157 (432)
T ss_dssp CEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCT
T ss_pred CeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCCh
Confidence 577888999999999999999877621 0122 245666 777779999776654
No 386
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.37 E-value=0.009 Score=57.81 Aligned_cols=109 Identities=12% Similarity=0.099 Sum_probs=74.4
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. .+..+++.|.+.|.+|.+||+.....+ .+. ..++...
T Consensus 4 ~~~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~~~~~~~~---~~~-------------------~~g~~~~ 51 (301)
T 3cky_A 4 SIKIGFIGLGA----------MGKPMAINLLKEGVTVYAFDLMEANVA---AVV-------------------AQGAQAC 51 (301)
T ss_dssp CCEEEEECCCT----------THHHHHHHHHHTTCEEEEECSSHHHHH---HHH-------------------TTTCEEC
T ss_pred CCEEEEECccH----------HHHHHHHHHHHCCCeEEEEeCCHHHHH---HHH-------------------HCCCeec
Confidence 35899999854 788999999999999999998643221 111 0134566
Q ss_pred cCHHHhcccccEEEEEecccc-cccccH--HHHHHhcCCCCEEEEcCCCCC--hHHH----hhcCcEEEE
Q 011654 404 WDAYQAAKDAHGVCILTEWDE-FKTLDY--QKIFDNMRKPAYIFDGRNILD--VEKL----REIGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~~--~~~~----~~~g~~y~~ 464 (480)
++++++++++|+|++++..+. .+..-. +.+...+++..+|+|..+... .+.+ .+.|+.|..
T Consensus 52 ~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~ 121 (301)
T 3cky_A 52 ENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD 121 (301)
T ss_dssp SSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 788999999999999996544 333211 145556666679999988873 2222 234777754
No 387
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.37 E-value=0.017 Score=59.73 Aligned_cols=103 Identities=15% Similarity=0.071 Sum_probs=73.5
Q ss_pred cCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 319 FNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+.- -...+++.|...|++|.+|||.......... .
T Consensus 252 ~~~l~GktVgIIG~G~----------IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~----------------------~ 299 (479)
T 1v8b_A 252 DFLISGKIVVICGYGD----------VGKGCASSMKGLGARVYITEIDPICAIQAVM----------------------E 299 (479)
T ss_dssp CCCCTTSEEEEECCSH----------HHHHHHHHHHHHTCEEEEECSCHHHHHHHHT----------------------T
T ss_pred ccccCCCEEEEEeeCH----------HHHHHHHHHHhCcCEEEEEeCChhhHHHHHH----------------------c
Confidence 4468999999999743 6788999999999999999998654211111 1
Q ss_pred ceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC---CChHHHhh
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI---LDVEKLRE 457 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~~ 457 (480)
++. ..+++++++.+|+|++++.-..+ ++- +..+.|++.++|+|+.+. ++.+.+.+
T Consensus 300 g~~-~~~l~ell~~aDiVi~~~~t~~l--I~~-~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 300 GFN-VVTLDEIVDKGDFFITCTGNVDV--IKL-EHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp TCE-ECCHHHHTTTCSEEEECCSSSSS--BCH-HHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CCE-ecCHHHHHhcCCEEEECCChhhh--cCH-HHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 222 24789999999999999743332 443 455789988899998764 45555544
No 388
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.32 E-value=0.0035 Score=60.13 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=50.1
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.| .|.+|..++..|++. +|++|++.++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~------------~D~~d~~~l~~~~~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQ------------LDYFNQESMVEAFKGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEE------------cCCCCHHHHHHHHhCCC
Confidence 7899999 599999999999875 379999999998765544332111100 11111123455678999
Q ss_pred EEEEeccC
Q 011654 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||.|.+.
T Consensus 68 ~vi~~a~~ 75 (289)
T 3e48_A 68 TVVFIPSI 75 (289)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998753
No 389
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.31 E-value=0.008 Score=61.76 Aligned_cols=66 Identities=27% Similarity=0.353 Sum_probs=48.2
Q ss_pred EEEEEcCChhHHHHHHHHHHc--------CCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHH
Q 011654 3 KICCIGAGYVGGPTMAVIALK--------CPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIE 73 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~--------~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~ 73 (480)
||+|||+|.||..++..|.++ +++.+|. ++|+++++.+.+.. ...+++|++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------------------~~~~~~d~~ 71 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------------------GLPLTTNPF 71 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------------------TCCEESCTH
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------------------cCcccCCHH
Confidence 799999999999998877531 2355654 57999887665532 123577888
Q ss_pred HHhc--cCcEEEEeccC
Q 011654 74 KHVA--EADIVFVSVNT 88 (480)
Q Consensus 74 ~a~~--~aDvVii~Vpt 88 (480)
+.+. +.|+|++|+|+
T Consensus 72 ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 72 DVVDDPEIDIVVELIGG 88 (444)
T ss_dssp HHHTCTTCCEEEECCCS
T ss_pred HHhcCCCCCEEEEcCCC
Confidence 8775 57999999875
No 390
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.30 E-value=0.016 Score=55.76 Aligned_cols=71 Identities=23% Similarity=0.332 Sum_probs=54.4
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|++.++. |.++++.+++||
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~--gAtVtv~h~~---------------------------------t~~L~~~~~~AD 205 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNA--GATVSVCHIK---------------------------------TKDLSLYTRQAD 205 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhhcCC
Confidence 4799999876 799999999998 8899998752 235667789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-. . ...+++|.+||+..
T Consensus 206 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDVg 232 (285)
T 3p2o_A 206 LIIVAAGCVNLL---------R-----------SDMVKEGVIVVDVG 232 (285)
T ss_dssp EEEECSSCTTCB---------C-----------GGGSCTTEEEEECC
T ss_pred EEEECCCCCCcC---------C-----------HHHcCCCeEEEEec
Confidence 999999865211 1 13468899888643
No 391
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.29 E-value=0.017 Score=55.40 Aligned_cols=71 Identities=25% Similarity=0.419 Sum_probs=54.3
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |.+|++.++. |.++++.+++||
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 206 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA--KATVTTCHRF---------------------------------TTDLKSHTTKAD 206 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHhcccCC
Confidence 4799999876 799999999998 8899998742 235667789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-. . ...+++|.+||+.+
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvg 233 (285)
T 3l07_A 207 ILIVAVGKPNFI---------T-----------ADMVKEGAVVIDVG 233 (285)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECC
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCcEEEEec
Confidence 999999865211 1 13468899888644
No 392
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=96.29 E-value=0.015 Score=60.66 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=78.9
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. ....++..|.+.|.+|.+||......+....-. ++ + .++....
T Consensus 3 m~IgvIG~G~----------mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~-------~~--------g--~gi~~~~ 55 (482)
T 2pgd_A 3 ADIALIGLAV----------MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE-------AK--------G--TKVLGAH 55 (482)
T ss_dssp BSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT-------TT--------T--SSCEECS
T ss_pred CeEEEEChHH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcc-------cc--------C--CCeEEeC
Confidence 4799999865 889999999999999999998654322211100 00 0 2455667
Q ss_pred CHHHhcc---cccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChH------HHhhcCcEEEEec
Q 011654 405 DAYQAAK---DAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVE------KLREIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~---~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~------~~~~~g~~y~~iG 466 (480)
+++++++ ++|+|+++++.+ ..++ -.+.+...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 56 ~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 56 SLEEMVSKLKKPRRIILLVKAGQAVDN-FIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp SHHHHHHHBCSSCEEEECSCTTHHHHH-HHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHhhccCCCEEEEeCCChHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCC
Confidence 8888764 899999999986 4444 2356777777667999998887532 1234577777654
No 393
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.28 E-value=0.018 Score=55.33 Aligned_cols=72 Identities=25% Similarity=0.382 Sum_probs=54.7
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|+.. |.+|++..+. |.++++.+++||
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~--gAtVtv~hs~---------------------------------T~~L~~~~~~AD 206 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLG--GCTVTVTHRF---------------------------------TRDLADHVSRAD 206 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------CcCHHHHhccCC
Confidence 4799999875 899999999998 8899998641 235667789999
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|.-. . ...+++|.+||+.+.
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 234 (286)
T 4a5o_A 207 LVVVAAGKPGLV---------K-----------GEWIKEGAIVIDVGI 234 (286)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECCS
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCeEEEEecc
Confidence 999999866211 1 134688999987543
No 394
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.25 E-value=0.017 Score=57.25 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=31.2
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eC--CHHHHHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVV-DI--SVSRIAAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~--~~~~v~~l~ 43 (480)
+||+|+|+|++|.-++..|..+ ++.+|+.+ |. +++....+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-p~vevvaI~d~~~~~~~~~~ll 47 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-EDVELVAVNDPFITTDYMTYMF 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCC-CCeEEEEEECCCCCHHHHHHhh
Confidence 4999999999999999998875 57787765 42 566555553
No 395
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.23 E-value=0.001 Score=61.51 Aligned_cols=68 Identities=13% Similarity=0.220 Sum_probs=46.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-cC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA-EA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~-~a 79 (480)
++|+|||+|.+|..++..+.... |++++ ++|.|+++......+ . .+...+++++.++ +.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~g-v-----------------~V~~~~dl~ell~~~I 141 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRG-G-----------------VIEHVDLLPQRVPGRI 141 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETT-E-----------------EEEEGGGHHHHSTTTC
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcC-C-----------------eeecHHhHHHHHHcCC
Confidence 58999999999999998643333 67755 579988765432221 0 1223567777654 58
Q ss_pred cEEEEeccC
Q 011654 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+|++|+|+
T Consensus 142 D~ViIA~Ps 150 (211)
T 2dt5_A 142 EIALLTVPR 150 (211)
T ss_dssp CEEEECSCH
T ss_pred CEEEEeCCc
Confidence 999999885
No 396
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.19 E-value=0.0073 Score=58.55 Aligned_cols=70 Identities=21% Similarity=0.267 Sum_probs=48.4
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.| .|++|..++..|.++ |++|+++++++...+ +. + ..+ ..+.+. ..++.++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~-~-~~~------------~~~Dl~-~~~~~~~~~~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN-D-YEY------------RVSDYT-LEDLINQLNDV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC-------C-CEE------------EECCCC-HHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC-c-eEE------------EEcccc-HHHHHHhhcCC
Confidence 37899999 699999999999998 999999999854433 32 1 110 012333 34556677899
Q ss_pred cEEEEeccC
Q 011654 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-|...
T Consensus 64 d~Vih~a~~ 72 (311)
T 3m2p_A 64 DAVVHLAAT 72 (311)
T ss_dssp SEEEECCCC
T ss_pred CEEEEcccc
Confidence 999998753
No 397
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.16 E-value=0.042 Score=56.08 Aligned_cols=103 Identities=15% Similarity=0.102 Sum_probs=70.9
Q ss_pred HHHHHHHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCC
Q 011654 310 FVNRIVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHL 389 (480)
Q Consensus 310 ~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ 389 (480)
++.-+.+..+..+.+++|+|+|..- -...+++.|...|++|.+||+..........
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G~----------IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~-------------- 288 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYGD----------VGKGSAQSLAGAGARVKVTEVDPICALQAAM-------------- 288 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSHHHHHHHHH--------------
T ss_pred HHHHHHHhcCCcccCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEEeCCcchhhHHHh--------------
Confidence 3344445455678999999999743 6788999999999999999763221111111
Q ss_pred CCCCCCCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCC
Q 011654 390 QPMSPPASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.++.+ .+++++++.+|+|+..+..+.. ++- +..+.|++.++|+++-+
T Consensus 289 --------~G~~v-v~LeElL~~ADIVv~atgt~~l--I~~-e~l~~MK~GAILINvGR 335 (464)
T 3n58_A 289 --------DGFEV-VTLDDAASTADIVVTTTGNKDV--ITI-DHMRKMKDMCIVGNIGH 335 (464)
T ss_dssp --------TTCEE-CCHHHHGGGCSEEEECCSSSSS--BCH-HHHHHSCTTEEEEECSS
T ss_pred --------cCcee-ccHHHHHhhCCEEEECCCCccc--cCH-HHHhcCCCCeEEEEcCC
Confidence 12233 4789999999999998765432 344 44578898889988755
No 398
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=96.16 E-value=0.011 Score=57.11 Aligned_cols=94 Identities=18% Similarity=0.216 Sum_probs=63.6
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeecC
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+.. .+..++..|.+.|.+|.+||+.....+.... .++...++
T Consensus 2 ~i~iiG~G~----------mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~~~ 49 (296)
T 2gf2_A 2 PVGFIGLGN----------MGNPMAKNLMKHGYPLIIYDVFPDACKEFQD----------------------AGEQVVSS 49 (296)
T ss_dssp CEEEECCST----------THHHHHHHHHHTTCCEEEECSSTHHHHHHHT----------------------TTCEECSS
T ss_pred eEEEEeccH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------------------cCCeecCC
Confidence 699999855 7889999999999999999986543222111 23556678
Q ss_pred HHHhcccccEEEEEecccc-cccccHHH---HHHhcCCCCEEEEcCCCCChH
Q 011654 406 AYQAAKDAHGVCILTEWDE-FKTLDYQK---IFDNMRKPAYIFDGRNILDVE 453 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~h~~-~~~~~~~~---~~~~~~~~~~i~D~~~~~~~~ 453 (480)
+.++++++|+|++++..+. .++. ... +...+++..+|+|..+ +++.
T Consensus 50 ~~~~~~~~Dvvi~~vp~~~~~~~v-~~~~~~~~~~l~~~~~vv~~s~-~~~~ 99 (296)
T 2gf2_A 50 PADVAEKADRIITMLPTSINAIEA-YSGANGILKKVKKGSLLIDSST-IDPA 99 (296)
T ss_dssp HHHHHHHCSEEEECCSSHHHHHHH-HHSTTSGGGTCCTTCEEEECSC-CCHH
T ss_pred HHHHHhcCCEEEEeCCCHHHHHHH-HhCchhHHhcCCCCCEEEECCC-CCHH
Confidence 8999999999999986543 3221 111 2224555669999544 4443
No 399
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.06 E-value=0.0092 Score=57.60 Aligned_cols=66 Identities=9% Similarity=0.176 Sum_probs=50.8
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|++++.+.+.+.. .....+++.+ + ++|
T Consensus 123 k~vlvlGaGGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~~~------------------~~~~~~~l~~-l-~~D 180 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYGEF------------------KVISYDELSN-L-KGD 180 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCTTS------------------EEEEHHHHTT-C-CCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHhc------------------CcccHHHHHh-c-cCC
Confidence 4799999999999999999998 87 8999999999998887531 0111122333 4 799
Q ss_pred EEEEeccCC
Q 011654 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||-|+|..
T Consensus 181 ivInaTp~G 189 (282)
T 3fbt_A 181 VIINCTPKG 189 (282)
T ss_dssp EEEECSSTT
T ss_pred EEEECCccC
Confidence 999998754
No 400
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.06 E-value=0.0037 Score=62.75 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=31.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|||.|||+|..|+.+|..|+++ |++|+++|+++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 8999999999999999999998 99999999864
No 401
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.05 E-value=0.02 Score=58.85 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=69.2
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCC------CCc
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPA------SKQ 399 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 399 (480)
+|+|+|+.| ....++..|.+.|.+|.++|......+. +.... -|+. .+..... ...
T Consensus 2 kI~VIG~G~----------vG~~~A~~la~~G~~V~~~d~~~~~~~~---l~~~~----~~i~-e~~l~~~~~~~~~~g~ 63 (436)
T 1mv8_A 2 RISIFGLGY----------VGAVCAGCLSARGHEVIGVDVSSTKIDL---INQGK----SPIV-EPGLEALLQQGRQTGR 63 (436)
T ss_dssp EEEEECCST----------THHHHHHHHHHTTCEEEEECSCHHHHHH---HHTTC----CSSC-CTTHHHHHHHHHHTTC
T ss_pred EEEEECCCH----------HHHHHHHHHHHCCCEEEEEECCHHHHHH---HhCCC----CCcC-CCCHHHHHHhhcccCc
Confidence 799999988 8899999999999999999985433221 11100 0110 0000000 123
Q ss_pred eeeecCHHHhcccccEEEEEecccc--ccccc-------HHHHHHhcCC---CCEEEEcCCCCC
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDE--FKTLD-------YQKIFDNMRK---PAYIFDGRNILD 451 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~--~~~~~-------~~~~~~~~~~---~~~i~D~~~~~~ 451 (480)
+...+++.++++++|+|+++++-+. ....| .+.+...+++ ..+|++...+..
T Consensus 64 l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~ 127 (436)
T 1mv8_A 64 LSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLP 127 (436)
T ss_dssp EEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCT
T ss_pred eEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCC
Confidence 6777889999999999999997654 11222 2455566666 678999866553
No 402
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.03 E-value=0.042 Score=53.27 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=66.5
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--cC
Q 011654 3 KICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--EA 79 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~a 79 (480)
+|.|+|+ |.+|..++..+.+. |++ .++++||.+. +. .+ .++.+..+++++.+ ++
T Consensus 15 ~v~V~Gasg~~G~~~~~~l~~~--g~~-~V~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~~ 71 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKMLEC--GTK-IVGGVTPGKG-----GQ-NV--------------HGVPVFDTVKEAVKETDA 71 (294)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT--TCC-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHCC
T ss_pred EEEEECCCCCHHHHHHHHHHhC--CCe-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCCC
Confidence 5888898 99999999999887 888 6667765421 10 00 24677888888777 89
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++++++|.+ ...+++++..+. ....+|+..+.++....+++.+..++.+
T Consensus 72 Dv~ii~vp~~---------------~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 121 (294)
T 2yv1_A 72 NASVIFVPAP---------------FAKDAVFEAIDA-GIELIVVITEHIPVHDTMEFVNYAEDVG 121 (294)
T ss_dssp CEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred CEEEEccCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 9999998742 234445544442 2223444444454443456766666654
No 403
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.03 E-value=0.023 Score=53.62 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=67.6
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHH-HhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQ-RDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.+|+|+|+.. .+..+++.|.+.|.+|.+||+.....+.. ..+ ++...
T Consensus 4 m~i~iiG~G~----------mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------------------g~~~~ 51 (259)
T 2ahr_A 4 MKIGIIGVGK----------MASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------------------ALPYA 51 (259)
T ss_dssp CEEEEECCSH----------HHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------------------TCCBC
T ss_pred cEEEEECCCH----------HHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------------------CCEee
Confidence 4899999855 78899999999999999999864322211 111 23445
Q ss_pred cCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhh
Q 011654 404 WDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLRE 457 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~ 457 (480)
.+..++++++|+|+++++.... ..+...+++..+|+|..+-++.+.+++
T Consensus 52 ~~~~~~~~~~D~Vi~~v~~~~~-----~~v~~~l~~~~~vv~~~~~~~~~~l~~ 100 (259)
T 2ahr_A 52 MSHQDLIDQVDLVILGIKPQLF-----ETVLKPLHFKQPIISMAAGISLQRLAT 100 (259)
T ss_dssp SSHHHHHHTCSEEEECSCGGGH-----HHHHTTSCCCSCEEECCTTCCHHHHHH
T ss_pred CCHHHHHhcCCEEEEEeCcHhH-----HHHHHHhccCCEEEEeCCCCCHHHHHH
Confidence 6788889999999999984432 234444555568999987777665543
No 404
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.01 E-value=0.0068 Score=58.62 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=66.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|+|+|.+|.++|..|++. | +|+++++++++.+.+.+. +.........-.+.++ +..+.+.++|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~--------~~~~~~~~~~~~~d~~-~~~~~~~~~Di 196 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKE--------IAEKLNKKFGEEVKFS-GLDVDLDGVDI 196 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHH--------HHHHHTCCHHHHEEEE-CTTCCCTTCCE
T ss_pred CEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHH--------HhhhcccccceeEEEe-eHHHhhCCCCE
Confidence 4789999999999999999998 9 999999999888776531 0000000000012232 23344678999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccch
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+|-|+|.....+ .+...+. -...++++.+|++.++.|..|
T Consensus 197 lVn~ag~~~~~~-------~~~~~~~-----~~~~l~~~~~v~Dv~y~p~~t 236 (287)
T 1nvt_A 197 IINATPIGMYPN-------IDVEPIV-----KAEKLREDMVVMDLIYNPLET 236 (287)
T ss_dssp EEECSCTTCTTC-------CSSCCSS-----CSTTCCSSSEEEECCCSSSSC
T ss_pred EEECCCCCCCCC-------CCCCCCC-----CHHHcCCCCEEEEeeeCCccC
Confidence 999987643210 0000000 013456788899888765443
No 405
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.98 E-value=0.037 Score=53.21 Aligned_cols=102 Identities=13% Similarity=0.148 Sum_probs=72.6
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC---EEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKA---KLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~---~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
..||+|+|.. +.+..++..|.+.|. +|.+||+.....+.... ..++
T Consensus 3 ~~~I~iIG~G----------~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---------------------~~gi 51 (280)
T 3tri_A 3 TSNITFIGGG----------NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---------------------KCGV 51 (280)
T ss_dssp CSCEEEESCS----------HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---------------------TTCC
T ss_pred CCEEEEEccc----------HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---------------------HcCC
Confidence 4689999974 488999999999998 99999997654322211 0145
Q ss_pred eeecCHHHhcccccEEEEEecccccccccHHHHHHh-cCCCCEEEEcCCCCChHHHhh
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDN-MRKPAYIFDGRNILDVEKLRE 457 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~-~~~~~~i~D~~~~~~~~~~~~ 457 (480)
....+..++++++|+|+++++...+++ -++++... +++..+|+..-+-+..+.+.+
T Consensus 52 ~~~~~~~~~~~~aDvVilav~p~~~~~-vl~~l~~~~l~~~~iiiS~~agi~~~~l~~ 108 (280)
T 3tri_A 52 HTTQDNRQGALNADVVVLAVKPHQIKM-VCEELKDILSETKILVISLAVGVTTPLIEK 108 (280)
T ss_dssp EEESCHHHHHSSCSEEEECSCGGGHHH-HHHHHHHHHHTTTCEEEECCTTCCHHHHHH
T ss_pred EEeCChHHHHhcCCeEEEEeCHHHHHH-HHHHHHhhccCCCeEEEEecCCCCHHHHHH
Confidence 667789999999999999997655544 23456554 554448888777666665543
No 406
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.95 E-value=0.0085 Score=59.87 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=26.6
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|||+|+| .|++|..++..|.++ +.++|+.+.
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~ 40 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMFELTALA 40 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEE
Confidence 6999999 899999999999875 567888774
No 407
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.95 E-value=0.013 Score=55.25 Aligned_cols=100 Identities=14% Similarity=0.169 Sum_probs=69.0
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCC----EEEEECCCCChHHHH-HhhhccccCCCCCCCCCCCCCCCCCc
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKA----KLSIYDPQVTEDQIQ-RDLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~----~V~~~DP~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.||+|+|... ....+++.|.+.|. +|.+||+.-...+.. ..+ +
T Consensus 3 ~~i~iIG~G~----------mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~----------------------g 50 (247)
T 3gt0_A 3 KQIGFIGCGN----------MGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY----------------------G 50 (247)
T ss_dssp CCEEEECCSH----------HHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH----------------------C
T ss_pred CeEEEECccH----------HHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh----------------------C
Confidence 4799999855 88999999999998 999999964332221 111 3
Q ss_pred eeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhh
Q 011654 400 VNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLRE 457 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~ 457 (480)
+....+..++++++|+|+++++...++++- +.+...+++..+|+..-+-+..+.+++
T Consensus 51 ~~~~~~~~e~~~~aDvVilav~~~~~~~v~-~~l~~~l~~~~~vvs~~~gi~~~~l~~ 107 (247)
T 3gt0_A 51 LTTTTDNNEVAKNADILILSIKPDLYASII-NEIKEIIKNDAIIVTIAAGKSIESTEN 107 (247)
T ss_dssp CEECSCHHHHHHHCSEEEECSCTTTHHHHC----CCSSCTTCEEEECSCCSCHHHHHH
T ss_pred CEEeCChHHHHHhCCEEEEEeCHHHHHHHH-HHHHhhcCCCCEEEEecCCCCHHHHHH
Confidence 456778999999999999999655444322 345445555558887666666665543
No 408
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.90 E-value=0.0029 Score=62.02 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=49.7
Q ss_pred cEEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEE-E--e--cCHHHH
Q 011654 2 VKICCIGAGY-VGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLF-F--S--TDIEKH 75 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~-~--t--~d~~~a 75 (480)
.++.|||.|. +|.++|..|... |.+|+++|++..+....... +.. . ....+ + + .++++.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~--gAtVtv~nR~~~~l~~ra~~---la~--------~--~~~~t~~~~t~~~~L~e~ 242 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGES---LKL--------N--KHHVEDLGEYSEDLLKKC 242 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCC---SSC--------C--CCEEEEEEECCHHHHHHH
T ss_pred CEEEEECCCcchHHHHHHHHHHC--CCEEEEEeCchHHHHhHHHH---Hhh--------h--cccccccccccHhHHHHH
Confidence 4799999996 599999999988 88999999874322111110 000 0 00111 1 2 567888
Q ss_pred hccCcEEEEeccCC
Q 011654 76 VAEADIVFVSVNTP 89 (480)
Q Consensus 76 ~~~aDvVii~Vptp 89 (480)
+.+||+||.+++.|
T Consensus 243 l~~ADIVIsAtg~p 256 (320)
T 1edz_A 243 SLDSDVVITGVPSE 256 (320)
T ss_dssp HHHCSEEEECCCCT
T ss_pred hccCCEEEECCCCC
Confidence 99999999999876
No 409
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.90 E-value=0.021 Score=54.50 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=64.4
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeecC
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|... .+..++..|.+.|.+|.+||+.....+....++ .. ....++
T Consensus 2 ~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g------------------~~--~~~~~~ 51 (279)
T 2f1k_A 2 KIGVVGLGL----------IGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ------------------LV--DEAGQD 51 (279)
T ss_dssp EEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT------------------SC--SEEESC
T ss_pred EEEEEcCcH----------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC------------------CC--ccccCC
Confidence 799999754 788999999999999999998644322222111 00 023467
Q ss_pred HHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC
Q 011654 406 AYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI 449 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
++++ +++|+|+++++.+...++ .+++...+++..+|+|..++
T Consensus 52 ~~~~-~~~D~vi~av~~~~~~~~-~~~l~~~~~~~~~vv~~~~~ 93 (279)
T 2f1k_A 52 LSLL-QTAKIIFLCTPIQLILPT-LEKLIPHLSPTAIVTDVASV 93 (279)
T ss_dssp GGGG-TTCSEEEECSCHHHHHHH-HHHHGGGSCTTCEEEECCSC
T ss_pred HHHh-CCCCEEEEECCHHHHHHH-HHHHHhhCCCCCEEEECCCC
Confidence 7787 999999999997765442 34566667766799998553
No 410
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.89 E-value=0.024 Score=58.95 Aligned_cols=108 Identities=15% Similarity=0.085 Sum_probs=71.0
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC-C-----C
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP-A-----S 397 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~ 397 (480)
.-+|+|+|+.| ..+.++..|.+.|.+|.+||..-...+.... .. .|+. .+.... . .
T Consensus 8 ~~~I~VIG~G~----------vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~---~~----~~i~-e~gl~~~l~~~~~~ 69 (478)
T 2y0c_A 8 SMNLTIIGSGS----------VGLVTGACLADIGHDVFCLDVDQAKIDILNN---GG----VPIH-EPGLKEVIARNRSA 69 (478)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHT---TC----CSSC-CTTHHHHHHHHHHT
T ss_pred CceEEEECcCH----------HHHHHHHHHHhCCCEEEEEECCHHHHHHHHC---CC----CCcC-CCCHHHHHHHhccc
Confidence 46999999998 8899999999999999999975332222111 00 0110 000000 0 1
Q ss_pred CceeeecCHHHhcccccEEEEEeccc---------ccccccHHHHHHhcCCCCEEEEcCCC
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWD---------EFKTLDYQKIFDNMRKPAYIFDGRNI 449 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~---------~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
.++..++++.++++++|+++++++-| .+..--.+.+...+++..+|++...+
T Consensus 70 ~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv 130 (478)
T 2y0c_A 70 GRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV 130 (478)
T ss_dssp TCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred CCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 24677889989999999999998875 22221224566677777789998754
No 411
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.89 E-value=0.051 Score=56.61 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=67.7
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHHH-HHHHHCCCCCCCCCChHHHHHhhcCCCEEEe--cCHHHHh
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVAVVDISVSR-IAAWNGDQLPIYEPGLEDVVTQCRGRNLFFS--TDIEKHV 76 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~-v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t--~d~~~a~ 76 (480)
++||.|||+|..|.+ +|..|.+. |++|+++|..... .+.+.+. ++.+. .+.+ .+
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~-------------------gi~~~~g~~~~-~~ 76 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNPVTQQLMNL-------------------GATIYFNHRPE-NV 76 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHT-------------------TCEEESSCCGG-GG
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHC-------------------CCEEECCCCHH-Hc
Confidence 368999999999997 89999888 9999999986532 2333321 12221 2232 35
Q ss_pred ccCcEEEEeccCCCCcCCCCCCCCCChHH-------HHHHHHHHHhhCCCCCEEEEecCCccchHHH-HHHHHHhcC
Q 011654 77 AEADIVFVSVNTPTKTQGLGAGKAADLTY-------WESAARMIANVSNSNKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~-------v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
.++|+||+.-.-|.+ .+.+.. +....+.+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 77 ~~a~~vv~s~~i~~~--------~p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 145 (491)
T 2f00_A 77 RDASVVVVSSAISAD--------NPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAG 145 (491)
T ss_dssp TTCSEEEECTTCCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCCC--------CHHHHHHHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 788988887332211 111100 0011122333344345777777887777665 677887653
No 412
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.89 E-value=0.0062 Score=60.66 Aligned_cols=32 Identities=28% Similarity=0.537 Sum_probs=26.5
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeC
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDI 34 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~ 34 (480)
|||+|+| .|++|.-+...|.++ +..+++.+..
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s 37 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTS 37 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBC
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEEC
Confidence 6899999 699999999999876 4668777654
No 413
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.87 E-value=0.013 Score=56.38 Aligned_cols=97 Identities=15% Similarity=0.105 Sum_probs=68.1
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhC--CCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCcee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGD--KAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVN 401 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~--g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
..+|+|+|+.. .+..++..|.+. |.+|.+||+.....+....++ . ...
T Consensus 6 ~~~I~iIG~G~----------mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g------------------~--~~~ 55 (290)
T 3b1f_A 6 EKTIYIAGLGL----------IGASLALGIKRDHPHYKIVGYNRSDRSRDIALERG------------------I--VDE 55 (290)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT------------------S--CSE
T ss_pred cceEEEEeeCH----------HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcC------------------C--ccc
Confidence 46899999865 788899999887 689999998643322221111 0 002
Q ss_pred eecCHHHhcccccEEEEEecccccccccHHHHHHh-cCCCCEEEEcCCCCC
Q 011654 402 VVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDN-MRKPAYIFDGRNILD 451 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~-~~~~~~i~D~~~~~~ 451 (480)
...+++++++++|+|+++++.+..+++ .+++... +++..+|+|..+...
T Consensus 56 ~~~~~~~~~~~aDvVilavp~~~~~~v-~~~l~~~~l~~~~ivi~~~~~~~ 105 (290)
T 3b1f_A 56 ATADFKVFAALADVIILAVPIKKTIDF-IKILADLDLKEDVIITDAGSTKY 105 (290)
T ss_dssp EESCTTTTGGGCSEEEECSCHHHHHHH-HHHHHTSCCCTTCEEECCCSCHH
T ss_pred ccCCHHHhhcCCCEEEEcCCHHHHHHH-HHHHHhcCCCCCCEEEECCCCch
Confidence 446777888999999999998776442 3456666 666679999887653
No 414
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.87 E-value=0.063 Score=56.40 Aligned_cols=115 Identities=12% Similarity=0.019 Sum_probs=68.8
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCH--HHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVAVVDISV--SRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~--~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
+++|-|||.|-.|.+ +|..|.++ |++|+++|.++ ...+.|.+... .+..-.+.+....
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~--G~~V~~sD~~~~~~~~~~L~~~gi-----------------~~~~G~~~~~~~~ 79 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARAL--GHTVTGSDANIYPPMSTQLEQAGV-----------------TIEEGYLIAHLQP 79 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCCTTHHHHHHHTTC-----------------EEEESCCGGGGCS
T ss_pred CCEEEEEEecHhhHHHHHHHHHhC--CCEEEEECCCCCcHHHHHHHHCCC-----------------EEECCCCHHHcCC
Confidence 378999999999997 67777777 99999999863 23344443211 1222233444235
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHH----------HHhhC-CCCCEEEEecCCccchHHH-HHHHHHhcC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARM----------IANVS-NSNKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~----------i~~~l-~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
++|+||++-.-|. +...++.+.+. +...+ +...+|.+..|..-.||.. +..+|++.+
T Consensus 80 ~~d~vV~Spgi~~-----------~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 80 APDLVVVGNAMKR-----------GMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp CCSEEEECTTCCT-----------TSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCcCC-----------CCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 7899988733322 22233433321 23323 3345777777887766665 567787653
No 415
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.85 E-value=0.15 Score=49.46 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=66.0
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
.+|.|+|+ |.+|..++..+.+. |++ .++.+||.+. +. .+ .++.+..+++++.+ .
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 70 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY--GTK-VVAGVTPGKG-----GS-EV--------------HGVPVYDSVKEALAEHP 70 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHCT
T ss_pred CEEEEECCCCCHHHHHHHHHHhC--CCc-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCC
Confidence 36888898 99999999999887 888 5566665421 10 00 24677888888665 4
Q ss_pred -CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 79 -ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 79 -aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
+|++++++|.+. ..+++++..+. .-..+|+..+.++....+++.+..++.+
T Consensus 71 ~~DvaIi~vp~~~---------------~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 122 (297)
T 2yv2_A 71 EINTSIVFVPAPF---------------APDAVYEAVDA-GIRLVVVITEGIPVHDTMRFVNYARQKG 122 (297)
T ss_dssp TCCEEEECCCGGG---------------HHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCHHH---------------HHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 999999988532 24445544442 2223444444454433456766666654
No 416
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.83 E-value=0.017 Score=55.45 Aligned_cols=104 Identities=12% Similarity=0.129 Sum_probs=70.0
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeecC
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+.. .+..++..|.+ |.+|.+||+.....+..... ++...+
T Consensus 3 ~i~iiG~G~----------~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~----------------------g~~~~~- 48 (289)
T 2cvz_A 3 KVAFIGLGA----------MGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE----------------------FGSEAV- 48 (289)
T ss_dssp CEEEECCST----------THHHHHHHHHT-TSCEEEECSSTHHHHHHHHH----------------------HCCEEC-
T ss_pred eEEEEcccH----------HHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC----------------------CCcccC-
Confidence 799999754 78899999999 99999999865432222211 122333
Q ss_pred HHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCCCCCh--HH----HhhcCcEEEE
Q 011654 406 AYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRNILDV--EK----LREIGFIVYS 464 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~--~~----~~~~g~~y~~ 464 (480)
+.++++++|+|++++..+. .++ -.+.+...+++..+|+|..+.... +. +.+.|..|.+
T Consensus 49 ~~~~~~~~D~vi~~v~~~~~~~~-v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 49 PLERVAEARVIFTCLPTTREVYE-VAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp CGGGGGGCSEEEECCSSHHHHHH-HHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHhCCCEEEEeCCChHHHHH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6677889999999999875 443 224555566666799999876532 12 2234677754
No 417
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.83 E-value=0.052 Score=56.28 Aligned_cols=114 Identities=19% Similarity=0.217 Sum_probs=67.2
Q ss_pred CcEEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHHH-HHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhcc
Q 011654 1 MVKICCIGAGYVGGP-TMAVIALKCPKIEVAVVDISVSR-IAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~-v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+++|.|||+|..|.+ +|..|.+. |++|+++|..... .+.+.+... .+..-.+.+ .+.+
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi-----------------~~~~g~~~~-~~~~ 77 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGA-----------------KIYIGHAEE-HIEG 77 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTC-----------------EEEESCCGG-GGTT
T ss_pred CCEEEEEeecHHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHHHhCCC-----------------EEECCCCHH-HcCC
Confidence 368999999999997 99999888 9999999986532 223332111 111112333 3678
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHH----------HHHHHhhCCCCCEEEEecCCccchHHH-HHHHHHhcC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESA----------ARMIANVSNSNKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~----------~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||+.-.-|.+ .+ .+..+ .+.+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 78 a~~vv~s~~i~~~--------~~---~~~~a~~~~i~vl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 144 (475)
T 1p3d_A 78 ASVVVVSSAIKDD--------NP---ELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAK 144 (475)
T ss_dssp CSEEEECTTSCTT--------CH---HHHHHHHTTCCEEEHHHHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCC--------CH---HHHHHHHcCCcEEEHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 9988887332211 01 11111 112223333335777777887777665 677887653
No 418
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.83 E-value=0.013 Score=56.58 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=48.9
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCC------HHHHHHH---HCCCCCCCCCChHHHHHhhcCCCEEEec
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDIS------VSRIAAW---NGDQLPIYEPGLEDVVTQCRGRNLFFST 70 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~------~~~v~~l---~~~~~~~~e~~l~~l~~~~~~~~l~~t~ 70 (480)
||+|.|.|+ |.+|..++..|++. |++|++++|+ +++.+.+ ......+.. +.+.-..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~~ 69 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVH------------GSIDDHA 69 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEEC------------CCTTCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEE------------eccCCHH
Confidence 468999996 99999999999998 8999999997 4444322 221111111 1111112
Q ss_pred CHHHHhccCcEEEEeccC
Q 011654 71 DIEKHVAEADIVFVSVNT 88 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vpt 88 (480)
++.++++++|+||.|.+.
T Consensus 70 ~l~~~~~~~d~vi~~a~~ 87 (308)
T 1qyc_A 70 SLVEAVKNVDVVISTVGS 87 (308)
T ss_dssp HHHHHHHTCSEEEECCCG
T ss_pred HHHHHHcCCCEEEECCcc
Confidence 345567889999998753
No 419
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.83 E-value=0.014 Score=57.00 Aligned_cols=95 Identities=12% Similarity=0.126 Sum_probs=66.0
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. .+..++..|.+.|.+|.+||+.....+...+ .++...
T Consensus 30 ~~~I~iIG~G~----------mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~ 77 (316)
T 2uyy_A 30 DKKIGFLGLGL----------MGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ----------------------EGARLG 77 (316)
T ss_dssp SSCEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSGGGGHHHHH----------------------TTCEEC
T ss_pred CCeEEEEcccH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------cCCEEc
Confidence 36899999855 7889999999999999999986543322221 123456
Q ss_pred cCHHHhcccccEEEEEecccc-cccccHH--HHHHhcCCCCEEEEcCCCC
Q 011654 404 WDAYQAAKDAHGVCILTEWDE-FKTLDYQ--KIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~-~~~~~~~--~~~~~~~~~~~i~D~~~~~ 450 (480)
.+.+++++++|+|++++..+. .++.-.+ .+...+++..+|+|+.+..
T Consensus 78 ~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 78 RTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp SCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCC
T ss_pred CCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCC
Confidence 688899999999999998543 3221000 1124456667999999865
No 420
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.83 E-value=0.031 Score=55.81 Aligned_cols=110 Identities=13% Similarity=0.055 Sum_probs=74.6
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..||+|+|... ....++..|.+.|.+|.+||......+.....+....| .|.. ....++...
T Consensus 29 ~mkI~VIGaG~----------mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~----l~g~----~l~~~i~~t 90 (356)
T 3k96_A 29 KHPIAILGAGS----------WGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRY----LPNY----PFPETLKAY 90 (356)
T ss_dssp CSCEEEECCSH----------HHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTT----BTTC----CCCTTEEEE
T ss_pred CCeEEEECccH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCccc----CCCC----ccCCCeEEE
Confidence 45899999854 88999999999999999999853322211111100000 0111 123457778
Q ss_pred cCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCCh
Q 011654 404 WDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDV 452 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~ 452 (480)
+++.++++++|+|+++++....++ -.+++...+++..+|++..+=+++
T Consensus 91 ~d~~ea~~~aDvVilaVp~~~~~~-vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 91 CDLKASLEGVTDILIVVPSFAFHE-VITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp SCHHHHHTTCCEEEECCCHHHHHH-HHHHHGGGCCTTCEEEECCCSCBT
T ss_pred CCHHHHHhcCCEEEECCCHHHHHH-HHHHHHHhcCCCCEEEEEeCCCCc
Confidence 899999999999999998876554 235666667666789998875554
No 421
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.82 E-value=0.03 Score=58.20 Aligned_cols=115 Identities=10% Similarity=0.183 Sum_probs=77.9
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHH-HHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQI-QRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+|+|+|+.. ....++..|.++|.+|.+||......+. ...++ . .| ...++....
T Consensus 3 kIgVIG~G~----------mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g---~---~~---------~~~~i~~~~ 57 (478)
T 1pgj_A 3 DVGVVGLGV----------MGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA---S---AP---------FAGNLKAFE 57 (478)
T ss_dssp SEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---T---ST---------TGGGEEECS
T ss_pred EEEEEChHH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC---C---CC---------CCCCeEEEC
Confidence 699999865 8899999999999999999986433221 11111 0 00 012356677
Q ss_pred CHHHhccc---ccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChH--H----HhhcCcEEEEec
Q 011654 405 DAYQAAKD---AHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVE--K----LREIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~~---ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~--~----~~~~g~~y~~iG 466 (480)
++++++++ +|+|+++++.+ ..++ -.+.+...+++..+|||+.+..... + +.+.|+.|.+.+
T Consensus 58 ~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~p 128 (478)
T 1pgj_A 58 TMEAFAASLKKPRKALILVQAGAATDS-TIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG 128 (478)
T ss_dssp CHHHHHHHBCSSCEEEECCCCSHHHHH-HHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHhcccCCCEEEEecCChHHHHH-HHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEee
Confidence 88888774 99999999986 4444 2356777777667999999887432 1 234577776654
No 422
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.81 E-value=0.0062 Score=58.17 Aligned_cols=74 Identities=15% Similarity=0.254 Sum_probs=49.1
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|.|.|+ |.+|..++..|++..+|++|+++++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~~~d 68 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRH------------GDYNQPESLQKAFAGVS 68 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEE------------eccCCHHHHHHHHhcCC
Confidence 68999996 999999999998753479999999987765554422111100 11110122445677899
Q ss_pred EEEEecc
Q 011654 81 IVFVSVN 87 (480)
Q Consensus 81 vVii~Vp 87 (480)
+||-+..
T Consensus 69 ~vi~~a~ 75 (287)
T 2jl1_A 69 KLLFISG 75 (287)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998865
No 423
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.80 E-value=0.045 Score=54.48 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=32.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSR 38 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~--GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCccH
Confidence 4799999999999999999987 8999999999875
No 424
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.79 E-value=0.022 Score=54.75 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=30.9
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|||.|.|+ |++|..++..|.++ ||+|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCC
Confidence 89999997 99999999999998 99999999864
No 425
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.76 E-value=0.012 Score=57.51 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=35.2
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWN 43 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
|+|.|.|+ |.+|..++..|++. |++|++++++++..+.+.
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHH
Confidence 68999997 99999999999998 999999999988765543
No 426
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.75 E-value=0.11 Score=53.93 Aligned_cols=111 Identities=12% Similarity=0.125 Sum_probs=72.6
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhC-CC-EEEEECCCCC----hHHHHHhhhccccCCCCCCC-CCCCCCC
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGD-KA-KLSIYDPQVT----EDQIQRDLSMKKFDWDHPIH-LQPMSPP 395 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~-g~-~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 395 (480)
.-.||+|+|+.| ....++..|.+. |. +|.+||..-. ..+.... ...|++ ..+....
T Consensus 17 ~~mkIaVIGlG~----------mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~-------g~~~i~~~e~gl~~ 79 (478)
T 3g79_A 17 PIKKIGVLGMGY----------VGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNR-------GESPLKGEEPGLEE 79 (478)
T ss_dssp SCCEEEEECCST----------THHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTT-------TCCCSSCCGGGHHH
T ss_pred CCCEEEEECcCH----------HHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHh-------cCCCccccCCCHHH
Confidence 446999999988 889999999999 99 9999998765 3222111 001110 0000000
Q ss_pred ------CCCceeeecCHHHhcccccEEEEEeccccccc----cc-------HHHHHHhcCCCCEEEEcCCCCC
Q 011654 396 ------ASKQVNVVWDAYQAAKDAHGVCILTEWDEFKT----LD-------YQKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 396 ------~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~----~~-------~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
...++..+++ .+++++||+++++++-+.-.+ .| .+.+...+++..+|||...+..
T Consensus 80 l~~~~~~~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p 151 (478)
T 3g79_A 80 LIGKVVKAGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP 151 (478)
T ss_dssp HHHHHHHTTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred HHHhhcccCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence 0245667777 789999999999987663111 12 2466777887889999876554
No 427
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.74 E-value=0.1 Score=52.40 Aligned_cols=131 Identities=12% Similarity=0.011 Sum_probs=77.1
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCC---
Q 011654 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASK--- 398 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 398 (480)
+.+++|+|+|.. .-.+..++.|...|++|.+||+.....+...+++ ..+..-.. .....+.+.
T Consensus 182 v~~~kV~ViG~G----------~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lG---a~~~~l~~-~~~~~~gya~~~ 247 (381)
T 3p2y_A 182 VKPASALVLGVG----------VAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVG---AQWLDLGI-DAAGEGGYAREL 247 (381)
T ss_dssp ECCCEEEEESCS----------HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTT---CEECCCC--------------
T ss_pred cCCCEEEEECch----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC---CeEEeccc-cccccccchhhh
Confidence 478899999974 3778899999999999999999876544333332 11100000 000000000
Q ss_pred ----ceeeecCHHHhcccccEEEEEecccc--cccccHHHHHHhcCCCCEEEEcC----CCCCh----HHHhhcCcEEEE
Q 011654 399 ----QVNVVWDAYQAAKDAHGVCILTEWDE--FKTLDYQKIFDNMRKPAYIFDGR----NILDV----EKLREIGFIVYS 464 (480)
Q Consensus 399 ----~~~~~~~~~~a~~~ad~vvi~t~h~~--~~~~~~~~~~~~~~~~~~i~D~~----~~~~~----~~~~~~g~~y~~ 464 (480)
......++.++++++|+||..+..|. -..+=.++..+.|++..+|||.. +.++- +.....|+.+++
T Consensus 248 ~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~ 327 (381)
T 3p2y_A 248 SEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITS 327 (381)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEEC
T ss_pred hHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEe
Confidence 00012367789999999997654442 11122256778899888999985 34431 112345777766
Q ss_pred ec
Q 011654 465 IG 466 (480)
Q Consensus 465 iG 466 (480)
+-
T Consensus 328 v~ 329 (381)
T 3p2y_A 328 PL 329 (381)
T ss_dssp CS
T ss_pred eC
Confidence 54
No 428
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.74 E-value=0.015 Score=55.91 Aligned_cols=106 Identities=10% Similarity=0.077 Sum_probs=71.4
Q ss_pred CEEEEEee-ccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 325 KKIAILGF-AFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 325 ~~v~ilGl-a~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.+|+|+|+ .. .+..+++.|.+.|.+|.+||+.....+...++ ++..
T Consensus 12 m~I~iIG~tG~----------mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----------------------g~~~- 58 (286)
T 3c24_A 12 KTVAILGAGGK----------MGARITRKIHDSAHHLAAIEIAPEGRDRLQGM----------------------GIPL- 58 (286)
T ss_dssp CEEEEETTTSH----------HHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT----------------------TCCC-
T ss_pred CEEEEECCCCH----------HHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc----------------------CCCc-
Confidence 48999997 54 78899999999999999999864322211111 1222
Q ss_pred cCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChHHHhh--cCcEEEE
Q 011654 404 WDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLRE--IGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~--~g~~y~~ 464 (480)
.+..++++++|+|++++..+..+++ .+.+...+++..+|+|+.+..+.+.+.+ .+..|.+
T Consensus 59 ~~~~~~~~~aDvVi~av~~~~~~~v-~~~l~~~l~~~~ivv~~s~~~~~~~l~~~~~~~~~v~ 120 (286)
T 3c24_A 59 TDGDGWIDEADVVVLALPDNIIEKV-AEDIVPRVRPGTIVLILDAAAPYAGVMPERADITYFI 120 (286)
T ss_dssp CCSSGGGGTCSEEEECSCHHHHHHH-HHHHGGGSCTTCEEEESCSHHHHHTCSCCCTTSEEEE
T ss_pred CCHHHHhcCCCEEEEcCCchHHHHH-HHHHHHhCCCCCEEEECCCCchhHHHHhhhCCCeEEe
Confidence 2566788999999999988775542 2456566666679999887664333322 2456653
No 429
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.70 E-value=0.032 Score=54.68 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=52.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC---HHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEe--cC---H
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDIS---VSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFS--TD---I 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~---~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t--~d---~ 72 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|+ .++.+.+.+. +-.. ....+.+. ++ +
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~--Ga~~V~i~nR~~~~~~~a~~la~~-----------~~~~-~~~~~~~~~~~~~~~l 220 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD--GVKEISIFNRKDDFYANAEKTVEK-----------INSK-TDCKAQLFDIEDHEQL 220 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHH-----------HHHH-SSCEEEEEETTCHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHC--CCCEEEEEECCCchHHHHHHHHHH-----------hhhh-cCCceEEeccchHHHH
Confidence 4789999999999999999998 87 89999999 8887776531 1000 00112221 22 3
Q ss_pred HHHhccCcEEEEeccCC
Q 011654 73 EKHVAEADIVFVSVNTP 89 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp 89 (480)
.+.+.++|+||-|+|..
T Consensus 221 ~~~l~~aDiIINaTp~G 237 (315)
T 3tnl_A 221 RKEIAESVIFTNATGVG 237 (315)
T ss_dssp HHHHHTCSEEEECSSTT
T ss_pred HhhhcCCCEEEECccCC
Confidence 45577999999998754
No 430
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.70 E-value=0.014 Score=56.30 Aligned_cols=74 Identities=11% Similarity=0.134 Sum_probs=50.1
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCC-----HHHHHHHH---CCCCCCCCCChHHHHHhhcCCCEEEecC
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDIS-----VSRIAAWN---GDQLPIYEPGLEDVVTQCRGRNLFFSTD 71 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~-----~~~v~~l~---~~~~~~~e~~l~~l~~~~~~~~l~~t~d 71 (480)
+|+|.|.|+ |.+|..++..|.+. |++|++++|+ +++.+.+. .....+. .+.+.-..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~------------~~D~~d~~~ 69 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI------------EASLDDHQR 69 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE------------CCCSSCHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEE------------eCCCCCHHH
Confidence 478999995 99999999999998 9999999998 55544332 2111111 111111123
Q ss_pred HHHHhccCcEEEEeccC
Q 011654 72 IEKHVAEADIVFVSVNT 88 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vpt 88 (480)
+.++++++|+||.+.+.
T Consensus 70 l~~~~~~~d~vi~~a~~ 86 (313)
T 1qyd_A 70 LVDALKQVDVVISALAG 86 (313)
T ss_dssp HHHHHTTCSEEEECCCC
T ss_pred HHHHHhCCCEEEECCcc
Confidence 45667899999999764
No 431
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.69 E-value=0.0037 Score=61.83 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=44.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCC--------CCeE-EEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCP--------KIEV-AVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDI 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~--------G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~ 72 (480)
+||+|||+|.||..++..+.++ + +.+| .++|+++++.+ + + +. -.+++|+
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~-~~~l~~~g~~~~lvaV~d~~~~~~~----~---~---~~-----------~~~~~d~ 61 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLER-AEELSAFGVVPRFLGVLVRDPRKPR----A---I---PQ-----------ELLRAEP 61 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-GGGGGGGTEEEEEEEEECSCTTSCC----S---S---CG-----------GGEESSC
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-hhhHhhcCCCEEEEEEEECCHHHhh----c---c---Cc-----------ccccCCH
Confidence 6899999999999999998875 2 2454 45687744211 1 0 00 1246777
Q ss_pred HHHhccCcEEEEeccC
Q 011654 73 EKHVAEADIVFVSVNT 88 (480)
Q Consensus 73 ~~a~~~aDvVii~Vpt 88 (480)
++.+ +.|+|++|+|+
T Consensus 62 ~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 62 FDLL-EADLVVEAMGG 76 (332)
T ss_dssp CCCT-TCSEEEECCCC
T ss_pred HHHh-CCCEEEECCCC
Confidence 7767 99999999774
No 432
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.68 E-value=0.021 Score=56.81 Aligned_cols=94 Identities=18% Similarity=0.314 Sum_probs=58.3
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEe-cCHHHHhcc
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFS-TDIEKHVAE 78 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t-~d~~~a~~~ 78 (480)
|.||+||| .|++|.-+...|..+ |..++..+.-..+. |+ .+.+...... ..+.+. .+.++...+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~el~~l~S~~~a------G~------~~~~~~p~~~-~~l~~~~~~~~~~~~~ 78 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYA------GK------KLEEIFPSTL-ENSILSEFDPEKVSKN 78 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTT------TS------BHHHHCGGGC-CCCBCBCCCHHHHHHH
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEeCcccc------cC------ChHHhChhhc-cCceEEeCCHHHhhcC
Confidence 56899998 599999999999987 67788777643211 10 0111100000 112222 244443378
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecC
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKST 128 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+|++|+|+|.. +..++.+.+ .|..||+.|+
T Consensus 79 ~Dvvf~alp~~-------------------~s~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 79 CDVLFTALPAG-------------------ASYDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp CSEEEECCSTT-------------------HHHHHHTTC-CSCEEEESSS
T ss_pred CCEEEECCCcH-------------------HHHHHHHHh-CCCEEEECCh
Confidence 99999998742 344556666 7899998876
No 433
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.67 E-value=0.0036 Score=59.98 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=32.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSR 38 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
+|||.|.|+|++|..++..|.++ |++|++++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCccc
Confidence 47899999999999999999998 9999999998653
No 434
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.63 E-value=0.013 Score=54.53 Aligned_cols=75 Identities=11% Similarity=0.114 Sum_probs=51.2
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.| .|.+|..++..|+++++|++|++.++++++.+.+..+ ..+..-+ +.-..++.++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~D------------~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-ADVFIGD------------ITDADSINPAFQGI 70 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCC-TTEEECC------------TTSHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCC-eeEEEec------------CCCHHHHHHHHcCC
Confidence 47899998 5999999999999873369999999999887765221 1111111 10012344567789
Q ss_pred cEEEEeccC
Q 011654 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-+...
T Consensus 71 d~vi~~a~~ 79 (253)
T 1xq6_A 71 DALVILTSA 79 (253)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeccc
Confidence 999998753
No 435
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.63 E-value=0.01 Score=59.39 Aligned_cols=32 Identities=25% Similarity=0.629 Sum_probs=26.8
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeC
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDI 34 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~ 34 (480)
+||+|+| .|++|.-+...|.++ +..+++.+..
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~ 49 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTA 49 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeC
Confidence 5899999 899999999999876 5568777754
No 436
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.63 E-value=0.073 Score=51.45 Aligned_cols=84 Identities=11% Similarity=0.079 Sum_probs=63.7
Q ss_pred HHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCC
Q 011654 315 VSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
++..+.++.+++|.|+|-+- .-...++..|...|++|++.+-.
T Consensus 156 l~~~~i~l~gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~---------------------------- 198 (301)
T 1a4i_A 156 IKETGVPIAGRHAVVVGRSK---------IVGAPMHDLLLWNNATVTTCHSK---------------------------- 198 (301)
T ss_dssp HHTTTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTT----------------------------
T ss_pred HHHcCCCCCCCEEEEECCCc---------hHHHHHHHHHHhCCCeEEEEECC----------------------------
Confidence 34445578999999999632 34688999999999999998632
Q ss_pred CCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI 449 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~ 449 (480)
..++.+.++.||+||.++..+.|- ..+. .++.++|||.---
T Consensus 199 --------t~~L~~~~~~ADIVI~Avg~p~~I--~~~~----vk~GavVIDVgi~ 239 (301)
T 1a4i_A 199 --------TAHLDEEVNKGDILVVATGQPEMV--KGEW----IKPGAIVIDCGIN 239 (301)
T ss_dssp --------CSSHHHHHTTCSEEEECCCCTTCB--CGGG----SCTTCEEEECCCB
T ss_pred --------cccHHHHhccCCEEEECCCCcccC--CHHH----cCCCcEEEEccCC
Confidence 135678899999999999999873 3323 3566799998653
No 437
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.60 E-value=0.011 Score=56.96 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=49.6
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH-------HHHHHHH---CCCCCCCCCChHHHHHhhcCCCEEEe
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISV-------SRIAAWN---GDQLPIYEPGLEDVVTQCRGRNLFFS 69 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~-------~~v~~l~---~~~~~~~e~~l~~l~~~~~~~~l~~t 69 (480)
||+|.|.|+ |.+|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~ 67 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLE------------GDINDH 67 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE------------CCTTCH
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE------------eCCCCH
Confidence 578999996 99999999999998 89999999986 5544332 11111000 111001
Q ss_pred cCHHHHhccCcEEEEeccC
Q 011654 70 TDIEKHVAEADIVFVSVNT 88 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vpt 88 (480)
.++.++++++|+||-|.+.
T Consensus 68 ~~l~~~~~~~d~vi~~a~~ 86 (307)
T 2gas_A 68 ETLVKAIKQVDIVICAAGR 86 (307)
T ss_dssp HHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHhCCCEEEECCcc
Confidence 2345567889999999763
No 438
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.60 E-value=0.013 Score=56.34 Aligned_cols=93 Identities=13% Similarity=0.024 Sum_probs=64.4
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. .+..++..|.+.|.+|.+|| .....+...+ .++....
T Consensus 4 m~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~----------------------~g~~~~~ 50 (295)
T 1yb4_A 4 MKLGFIGLGI----------MGSPMAINLARAGHQLHVTT-IGPVADELLS----------------------LGAVNVE 50 (295)
T ss_dssp CEEEECCCST----------THHHHHHHHHHTTCEEEECC-SSCCCHHHHT----------------------TTCBCCS
T ss_pred CEEEEEccCH----------HHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH----------------------cCCcccC
Confidence 4899999855 78899999999999999999 5433221111 1344567
Q ss_pred CHHHhcccccEEEEEecccc-cccccH--HHHHHhcCCCCEEEEcCCCC
Q 011654 405 DAYQAAKDAHGVCILTEWDE-FKTLDY--QKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~~-~~~~~~--~~~~~~~~~~~~i~D~~~~~ 450 (480)
+++++++++|+|++++..+. .+.+-. +.+...+++..+|+|..+..
T Consensus 51 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 51 TARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp SHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCC
T ss_pred CHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCC
Confidence 88899999999999997764 222110 02233455667899998875
No 439
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.59 E-value=0.0025 Score=63.07 Aligned_cols=39 Identities=5% Similarity=-0.093 Sum_probs=35.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNG 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
++|.|+|+|.+|..++..|.+. |+ |+++|+|+++++ +++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~ 154 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKK-VLR 154 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHH
T ss_pred CCEEEECCcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHh
Confidence 4799999999999999999987 89 999999999998 764
No 440
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.59 E-value=0.026 Score=52.02 Aligned_cols=95 Identities=17% Similarity=0.168 Sum_probs=66.2
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
...+|+|+|... .+..+++.|.+.|.+|.++|...... ..+. ..++..
T Consensus 27 ~~~~I~iiG~G~----------~G~~la~~l~~~g~~V~~~~r~~~~~---~~~~-------------------~~g~~~ 74 (215)
T 2vns_A 27 EAPKVGILGSGD----------FARSLATRLVGSGFKVVVGSRNPKRT---ARLF-------------------PSAAQV 74 (215)
T ss_dssp --CCEEEECCSH----------HHHHHHHHHHHTTCCEEEEESSHHHH---HHHS-------------------BTTSEE
T ss_pred CCCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCCHHHH---HHHH-------------------HcCCce
Confidence 346899999755 77899999999999999999853321 1221 012344
Q ss_pred ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH
Q 011654 403 VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE 453 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~ 453 (480)
. +..++++++|+|++++....++++- + +.... +..+|+|..+.+...
T Consensus 75 ~-~~~~~~~~~DvVi~av~~~~~~~v~-~-l~~~~-~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 75 T-FQEEAVSSPEVIFVAVFREHYSSLC-S-LSDQL-AGKILVDVSNPTEQE 121 (215)
T ss_dssp E-EHHHHTTSCSEEEECSCGGGSGGGG-G-GHHHH-TTCEEEECCCCCHHH
T ss_pred e-cHHHHHhCCCEEEECCChHHHHHHH-H-HHHhc-CCCEEEEeCCCcccc
Confidence 3 6788899999999999976665532 2 43333 345999999988654
No 441
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.58 E-value=0.0063 Score=59.64 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=47.2
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccC
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEA 79 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.|+ |.+|..++..|++. |++|++++++++..+.+......+.. +.+.-..++.++++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~------------~Dl~d~~~~~~~~~~~ 78 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRV------------AEMLDHAGLERALRGL 78 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEE------------ecCCCHHHHHHHHcCC
Confidence 379999995 99999999999998 99999999987654433321100000 1110011234556789
Q ss_pred cEEEEecc
Q 011654 80 DIVFVSVN 87 (480)
Q Consensus 80 DvVii~Vp 87 (480)
|+||-|..
T Consensus 79 d~vih~a~ 86 (342)
T 2x4g_A 79 DGVIFSAG 86 (342)
T ss_dssp SEEEEC--
T ss_pred CEEEECCc
Confidence 99998875
No 442
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.57 E-value=0.026 Score=53.38 Aligned_cols=90 Identities=12% Similarity=0.004 Sum_probs=62.0
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeecC
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+.. ....++..|.+.|.+|.+||+.-.++.. ..+.. .++. ++
T Consensus 2 ~I~iIG~G~----------mG~~la~~l~~~g~~V~~~~~~~~~~~~-~~~~~-------------------~g~~--~~ 49 (264)
T 1i36_A 2 RVGFIGFGE----------VAQTLASRLRSRGVEVVTSLEGRSPSTI-ERART-------------------VGVT--ET 49 (264)
T ss_dssp EEEEESCSH----------HHHHHHHHHHHTTCEEEECCTTCCHHHH-HHHHH-------------------HTCE--EC
T ss_pred eEEEEechH----------HHHHHHHHHHHCCCeEEEeCCccCHHHH-HHHHH-------------------CCCc--CC
Confidence 799999855 8899999999999999999984222222 11110 1222 56
Q ss_pred HHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCC
Q 011654 406 AYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~ 450 (480)
+.++++++|+|+++++.+...+. ...+...++ + +|+|..+.-
T Consensus 50 ~~~~~~~aDvvi~~v~~~~~~~~-~~~~~~~~~-~-~vi~~s~~~ 91 (264)
T 1i36_A 50 SEEDVYSCPVVISAVTPGVALGA-ARRAGRHVR-G-IYVDINNIS 91 (264)
T ss_dssp CHHHHHTSSEEEECSCGGGHHHH-HHHHHTTCC-S-EEEECSCCC
T ss_pred HHHHHhcCCEEEEECCCHHHHHH-HHHHHHhcC-c-EEEEccCCC
Confidence 77888999999999988753321 245655554 4 899996553
No 443
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.57 E-value=0.054 Score=52.46 Aligned_cols=119 Identities=10% Similarity=0.084 Sum_probs=70.7
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHh--------hhccccCCCCC--CCCCCCCC
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRD--------LSMKKFDWDHP--IHLQPMSP 394 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~ 394 (480)
++|+|+|+.. ....++..|.+.|++|.+||+.....+.... +...+. .... .+. ...
T Consensus 16 ~~I~VIG~G~----------mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~-~~~~~~~~~--~~~ 82 (302)
T 1f0y_A 16 KHVTVIGGGL----------MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKF-AENPKAGDE--FVE 82 (302)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTS-SSCHHHHHH--HHH
T ss_pred CEEEEECCCH----------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCC-CCccccchh--hHH
Confidence 6899999865 8889999999999999999986433211000 000000 0000 000 000
Q ss_pred CCCCceeeecCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCCCCChHHHh
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRNILDVEKLR 456 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
....++...+++.+++++||+||+++.-+. .+.--++++...+++..+|+...+-++...+.
T Consensus 83 ~~~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~ 145 (302)
T 1f0y_A 83 KTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIA 145 (302)
T ss_dssp HHHHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHH
T ss_pred HHHhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHH
Confidence 001246677888889999999999986542 22212344555555556788777777766553
No 444
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.56 E-value=0.012 Score=57.25 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=31.3
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISV 36 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
||+|.|.|+ |.+|..++..|++. |++|++++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCc
Confidence 578999995 99999999999998 99999999985
No 445
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.55 E-value=0.045 Score=52.40 Aligned_cols=73 Identities=18% Similarity=0.331 Sum_probs=0.0
Q ss_pred cEEEEEcCChh-HHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCc
Q 011654 2 VKICCIGAGYV-GGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|.+ |.++|..|...+.|.+|++.++. +.++.+.+++||
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~---------------------------------t~~L~~~~~~AD 205 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG---------------------------------TRDLPALTRQAD 205 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc---------------------------------hhHHHHHHhhCC
Q ss_pred EEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec
Q 011654 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-... ..+++|.+||+.+
T Consensus 206 IVI~Avg~p~~I~~--------------------~~vk~GavVIDVg 232 (281)
T 2c2x_A 206 IVVAAVGVAHLLTA--------------------DMVRPGAAVIDVG 232 (281)
T ss_dssp EEEECSCCTTCBCG--------------------GGSCTTCEEEECC
T ss_pred EEEECCCCCcccCH--------------------HHcCCCcEEEEcc
No 446
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.47 E-value=0.076 Score=50.98 Aligned_cols=82 Identities=11% Similarity=0.069 Sum_probs=62.6
Q ss_pred HHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCC
Q 011654 315 VSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
++..+.++.+++|.|+|.+- .-...++..|...|++|++.+-..
T Consensus 150 l~~~~i~l~gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~t--------------------------- 193 (288)
T 1b0a_A 150 LERYNIDTFGLNAVVIGASN---------IVGRPMSMELLLAGCTTTVTHRFT--------------------------- 193 (288)
T ss_dssp HHHTTCCCTTCEEEEECCCT---------TTHHHHHHHHHTTTCEEEEECSSC---------------------------
T ss_pred HHHcCCCCCCCEEEEECCCh---------HHHHHHHHHHHHCCCeEEEEeCCc---------------------------
Confidence 34445678999999999632 246889999999999999986321
Q ss_pred CCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcC
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGR 447 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
.++.+.++.||+||.++..+.|-.-+| .++.++|||.-
T Consensus 194 ---------~~L~~~~~~ADIVI~Avg~p~lI~~~~------vk~GavVIDVg 231 (288)
T 1b0a_A 194 ---------KNLRHHVENADLLIVAVGKPGFIPGDW------IKEGAIVIDVG 231 (288)
T ss_dssp ---------SCHHHHHHHCSEEEECSCCTTCBCTTT------SCTTCEEEECC
T ss_pred ---------hhHHHHhccCCEEEECCCCcCcCCHHH------cCCCcEEEEcc
Confidence 356788999999999999998743333 35677999975
No 447
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.41 E-value=0.023 Score=56.40 Aligned_cols=93 Identities=11% Similarity=0.100 Sum_probs=65.7
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+. ...-.++..|.+.|.+|.+||+.....+...++ ++...
T Consensus 8 ~~kIgIIG~G----------~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~----------------------G~~~~ 55 (341)
T 3ktd_A 8 SRPVCILGLG----------LIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDE----------------------GFDVS 55 (341)
T ss_dssp SSCEEEECCS----------HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHT----------------------TCCEE
T ss_pred CCEEEEEeec----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----------------------CCeee
Confidence 4689999984 378889999999999999999865433322222 23445
Q ss_pred cCHHHhccc----ccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCC
Q 011654 404 WDAYQAAKD----AHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 404 ~~~~~a~~~----ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~ 450 (480)
+++.+++++ +|+|+++++-....++ .+++... ++..+|+|..++-
T Consensus 56 ~~~~e~~~~a~~~aDlVilavP~~~~~~v-l~~l~~~-~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 56 ADLEATLQRAAAEDALIVLAVPMTAIDSL-LDAVHTH-APNNGFTDVVSVK 104 (341)
T ss_dssp SCHHHHHHHHHHTTCEEEECSCHHHHHHH-HHHHHHH-CTTCCEEECCSCS
T ss_pred CCHHHHHHhcccCCCEEEEeCCHHHHHHH-HHHHHcc-CCCCEEEEcCCCC
Confidence 677777764 6999999996654432 2455554 5567999997764
No 448
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.38 E-value=0.033 Score=54.02 Aligned_cols=81 Identities=15% Similarity=0.032 Sum_probs=63.1
Q ss_pred CCEEEEEe-eccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 324 GKKIAILG-FAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 324 ~~~v~ilG-la~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
.++|+|+| +.. ....++..|.+.|.+|.+||+...
T Consensus 21 ~~~I~iIGg~G~----------mG~~la~~l~~~G~~V~~~~~~~~---------------------------------- 56 (298)
T 2pv7_A 21 IHKIVIVGGYGK----------LGGLFARYLRASGYPISILDREDW---------------------------------- 56 (298)
T ss_dssp CCCEEEETTTSH----------HHHHHHHHHHTTTCCEEEECTTCG----------------------------------
T ss_pred CCEEEEEcCCCH----------HHHHHHHHHHhCCCeEEEEECCcc----------------------------------
Confidence 35899999 866 889999999999999999997431
Q ss_pred ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCC
Q 011654 403 VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~ 450 (480)
.+..++++++|+|+++++-+...++ .+++...+++..+|+|..++-
T Consensus 57 -~~~~~~~~~aDvVilavp~~~~~~v-l~~l~~~l~~~~iv~~~~svk 102 (298)
T 2pv7_A 57 -AVAESILANADVVIVSVPINLTLET-IERLKPYLTENMLLADLTSVK 102 (298)
T ss_dssp -GGHHHHHTTCSEEEECSCGGGHHHH-HHHHGGGCCTTSEEEECCSCC
T ss_pred -cCHHHHhcCCCEEEEeCCHHHHHHH-HHHHHhhcCCCcEEEECCCCC
Confidence 1356778999999999998875542 245666677677999987753
No 449
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.37 E-value=0.0077 Score=59.74 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=26.7
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcC-CCCeEEEEe
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKC-PKIEVAVVD 33 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~-~G~~V~~~D 33 (480)
||||+|+| .|++|.-+...|.++. |.++++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 58999999 9999999999888752 456777665
No 450
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.35 E-value=0.0084 Score=59.80 Aligned_cols=31 Identities=29% Similarity=0.589 Sum_probs=26.3
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+|+| .|++|.-+...|..+ |..+++.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~ 36 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-PYLELVKVS 36 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-CCcEEEEEe
Confidence 6899999 799999999988875 567887774
No 451
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.32 E-value=0.083 Score=50.07 Aligned_cols=108 Identities=10% Similarity=0.016 Sum_probs=70.0
Q ss_pred CcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCCh-HHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 011654 320 NTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTE-DQIQRDLSMKKFDWDHPIHLQPMSPPASK 398 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
..+++ +|+|+|..- .+..++..|.+.|++|.++|+.... +.+...++
T Consensus 113 ~~l~~-~v~iiG~G~----------~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~--------------------- 160 (263)
T 2d5c_A 113 IPLKG-PALVLGAGG----------AGRAVAFALREAGLEVWVWNRTPQRALALAEEFG--------------------- 160 (263)
T ss_dssp CCCCS-CEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---------------------
T ss_pred CCCCC-eEEEECCcH----------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------------------
Confidence 35678 999999754 7788999999999999999987533 22222221
Q ss_pred ceeeecCHHHhcccccEEEEEecccccccccHHHH-HHhcCCCCEEEEcCCCCCh----HHHhhcCcEEE
Q 011654 399 QVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKI-FDNMRKPAYIFDGRNILDV----EKLREIGFIVY 463 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~-~~~~~~~~~i~D~~~~~~~----~~~~~~g~~y~ 463 (480)
.. .++++++ +++|+||++|+...+.+.+ ..+ .+.+++..+|+|.-..... +.+++.|.++.
T Consensus 161 -~~-~~~~~~~-~~~Divi~~tp~~~~~~~~-~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 161 -LR-AVPLEKA-REARLLVNATRVGLEDPSA-SPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQ 226 (263)
T ss_dssp -CE-ECCGGGG-GGCSEEEECSSTTTTCTTC-CSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCEEE
T ss_pred -cc-hhhHhhc-cCCCEEEEccCCCCCCCCC-CCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCEEE
Confidence 11 2466777 8999999999987643211 001 2445666689998654221 23345677653
No 452
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.31 E-value=0.11 Score=50.61 Aligned_cols=103 Identities=12% Similarity=0.059 Sum_probs=65.5
Q ss_pred EEEEE-cC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc--c
Q 011654 3 KICCI-GA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA--E 78 (480)
Q Consensus 3 kI~VI-Gl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+++|| |+ |.+|...+..|.+. |++ .++++||.+. +. .+ .++.+..+++++.+ .
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~--G~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 71 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEY--GTN-LVGGTTPGKG-----GK-TH--------------LGLPVFNTVKEAKEQTG 71 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred cEEEEECCCCCHHHHHHHHHHHC--CCc-EEEEeCCCcC-----cc-eE--------------CCeeeechHHHhhhcCC
Confidence 58888 98 99999999999988 898 5567766421 10 00 24677788888777 7
Q ss_pred CcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhc
Q 011654 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
.|++++++|.+ ...++++++.+. .-..+|+..+.++....+++.+..++.
T Consensus 72 vD~avI~vP~~---------------~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 72 ATASVIYVPPP---------------FAAAAINEAIDA-EVPLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp CCEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 99999999842 234555555442 223444443333332233566666655
No 453
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.30 E-value=0.049 Score=55.88 Aligned_cols=114 Identities=12% Similarity=0.132 Sum_probs=67.1
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||.|||+|..|.+.|..|+++ |++|+++|.....- +...+. .| -++..-....+.+.++|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~~-----~~~~l~-~G----------~~~~~g~~~~~~~~~~d~ 67 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPP-----GLDKLP-EA----------VERHTGSLNDEWLMAADL 67 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSSSCT-----TGGGSC-TT----------SCEEESSCCHHHHHTCSE
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCCCcc-----hhHHhh-CC----------CEEEECCCcHHHhccCCE
Confidence 6899999999999999888887 99999999854210 000000 01 112212222445678999
Q ss_pred EEEeccCCCCcCCCCCCCCCChHHHHHHH----------HHHHhhCCCCCEEEEecCCccchHHH-HHHHHHhcC
Q 011654 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA----------RMIANVSNSNKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~----------~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
||++..-|.+ .| .+..+. +-+...+ +..+|-+..|..-+||.. +..+|++.+
T Consensus 68 vV~s~gi~~~--------~p---~~~~a~~~~~~v~~~~~~~~~~~-~~~vI~VTGTnGKTTT~~ml~~iL~~~g 130 (439)
T 2x5o_A 68 IVASPGIALA--------HP---SLSAAADAGIEIVGDIELFCREA-QAPIVAITGSNGKSTVTTLVGEMAKAAG 130 (439)
T ss_dssp EEECTTSCTT--------CH---HHHHHHHTTCEEECHHHHHHHHC-CSCEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred EEeCCCCCCC--------CH---HHHHHHHCCCcEEEHHHHHHHhc-CCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 9888443321 12 222211 1122233 356777778887777665 677887753
No 454
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.29 E-value=0.0042 Score=57.27 Aligned_cols=69 Identities=13% Similarity=0.345 Sum_probs=45.0
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHH-HHHH-HHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc-
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVA-VVDISVS-RIAA-WNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~-~v~~-l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~- 77 (480)
.+|+|||+|.+|..++..+.....|++++ .+|.|++ ++.. .-.| .| +.-.+++++.++
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~G-vp-----------------V~~~~dL~~~v~~ 146 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDG-IP-----------------VYGISTINDHLID 146 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTC-CB-----------------EEEGGGHHHHC-C
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECC-eE-----------------EeCHHHHHHHHHH
Confidence 47999999999999998742111377766 5799987 5432 1111 11 222355666554
Q ss_pred -cCcEEEEeccC
Q 011654 78 -EADIVFVSVNT 88 (480)
Q Consensus 78 -~aDvVii~Vpt 88 (480)
+.|.+++|+|+
T Consensus 147 ~~Id~vIIAvPs 158 (212)
T 3keo_A 147 SDIETAILTVPS 158 (212)
T ss_dssp CSCCEEEECSCG
T ss_pred cCCCEEEEecCc
Confidence 58999999885
No 455
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.29 E-value=0.014 Score=53.64 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=29.9
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011654 3 KICCIGAGYVGGPTMAVIALKCPKIEVAVVDISV 36 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
.|+|||+|..|+++|..|+++ |++|+++|+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 599999999999999999998 99999999854
No 456
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.27 E-value=0.11 Score=49.95 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=61.2
Q ss_pred HhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCC
Q 011654 317 SMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPA 396 (480)
Q Consensus 317 ~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
..+..+++++|.|+|-+- .-..+++..|...|++|.+.+-.
T Consensus 153 ~~~i~l~Gk~vvVvGrs~---------iVG~p~A~lL~~~gAtVtv~h~~------------------------------ 193 (285)
T 3p2o_A 153 AYEIDLEGKDAVIIGASN---------IVGRPMATMLLNAGATVSVCHIK------------------------------ 193 (285)
T ss_dssp HTTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTT------------------------------
T ss_pred HhCCCCCCCEEEEECCCc---------hHHHHHHHHHHHCCCeEEEEeCC------------------------------
Confidence 344568999999999531 24788999999999999997632
Q ss_pred CCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcC
Q 011654 397 SKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGR 447 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
..++++.++.||+||.+|..+.|- +.+ .+++.++|||.-
T Consensus 194 ------t~~L~~~~~~ADIVI~Avg~p~~I--~~~----~vk~GavVIDVg 232 (285)
T 3p2o_A 194 ------TKDLSLYTRQADLIIVAAGCVNLL--RSD----MVKEGVIVVDVG 232 (285)
T ss_dssp ------CSCHHHHHTTCSEEEECSSCTTCB--CGG----GSCTTEEEEECC
T ss_pred ------chhHHHHhhcCCEEEECCCCCCcC--CHH----HcCCCeEEEEec
Confidence 135678899999999999999873 332 346677999985
No 457
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.27 E-value=0.065 Score=54.21 Aligned_cols=140 Identities=11% Similarity=-0.012 Sum_probs=81.0
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCC-CCCCCCCC--CCCC
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDH-PIHLQPMS--PPAS 397 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~ 397 (480)
.+.+.+|+|+|.. .-.+..++.|...|++|.+||+.....+...+++. .+-. +....++. .+.+
T Consensus 187 ~v~~~kV~ViG~G----------~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~---~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAG----------VAGLQAIATARRLGAVVSATDVRPAAKEQVASLGA---KFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTC---EECCCCC------------
T ss_pred CcCCCEEEEECCc----------HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---ceeecccccccccccccch
Confidence 3578899999974 37889999999999999999998876444333321 1000 00000000 0000
Q ss_pred -Ccee------eecCHHHhcccccEEEEEecccccc--cccHHHHHHhcCCCCEEEEcC----CCCCh----HHHhhcCc
Q 011654 398 -KQVN------VVWDAYQAAKDAHGVCILTEWDEFK--TLDYQKIFDNMRKPAYIFDGR----NILDV----EKLREIGF 460 (480)
Q Consensus 398 -~~~~------~~~~~~~a~~~ad~vvi~t~h~~~~--~~~~~~~~~~~~~~~~i~D~~----~~~~~----~~~~~~g~ 460 (480)
..++ -..++.++++++|+||-.+-.|.=+ .+=.++..+.|++..+|||.. +.++- +.....|+
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV 333 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGV 333 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTE
T ss_pred hhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCE
Confidence 0000 0136788999999998764333211 122256778999888999996 34432 11234677
Q ss_pred EEEEecC-CCCcCc
Q 011654 461 IVYSIGK-PLDPWH 473 (480)
Q Consensus 461 ~y~~iG~-~~~~~~ 473 (480)
.++|+-. +...|.
T Consensus 334 ~~~gv~nlP~~vp~ 347 (405)
T 4dio_A 334 RIVGHLNVAGRIAA 347 (405)
T ss_dssp EEEECSSGGGGGHH
T ss_pred EEEEeCCCCccCHH
Confidence 7777643 333343
No 458
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.27 E-value=0.17 Score=49.05 Aligned_cols=97 Identities=13% Similarity=0.085 Sum_probs=61.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEE-ecCHHHH-hccC
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFF-STDIEKH-VAEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~-t~d~~~a-~~~a 79 (480)
++|..||||..|.+. ..+++. +|.+|+++|++++.++..++. .....-.++++ ..|..+. -...
T Consensus 124 ~rVLDIGcG~G~~ta-~~lA~~-~ga~V~gIDis~~~l~~Ar~~------------~~~~gl~~v~~v~gDa~~l~d~~F 189 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTG-ILLSHV-YGMRVNVVEIEPDIAELSRKV------------IEGLGVDGVNVITGDETVIDGLEF 189 (298)
T ss_dssp CEEEEECCCSSCHHH-HHHHHT-TCCEEEEEESSHHHHHHHHHH------------HHHHTCCSEEEEESCGGGGGGCCC
T ss_pred CEEEEECCCccHHHH-HHHHHc-cCCEEEEEECCHHHHHHHHHH------------HHhcCCCCeEEEECchhhCCCCCc
Confidence 589999999976543 334543 488999999999988876641 11100024443 2333331 1467
Q ss_pred cEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEec
Q 011654 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKS 127 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
|+|+++... +| ...+++++.+.+++|..++...
T Consensus 190 DvV~~~a~~------------~d---~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAALA------------EP---KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTTC------------SC---HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCc------------cC---HHHHHHHHHHHcCCCcEEEEEc
Confidence 999986431 12 2577889999999988776654
No 459
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.24 E-value=0.061 Score=49.92 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=29.9
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
++|.|||.|.+|..-+..|.+. |.+|++++.+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~ 64 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTV 64 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCC
Confidence 5799999999999999999998 89999998753
No 460
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.23 E-value=0.017 Score=56.95 Aligned_cols=73 Identities=18% Similarity=0.156 Sum_probs=48.8
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH----HHHHHHH---CCCCCCCCCChHHHHHhhcCCCEEEecCHH
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISV----SRIAAWN---GDQLPIYEPGLEDVVTQCRGRNLFFSTDIE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~----~~v~~l~---~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~ 73 (480)
|+|.|.|+ |.+|..++..|.+. |++|++++|++ ++.+.+. .....+.. +.+.-..++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~------------~Dl~d~~~l~ 76 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVY------------GLINEQEAME 76 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEE------------CCTTCHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEE------------eecCCHHHHH
Confidence 58999997 99999999999998 89999999976 4444322 11111110 1111112344
Q ss_pred HHhc--cCcEEEEeccC
Q 011654 74 KHVA--EADIVFVSVNT 88 (480)
Q Consensus 74 ~a~~--~aDvVii~Vpt 88 (480)
++++ ++|+||-+.+.
T Consensus 77 ~~~~~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 77 KILKEHEIDIVVSTVGG 93 (346)
T ss_dssp HHHHHTTCCEEEECCCG
T ss_pred HHHhhCCCCEEEECCch
Confidence 5667 89999999753
No 461
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.22 E-value=0.044 Score=54.46 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=26.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEe
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVD 33 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|+||+|+|.|++|.-+...|..+ |.++|+.+.
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-p~veivain 48 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-NDITVVAIN 48 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-SSCEEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-CCeEEEEec
Confidence 46999999999999999998875 578877765
No 462
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=95.20 E-value=0.037 Score=57.07 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=69.9
Q ss_pred CCC-CEEEEEeeccCCCCCcccCChHHHHHHHHHhC------CCEEEEECCCC-ChHHHHHhhhccccCCCCCCCCCCCC
Q 011654 322 VSG-KKIAILGFAFKKDTGDTRETPAIDVCKGLLGD------KAKLSIYDPQV-TEDQIQRDLSMKKFDWDHPIHLQPMS 393 (480)
Q Consensus 322 ~~~-~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~------g~~V~~~DP~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (480)
+++ ++|+|+|+ .+....++..|++. |.+|.+.+..- ........++
T Consensus 51 L~GiKkIgIIGl----------GsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G---------------- 104 (525)
T 3fr7_A 51 FKGIKQIGVIGW----------GSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAG---------------- 104 (525)
T ss_dssp TTTCSEEEEECC----------TTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTT----------------
T ss_pred hcCCCEEEEEeE----------hHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCC----------------
Confidence 578 99999997 46888999999888 99988665432 2222222222
Q ss_pred CCCCCceee----ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCC
Q 011654 394 PPASKQVNV----VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 394 ~~~~~~~~~----~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~ 450 (480)
+.. ..++.+++++||+|+++++-....++ +.++...|++.++|..+.++.
T Consensus 105 ------~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eV-l~eI~p~LK~GaILs~AaGf~ 158 (525)
T 3fr7_A 105 ------FTEESGTLGDIWETVSGSDLVLLLISDAAQADN-YEKIFSHMKPNSILGLSHGFL 158 (525)
T ss_dssp ------CCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHH-HHHHHHHSCTTCEEEESSSHH
T ss_pred ------CEEecCCCCCHHHHHhcCCEEEECCChHHHHHH-HHHHHHhcCCCCeEEEeCCCC
Confidence 221 25789999999999999988766552 457888998888898888864
No 463
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.15 E-value=0.095 Score=50.27 Aligned_cols=82 Identities=15% Similarity=0.108 Sum_probs=61.9
Q ss_pred HHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCC
Q 011654 315 VSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
++..+..+++++|.|+|-+- .-...++..|...|++|++.+-.
T Consensus 152 L~~~~i~l~Gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~---------------------------- 194 (285)
T 3l07_A 152 LREYGIKTEGAYAVVVGASN---------VVGKPVSQLLLNAKATVTTCHRF---------------------------- 194 (285)
T ss_dssp HHHTTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTT----------------------------
T ss_pred HHHhCCCCCCCEEEEECCCc---------hhHHHHHHHHHHCCCeEEEEeCC----------------------------
Confidence 33444578999999999521 35788999999999999986432
Q ss_pred CCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcC
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGR 447 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
..++++.++.||+||.+|..+.| ++.++ +++.++|||.-
T Consensus 195 --------t~~L~~~~~~ADIVI~Avg~p~~--I~~~~----vk~GavVIDvg 233 (285)
T 3l07_A 195 --------TTDLKSHTTKADILIVAVGKPNF--ITADM----VKEGAVVIDVG 233 (285)
T ss_dssp --------CSSHHHHHTTCSEEEECCCCTTC--BCGGG----SCTTCEEEECC
T ss_pred --------chhHHHhcccCCEEEECCCCCCC--CCHHH----cCCCcEEEEec
Confidence 13567889999999999999887 34333 36667999985
No 464
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.14 E-value=0.017 Score=58.18 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=52.3
Q ss_pred cEEEEEcCChhHHHHH-HHHHHcCCCCeEEEEeCCHHHHHHHHCCC-CCCCCCChHHHHHhhcCCCEEEe-c---CHHHH
Q 011654 2 VKICCIGAGYVGGPTM-AVIALKCPKIEVAVVDISVSRIAAWNGDQ-LPIYEPGLEDVVTQCRGRNLFFS-T---DIEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA-~~La~~~~G~~V~~~D~~~~~v~~l~~~~-~~~~e~~l~~l~~~~~~~~l~~t-~---d~~~a 75 (480)
||+..+|+|++|..+- ..|.+. |++|+..|+|+..+++|++.+ -.+..-|.++....+ .++++. + +.-+.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~--g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v--~~v~ai~s~~~~~~~~ 76 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA--GIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV--SGVNAVSSIGDDVVDL 76 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT--TCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEE--ESCEEEETTSSHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHc--CCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEE--EEEEEEeCcHHHHHHH
Confidence 8999999999996655 455566 999999999999999999642 122211211100000 123322 1 13335
Q ss_pred hccCcEEEEecc
Q 011654 76 VAEADIVFVSVN 87 (480)
Q Consensus 76 ~~~aDvVii~Vp 87 (480)
+.++|+|.++|+
T Consensus 77 i~~adlitT~vG 88 (382)
T 3h2z_A 77 IAQVDLVTTAVG 88 (382)
T ss_dssp HTTCSEEEECCC
T ss_pred HcCCCEEEECCC
Confidence 679999988876
No 465
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.14 E-value=0.05 Score=53.73 Aligned_cols=42 Identities=29% Similarity=0.398 Sum_probs=31.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eC-CHHHHHHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVV-DI-SVSRIAAWN 43 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~-~~~~v~~l~ 43 (480)
|+||+|+|.|++|.-+.+.|..+ |..+|+++ |. +++....+-
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~-~~veivain~~~~~~~~~~ll 44 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN-PDIEVVAVNDLTDANTLAHLL 44 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC-TTEEEEEEECSSCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhCC-CCeEEEEEeCCCCHHHHHHHh
Confidence 78999999999999999988765 56777765 43 455544443
No 466
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.14 E-value=0.019 Score=57.14 Aligned_cols=32 Identities=22% Similarity=0.630 Sum_probs=26.0
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCC-----CCeEEEEe
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCP-----KIEVAVVD 33 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~-----G~~V~~~D 33 (480)
||||+|+| .|++|.-+...|.++ + .++++.+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~ 46 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALT 46 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEE
Confidence 46999999 899999999999876 2 34777664
No 467
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.08 E-value=0.12 Score=53.22 Aligned_cols=117 Identities=8% Similarity=-0.021 Sum_probs=73.9
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHH--HHHhhh---ccccCCCCCCCCCCCCCCCC
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQ--IQRDLS---MKKFDWDHPIHLQPMSPPAS 397 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~ 397 (480)
.-++|+|+|+.. ....|+..|.+.|.+|.+||....... +...+. ..+. .+.. +.....
T Consensus 53 ~i~kVaVIGaG~----------MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~-l~~~-----~~~~~~ 116 (460)
T 3k6j_A 53 DVNSVAIIGGGT----------MGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKR-LNDK-----RIEKIN 116 (460)
T ss_dssp CCCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTS-CCHH-----HHHHHH
T ss_pred cCCEEEEECCCH----------HHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCC-CCHH-----HHHHHh
Confidence 347999999865 889999999999999999999754100 000000 0000 0000 000012
Q ss_pred CceeeecCHHHhcccccEEEEEeccc-ccccccHHHHHHhcCCCCEEEEcCCCCChHHHh
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWD-EFKTLDYQKIFDNMRKPAYIFDGRNILDVEKLR 456 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~-~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
.+++..++++ ++++||.||.++.=+ +.+.--++++.+.+++.++|.+....++...+.
T Consensus 117 ~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia 175 (460)
T 3k6j_A 117 ANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEIS 175 (460)
T ss_dssp TTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHH
T ss_pred cceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHH
Confidence 3567777875 799999999998643 333323466777777777777887778776654
No 468
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.05 E-value=0.22 Score=43.27 Aligned_cols=114 Identities=12% Similarity=0.161 Sum_probs=66.6
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHh----c
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHV----A 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~----~ 77 (480)
++|.-||+|. |. ++..+++..++.+|+++|++++.++..++... ..++ ..++.+..|..+.+ .
T Consensus 27 ~~vldiG~G~-G~-~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~--------~~~~~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 27 ETLWDIGGGS-GS-IAIEWLRSTPQTTAVCFEISEERRERILSNAI---NLGV--------SDRIAVQQGAPRAFDDVPD 93 (178)
T ss_dssp EEEEEESTTT-TH-HHHHHHTTSSSEEEEEECSCHHHHHHHHHHHH---TTTC--------TTSEEEECCTTGGGGGCCS
T ss_pred CeEEEeCCCC-CH-HHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHH---HhCC--------CCCEEEecchHhhhhccCC
Confidence 3788999997 44 44555655457899999999998887664200 0000 11333333432223 4
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
..|+|++.-+... ...++.+.+.++++..+++.. ........+...+++.+
T Consensus 94 ~~D~i~~~~~~~~----------------~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 94 NPDVIFIGGGLTA----------------PGVFAAAWKRLPVGGRLVANA-VTVESEQMLWALRKQFG 144 (178)
T ss_dssp CCSEEEECC-TTC----------------TTHHHHHHHTCCTTCEEEEEE-CSHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCcccH----------------HHHHHHHHHhcCCCCEEEEEe-eccccHHHHHHHHHHcC
Confidence 5899987643210 346777888898877766533 33344445556666553
No 469
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.05 E-value=0.008 Score=60.12 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=25.7
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+||| .||+|.-+...|.++ |..++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~ 39 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEE
Confidence 4799999 699999999988775 667877664
No 470
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.05 E-value=0.008 Score=60.12 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=25.7
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEe
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+||| .||+|.-+...|.++ |..++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~ 39 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEE
Confidence 4799999 699999999988775 667877664
No 471
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.03 E-value=0.084 Score=51.48 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=29.8
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDIS 35 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||+|.|.| .|.+|..++..|++. |++|+++|++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCC
Confidence 78999999 699999999999998 9999999974
No 472
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.02 E-value=0.02 Score=55.52 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=46.8
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHH-HHHH---HHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 3 KICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVS-RIAA---WNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~-~v~~---l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
+|.|.|+ |.+|..++..|.+. |++|++++|+++ +.+. +......+.. +.+.-..++.++++
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~------------~Dl~d~~~l~~a~~ 78 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVK------------GELDEHEKLVELMK 78 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred eEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEE------------ecCCCHHHHHHHHc
Confidence 7999995 99999999999998 999999999864 2222 2211111100 11100123455678
Q ss_pred cCcEEEEecc
Q 011654 78 EADIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||.+.+
T Consensus 79 ~~d~vi~~a~ 88 (318)
T 2r6j_A 79 KVDVVISALA 88 (318)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 8999999875
No 473
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.99 E-value=0.19 Score=52.17 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=71.1
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.- -...+++.|+..|++|.++|+..........+ +.
T Consensus 271 ~l~GktV~IiG~G~----------IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~----------------------Ga 318 (494)
T 3ce6_A 271 LIGGKKVLICGYGD----------VGKGCAEAMKGQGARVSVTEIDPINALQAMME----------------------GF 318 (494)
T ss_dssp CCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----------------------TC
T ss_pred CCCcCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----------------------CC
Confidence 46899999999744 67889999999999999999975442222222 12
Q ss_pred eeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCC---CChHHHh
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNI---LDVEKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~---~~~~~~~ 456 (480)
.+ .+++++++++|+|+.+|.-+.. ++ .+..+.|++.++|++.-.. ++...+.
T Consensus 319 ~~-~~l~e~l~~aDvVi~atgt~~~--i~-~~~l~~mk~ggilvnvG~~~~eId~~aL~ 373 (494)
T 3ce6_A 319 DV-VTVEEAIGDADIVVTATGNKDI--IM-LEHIKAMKDHAILGNIGHFDNEIDMAGLE 373 (494)
T ss_dssp EE-CCHHHHGGGCSEEEECSSSSCS--BC-HHHHHHSCTTCEEEECSSSGGGBCHHHHH
T ss_pred EE-ecHHHHHhCCCEEEECCCCHHH--HH-HHHHHhcCCCcEEEEeCCCCCccCHHHHH
Confidence 22 3677889999999999876653 33 3456778888899987652 4544443
No 474
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.96 E-value=0.034 Score=47.47 Aligned_cols=90 Identities=12% Similarity=0.108 Sum_probs=63.5
Q ss_pred CCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHH-HHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 324 GKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQ-IQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+++|+|+|... .+..++..|.+.|++|.++|......+ +...++ ..+..
T Consensus 21 ~~~v~iiG~G~----------iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------------------~~~~~ 70 (144)
T 3oj0_A 21 GNKILLVGNGM----------LASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------------------YEYVL 70 (144)
T ss_dssp CCEEEEECCSH----------HHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------------------CEEEE
T ss_pred CCEEEEECCCH----------HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------------------CceEe
Confidence 78999999754 778899999999999999998654322 122221 12234
Q ss_pred ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCC
Q 011654 403 VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.++++++++++|+|+.+|..+... ++. +.+++..+|+|.-.
T Consensus 71 ~~~~~~~~~~~Divi~at~~~~~~-~~~----~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 71 INDIDSLIKNNDVIITATSSKTPI-VEE----RSLMPGKLFIDLGN 111 (144)
T ss_dssp CSCHHHHHHTCSEEEECSCCSSCS-BCG----GGCCTTCEEEECCS
T ss_pred ecCHHHHhcCCCEEEEeCCCCCcE-eeH----HHcCCCCEEEEccC
Confidence 568889999999999999976532 222 33455678999865
No 475
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.96 E-value=0.022 Score=56.30 Aligned_cols=78 Identities=19% Similarity=0.209 Sum_probs=45.7
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCC-------CCeEE-EEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCE-EEec--
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCP-------KIEVA-VVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNL-FFST-- 70 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~-------G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l-~~t~-- 70 (480)
+||+|||+|.||..++..|.++ + +.+|+ ++|+++++.+.. -.++++......+.+ .+++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~-~~~~~~g~~~~vvaV~d~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 76 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSF-NEENRLGLKFNVVFVADSLHSYYNER---------IDIGKVISYKEKGSLDSLEYES 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCSSSEEEEEEEEECSSCEEECTT---------CCHHHHHHHHHTTCGGGCCSEE
T ss_pred EeEEEEecCHHHHHHHHHHHhC-hHHHhcCCcEEEEEEEECChHHhhcc---------cChHHHhhhhccCCcccccCCC
Confidence 5799999999999999998764 1 24554 568776432210 011111110001112 1344
Q ss_pred -CHHHHh-ccCcEEEEeccCC
Q 011654 71 -DIEKHV-AEADIVFVSVNTP 89 (480)
Q Consensus 71 -d~~~a~-~~aDvVii~Vptp 89 (480)
|+++.+ .+.|+|++|+|+.
T Consensus 77 ~d~~~ll~~~iDvVv~~t~~~ 97 (331)
T 3c8m_A 77 ISASEALARDFDIVVDATPAS 97 (331)
T ss_dssp CCHHHHHHSSCSEEEECSCCC
T ss_pred CCHHHHhCCCCCEEEECCCCC
Confidence 777755 3689999998763
No 476
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.94 E-value=0.064 Score=51.36 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=72.2
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+++++|+|+|.. ..+..++..|.+.|++|.++|...... ..+.. ..++
T Consensus 126 ~~~~~~v~iiGaG----------~~g~aia~~L~~~g~~V~v~~r~~~~~---~~l~~------------------~~g~ 174 (275)
T 2hk9_A 126 EVKEKSILVLGAG----------GASRAVIYALVKEGAKVFLWNRTKEKA---IKLAQ------------------KFPL 174 (275)
T ss_dssp TGGGSEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSSHHHH---HHHTT------------------TSCE
T ss_pred CcCCCEEEEECch----------HHHHHHHHHHHHcCCEEEEEECCHHHH---HHHHH------------------HcCC
Confidence 4578899999964 378889999999999999999864321 11210 0123
Q ss_pred eeecCHHHhcccccEEEEEecccccccccHHHH-HHhcCCCCEEEEcCCCCChH---HHhhcCcEE
Q 011654 401 NVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKI-FDNMRKPAYIFDGRNILDVE---KLREIGFIV 462 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~-~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y 462 (480)
...+++.++++++|+||.+|+-..+.+... .+ .+.+++..+|+|.-. ...+ ..++.|+++
T Consensus 175 ~~~~~~~~~~~~aDiVi~atp~~~~~~~~~-~i~~~~l~~g~~viDv~~-~~t~ll~~a~~~g~~~ 238 (275)
T 2hk9_A 175 EVVNSPEEVIDKVQVIVNTTSVGLKDEDPE-IFNYDLIKKDHVVVDIIY-KETKLLKKAKEKGAKL 238 (275)
T ss_dssp EECSCGGGTGGGCSEEEECSSTTSSTTCCC-SSCGGGCCTTSEEEESSS-SCCHHHHHHHHTTCEE
T ss_pred eeehhHHhhhcCCCEEEEeCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC-ChHHHHHHHHHCcCEE
Confidence 444577888899999999998876532110 01 234566679999988 4432 234557765
No 477
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.94 E-value=0.12 Score=49.84 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=61.4
Q ss_pred HHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC
Q 011654 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+..+..+++++|.|+|-+- .-..+++..|.+.|++|++.+-...
T Consensus 157 ~~~~i~l~Gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~~~~T~--------------------------- 200 (300)
T 4a26_A 157 KRCGIEMAGKRAVVLGRSN---------IVGAPVAALLMKENATVTIVHSGTS--------------------------- 200 (300)
T ss_dssp HHHTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTTSC---------------------------
T ss_pred HHcCCCCCCCEEEEECCCc---------hHHHHHHHHHHHCCCeEEEEeCCCC---------------------------
Confidence 3344578999999999532 3578999999999999999875321
Q ss_pred CCCceeeecCHH--HhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCC
Q 011654 396 ASKQVNVVWDAY--QAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 396 ~~~~~~~~~~~~--~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
+++ +.++.||+||.+|..+.|-.-+ .+++.++|||.--
T Consensus 201 ---------~l~l~~~~~~ADIVI~Avg~p~~I~~~------~vk~GavVIDvgi 240 (300)
T 4a26_A 201 ---------TEDMIDYLRTADIVIAAMGQPGYVKGE------WIKEGAAVVDVGT 240 (300)
T ss_dssp ---------HHHHHHHHHTCSEEEECSCCTTCBCGG------GSCTTCEEEECCC
T ss_pred ---------CchhhhhhccCCEEEECCCCCCCCcHH------hcCCCcEEEEEec
Confidence 234 7899999999999998864322 2466779999853
No 478
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.93 E-value=0.023 Score=53.98 Aligned_cols=73 Identities=10% Similarity=0.176 Sum_probs=46.9
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhccCcE
Q 011654 3 KICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVAEADI 81 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
||.|.|+ |.+|..++..|+++.+|++|+++++++++.+.+......+.. +.+.-..++.++++++|+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~d~~~~~~~~~~~d~ 68 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ------------ADYGDEAALTSALQGVEK 68 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCSE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEE------------cCCCCHHHHHHHHhCCCE
Confidence 5889996 999999999998743379999999987765544321111100 111001224456778999
Q ss_pred EEEecc
Q 011654 82 VFVSVN 87 (480)
Q Consensus 82 Vii~Vp 87 (480)
||-+..
T Consensus 69 vi~~a~ 74 (286)
T 2zcu_A 69 LLLISS 74 (286)
T ss_dssp EEECC-
T ss_pred EEEeCC
Confidence 998865
No 479
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.91 E-value=0.1 Score=45.02 Aligned_cols=115 Identities=11% Similarity=-0.046 Sum_probs=67.3
Q ss_pred cCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHH-hhhccccCCCCCCCCCCCCCCCCCc
Q 011654 321 TVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQR-DLSMKKFDWDHPIHLQPMSPPASKQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
...+.+|+|+|... -+..+++.|.+.|++|.++|+.....+... .++ ..+ ...+
T Consensus 16 ~~~~~~v~IiG~G~----------iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g---~~~------------~~~d 70 (155)
T 2g1u_A 16 KQKSKYIVIFGCGR----------LGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFS---GFT------------VVGD 70 (155)
T ss_dssp -CCCCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCC---SEE------------EESC
T ss_pred ccCCCcEEEECCCH----------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCC---CcE------------EEec
Confidence 45678999999755 778999999999999999998643211100 000 000 0000
Q ss_pred eeeecCHHHh-cccccEEEEEecccccccccHHHHHHh-cCCCCEEEEcCCCCChHHHhhcCcE
Q 011654 400 VNVVWDAYQA-AKDAHGVCILTEWDEFKTLDYQKIFDN-MRKPAYIFDGRNILDVEKLREIGFI 461 (480)
Q Consensus 400 ~~~~~~~~~a-~~~ad~vvi~t~h~~~~~~~~~~~~~~-~~~~~~i~D~~~~~~~~~~~~~g~~ 461 (480)
..-.+.+.++ ++++|+|+++|+.++.... ...+... .+...+|....+.-..+.+++.|..
T Consensus 71 ~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~-~~~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~ 133 (155)
T 2g1u_A 71 AAEFETLKECGMEKADMVFAFTNDDSTNFF-ISMNARYMFNVENVIARVYDPEKIKIFEENGIK 133 (155)
T ss_dssp TTSHHHHHTTTGGGCSEEEECSSCHHHHHH-HHHHHHHTSCCSEEEEECSSGGGHHHHHTTTCE
T ss_pred CCCHHHHHHcCcccCCEEEEEeCCcHHHHH-HHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCc
Confidence 0000112333 6789999999998764332 2233333 3344577777776666666666654
No 480
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.90 E-value=0.099 Score=51.09 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=52.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC---HHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEEe--cCH---
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKI-EVAVVDIS---VSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFFS--TDI--- 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~---~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t--~d~--- 72 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|+ .++.+.+.+. +-.. ....+.+. .+.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~--G~~~v~v~nRt~~~~~~a~~la~~-----------~~~~-~~~~v~~~~~~~l~~~ 214 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE--GIKEIKLFNRKDDFFEKAVAFAKR-----------VNEN-TDCVVTVTDLADQHAF 214 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTHHHHHHHHHHH-----------HHHH-SSCEEEEEETTCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCEEEEEECCCchHHHHHHHHHH-----------hhhc-cCcceEEechHhhhhh
Confidence 4789999999999999999998 77 89999999 8777776531 1000 00112222 232
Q ss_pred HHHhccCcEEEEeccCCC
Q 011654 73 EKHVAEADIVFVSVNTPT 90 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~ 90 (480)
.+.+.++|+||-|+|...
T Consensus 215 ~~~l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 215 TEALASADILTNGTKVGM 232 (312)
T ss_dssp HHHHHHCSEEEECSSTTS
T ss_pred HhhccCceEEEECCcCCC
Confidence 445788999999977543
No 481
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.88 E-value=0.025 Score=54.35 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=47.7
Q ss_pred cEEEEEcC-ChhHHHHHHHHHHcCCC-CeEEEEeCCHHHH--HHHHCCCCCCCCCChHHHHHhhcCCCEEEecCHHHHhc
Q 011654 2 VKICCIGA-GYVGGPTMAVIALKCPK-IEVAVVDISVSRI--AAWNGDQLPIYEPGLEDVVTQCRGRNLFFSTDIEKHVA 77 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G-~~V~~~D~~~~~v--~~l~~~~~~~~e~~l~~l~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+|.|.|+ |.+|..++..|++. | ++|++.++++++. +.+......+.. +.+.-..++.++++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQ------------GDQDDQVIMELALN 71 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEE------------ecCCCHHHHHHHHh
Confidence 58999997 99999999999988 7 9999999987643 223221111000 11100123445678
Q ss_pred cCcEEEEecc
Q 011654 78 EADIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||.+.+
T Consensus 72 ~~d~vi~~a~ 81 (299)
T 2wm3_A 72 GAYATFIVTN 81 (299)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 8999999864
No 482
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.87 E-value=0.083 Score=52.03 Aligned_cols=41 Identities=17% Similarity=0.324 Sum_probs=31.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEe-C-CHHHHHHH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVD-I-SVSRIAAW 42 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D-~-~~~~v~~l 42 (480)
|+||+|+|.|++|.-+.+.|..+ |..+|+++. . +++.+..+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~-~~veiv~i~~~~~~~~~a~l 43 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR-SDIEIVAINDLLDADYMAYM 43 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSCHHHHHHH
T ss_pred CeEEEEECcCHHHHHHHHHHHcC-CCeEEEEEcCCCChhHHhHh
Confidence 57999999999999999988876 567877664 3 45554433
No 483
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.84 E-value=0.026 Score=59.22 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=32.6
Q ss_pred CcEEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 011654 1 MVKICCIG-AGYVGGPTMAVIALKCPKIEVAVVDISVSR 38 (480)
Q Consensus 1 imkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
+|||.|.| .|++|..++..|.+. |++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCC
Confidence 58999999 699999999999998 9999999998653
No 484
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.84 E-value=0.14 Score=43.83 Aligned_cols=108 Identities=17% Similarity=0.154 Sum_probs=72.9
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+.++|+|+|+|-++ ++.+..+++.|.+.|++|.--+|....+++ .++..
T Consensus 12 ~p~~vaVvGas~~~------g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i-------------------------~G~~~ 60 (140)
T 1iuk_A 12 QAKTIAVLGAHKDP------SRPAHYVPRYLREQGYRVLPVNPRFQGEEL-------------------------FGEEA 60 (140)
T ss_dssp HCCEEEEETCCSST------TSHHHHHHHHHHHTTCEEEEECGGGTTSEE-------------------------TTEEC
T ss_pred CCCEEEEECCCCCC------CChHHHHHHHHHHCCCEEEEeCCCcccCcC-------------------------CCEEe
Confidence 36799999998776 578999999999999997777775211111 23455
Q ss_pred ecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCCChH---HHhhcCcEEEE
Q 011654 403 VWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNILDVE---KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~g~~y~~ 464 (480)
..|+.+.-+..|+++|.+.-+.-.+. .+++.+. ....+++. .+....+ .+++.|+++.|
T Consensus 61 ~~sl~el~~~vDlavi~vp~~~~~~v-~~~~~~~-gi~~i~~~-~g~~~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 61 VASLLDLKEPVDILDVFRPPSALMDH-LPEVLAL-RPGLVWLQ-SGIRHPEFEKALKEAGIPVVA 122 (140)
T ss_dssp BSSGGGCCSCCSEEEECSCHHHHTTT-HHHHHHH-CCSCEEEC-TTCCCHHHHHHHHHTTCCEEE
T ss_pred cCCHHHCCCCCCEEEEEeCHHHHHHH-HHHHHHc-CCCEEEEc-CCcCHHHHHHHHHHcCCEEEc
Confidence 56788877789999999887554442 2344444 23345554 5666644 34467998876
No 485
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.82 E-value=0.17 Score=48.57 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=61.6
Q ss_pred HHHhcCcCCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCC
Q 011654 315 VSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
++..+-++++++|.|+|-+- .-..+++..|...|++|++.+-.
T Consensus 152 L~~~~i~l~Gk~vvVvGrs~---------iVG~plA~lL~~~gAtVtv~hs~---------------------------- 194 (286)
T 4a5o_A 152 LASTGADLYGMDAVVVGASN---------IVGRPMALELLLGGCTVTVTHRF---------------------------- 194 (286)
T ss_dssp HHHTTCCCTTCEEEEECTTS---------TTHHHHHHHHHHTTCEEEEECTT----------------------------
T ss_pred HHHhCCCCCCCEEEEECCCc---------hhHHHHHHHHHHCCCeEEEEeCC----------------------------
Confidence 33344578999999999532 35788999999999999986432
Q ss_pred CCCCceeeecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcC
Q 011654 395 PASKQVNVVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGR 447 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~ 447 (480)
..++++.++.||+||.++..+.|- +.++ .++.++|||.-
T Consensus 195 --------T~~L~~~~~~ADIVI~Avg~p~~I--~~~~----vk~GavVIDvg 233 (286)
T 4a5o_A 195 --------TRDLADHVSRADLVVVAAGKPGLV--KGEW----IKEGAIVIDVG 233 (286)
T ss_dssp --------CSCHHHHHHTCSEEEECCCCTTCB--CGGG----SCTTCEEEECC
T ss_pred --------CcCHHHHhccCCEEEECCCCCCCC--CHHH----cCCCeEEEEec
Confidence 125678899999999999998773 3322 36667999975
No 486
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.81 E-value=0.023 Score=50.15 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 011654 1 MVKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISV 36 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|++|.|||.|..|+.+|..|++. |.+|+++++++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~--g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA--GLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 57899999999999999999998 99999999865
No 487
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.74 E-value=0.11 Score=51.24 Aligned_cols=42 Identities=21% Similarity=0.380 Sum_probs=31.4
Q ss_pred cEEEEEcCChhHHHHHHHHHHcC-CCCeEEEEe-C-CHHHHHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIALKC-PKIEVAVVD-I-SVSRIAAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-~G~~V~~~D-~-~~~~v~~l~ 43 (480)
+||+|+|.|++|.-+.+.|..+. |.++|+.+. + +++....+-
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll 45 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL 45 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhc
Confidence 48999999999999999888752 468887654 3 555555443
No 488
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.73 E-value=0.14 Score=50.60 Aligned_cols=41 Identities=17% Similarity=0.347 Sum_probs=31.3
Q ss_pred cEEEEEcCChhHHHHHHHHHH---cCCCCeEEEEe-C-CHHHHHHHH
Q 011654 2 VKICCIGAGYVGGPTMAVIAL---KCPKIEVAVVD-I-SVSRIAAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~---~~~G~~V~~~D-~-~~~~v~~l~ 43 (480)
+||+|+|.|++|..+...|.. + |.++|+++. + +++....+-
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~-~~~eivai~~~~~~~~~~~ll 48 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLL 48 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGG-GTEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCC-CCEEEEEEeCCCCHHHHHHHh
Confidence 699999999999999999887 5 467877654 3 556555544
No 489
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.71 E-value=0.068 Score=55.53 Aligned_cols=108 Identities=14% Similarity=0.162 Sum_probs=68.4
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhC--CCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCC-----CC
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGD--KAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPP-----AS 397 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~--g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 397 (480)
.+|+|+|+.| ....++..|.+. |.+|.+||..-...+ .+.... .|+. .+.... ..
T Consensus 10 mkI~VIG~G~----------vG~~~A~~La~~g~g~~V~~~D~~~~~v~---~l~~g~----~~i~-e~gl~~~~~~~~~ 71 (481)
T 2o3j_A 10 SKVVCVGAGY----------VGGPTCAMIAHKCPHITVTVVDMNTAKIA---EWNSDK----LPIY-EPGLDEIVFAARG 71 (481)
T ss_dssp CEEEEECCST----------THHHHHHHHHHHCTTSEEEEECSCHHHHH---HHTSSS----CSSC-CTTHHHHHHHHBT
T ss_pred CEEEEECCCH----------HHHHHHHHHHhcCCCCEEEEEECCHHHHH---HHHCCC----CCcC-CCCHHHHHHHhhc
Confidence 5899999988 889999999988 799999997533221 221100 0110 000000 01
Q ss_pred CceeeecCHHHhcccccEEEEEeccccc-------cccc-------HHHHHHhcCCCCEEEEcCCCC
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDEF-------KTLD-------YQKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~~-------~~~~-------~~~~~~~~~~~~~i~D~~~~~ 450 (480)
.++..++++.++++++|+|+++++-+.- +..| .+.+...+++..+|+|...+.
T Consensus 72 ~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 72 RNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp TTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred CCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 2467778888999999999999766531 1122 245666777777999976544
No 490
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.71 E-value=0.12 Score=51.25 Aligned_cols=32 Identities=22% Similarity=0.272 Sum_probs=29.8
Q ss_pred cEEEEEc-CChhHHHHHHHHHHcCCCC-eEEEEeCC
Q 011654 2 VKICCIG-AGYVGGPTMAVIALKCPKI-EVAVVDIS 35 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~-~V~~~D~~ 35 (480)
|||.|.| .|.+|..++..|++. |+ +|+..|++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 8999999 699999999999998 88 99999984
No 491
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.71 E-value=0.095 Score=53.12 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=74.6
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCce-
Q 011654 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQV- 400 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 400 (480)
+.+++|+|+|.. .-++.+++.+...|++|.++|+.....+....++. .+-.... .... ....+.
T Consensus 170 l~g~~V~ViGaG----------~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa---~~~~~~~-~~~~-~~~~g~~ 234 (401)
T 1x13_A 170 VPPAKVMVIGAG----------VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGA---EFLELDF-KEEA-GSGDGYA 234 (401)
T ss_dssp ECCCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTC---EECCC----------CCHHH
T ss_pred cCCCEEEEECCC----------HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---EEEEecc-cccc-cccccch
Confidence 578999999963 36888999999999999999997654332233321 0000000 0000 000000
Q ss_pred ---e------eecCHHHhcccccEEEEEecccc--cccccHHHHHHhcCCCCEEEEcCC----CCCh---H--HHhhcCc
Q 011654 401 ---N------VVWDAYQAAKDAHGVCILTEWDE--FKTLDYQKIFDNMRKPAYIFDGRN----ILDV---E--KLREIGF 460 (480)
Q Consensus 401 ---~------~~~~~~~a~~~ad~vvi~t~h~~--~~~~~~~~~~~~~~~~~~i~D~~~----~~~~---~--~~~~~g~ 460 (480)
. +..++.+.++++|+|+..+.+|. -..+-..+..+.|++..+|+|.-. .++. . .+...|+
T Consensus 235 ~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv 314 (401)
T 1x13_A 235 KVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGV 314 (401)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSC
T ss_pred hhccHHHHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCE
Confidence 0 00135677889999999865652 112212345577998889999962 2332 1 1445677
Q ss_pred EEEEec
Q 011654 461 IVYSIG 466 (480)
Q Consensus 461 ~y~~iG 466 (480)
.++|+-
T Consensus 315 ~i~g~~ 320 (401)
T 1x13_A 315 KVIGYT 320 (401)
T ss_dssp EEECCS
T ss_pred EEEeeC
Confidence 777654
No 492
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.69 E-value=0.44 Score=42.65 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=69.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHCCCCCCCCCChHHHHHhhcCCCEEE-ecCHHHH---hc
Q 011654 2 VKICCIGAGYVGGPTMAVIALKCPKIEVAVVDISVSRIAAWNGDQLPIYEPGLEDVVTQCRGRNLFF-STDIEKH---VA 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~l~~~~~~~~l~~-t~d~~~a---~~ 77 (480)
.+|.-||+|. |. ++..+++.+++.+|+++|++++.++..++.. ......++++ ..|..+. ..
T Consensus 42 ~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 42 LVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNPQYLGFIRDNL------------KKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp CEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCHHHHHHHHHHH------------HHHTCTTEEEEECCTTTTCTTSC
T ss_pred CEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH------------HHhCCCcEEEEeCChhhhhhcCC
Confidence 3688999996 44 4555666644589999999999888776420 0000023332 2233221 24
Q ss_pred cCcEEEEeccCCCCcCCCCCCCCCChHHHHHHHHHHHhhCCCCCEEEEecCCccchHHHHHHHHHhcC
Q 011654 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIANVSNSNKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
..|+|++.-+.. + ....++.+.+.++++..++.. +....+.+.+.+.+++.+
T Consensus 108 ~~D~i~~~~~~~------------~---~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 108 DPDRVFIGGSGG------------M---LEEIIDAVDRRLKSEGVIVLN-AVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp CCSEEEESCCTT------------C---HHHHHHHHHHHCCTTCEEEEE-ECBHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCCc------------C---HHHHHHHHHHhcCCCeEEEEE-ecccccHHHHHHHHHHCC
Confidence 689988774321 1 356788888899988777653 233345556666776654
No 493
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.67 E-value=0.1 Score=50.57 Aligned_cols=105 Identities=11% Similarity=0.090 Sum_probs=67.2
Q ss_pred CCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceee
Q 011654 323 SGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
-.++|+|+|+.- ..-.++..|. +|++|.+||+.....+...+. + ......+++.
T Consensus 11 ~~~~V~vIG~G~----------MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~----l-----------~~~~~~~i~~ 64 (293)
T 1zej_A 11 HHMKVFVIGAGL----------MGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ----I-----------PEELLSKIEF 64 (293)
T ss_dssp -CCEEEEECCSH----------HHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH----S-----------CGGGGGGEEE
T ss_pred CCCeEEEEeeCH----------HHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH----H-----------HHHHhCCeEE
Confidence 468999999854 8899999999 999999999865432221111 0 0011135677
Q ss_pred ecCHHHhcccccEEEEEecccc-cccccHHHHHHhcCCCCEEEEcCCCCChHHHh
Q 011654 403 VWDAYQAAKDAHGVCILTEWDE-FKTLDYQKIFDNMRKPAYIFDGRNILDVEKLR 456 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~h~~-~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~ 456 (480)
.+++.+ +++||.||.++.-+. .+..-+.++... +.+++.+..+.+++..+.
T Consensus 65 ~~~~~~-~~~aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a 116 (293)
T 1zej_A 65 TTTLEK-VKDCDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIA 116 (293)
T ss_dssp ESSCTT-GGGCSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHH
T ss_pred eCCHHH-HcCCCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHH
Confidence 788876 899999999886644 232223344443 444665655557766554
No 494
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.63 E-value=0.065 Score=52.39 Aligned_cols=104 Identities=17% Similarity=0.228 Sum_probs=65.6
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec-
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW- 404 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 404 (480)
||+|+|+.. ....++..|.+.|.+|.+||....++.. ..+...+. .+... .....+...+
T Consensus 2 ~I~iiG~G~----------mG~~~a~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~---~~~~g-----~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGA----------MGSALSVPLVDNGNEVRIWGTEFDTEIL-KSISAGRE---HPRLG-----VKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCH----------HHHHHHHHHHHHCCEEEEECCGGGHHHH-HHHHTTCC---BTTTT-----BCCCSEEEECG
T ss_pred EEEEECcCH----------HHHHHHHHHHhCCCeEEEEEccCCHHHH-HHHHHhCc---CcccC-----ccccceEEecH
Confidence 799999855 8889999999999999999983222222 11111000 00000 0002234555
Q ss_pred -CHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCCCC
Q 011654 405 -DAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRNIL 450 (480)
Q Consensus 405 -~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~~~ 450 (480)
++.++++++|+|+++++.+...++ .+.+.. +++..+|+|..|-+
T Consensus 63 ~~~~~~~~~~D~vi~~v~~~~~~~v-~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLENAEVVLLGVSTDGVLPV-MSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTTCSEEEECSCGGGHHHH-HHHHTT-TCCSCEEEECCCSE
T ss_pred HhHHHHHhcCCEEEEcCChHHHHHH-HHHHhc-CCCCCEEEEEcCcC
Confidence 777889999999999988765442 244555 66556899998655
No 495
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.63 E-value=0.085 Score=49.70 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=63.9
Q ss_pred EEEEEeeccCCCCCcccCChHHHHHHHHHhCC-CEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCceeeec
Q 011654 326 KIAILGFAFKKDTGDTRETPAIDVCKGLLGDK-AKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVNVVW 404 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g-~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+|+|+|... ....++..|.+.| .+|.+||+.....+..... .++....
T Consensus 2 ~i~iiG~G~----------mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~---------------------~g~~~~~ 50 (263)
T 1yqg_A 2 NVYFLGGGN----------MAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE---------------------LGVETSA 50 (263)
T ss_dssp EEEEECCSH----------HHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH---------------------TCCEEES
T ss_pred EEEEECchH----------HHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh---------------------cCCEEeC
Confidence 799999754 7889999999999 9999999864322211110 1244556
Q ss_pred CHHHhcccccEEEEEecccccccccHHHHHHhcCC-CCEEEEcCCCCChHHHhh
Q 011654 405 DAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRK-PAYIFDGRNILDVEKLRE 457 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~-~~~i~D~~~~~~~~~~~~ 457 (480)
+..+++ ++|+|++++..... ..+...+.+ ..+|+|..+-++.+.+.+
T Consensus 51 ~~~~~~-~~D~vi~~v~~~~~-----~~v~~~l~~~~~ivv~~~~g~~~~~l~~ 98 (263)
T 1yqg_A 51 TLPELH-SDDVLILAVKPQDM-----EAACKNIRTNGALVLSVAAGLSVGTLSR 98 (263)
T ss_dssp SCCCCC-TTSEEEECSCHHHH-----HHHHTTCCCTTCEEEECCTTCCHHHHHH
T ss_pred CHHHHh-cCCEEEEEeCchhH-----HHHHHHhccCCCEEEEecCCCCHHHHHH
Confidence 777888 99999999983322 233333321 458999977777766553
No 496
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.61 E-value=0.24 Score=47.29 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=59.1
Q ss_pred CCCCEEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCCCCCCcee
Q 011654 322 VSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSPPASKQVN 401 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
+++++|.|+|-+- .-..+++..|.+.|++|++.+-..
T Consensus 148 l~Gk~vvVvG~s~---------iVG~plA~lL~~~gAtVtv~~~~t---------------------------------- 184 (276)
T 3ngx_A 148 YHENTVTIVNRSP---------VVGRPLSMMLLNRNYTVSVCHSKT---------------------------------- 184 (276)
T ss_dssp CCSCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTTC----------------------------------
T ss_pred cCCCEEEEEcCCh---------HHHHHHHHHHHHCCCeEEEEeCCc----------------------------------
Confidence 7999999999531 357889999999999999986321
Q ss_pred eecCHHHhcccccEEEEEecccccccccHHHHHHhcCCCCEEEEcCC
Q 011654 402 VVWDAYQAAKDAHGVCILTEWDEFKTLDYQKIFDNMRKPAYIFDGRN 448 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~h~~~~~~~~~~~~~~~~~~~~i~D~~~ 448 (480)
.++.+.++.||+||.+|..+.+-.-+ ..++.++|||.--
T Consensus 185 --~~L~~~~~~ADIVI~Avg~p~~I~~~------~vk~GavVIDvgi 223 (276)
T 3ngx_A 185 --KDIGSMTRSSKIVVVAVGRPGFLNRE------MVTPGSVVIDVGI 223 (276)
T ss_dssp --SCHHHHHHHSSEEEECSSCTTCBCGG------GCCTTCEEEECCC
T ss_pred --ccHHHhhccCCEEEECCCCCccccHh------hccCCcEEEEecc
Confidence 35678899999999999998764323 2366679999853
No 497
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.61 E-value=0.088 Score=51.77 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=26.3
Q ss_pred cEEEEEcCChhHHHHHHHHHHc-----CCCCeEEE-EeCCH
Q 011654 2 VKICCIGAGYVGGPTMAVIALK-----CPKIEVAV-VDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~-----~~G~~V~~-~D~~~ 36 (480)
+||+|||+|.||..++..|.++ +++.+|++ .|+++
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~ 45 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRS 45 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSB
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecCh
Confidence 4799999999999999999763 13556654 56654
No 498
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.61 E-value=0.067 Score=55.36 Aligned_cols=109 Identities=17% Similarity=0.141 Sum_probs=69.8
Q ss_pred CEEEEEeeccCCCCCcccCChHHHHHHHHHhC--CCEEEEECCCCChHHHHHhhhccccCCCCCCCCCCCCC-----CCC
Q 011654 325 KKIAILGFAFKKDTGDTRETPAIDVCKGLLGD--KAKLSIYDPQVTEDQIQRDLSMKKFDWDHPIHLQPMSP-----PAS 397 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~--g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 397 (480)
.+|+|+|+.| ....++..|.+. |.+|.+||......+ .+.... -|+. .+... ...
T Consensus 6 mkI~VIG~G~----------mG~~lA~~La~~g~G~~V~~~d~~~~~~~---~l~~g~----~~i~-e~~l~~~~~~~~~ 67 (467)
T 2q3e_A 6 KKICCIGAGY----------VGGPTCSVIAHMCPEIRVTVVDVNESRIN---AWNSPT----LPIY-EPGLKEVVESCRG 67 (467)
T ss_dssp CEEEEECCST----------THHHHHHHHHHHCTTSEEEEECSCHHHHH---HHTSSS----CSSC-CTTHHHHHHHHBT
T ss_pred cEEEEECCCH----------HHHHHHHHHHhcCCCCEEEEEECCHHHHH---HHhCCC----CCcC-CCCHHHHHHHhhc
Confidence 5899999988 889999999998 899999998643222 111000 0110 00000 001
Q ss_pred CceeeecCHHHhcccccEEEEEecccc-cc------ccc-------HHHHHHhcCCCCEEEEcCCCCC
Q 011654 398 KQVNVVWDAYQAAKDAHGVCILTEWDE-FK------TLD-------YQKIFDNMRKPAYIFDGRNILD 451 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~h~~-~~------~~~-------~~~~~~~~~~~~~i~D~~~~~~ 451 (480)
.++..++++.++++++|+|++++..+. .+ ..| .+.+...+++..+|+|...+..
T Consensus 68 ~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~ 135 (467)
T 2q3e_A 68 KNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPV 135 (467)
T ss_dssp TTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCT
T ss_pred CCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCc
Confidence 246777888999999999999986544 11 122 2356666777678999876554
No 499
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.60 E-value=0.023 Score=55.88 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=31.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHH---cCCCCeEEEEeCCH
Q 011654 1 MVKICCIGAGYVGGPTMAVIAL---KCPKIEVAVVDISV 36 (480)
Q Consensus 1 imkI~VIGlG~~G~~lA~~La~---~~~G~~V~~~D~~~ 36 (480)
|++|.|||.|..|+.+|..|++ . |++|+++|+++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCC
Confidence 6789999999999999999998 7 99999999854
No 500
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.57 E-value=0.015 Score=58.29 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=31.9
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 011654 1 MVKICCIGA-GYVGGPTMAVIALKCPKIEVAVVDISVS 37 (480)
Q Consensus 1 imkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~ 37 (480)
||+|.|.|+ |.+|..++..|++. |++|++++++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~ 64 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKN 64 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCc
Confidence 579999997 99999999999998 999999999754
Done!