Query 011657
Match_columns 480
No_of_seqs 492 out of 1885
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 03:47:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011657.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011657hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 2.5E-41 5.5E-46 312.8 36.5 413 48-474 7-472 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 1.7E-38 3.8E-43 313.3 35.4 391 48-463 163-740 (742)
3 KOG0254 Predicted transporter 100.0 2.3E-37 4.9E-42 301.7 38.6 412 49-474 42-501 (513)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.5E-37 3.3E-42 303.1 34.6 397 52-468 16-500 (502)
5 PRK10077 xylE D-xylose transpo 100.0 2E-36 4.4E-41 295.2 37.3 406 51-475 11-476 (479)
6 TIGR00879 SP MFS transporter, 100.0 6E-36 1.3E-40 292.6 38.0 405 50-464 26-478 (481)
7 TIGR00898 2A0119 cation transp 100.0 4.1E-34 8.9E-39 280.5 33.5 360 73-464 110-502 (505)
8 KOG0253 Synaptic vesicle trans 100.0 3E-34 6.5E-39 247.0 26.2 385 55-464 81-527 (528)
9 COG2814 AraJ Arabinose efflux 100.0 1E-33 2.3E-38 254.3 30.1 339 53-457 14-387 (394)
10 PRK10642 proline/glycine betai 100.0 2.3E-33 5.1E-38 272.6 31.7 360 55-462 19-435 (490)
11 COG2271 UhpC Sugar phosphate p 100.0 4.5E-33 9.8E-38 246.2 23.6 361 51-456 28-434 (448)
12 PRK11551 putative 3-hydroxyphe 100.0 1.6E-32 3.6E-37 261.8 28.9 346 50-454 13-394 (406)
13 PRK11663 regulatory protein Uh 100.0 1.1E-32 2.5E-37 264.0 26.4 359 56-461 27-429 (434)
14 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.1E-32 1.3E-36 256.8 31.1 358 53-445 9-410 (412)
15 PRK12307 putative sialic acid 100.0 4.2E-32 9.2E-37 260.7 30.2 357 55-458 21-411 (426)
16 PRK09556 uhpT sugar phosphate 100.0 1.2E-32 2.5E-37 266.5 26.3 364 50-454 27-447 (467)
17 PF00083 Sugar_tr: Sugar (and 100.0 2.5E-39 5.5E-44 313.0 -21.0 397 58-470 6-450 (451)
18 KOG0252 Inorganic phosphate tr 100.0 1E-32 2.2E-37 245.1 21.4 409 42-471 32-512 (538)
19 PRK03545 putative arabinose tr 100.0 1.5E-31 3.2E-36 253.4 30.2 329 59-456 16-380 (390)
20 PRK09705 cynX putative cyanate 100.0 1.8E-31 3.9E-36 252.3 30.5 345 51-464 9-389 (393)
21 PRK10406 alpha-ketoglutarate t 100.0 5.8E-31 1.3E-35 252.2 30.3 345 53-454 23-422 (432)
22 TIGR00891 2A0112 putative sial 100.0 1.3E-30 2.9E-35 249.0 30.3 349 54-440 14-400 (405)
23 PRK03893 putative sialic acid 100.0 1.9E-30 4.2E-35 254.2 29.7 369 53-444 21-441 (496)
24 PRK14995 methyl viologen resis 100.0 3.1E-30 6.8E-35 250.9 30.6 359 51-431 5-413 (495)
25 PRK11273 glpT sn-glycerol-3-ph 100.0 2.2E-30 4.7E-35 249.6 29.0 357 57-456 34-435 (452)
26 TIGR00890 2A0111 Oxalate/Forma 100.0 8.9E-31 1.9E-35 247.7 25.4 324 68-449 19-375 (377)
27 PRK09952 shikimate transporter 100.0 1.1E-29 2.4E-34 243.3 31.8 349 54-454 24-431 (438)
28 TIGR00903 2A0129 major facilit 100.0 1.4E-30 3E-35 242.2 24.3 316 70-453 9-362 (368)
29 PRK15075 citrate-proton sympor 100.0 6.6E-30 1.4E-34 245.1 29.1 325 53-435 16-398 (434)
30 PRK10091 MFS transport protein 100.0 8.4E-30 1.8E-34 240.4 27.6 332 58-456 9-376 (382)
31 PLN00028 nitrate transmembrane 100.0 1.3E-29 2.8E-34 245.0 28.5 335 64-455 48-432 (476)
32 TIGR00893 2A0114 d-galactonate 100.0 8.1E-30 1.7E-34 243.0 26.8 354 62-453 4-396 (399)
33 PRK05122 major facilitator sup 100.0 2.5E-29 5.4E-34 239.2 27.8 323 60-455 23-388 (399)
34 PRK10504 putative transporter; 100.0 2E-28 4.3E-33 238.2 32.6 355 58-435 16-419 (471)
35 TIGR00892 2A0113 monocarboxyla 100.0 1.5E-29 3.1E-34 243.3 24.3 342 68-451 35-416 (455)
36 PRK15402 multidrug efflux syst 100.0 4.4E-29 9.6E-34 237.9 27.3 343 48-448 9-387 (406)
37 PRK10213 nepI ribonucleoside t 100.0 2.4E-28 5.1E-33 230.8 31.3 313 70-451 38-386 (394)
38 KOG0255 Synaptic vesicle trans 100.0 2.8E-28 6.1E-33 239.5 32.9 362 89-472 113-508 (521)
39 PRK03699 putative transporter; 100.0 2.4E-29 5.1E-34 238.4 24.2 329 58-452 13-376 (394)
40 PRK10489 enterobactin exporter 100.0 1.2E-29 2.6E-34 242.5 22.1 343 67-471 32-414 (417)
41 PRK03633 putative MFS family t 100.0 6.6E-28 1.4E-32 227.6 31.4 327 58-454 12-370 (381)
42 TIGR00712 glpT glycerol-3-phos 100.0 6.7E-29 1.5E-33 238.4 24.1 367 55-460 30-437 (438)
43 PRK12382 putative transporter; 100.0 6E-28 1.3E-32 229.1 30.0 316 67-455 30-388 (392)
44 TIGR00894 2A0114euk Na(+)-depe 100.0 7.2E-28 1.6E-32 233.6 30.5 365 53-454 20-448 (465)
45 TIGR00895 2A0115 benzoate tran 100.0 5.2E-28 1.1E-32 230.6 27.5 341 57-428 22-397 (398)
46 PRK15034 nitrate/nitrite trans 100.0 2.4E-27 5.2E-32 221.4 31.0 327 67-457 49-455 (462)
47 TIGR00711 efflux_EmrB drug res 100.0 8.9E-28 1.9E-32 234.9 27.8 357 55-432 5-411 (485)
48 PRK09874 drug efflux system pr 100.0 5E-28 1.1E-32 231.3 24.8 332 60-454 22-396 (408)
49 PRK11043 putative transporter; 100.0 1.9E-27 4E-32 226.4 27.9 308 66-435 20-361 (401)
50 TIGR00881 2A0104 phosphoglycer 100.0 1.6E-28 3.5E-33 232.5 20.4 338 61-437 4-378 (379)
51 TIGR00899 2A0120 sugar efflux 100.0 2.5E-27 5.5E-32 223.9 28.3 327 61-454 6-372 (375)
52 PRK15403 multidrug efflux syst 100.0 2.9E-27 6.4E-32 224.6 27.5 342 51-451 15-392 (413)
53 PRK10133 L-fucose transporter; 100.0 3.8E-27 8.2E-32 224.9 27.7 335 53-451 27-428 (438)
54 TIGR00900 2A0121 H+ Antiporter 100.0 2.7E-27 5.9E-32 222.9 23.6 315 62-433 9-365 (365)
55 TIGR00710 efflux_Bcr_CflA drug 100.0 6.5E-27 1.4E-31 221.9 25.4 310 62-430 15-360 (385)
56 KOG2532 Permease of the major 100.0 9.4E-26 2E-30 212.4 31.4 330 88-456 67-447 (466)
57 KOG1330 Sugar transporter/spin 100.0 7.5E-28 1.6E-32 215.4 15.6 336 45-432 26-413 (493)
58 TIGR00897 2A0118 polyol permea 100.0 3.2E-26 7E-31 217.5 27.5 316 89-454 43-399 (402)
59 TIGR00889 2A0110 nucleoside tr 100.0 3.1E-26 6.7E-31 217.6 27.1 333 72-462 23-408 (418)
60 cd06174 MFS The Major Facilita 100.0 4.7E-26 1E-30 213.3 27.4 310 58-454 5-350 (352)
61 TIGR00883 2A0106 metabolite-pr 100.0 2.3E-26 5.1E-31 218.9 25.3 330 63-446 4-391 (394)
62 KOG2533 Permease of the major 100.0 1E-26 2.2E-31 219.2 21.5 357 41-441 34-441 (495)
63 COG2223 NarK Nitrate/nitrite t 100.0 7.8E-26 1.7E-30 201.0 25.3 329 69-457 31-402 (417)
64 TIGR00885 fucP L-fucose:H+ sym 100.0 1.1E-25 2.4E-30 212.9 27.8 327 55-447 6-403 (410)
65 PRK10473 multidrug efflux syst 99.9 8.3E-26 1.8E-30 214.4 25.6 310 67-445 18-363 (392)
66 TIGR00902 2A0127 phenyl propri 99.9 1.7E-25 3.8E-30 210.9 27.5 328 59-452 11-375 (382)
67 PRK11652 emrD multidrug resist 99.9 3.3E-25 7.1E-30 210.5 28.9 303 66-431 22-360 (394)
68 PF07690 MFS_1: Major Facilita 99.9 1.5E-26 3.3E-31 216.6 18.7 310 60-422 4-352 (352)
69 PRK09528 lacY galactoside perm 99.9 5.8E-26 1.3E-30 217.3 22.6 319 89-458 41-405 (420)
70 PRK11010 ampG muropeptide tran 99.9 1.6E-25 3.4E-30 216.9 25.7 337 62-455 22-402 (491)
71 PF06609 TRI12: Fungal trichot 99.9 9.5E-25 2E-29 208.1 28.8 365 41-429 33-465 (599)
72 PRK11195 lysophospholipid tran 99.9 1E-25 2.3E-30 212.7 21.9 311 89-455 33-379 (393)
73 PRK11646 multidrug resistance 99.9 1.2E-24 2.5E-29 206.1 28.8 303 89-451 41-383 (400)
74 PRK11102 bicyclomycin/multidru 99.9 6.2E-25 1.3E-29 207.6 26.7 299 68-424 7-342 (377)
75 PRK10054 putative transporter; 99.9 1.4E-25 2.9E-30 212.1 21.9 321 67-453 22-381 (395)
76 PRK15011 sugar efflux transpor 99.9 1.1E-24 2.5E-29 206.2 27.5 320 65-454 28-389 (393)
77 TIGR00896 CynX cyanate transpo 99.9 1.8E-24 4E-29 202.4 28.1 299 69-434 17-351 (355)
78 PRK11128 putative 3-phenylprop 99.9 2.1E-24 4.6E-29 203.7 27.9 321 65-451 17-374 (382)
79 KOG2504 Monocarboxylate transp 99.9 4.5E-25 9.7E-30 210.5 21.4 390 42-454 40-474 (509)
80 TIGR00882 2A0105 oligosacchari 99.9 2.2E-24 4.8E-29 204.8 25.3 328 68-452 18-391 (396)
81 TIGR00886 2A0108 nitrite extru 99.9 5.3E-24 1.1E-28 200.5 22.7 306 63-417 12-365 (366)
82 COG0738 FucP Fucose permease [ 99.9 2.7E-23 5.9E-28 183.5 22.9 331 55-451 16-404 (422)
83 PRK11902 ampG muropeptide tran 99.9 1.2E-22 2.6E-27 193.2 25.7 334 61-454 8-388 (402)
84 PF05977 MFS_3: Transmembrane 99.9 3.6E-22 7.9E-27 191.6 28.5 344 43-453 8-391 (524)
85 KOG3764 Vesicular amine transp 99.9 7.1E-24 1.5E-28 185.8 10.3 313 89-454 101-452 (464)
86 PRK06814 acylglycerophosphoeth 99.9 2.7E-22 5.8E-27 215.4 24.7 309 93-447 51-413 (1140)
87 COG2807 CynX Cyanate permease 99.9 6.8E-21 1.5E-25 165.8 27.8 331 58-455 18-384 (395)
88 PRK08633 2-acyl-glycerophospho 99.9 6.7E-22 1.4E-26 213.2 25.2 307 92-447 45-401 (1146)
89 TIGR00792 gph sugar (Glycoside 99.9 1.1E-21 2.3E-26 189.3 22.5 295 89-435 30-384 (437)
90 TIGR02718 sider_RhtX_FptX side 99.9 6.3E-21 1.4E-25 180.8 26.9 338 56-452 5-387 (390)
91 PRK10207 dipeptide/tripeptide 99.9 1.5E-21 3.3E-26 188.0 22.8 351 89-454 45-474 (489)
92 PF03825 Nuc_H_symport: Nucleo 99.9 3.2E-20 6.9E-25 173.2 28.3 332 69-458 19-397 (400)
93 PTZ00207 hypothetical protein; 99.9 6.2E-20 1.3E-24 176.7 26.3 392 44-460 24-556 (591)
94 KOG2615 Permease of the major 99.9 9.4E-21 2E-25 165.3 18.5 323 90-448 64-432 (451)
95 TIGR00901 2A0125 AmpG-related 99.9 1.6E-20 3.5E-25 175.9 21.6 294 68-415 4-355 (356)
96 TIGR00924 yjdL_sub1_fam amino 99.9 1.2E-19 2.6E-24 175.0 26.8 379 62-454 20-466 (475)
97 TIGR00805 oat sodium-independe 99.9 4.7E-21 1E-25 189.7 16.6 341 58-431 39-581 (633)
98 KOG4686 Predicted sugar transp 99.8 4.7E-20 1E-24 154.1 13.3 354 51-455 43-442 (459)
99 TIGR00806 rfc RFC reduced fola 99.8 6E-19 1.3E-23 161.9 21.8 356 68-451 42-443 (511)
100 PRK09584 tppB putative tripept 99.8 4.6E-19 1E-23 171.9 22.2 351 89-454 52-477 (500)
101 TIGR00788 fbt folate/biopterin 99.8 1.7E-19 3.8E-24 173.4 18.3 336 58-433 32-415 (468)
102 PRK10429 melibiose:sodium symp 99.8 2.9E-18 6.4E-23 166.1 20.4 300 89-434 37-396 (473)
103 PF01306 LacY_symp: LacY proto 99.8 8.9E-19 1.9E-23 160.1 15.6 321 89-461 38-405 (412)
104 PRK09669 putative symporter Ya 99.8 1.7E-17 3.7E-22 159.9 21.8 293 89-435 40-392 (444)
105 TIGR01301 GPH_sucrose GPH fami 99.8 8.9E-17 1.9E-21 151.9 25.5 337 89-461 34-476 (477)
106 PRK09848 glucuronide transport 99.8 3.1E-17 6.7E-22 158.3 21.9 165 262-434 220-391 (448)
107 KOG2563 Permease of the major 99.8 2.5E-16 5.4E-21 141.5 23.9 363 49-465 42-459 (480)
108 PF13347 MFS_2: MFS/sugar tran 99.7 2.1E-16 4.6E-21 151.5 21.4 295 89-435 32-388 (428)
109 PRK11462 putative transporter; 99.7 1.5E-15 3.2E-20 146.2 25.6 291 89-434 40-390 (460)
110 PF11700 ATG22: Vacuole efflux 99.7 7.2E-15 1.6E-19 140.0 28.5 177 282-461 289-472 (477)
111 COG2211 MelB Na+/melibiose sym 99.7 1.2E-14 2.5E-19 134.5 25.2 297 89-435 43-400 (467)
112 PRK15462 dipeptide/tripeptide 99.7 1.3E-14 2.9E-19 137.8 24.9 323 89-428 40-437 (493)
113 TIGR01272 gluP glucose/galacto 99.7 1.5E-14 3.3E-19 131.5 21.9 145 290-444 156-303 (310)
114 COG2270 Permeases of the major 99.7 6.3E-14 1.4E-18 125.6 23.3 314 92-454 56-427 (438)
115 COG3104 PTR2 Dipeptide/tripept 99.7 1.6E-13 3.4E-18 125.9 26.2 360 89-456 56-487 (498)
116 KOG2325 Predicted transporter/ 99.6 2.6E-15 5.6E-20 139.1 10.2 361 41-451 27-470 (488)
117 PRK11663 regulatory protein Uh 99.6 6.1E-14 1.3E-18 134.8 16.2 172 280-458 29-200 (434)
118 TIGR02332 HpaX 4-hydroxyphenyl 99.6 1E-13 2.3E-18 132.0 16.7 181 273-460 7-193 (412)
119 COG2814 AraJ Arabinose efflux 99.6 8.6E-14 1.9E-18 126.2 14.2 174 277-457 16-189 (394)
120 TIGR00710 efflux_Bcr_CflA drug 99.5 1.6E-13 3.5E-18 130.2 14.2 165 290-461 21-185 (385)
121 PRK10054 putative transporter; 99.5 1.9E-13 4.2E-18 129.4 14.6 161 290-458 23-184 (395)
122 TIGR00895 2A0115 benzoate tran 99.5 1.3E-13 2.8E-18 131.5 13.4 164 289-459 32-195 (398)
123 PRK10213 nepI ribonucleoside t 99.5 2.6E-13 5.7E-18 128.5 15.2 159 294-459 40-198 (394)
124 PRK03545 putative arabinose tr 99.5 2.3E-13 4.9E-18 129.2 14.7 159 293-458 28-186 (390)
125 PRK14995 methyl viologen resis 99.5 4.6E-13 1E-17 130.8 16.1 179 274-459 6-185 (495)
126 TIGR00711 efflux_EmrB drug res 99.5 2.7E-13 5.9E-18 132.8 14.3 171 282-459 10-180 (485)
127 TIGR00893 2A0114 d-galactonate 99.5 2.5E-13 5.5E-18 129.3 13.7 162 291-459 11-172 (399)
128 TIGR01299 synapt_SV2 synaptic 99.5 4E-13 8.6E-18 134.1 15.3 181 271-459 164-357 (742)
129 TIGR00891 2A0112 putative sial 99.5 7.3E-13 1.6E-17 126.6 16.4 180 273-460 11-192 (405)
130 KOG3626 Organic anion transpor 99.5 1.9E-12 4E-17 125.4 18.6 344 52-431 97-649 (735)
131 PRK11551 putative 3-hydroxyphe 99.5 5.1E-13 1.1E-17 127.6 14.7 163 290-459 31-193 (406)
132 COG2271 UhpC Sugar phosphate p 99.5 2.1E-13 4.6E-18 122.1 10.8 179 274-459 29-209 (448)
133 PF07690 MFS_1: Major Facilita 99.5 3.8E-13 8.1E-18 126.0 13.0 153 292-451 14-167 (352)
134 PRK10473 multidrug efflux syst 99.5 6.2E-13 1.3E-17 126.3 14.6 169 285-460 14-182 (392)
135 TIGR00881 2A0104 phosphoglycer 99.5 2.4E-13 5.3E-18 128.6 11.0 162 291-459 12-174 (379)
136 PRK10504 putative transporter; 99.5 1.2E-12 2.5E-17 127.7 15.8 168 284-458 20-187 (471)
137 PRK03699 putative transporter; 99.5 2.6E-12 5.7E-17 122.0 17.2 156 290-452 23-179 (394)
138 PRK10091 MFS transport protein 99.5 9.1E-13 2E-17 124.5 13.8 161 292-459 21-181 (382)
139 PRK15403 multidrug efflux syst 99.5 1.3E-12 2.8E-17 124.5 14.7 162 292-460 34-195 (413)
140 PRK15402 multidrug efflux syst 99.5 2E-12 4.3E-17 123.5 16.0 179 275-460 14-192 (406)
141 TIGR00900 2A0121 H+ Antiporter 99.5 1.8E-12 3.9E-17 122.0 15.5 161 291-453 16-176 (365)
142 TIGR00712 glpT glycerol-3-phos 99.5 1.1E-12 2.3E-17 126.4 14.1 164 292-459 45-209 (438)
143 PLN00028 nitrate transmembrane 99.4 2.9E-12 6.3E-17 124.3 16.7 158 291-456 53-219 (476)
144 PRK10489 enterobactin exporter 99.4 2.4E-12 5.1E-17 123.4 15.8 186 263-454 10-195 (417)
145 KOG1330 Sugar transporter/spin 99.4 2E-13 4.3E-18 123.5 7.7 181 276-463 35-216 (493)
146 PRK11273 glpT sn-glycerol-3-ph 99.4 2.6E-12 5.7E-17 124.2 16.1 163 293-459 48-211 (452)
147 PRK15462 dipeptide/tripeptide 99.4 1.6E-12 3.5E-17 123.8 14.0 157 290-452 25-185 (493)
148 PRK12307 putative sialic acid 99.4 2.4E-12 5.2E-17 123.8 15.6 158 281-445 25-182 (426)
149 PRK11652 emrD multidrug resist 99.4 2.7E-12 5.8E-17 122.1 15.1 162 292-460 26-187 (394)
150 KOG3762 Predicted transporter 99.4 3.4E-12 7.3E-17 117.4 14.6 155 292-453 389-544 (618)
151 PRK11646 multidrug resistance 99.4 3.3E-12 7.1E-17 121.3 15.3 157 294-458 30-187 (400)
152 TIGR00903 2A0129 major facilit 99.4 1.9E-12 4.2E-17 120.7 12.8 162 291-460 8-169 (368)
153 TIGR00924 yjdL_sub1_fam amino 99.4 3.2E-12 6.9E-17 123.7 14.5 157 288-451 24-187 (475)
154 PF03137 OATP: Organic Anion T 99.4 1.9E-14 4.1E-19 139.2 -1.6 348 57-431 8-514 (539)
155 TIGR00892 2A0113 monocarboxyla 99.4 4.6E-12 1E-16 122.3 14.5 159 291-456 36-194 (455)
156 PRK11102 bicyclomycin/multidru 99.4 2.5E-12 5.5E-17 121.6 12.2 161 292-459 9-169 (377)
157 PRK09874 drug efflux system pr 99.4 8.9E-12 1.9E-16 119.2 16.1 160 291-458 31-195 (408)
158 PRK03893 putative sialic acid 99.4 7.5E-12 1.6E-16 123.0 15.8 163 278-447 24-186 (496)
159 TIGR00897 2A0118 polyol permea 99.4 9.3E-12 2E-16 118.5 15.6 149 292-443 31-180 (402)
160 TIGR00886 2A0108 nitrite extru 99.4 1E-11 2.2E-16 116.9 15.5 155 289-450 16-182 (366)
161 PRK10207 dipeptide/tripeptide 99.4 8.5E-12 1.8E-16 120.7 15.1 153 291-449 31-187 (489)
162 PRK11043 putative transporter; 99.4 1E-11 2.2E-16 118.4 15.2 155 296-457 28-182 (401)
163 PRK15034 nitrate/nitrite trans 99.4 3E-11 6.5E-16 113.9 17.4 175 281-458 41-234 (462)
164 PRK09556 uhpT sugar phosphate 99.4 4.4E-12 9.6E-17 123.1 11.7 179 275-455 30-211 (467)
165 TIGR00890 2A0111 Oxalate/Forma 99.4 2.6E-12 5.6E-17 121.5 9.4 159 291-457 20-178 (377)
166 PRK05122 major facilitator sup 99.3 3E-11 6.5E-16 115.1 15.9 161 290-451 31-194 (399)
167 TIGR00894 2A0114euk Na(+)-depe 99.3 4.6E-12 9.9E-17 123.2 10.2 151 303-458 70-221 (465)
168 PRK09584 tppB putative tripept 99.3 2.7E-11 5.8E-16 118.0 14.5 154 290-449 37-194 (500)
169 PRK12382 putative transporter; 99.3 3.9E-11 8.5E-16 114.0 14.8 155 292-447 33-190 (392)
170 PRK09705 cynX putative cyanate 99.3 3.6E-11 7.8E-16 114.0 14.3 151 291-449 26-177 (393)
171 PRK11195 lysophospholipid tran 99.3 6.5E-11 1.4E-15 112.1 15.3 154 294-459 23-176 (393)
172 COG2223 NarK Nitrate/nitrite t 99.3 4.5E-11 9.7E-16 107.5 13.1 167 286-458 26-195 (417)
173 PRK10077 xylE D-xylose transpo 99.3 8.2E-11 1.8E-15 115.1 16.3 154 305-460 51-218 (479)
174 cd06174 MFS The Major Facilita 99.3 4.5E-11 9.9E-16 111.8 13.8 157 289-452 14-170 (352)
175 PF05631 DUF791: Protein of un 99.3 8E-10 1.7E-14 98.3 20.6 74 89-163 64-137 (354)
176 PF05977 MFS_3: Transmembrane 99.3 7.3E-11 1.6E-15 114.0 15.1 186 265-456 5-190 (524)
177 TIGR00879 SP MFS transporter, 99.3 2.9E-11 6.3E-16 118.3 12.6 147 309-459 70-219 (481)
178 TIGR00899 2A0120 sugar efflux 99.3 5.4E-11 1.2E-15 112.4 13.9 161 292-459 15-179 (375)
179 PRK03633 putative MFS family t 99.3 1.3E-10 2.8E-15 109.9 16.2 138 288-432 20-157 (381)
180 TIGR00885 fucP L-fucose:H+ sym 99.3 1.1E-10 2.3E-15 111.0 15.3 158 291-452 20-203 (410)
181 PRK10642 proline/glycine betai 99.3 2.1E-10 4.5E-15 112.1 17.6 172 281-459 23-215 (490)
182 TIGR00887 2A0109 phosphate:H+ 99.3 2.1E-10 4.5E-15 112.5 17.5 151 308-459 54-227 (502)
183 TIGR00880 2_A_01_02 Multidrug 99.3 1.8E-11 3.9E-16 97.8 8.2 136 317-458 5-140 (141)
184 TIGR00805 oat sodium-independe 99.2 4.3E-11 9.2E-16 119.2 11.3 177 277-454 36-279 (633)
185 PRK10406 alpha-ketoglutarate t 99.2 2.9E-10 6.3E-15 109.3 16.7 172 283-459 31-221 (432)
186 KOG2816 Predicted transporter 99.2 2.6E-10 5.6E-15 107.8 15.6 284 102-431 70-392 (463)
187 PRK09528 lacY galactoside perm 99.2 2.8E-10 6E-15 109.2 15.8 184 266-458 6-193 (420)
188 PF06609 TRI12: Fungal trichot 99.2 2.2E-10 4.8E-15 110.4 14.0 149 294-452 64-213 (599)
189 KOG3764 Vesicular amine transp 99.2 5.1E-11 1.1E-15 105.8 8.8 150 308-463 104-254 (464)
190 PF03092 BT1: BT1 family; Int 99.2 7.4E-11 1.6E-15 112.3 10.1 337 89-460 20-416 (433)
191 PF03209 PUCC: PUCC protein; 99.2 1.2E-08 2.6E-13 92.5 23.4 341 89-452 10-394 (403)
192 PRK15075 citrate-proton sympor 99.2 6.2E-10 1.3E-14 107.1 16.4 162 276-443 17-199 (434)
193 PTZ00207 hypothetical protein; 99.2 3.5E-10 7.5E-15 109.8 13.6 162 291-456 44-205 (591)
194 TIGR00806 rfc RFC reduced fola 99.2 1.4E-09 3E-14 101.0 16.7 137 292-437 44-181 (511)
195 PRK11902 ampG muropeptide tran 99.2 6.4E-10 1.4E-14 106.0 15.2 169 284-459 9-184 (402)
196 PRK15011 sugar efflux transpor 99.2 8.5E-10 1.8E-14 104.7 15.7 160 293-460 34-198 (393)
197 PRK09952 shikimate transporter 99.1 1.7E-09 3.7E-14 104.1 17.0 168 275-448 23-212 (438)
198 TIGR00901 2A0125 AmpG-related 99.1 5E-10 1.1E-14 105.0 12.9 162 292-459 6-181 (356)
199 PRK10133 L-fucose transporter; 99.1 1.4E-09 3E-14 104.4 16.1 136 290-429 42-177 (438)
200 PRK06814 acylglycerophosphoeth 99.1 8.9E-10 1.9E-14 119.2 16.0 188 264-454 5-193 (1140)
201 TIGR01301 GPH_sucrose GPH fami 99.1 2.1E-09 4.5E-14 102.3 15.9 184 274-460 5-222 (477)
202 TIGR00898 2A0119 cation transp 99.1 2.1E-10 4.6E-15 112.9 9.2 153 296-459 111-266 (505)
203 TIGR00896 CynX cyanate transpo 99.1 5.3E-10 1.2E-14 104.7 11.3 148 292-448 18-167 (355)
204 PRK11010 ampG muropeptide tran 99.1 2.1E-09 4.5E-14 104.7 15.7 164 289-459 27-197 (491)
205 TIGR00882 2A0105 oligosacchari 99.1 1.4E-09 3E-14 103.5 14.2 164 291-458 19-185 (396)
206 KOG2615 Permease of the major 99.1 2.1E-10 4.6E-15 101.3 7.5 116 308-430 66-181 (451)
207 PF01770 Folate_carrier: Reduc 99.1 2.3E-08 4.9E-13 91.8 20.3 317 89-423 35-394 (412)
208 PRK11128 putative 3-phenylprop 99.1 3.3E-09 7.1E-14 100.4 14.7 150 291-451 21-174 (382)
209 PRK08633 2-acyl-glycerophospho 99.1 2.9E-09 6.4E-14 115.6 15.7 118 311-431 48-165 (1146)
210 KOG2532 Permease of the major 99.0 1.4E-09 3E-14 103.4 10.9 146 308-457 71-217 (466)
211 TIGR00880 2_A_01_02 Multidrug 99.0 9.6E-10 2.1E-14 87.7 8.5 102 100-202 4-140 (141)
212 TIGR00902 2A0127 phenyl propri 99.0 5.2E-09 1.1E-13 99.0 14.8 152 288-447 18-170 (382)
213 COG3104 PTR2 Dipeptide/tripept 99.0 1.4E-09 2.9E-14 100.5 9.0 149 306-459 58-209 (498)
214 TIGR02718 sider_RhtX_FptX side 98.9 1.4E-08 3.1E-13 96.4 14.1 177 279-458 6-186 (390)
215 KOG2504 Monocarboxylate transp 98.9 5.5E-09 1.2E-13 100.7 11.1 177 273-457 45-222 (509)
216 PF06963 FPN1: Ferroportin1 (F 98.9 1.3E-06 2.7E-11 82.0 26.1 156 261-422 250-409 (432)
217 TIGR00792 gph sugar (Glycoside 98.9 9.4E-09 2E-13 99.3 12.7 163 296-460 22-198 (437)
218 TIGR00883 2A0106 metabolite-pr 98.9 2.4E-08 5.3E-13 94.9 14.9 131 321-451 46-186 (394)
219 PF06813 Nodulin-like: Nodulin 98.9 1.5E-08 3.3E-13 87.3 11.5 142 287-431 15-157 (250)
220 KOG0255 Synaptic vesicle trans 98.9 9.7E-09 2.1E-13 101.4 11.5 143 308-460 116-258 (521)
221 KOG2533 Permease of the major 98.8 3.7E-08 8.1E-13 94.0 12.9 153 302-461 74-232 (495)
222 COG0738 FucP Fucose permease [ 98.8 9.9E-08 2.1E-12 85.8 14.0 159 292-454 31-208 (422)
223 TIGR00889 2A0110 nucleoside tr 98.8 3E-08 6.6E-13 94.7 10.0 112 92-203 249-405 (418)
224 KOG0254 Predicted transporter 98.8 8.5E-08 1.8E-12 94.3 12.9 141 312-460 91-233 (513)
225 KOG3098 Uncharacterized conser 98.7 3.1E-06 6.8E-11 79.2 21.5 321 100-426 56-409 (461)
226 KOG0569 Permease of the major 98.7 2E-07 4.3E-12 88.0 11.8 144 313-460 63-208 (485)
227 KOG2816 Predicted transporter 98.7 6.5E-07 1.4E-11 85.0 15.3 137 320-465 72-208 (463)
228 PF01306 LacY_symp: LacY proto 98.7 6.9E-08 1.5E-12 89.2 8.3 161 291-458 24-190 (412)
229 KOG4332 Predicted sugar transp 98.6 3.4E-07 7.3E-12 77.3 10.8 295 89-410 67-385 (454)
230 PRK10429 melibiose:sodium symp 98.6 4.5E-07 9.8E-12 88.3 13.2 163 292-459 24-204 (473)
231 PF06779 DUF1228: Protein of u 98.6 1.3E-07 2.8E-12 65.6 6.0 80 65-151 5-84 (85)
232 PRK09669 putative symporter Ya 98.6 2.9E-07 6.3E-12 89.0 10.8 164 294-459 29-207 (444)
233 PF02487 CLN3: CLN3 protein; 98.6 9E-06 2E-10 74.9 18.8 70 94-163 59-128 (402)
234 KOG0252 Inorganic phosphate tr 98.5 6.4E-07 1.4E-11 81.8 10.2 115 308-422 82-197 (538)
235 TIGR00788 fbt folate/biopterin 98.5 8.3E-07 1.8E-11 85.9 11.4 160 292-460 43-212 (468)
236 PF05631 DUF791: Protein of un 98.5 6.5E-06 1.4E-10 73.8 15.6 159 296-462 56-222 (354)
237 COG2807 CynX Cyanate permease 98.5 4.4E-06 9.6E-11 74.3 13.7 154 291-453 29-183 (395)
238 PF13347 MFS_2: MFS/sugar tran 98.5 5.6E-07 1.2E-11 86.6 8.5 162 295-458 23-200 (428)
239 KOG2325 Predicted transporter/ 98.4 5.1E-07 1.1E-11 84.7 7.6 155 304-461 66-234 (488)
240 PF00083 Sugar_tr: Sugar (and 98.4 3.9E-09 8.4E-14 102.4 -7.2 145 311-459 47-194 (451)
241 PF03825 Nuc_H_symport: Nucleo 98.4 3E-06 6.5E-11 79.7 11.7 152 290-450 18-174 (400)
242 TIGR01272 gluP glucose/galacto 98.4 9.4E-06 2E-10 74.1 14.2 74 89-163 173-246 (310)
243 TIGR00926 2A1704 Peptide:H+ sy 98.4 0.00028 6E-09 70.6 25.1 110 89-198 18-179 (654)
244 PRK11462 putative transporter; 98.3 8.1E-06 1.8E-10 79.0 13.5 166 292-459 27-207 (460)
245 PF11700 ATG22: Vacuole efflux 98.3 8.6E-06 1.9E-10 78.3 12.6 115 89-203 312-470 (477)
246 TIGR00926 2A1704 Peptide:H+ sy 98.2 3.3E-05 7.2E-10 77.0 15.1 158 296-454 10-180 (654)
247 KOG0253 Synaptic vesicle trans 98.2 1.3E-05 2.9E-10 71.3 9.5 177 273-459 77-253 (528)
248 PRK09848 glucuronide transport 98.1 3.8E-05 8.2E-10 74.5 13.3 57 296-353 30-92 (448)
249 TIGR00939 2a57 Equilibrative N 98.1 0.00028 6E-09 67.2 18.1 112 311-424 308-427 (437)
250 COG2270 Permeases of the major 98.1 2.4E-05 5.2E-10 71.3 9.4 115 89-203 283-431 (438)
251 COG2211 MelB Na+/melibiose sym 98.1 5.1E-05 1.1E-09 71.3 11.9 167 292-460 30-211 (467)
252 PF12832 MFS_1_like: MFS_1 lik 98.1 1.1E-05 2.3E-10 55.7 5.6 60 68-134 16-75 (77)
253 KOG2563 Permease of the major 98.0 7.7E-05 1.7E-09 68.6 12.3 123 308-431 77-202 (480)
254 PF12832 MFS_1_like: MFS_1 lik 98.0 4.1E-05 9E-10 52.8 8.0 63 285-348 11-73 (77)
255 PF03209 PUCC: PUCC protein; 97.9 5.4E-05 1.2E-09 69.2 9.1 132 302-436 8-156 (403)
256 KOG3574 Acetyl-CoA transporter 97.9 0.0015 3.2E-08 58.8 16.8 44 389-432 389-432 (510)
257 KOG0637 Sucrose transporter an 97.8 5.3E-05 1.2E-09 69.6 7.6 59 89-147 62-125 (498)
258 TIGR00769 AAA ADP/ATP carrier 97.8 0.035 7.6E-07 53.3 26.2 53 92-144 41-94 (472)
259 PF06813 Nodulin-like: Nodulin 97.8 0.0013 2.9E-08 57.0 14.9 85 71-163 21-112 (250)
260 KOG3810 Micronutrient transpor 97.7 0.0014 3E-08 58.2 13.4 335 89-454 36-419 (433)
261 KOG1237 H+/oligopeptide sympor 97.7 0.011 2.3E-07 58.3 21.1 66 71-143 57-123 (571)
262 PF05978 UNC-93: Ion channel r 97.6 0.0015 3.2E-08 52.1 12.1 110 310-426 37-146 (156)
263 TIGR00769 AAA ADP/ATP carrier 97.6 0.0016 3.4E-08 62.3 14.4 121 310-430 43-190 (472)
264 PF03137 OATP: Organic Anion T 97.6 1.1E-05 2.3E-10 78.9 -1.3 176 281-457 10-251 (539)
265 KOG1479 Nucleoside transporter 97.5 0.037 8.1E-07 51.1 20.5 47 376-422 350-396 (406)
266 COG0477 ProP Permeases of the 97.5 0.00037 8E-09 63.6 8.0 104 66-176 16-123 (338)
267 PF03092 BT1: BT1 family; Int 97.5 0.00068 1.5E-08 65.0 9.8 156 298-458 14-177 (433)
268 KOG3626 Organic anion transpor 97.5 0.001 2.2E-08 65.9 10.8 185 274-459 97-346 (735)
269 PF06779 DUF1228: Protein of u 97.1 0.0044 9.5E-08 43.2 7.3 67 292-359 10-76 (85)
270 KOG4686 Predicted sugar transp 97.0 0.0027 5.9E-08 54.8 7.5 48 89-136 295-342 (459)
271 COG0477 ProP Permeases of the 97.0 0.018 4E-07 52.2 13.7 149 292-445 20-174 (338)
272 KOG3762 Predicted transporter 96.9 0.0017 3.7E-08 61.4 5.7 111 89-200 401-546 (618)
273 PF13000 Acatn: Acetyl-coenzym 96.8 0.087 1.9E-06 49.9 15.4 42 389-430 425-466 (544)
274 PF01770 Folate_carrier: Reduc 96.7 0.042 9.2E-07 51.2 13.4 153 294-454 24-180 (412)
275 PF00854 PTR2: POT family; In 96.6 0.015 3.3E-07 54.8 9.6 115 341-456 2-123 (372)
276 PF06963 FPN1: Ferroportin1 (F 96.5 0.086 1.9E-06 50.0 14.2 160 292-453 20-197 (432)
277 KOG3880 Predicted small molecu 96.3 0.014 3E-07 51.2 6.6 68 96-163 64-131 (409)
278 PF03219 TLC: TLC ATP/ADP tran 96.1 0.089 1.9E-06 50.8 12.1 109 322-430 71-205 (491)
279 PF07672 MFS_Mycoplasma: Mycop 95.9 0.14 3.1E-06 44.1 11.1 24 177-200 38-61 (267)
280 KOG1237 H+/oligopeptide sympor 95.9 0.24 5.2E-06 49.1 14.0 160 293-453 57-242 (571)
281 PRK03612 spermidine synthase; 95.9 0.094 2E-06 51.5 11.1 142 304-449 45-190 (521)
282 PF05978 UNC-93: Ion channel r 95.8 0.42 9.1E-06 38.3 12.6 82 92-174 35-116 (156)
283 PF01733 Nucleoside_tran: Nucl 95.7 0.0024 5.2E-08 58.2 -0.6 109 314-424 186-303 (309)
284 KOG0637 Sucrose transporter an 95.1 0.015 3.3E-07 54.0 2.7 151 273-426 32-200 (498)
285 KOG4332 Predicted sugar transp 94.8 0.033 7.3E-07 47.9 3.7 156 299-462 62-226 (454)
286 PF00854 PTR2: POT family; In 94.8 1.9 4.1E-05 40.6 15.9 75 125-199 2-121 (372)
287 KOG3098 Uncharacterized conser 94.7 1.2 2.6E-05 42.6 14.0 107 312-425 52-158 (461)
288 PRK03612 spermidine synthase; 93.9 2.1 4.5E-05 42.3 14.4 36 89-124 45-80 (521)
289 COG3202 ATP/ADP translocase [E 93.8 6.4 0.00014 37.7 23.2 53 92-144 59-112 (509)
290 PF03219 TLC: TLC ATP/ADP tran 93.8 7.2 0.00016 38.0 27.6 52 92-143 56-108 (491)
291 COG3202 ATP/ADP translocase [E 93.4 2 4.3E-05 41.0 12.6 123 309-431 60-210 (509)
292 PF02487 CLN3: CLN3 protein; 92.9 0.82 1.8E-05 42.9 9.3 132 313-456 62-195 (402)
293 KOG1479 Nucleoside transporter 92.2 4.2 9E-05 38.1 12.8 52 283-336 27-78 (406)
294 KOG2601 Iron transporter [Inor 92.0 0.47 1E-05 43.3 6.2 32 392-423 409-440 (503)
295 KOG3574 Acetyl-CoA transporter 91.5 2.5 5.5E-05 39.0 10.2 147 275-426 33-190 (510)
296 KOG3097 Predicted membrane pro 89.1 17 0.00037 33.0 16.3 68 105-173 69-136 (390)
297 PF13000 Acatn: Acetyl-coenzym 88.2 3.5 7.7E-05 39.6 8.9 34 392-425 141-174 (544)
298 PF07857 DUF1632: CEO family ( 83.8 29 0.00063 30.4 12.4 18 125-142 56-73 (254)
299 TIGR00939 2a57 Equilibrative N 83.7 12 0.00025 36.2 10.3 22 318-339 53-74 (437)
300 KOG2881 Predicted membrane pro 83.6 29 0.00062 30.1 16.1 34 320-353 250-283 (294)
301 COG5336 Uncharacterized protei 82.0 5.4 0.00012 28.9 5.4 41 95-135 43-84 (116)
302 KOG2601 Iron transporter [Inor 81.3 9.3 0.0002 35.3 7.9 47 401-447 171-217 (503)
303 PF02990 EMP70: Endomembrane p 76.5 56 0.0012 32.5 12.6 71 262-337 250-320 (521)
304 COG5336 Uncharacterized protei 73.4 4.1 9E-05 29.5 2.8 37 399-435 36-72 (116)
305 KOG0055 Multidrug/pheromone ex 72.3 1.6E+02 0.0034 32.4 16.7 27 170-196 799-825 (1228)
306 PF11947 DUF3464: Protein of u 69.9 13 0.00027 29.5 5.1 31 389-419 114-144 (153)
307 COG3619 Predicted membrane pro 68.0 79 0.0017 27.2 11.7 110 50-159 10-127 (226)
308 PRK11469 hypothetical protein; 66.9 43 0.00093 27.9 8.0 50 90-139 130-180 (188)
309 COG4262 Predicted spermidine s 65.4 97 0.0021 28.7 10.1 119 308-429 41-163 (508)
310 PF06027 DUF914: Eukaryotic pr 63.3 1E+02 0.0023 28.4 10.4 28 424-451 275-302 (334)
311 PRK10263 DNA translocase FtsK; 59.6 61 0.0013 35.7 9.2 21 318-338 60-80 (1355)
312 COG4262 Predicted spermidine s 54.7 76 0.0016 29.4 7.7 75 89-163 38-121 (508)
313 PTZ00101 rhomboid-1 protease; 49.4 2E+02 0.0042 25.8 10.5 39 104-142 118-157 (278)
314 COG1268 BioY Uncharacterized c 46.1 1.4E+02 0.0031 24.7 7.6 24 100-123 88-111 (184)
315 COG4769 Predicted membrane pro 45.8 24 0.00051 28.1 2.9 50 103-158 82-131 (181)
316 PF04346 EutH: Ethanolamine ut 45.7 2.5E+02 0.0054 26.0 15.2 68 95-163 48-118 (354)
317 PF12670 DUF3792: Protein of u 45.0 1.3E+02 0.0029 22.6 8.7 78 91-168 34-115 (116)
318 PF06912 DUF1275: Protein of u 44.9 1.9E+02 0.0042 24.4 11.3 63 101-163 53-126 (209)
319 PF07672 MFS_Mycoplasma: Mycop 43.8 1.3E+02 0.0027 26.6 7.2 34 95-128 142-176 (267)
320 PRK10263 DNA translocase FtsK; 42.1 5.1E+02 0.011 29.1 12.6 16 161-176 143-158 (1355)
321 PF10785 NADH-u_ox-rdase: NADH 41.5 91 0.002 22.0 5.0 43 105-147 29-78 (86)
322 KOG3810 Micronutrient transpor 40.7 1.1E+02 0.0023 28.5 6.5 93 331-430 63-155 (433)
323 PF02694 UPF0060: Uncharacteri 40.7 57 0.0012 23.9 4.0 52 94-145 54-105 (107)
324 PF14241 DUF4341: Domain of un 39.9 1.1E+02 0.0023 20.0 5.0 27 166-192 31-59 (62)
325 PRK02237 hypothetical protein; 37.8 99 0.0021 22.8 4.8 51 95-145 57-107 (109)
326 TIGR01667 YCCS_YHJK integral m 36.9 3.3E+02 0.0071 28.4 10.2 52 112-163 41-97 (701)
327 cd02434 Nodulin-21_like_3 Nodu 35.8 2.9E+02 0.0062 23.9 11.7 33 323-355 180-212 (225)
328 PF05313 Pox_P21: Poxvirus P21 35.8 2.3E+02 0.005 23.2 6.9 25 398-422 110-134 (189)
329 PF06123 CreD: Inner membrane 35.8 2.5E+02 0.0055 27.0 8.6 32 324-355 305-336 (430)
330 PF02632 BioY: BioY family; I 35.4 1.3E+02 0.0028 23.9 5.7 26 100-125 59-84 (148)
331 TIGR01666 YCCS hypothetical me 35.2 4.1E+02 0.0089 27.7 10.5 51 113-163 42-97 (704)
332 PF02694 UPF0060: Uncharacteri 34.6 1.1E+02 0.0025 22.4 4.7 48 309-356 53-100 (107)
333 PRK11715 inner membrane protei 34.2 2.7E+02 0.0059 26.9 8.5 32 324-355 311-342 (436)
334 COG1575 MenA 1,4-dihydroxy-2-n 34.2 3.6E+02 0.0078 24.5 11.5 65 126-192 123-187 (303)
335 COG1971 Predicted membrane pro 33.2 2.9E+02 0.0062 23.0 8.8 39 102-140 145-183 (190)
336 PRK11588 hypothetical protein; 31.9 5.2E+02 0.011 25.6 15.0 36 115-150 137-174 (506)
337 KOG1278 Endosomal membrane pro 31.7 1.6E+02 0.0035 29.0 6.4 40 298-337 347-386 (628)
338 PF10183 ESSS: ESSS subunit of 31.3 35 0.00075 25.2 1.8 38 426-463 51-88 (105)
339 TIGR02230 ATPase_gene1 F0F1-AT 30.1 2.2E+02 0.0048 20.8 6.8 12 332-343 65-76 (100)
340 PRK02237 hypothetical protein; 29.9 1.8E+02 0.0039 21.6 5.0 47 310-356 56-102 (109)
341 PRK14212 camphor resistance pr 29.8 2.6E+02 0.0057 21.5 7.8 8 392-399 82-89 (128)
342 PF09527 ATPase_gene1: Putativ 29.1 1.5E+02 0.0033 18.6 6.6 36 101-136 7-43 (55)
343 PF01914 MarC: MarC family int 29.1 3.6E+02 0.0077 22.8 7.7 59 393-452 27-86 (203)
344 PF05297 Herpes_LMP1: Herpesvi 27.9 20 0.00043 31.3 0.0 12 449-460 178-189 (381)
345 KOG4112 Signal peptidase subun 27.5 1.5E+02 0.0032 21.2 4.0 41 409-452 27-67 (101)
346 KOG4753 Predicted membrane pro 26.7 1.2E+02 0.0025 22.8 3.7 20 46-65 47-66 (124)
347 TIGR02840 spore_YtaF putative 26.6 4E+02 0.0087 22.6 7.8 47 90-137 153-202 (206)
348 PF05915 DUF872: Eukaryotic pr 26.5 90 0.0019 23.5 3.2 24 42-65 36-59 (115)
349 PF06645 SPC12: Microsomal sig 26.0 96 0.0021 21.3 3.1 32 419-452 21-52 (76)
350 KOG4830 Predicted sugar transp 26.0 1.2E+02 0.0027 26.8 4.3 46 295-341 38-92 (412)
351 TIGR02230 ATPase_gene1 F0F1-AT 25.6 2.7E+02 0.0059 20.4 6.5 34 103-136 51-85 (100)
352 PRK10692 hypothetical protein; 25.4 2.5E+02 0.0053 19.8 5.1 19 123-141 3-21 (92)
353 PF03547 Mem_trans: Membrane t 24.9 1.5E+02 0.0033 27.9 5.4 19 320-338 5-23 (385)
354 KOG3880 Predicted small molecu 24.9 71 0.0015 29.0 2.8 135 312-457 64-200 (409)
355 KOG0056 Heavy metal exporter H 24.8 4.6E+02 0.0099 25.9 8.0 16 148-163 257-272 (790)
356 COG2119 Predicted membrane pro 24.7 4.1E+02 0.0088 22.1 7.1 99 33-143 85-183 (190)
357 PF01405 PsbT: Photosystem II 24.2 1.2E+02 0.0027 16.2 2.5 13 193-205 16-28 (29)
358 KOG2765 Predicted membrane pro 23.3 1.5E+02 0.0033 27.6 4.5 93 98-192 190-292 (416)
359 cd02432 Nodulin-21_like_1 Nodu 22.6 5E+02 0.011 22.3 11.9 37 319-355 170-206 (218)
360 PF07857 DUF1632: CEO family ( 22.3 1.9E+02 0.0042 25.5 4.9 21 402-422 76-96 (254)
361 PF10183 ESSS: ESSS subunit of 22.3 1.1E+02 0.0023 22.7 2.9 28 177-204 57-85 (105)
362 KOG3097 Predicted membrane pro 21.8 1.9E+02 0.004 26.8 4.8 44 91-134 307-350 (390)
363 PF10762 DUF2583: Protein of u 21.5 2.9E+02 0.0064 19.3 4.9 18 123-140 3-20 (89)
364 PF04277 OAD_gamma: Oxaloaceta 20.5 69 0.0015 22.0 1.6 23 432-454 10-32 (79)
365 PRK14219 camphor resistance pr 20.4 4.2E+02 0.009 20.6 7.6 7 392-398 81-87 (132)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-41 Score=312.80 Aligned_cols=413 Identities=29% Similarity=0.497 Sum_probs=335.5
Q ss_pred hhhHHhHHHHhhhhhcccccccccccccccccCC---CCCCCcccc--CCh----hHHHHHHHHHHHHHHHHHHHHHHHH
Q 011657 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESP---TLSGISWYD--LSS----VEIGLITSGSLYGALIGSILAFNIA 118 (480)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~----~~~~~~~s~~~~~~~~~~~~~g~l~ 118 (480)
++.....+..+++.+-+||+.+.+|+..+.+.+- .+.+. ++ .++ ...+.+.+++.+|.++|+++.|.++
T Consensus 7 ~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r--~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la 84 (485)
T KOG0569|consen 7 RRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIER--YGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLA 84 (485)
T ss_pred HHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHh--cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555666677799999999999886665521 11111 23 333 3568889999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHhH------------------------------hH
Q 011657 119 DILGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGL------------------------------GG 165 (480)
Q Consensus 119 dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~g~g~------------------------------~g 165 (480)
||+|||..+.++.++..++.++..+ ++++++++++|++.|+..|. +|
T Consensus 85 ~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g 164 (485)
T KOG0569|consen 85 DRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIG 164 (485)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHH
Confidence 9999999999998888888877666 47899999999999999888 34
Q ss_pred Hhhhhhhh-----hhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHH-hcccccCchhhhHHHHHHHHHHHhCCCCCC
Q 011657 166 YGIGSLLV-----DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL-CAMKRKGDMQDLRESAISCLCRLRGQSIGD 239 (480)
Q Consensus 166 ~~~g~~l~-----~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (480)
..+|..+. .....|++.+.+..+++++..+...++||||||+.. ++ +.++|++.++++++.++++
T Consensus 165 ~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~---------~~~~A~~sl~~y~G~~~~~ 235 (485)
T KOG0569|consen 165 ILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKG---------DEEEARKALKFYRGKEDVE 235 (485)
T ss_pred HHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcC---------CHHHHHHHHHHHhCCCcch
Confidence 44443332 123379999999999999999999999999999987 66 8899999999999988765
Q ss_pred CChhhHHHHHHhhhcccccccccHHHHhhhhh-hhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHH
Q 011657 240 SAPTEVDEILTELSYVGEDKEVSLREVFHGKC-LKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSIL 318 (480)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (480)
...++..++.++.+. ++++..+++++++++. ++...+.+.+....++++.+...+|...++++.|+ +..++.+....
T Consensus 236 ~~~e~~~~e~~~~~~-~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~-~~~~a~~an~~ 313 (485)
T KOG0569|consen 236 AEIEEMLREIEEEEL-EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF-TPEEAQYANLG 313 (485)
T ss_pred hHHHHHHHHHHHhcc-ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC-CHHHHHHHHHH
Confidence 544443333332222 2246678999999864 45567778888899999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCc-hh---HHHHHHHHHHHHHhcccccccceee
Q 011657 319 LGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV-PA---VAVVALLLYVGCYQLSFGPIGWLMI 394 (480)
Q Consensus 319 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
.++..++..+++.++.||+|||++++.+..++.+..+++.......... .| ..+...+.+...+..+.+|+.+-+.
T Consensus 314 ~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~ 393 (485)
T KOG0569|consen 314 IGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIG 393 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHH
Confidence 9999999999999999999999999999998888877776543332222 22 3356667778888999999999999
Q ss_pred cccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhhhccC
Q 011657 395 SEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQRQRGLRLRRS 474 (480)
Q Consensus 395 ~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (480)
+|++|++.|+.+.++..+++.+..++....+..+.+..|. ..|+++.+.+.+..+..+++.||||+|+.++..++.++.
T Consensus 394 aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 394 AELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999997 788999999999999999999999999988877665544
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.7e-38 Score=313.30 Aligned_cols=391 Identities=16% Similarity=0.167 Sum_probs=285.2
Q ss_pred hhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Q 011657 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (480)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (480)
+..|.++++++++.+..+++...++.++|.+.++ ++++..+.+++.+++.++++++++++|+++||+|||+++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~-------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l 235 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKD-------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL 235 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 3455566777888889999999999999999887 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhh----
Q 011657 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLV---- 173 (480)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~---- 173 (480)
+++++++++++++++++++++.++++|+++|++.|+ +|.+++..+.
T Consensus 236 ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 236 LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987 3333333221
Q ss_pred h------------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCC-
Q 011657 174 D------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS- 240 (480)
Q Consensus 174 ~------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (480)
. ...+||+.+++.++++++.++..+++||+|+|+..++ +.+++.+.++++++.+....
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~g---------r~~eA~~iL~~i~~~n~~~~~ 386 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENG---------KHDEAWMILKLIHDTNMRAKG 386 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCC---------CHHHHHHHHHHHhcCCCCCcC
Confidence 1 1137999999999888888888888999999999888 78889999998876553221
Q ss_pred Chh-h--HHHHHHhhh-----c-ccccc-----------------cccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHH
Q 011657 241 APT-E--VDEILTELS-----Y-VGEDK-----------------EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVL 294 (480)
Q Consensus 241 ~~~-~--~~~~~~~~~-----~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
.+. . .+....... + ++... ...++++++.+.++..++...+. ++....++.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~w-f~~~~~yygl~ 465 (742)
T TIGR01299 387 HPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVW-FTLSFGYYGLS 465 (742)
T ss_pred chhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 111 0 000000000 0 00000 01355566666655555544444 44455667888
Q ss_pred HhHHHHHHhc------------------------------------------CC-------C-C------------C---
Q 011657 295 YYAASILQSA------------------------------------------GF-------S-A------------A--- 309 (480)
Q Consensus 295 ~~~~~~~~~~------------------------------------------g~-------~-~------------~--- 309 (480)
.|.|.+++.. |+ . + .
T Consensus 466 ~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (742)
T TIGR01299 466 VWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTF 545 (742)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchh
Confidence 8888775431 00 0 0 0
Q ss_pred -------------------------------------------------cchHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 011657 310 -------------------------------------------------SDATRVSILLGLFKLIMTGLAVLVVERLGRR 340 (480)
Q Consensus 310 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 340 (480)
........+..++.+++.++.|+++||+|||
T Consensus 546 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr 625 (742)
T TIGR01299 546 FKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL 625 (742)
T ss_pred hhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 0123445677789999999999999999999
Q ss_pred hHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHh
Q 011657 341 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANAL 420 (480)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i 420 (480)
+++.++.++.+++++++.+. .+....++..+++.++.. +..+..+++++|.+|++.|++++|+.++...+|+++
T Consensus 626 ~~l~~~~~lsai~~ll~~~~-----~s~~~ll~~~~l~g~~~~-~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaii 699 (742)
T TIGR01299 626 RMLAGSMVLSCISCFFLSFG-----NSESAMIALLCLFGGLSI-AAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVL 699 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888877766542 222333333333333333 334566689999999999999999999999999999
Q ss_pred HhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q 011657 421 VTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSF 463 (480)
Q Consensus 421 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (480)
+|.+.+.+.+. +...++++.+++.++++++.++ +||++++.
T Consensus 700 gp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~~~~ 740 (742)
T TIGR01299 700 GILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCcccc
Confidence 99999988774 4556777777777777666654 58888764
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.3e-37 Score=301.68 Aligned_cols=412 Identities=38% Similarity=0.584 Sum_probs=323.4
Q ss_pred hhHHhHHHHhhhhhccccc--ccccccccccccCCCCCCCccccCCh--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 011657 49 AAILPFLFPALGGLLYGYD--IGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADILGRR 124 (480)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 124 (480)
..........++.+..+++ .+..+++...+.++....+ ...+. .+.+|+.+.+.++..++++++|+++|++|||
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~--~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk 119 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD--LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRK 119 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3445556667788888887 6677777777776533222 22222 5679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhhh
Q 011657 125 RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLVD 174 (480)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~ 174 (480)
+.++++.+++.+|.+++++++|+.+++++|+++|+|.|+ +|..++..+..
T Consensus 120 ~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 120 KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999998 44444422222
Q ss_pred hh----hhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHH
Q 011657 175 LV----AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 250 (480)
Q Consensus 175 ~~----~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (480)
.. .+||..+.+..+++++..+..+++||+|+|+.+++ +.+++++.++++++.+.. +...+.+....
T Consensus 200 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g---------~~~~a~~~l~~l~g~~~~-~~~~~~~~~~~ 269 (513)
T KOG0254|consen 200 GTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG---------RLEEAKRSLKRLRGLSPE-DVEVELELLKI 269 (513)
T ss_pred hhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCc-chHHHHHHHHH
Confidence 21 27999999999999997777889999999999977 899999999999995522 22222222221
Q ss_pred h-h-hcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Q 011657 251 E-L-SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTG 328 (480)
Q Consensus 251 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 328 (480)
. . +......+..++++++....++..+...+..+.++++.+...+|.+.+++..|..++. .......++..+++..
T Consensus 270 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t~ 347 (513)
T KOG0254|consen 270 KLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGTL 347 (513)
T ss_pred HHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHHH
Confidence 1 1 1111122224667777556777888899999999999999999999999999983333 6777888888889999
Q ss_pred HHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC-------CchhHHHHHHHHHHHHHhcccccccceeecccCChh
Q 011657 329 LAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-------DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLR 401 (480)
Q Consensus 329 ~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 401 (480)
++.++.||+|||+.++.+...+.++.++++....... ...+..+...+++...+..++.|+.+.+.+|.+|.+
T Consensus 348 ~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~ 427 (513)
T KOG0254|consen 348 VATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLR 427 (513)
T ss_pred HHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHh
Confidence 9999999999999999999999999998886654432 234566777778888899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH-hcCCCCCCCCCChhhhhhhhhccC
Q 011657 402 LRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA-FIFXXXXXXXXSFQRQRGLRLRRS 474 (480)
Q Consensus 402 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 474 (480)
.|+.+.++...++.+.+.+.......+.+..+....|..++.++.+... ..+++.||+|+++.++.+...++.
T Consensus 428 ~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 428 LRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 9999999999999998888877777777665534567777776666666 778889999999999887765544
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.5e-37 Score=303.10 Aligned_cols=397 Identities=20% Similarity=0.239 Sum_probs=272.2
Q ss_pred HhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 011657 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (480)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 131 (480)
.++.++.++.+.+++|...++.+.|.+..+....+ .+.+..+.+++.+.+.+++.++++++|+++||+|||+++.++.
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGK--GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 34466678889999999999999888765422111 3567778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhh--
Q 011657 132 LLYLVGALVTALAPD------FIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLV-- 173 (480)
Q Consensus 132 ~~~~~~~~~~~~~~~------~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~-- 173 (480)
+++.+++++++++++ ++.++++|+++|++.|. +|..++..+.
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999876 78999999999999997 3333333322
Q ss_pred --h----------------------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhH-HHHHHH
Q 011657 174 --D----------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLR-ESAISC 228 (480)
Q Consensus 174 --~----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~-~~~~~~ 228 (480)
. ...+||++|.+.++++++..+..+++||||+|+..++ +. +++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~---------~~~~~a~~~ 244 (502)
T TIGR00887 174 VLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA---------KDVEQAASD 244 (502)
T ss_pred HHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhC---------cchHHHHHH
Confidence 1 0127999999999888887777889999999998776 33 345555
Q ss_pred HHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhh---hhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcC
Q 011657 229 LCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC---LKALIIGAGLVLFQQITGQPSVLYYAASILQSAG 305 (480)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 305 (480)
+++.++.+..++ .++.++..+ +++..+.+++++++++. .++..+.....++.....++....+.|.++++.|
T Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G 319 (502)
T TIGR00887 245 MSAVLQVKIEAE-PDEVEKAST----AVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG 319 (502)
T ss_pred HHHHhccccccC-cccccchhc----cccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHc
Confidence 555543322111 111111000 01112235777776432 2122232222222222233345566888888888
Q ss_pred CCCCcchHH------------HHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHH
Q 011657 306 FSAASDATR------------VSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVV 373 (480)
Q Consensus 306 ~~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (480)
+ +..+++. ......++.+++.++.++++||+|||+++..+..+.++++.++...... ........
T Consensus 320 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~~ 396 (502)
T TIGR00887 320 Y-SPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH--LSTHGFLA 396 (502)
T ss_pred C-CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh--cchhHHHH
Confidence 7 4432211 2334455677788999999999999999888887777766655543211 01111122
Q ss_pred HHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh----------CccHHHHHHHH
Q 011657 374 ALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL----------GAGILFYAFGV 443 (480)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~----------g~~~~~~~~~~ 443 (480)
...+....+..+..+..+.+..|.+|++.|+++.|+.+.++.++++++|.+.+.+.+.. ++...++++++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 476 (502)
T TIGR00887 397 IYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFAL 476 (502)
T ss_pred HHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHH
Confidence 22222233344556677788999999999999999999999999999999999998843 34457788888
Q ss_pred HHHHHHHhcCCCCCCCCCChhhhhh
Q 011657 444 IAVLSLAFIFXXXXXXXXSFQRQRG 468 (480)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (480)
+++++.+.. ++.||+|+++.+|.+
T Consensus 477 ~~~~~~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 477 FMFLGILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred HHHHHHHHh-eEeccCCCCCHHhhh
Confidence 887776654 457999998876654
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2e-36 Score=295.18 Aligned_cols=406 Identities=28% Similarity=0.505 Sum_probs=282.8
Q ss_pred HHhHHHHhhhhhcccccccccccccccccCCCCCC-CccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 011657 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (480)
..+.++..++.+.+++|...+++..|.++++.... .++++.+..+.+++.+++.++..++++++|+++||+|||+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 33445556788999999999999999887763211 01148899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc------------CchHHHHHHHHHHHHHHhH------------------------------hHHh
Q 011657 130 AALLYLVGALVTALA------------PDFIIMVVGRFVFGIGIGL------------------------------GGYG 167 (480)
Q Consensus 130 ~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~g~g~------------------------------~g~~ 167 (480)
+.++++++.+.++++ ++++.++++|+++|++.|. +|..
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999999888763 2256788999999999987 3333
Q ss_pred hhhhh----hh-------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCC
Q 011657 168 IGSLL----VD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 236 (480)
Q Consensus 168 ~g~~l----~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (480)
++..+ .. ...+||+.|++.+++.++..+..+++||+|+|+..++ +.+++++..++..+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~---------~~~~~~~~~~~~~~~~ 241 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRG---------KQEQAEGILRKIMGNT 241 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcC---------CHHHHHHHHHHHcCCh
Confidence 32221 10 1238999999998888876667788999999876555 4445555444443322
Q ss_pred CCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHH
Q 011657 237 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVS 316 (480)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (480)
.. ....++.......+. ...+..+. ..............+....+++...++.|.+.++.|. +........
T Consensus 242 ~~---~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~-~~~~~~~~~ 312 (479)
T PRK10077 242 LA---TQALQEIKHSLDHGR----KTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA-STDIALLQT 312 (479)
T ss_pred hH---HHHHHHHHHHHHHhh----hhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC-CCchHHHHH
Confidence 11 111111111100000 00011111 0111122222233344445555667788998888888 666677777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecc
Q 011657 317 ILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISE 396 (480)
Q Consensus 317 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
...++..+++.++.++++||+|||+++..+..+.+++.+++...... ...........+++..++...+.|..+.++.|
T Consensus 313 ~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 391 (479)
T PRK10077 313 IIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSE 391 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHhccccchhHHHhHh
Confidence 88889999999999999999999999999988888877766543221 11222333334444444554556777799999
Q ss_pred cCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH------HhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhh
Q 011657 397 VFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK------DLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQRQRGLR 470 (480)
Q Consensus 397 ~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (480)
.+|++.|+++.|+.+..++++.++++.+.+.+. +..++...|++.+++++++.++.+.+.+|+|+++.++.++.
T Consensus 392 ~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 392 IFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 999999999999999999999998877765443 56778888888888888888877777899998887776665
Q ss_pred hccCC
Q 011657 471 LRRSR 475 (480)
Q Consensus 471 ~~~~~ 475 (480)
.++.+
T Consensus 472 ~~~~~ 476 (479)
T PRK10077 472 WEPET 476 (479)
T ss_pred Hhhcc
Confidence 54443
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6e-36 Score=292.63 Aligned_cols=405 Identities=34% Similarity=0.564 Sum_probs=283.6
Q ss_pred hHHhHHHHhhhhhcccccccccccccccccCCCCCC-CccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Q 011657 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (480)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (480)
.+...++..++.++.+++...+++..+.+..+...+ +..-+.+..+.+++.+.+.++..++++++|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 344445667777889999999999998887661100 0001234899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhh--
Q 011657 129 LAALLYLVGALVTALAP---DFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLV-- 173 (480)
Q Consensus 129 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~-- 173 (480)
++.+++.++.+++.++. +++.+++.|+++|++.+. +|..++..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999996643 456899999999999887 4555555444
Q ss_pred -h---hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhh-HHHH
Q 011657 174 -D---LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE-VDEI 248 (480)
Q Consensus 174 -~---~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 248 (480)
. ...+||+.|++.++..++..+..+++||+|++...++ +.+++.+..++..+.+.......+ ....
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKG---------RVEEARKSLARLRGTSGEDKELLDELELI 256 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 1 2239999999977777777777788999998765444 222233333333222211111000 0000
Q ss_pred HHhhhcccccccccHHHHhhhh--hhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHH
Q 011657 249 LTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 326 (480)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 326 (480)
......+.+..+..+++.++.. ..++.+....+.++..........++.|.+.++.|. +..+.+.......++.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~ 335 (481)
T TIGR00879 257 DIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV-STDHAFLVSIIVGAVNFAF 335 (481)
T ss_pred HHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC-CchHHHHHHHHHHHHHHHH
Confidence 0000000111112233443322 134444445555555555556677888999899998 6788888999999999999
Q ss_pred HHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCc-----hhHHHHHHHHHHHHHhcccccccceeecccCChh
Q 011657 327 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV-----PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLR 401 (480)
Q Consensus 327 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 401 (480)
.++.++++||++||+.+..+..+.+++++++.......... ....+....++.+++..+..+....++.|.+|++
T Consensus 336 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 415 (481)
T TIGR00879 336 TFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS 415 (481)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChH
Confidence 99999999999999999888777777766655321111111 3334444455555566666677778889999999
Q ss_pred hhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChh
Q 011657 402 LRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQ 464 (480)
Q Consensus 402 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (480)
.|+++.|+.+...+++++++|.+.+.+.++.|+...|++.+++++++.++.+++.+|+|+++.
T Consensus 416 ~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 416 LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 999999999999999999999999999999999999999999988888887777777776543
No 7
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.1e-34 Score=280.45 Aligned_cols=360 Identities=21% Similarity=0.279 Sum_probs=255.3
Q ss_pred cccccccCCCCCCCccccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHH
Q 011657 73 CATISIESPTLSGISWYDLS---SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (480)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (480)
+..+.+.+| +|++ ..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.+++++++|++.
T Consensus 110 ~~~~~i~~e-------~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (505)
T TIGR00898 110 TFSSTIVTE-------WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTV 182 (505)
T ss_pred cccccEEEE-------ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 566777777 8998 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhH------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhc
Q 011657 150 MVVGRFVFGIGIGL------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 199 (480)
Q Consensus 150 l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 199 (480)
+++.|++.|++.+. +|..+++.+.....+||+.|++.+++.++..+..++
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999887 444444444444447999999999998887777788
Q ss_pred ccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHH
Q 011657 200 LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGA 279 (480)
Q Consensus 200 ~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (480)
+||+|+|+..++ +.+++.+.+++..+.+......+......++ +..++.++...+++++++..+...+..
T Consensus 263 ~~esp~~l~~~~---------~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~ 332 (505)
T TIGR00898 263 VPESPRWLISQG---------RIEEALKILQRIAKINGKKLPAEVLSLSLEK-DLSSSKKQYSFLDLFRTPNLRKTTLCL 332 (505)
T ss_pred cCCChHHHHHCC---------CHHHHHHHHHHHHHHcCCCCCHHHHhhhhhh-hhhhccCCCcHHHHhCChHHHHHHHHH
Confidence 999999998777 5566666666554433222211111111111 111112235778899888777665554
Q ss_pred HHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHH
Q 011657 280 GLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGS 359 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 359 (480)
.+.++.....+ +..+.+....+. + ........++..+++.++.+++.||+|||+.+..+.++.+++++++..
T Consensus 333 ~~~~~~~~~~~----~~~~~~~~~~~~-~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~ 404 (505)
T TIGR00898 333 MMLWFTTAFSY----YGLVLDLGNLGG-N---IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF 404 (505)
T ss_pred HHHHHHHHHHH----HHHhccccccCC-C---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 44443322111 122222333343 2 345556677888899999999999999999999888877777666543
Q ss_pred HhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHH
Q 011657 360 YYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFY 439 (480)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~ 439 (480)
. .....+......++...+... ..+..+.+..|.+|++.|+++.|+.++...+|++++|.+.+ .+..++..+++
T Consensus 405 ~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~--~~~~~~~~~~~ 478 (505)
T TIGR00898 405 V---PVDLYFLRTALAVLGKFGITS-AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY--LGEKWLFLPLV 478 (505)
T ss_pred c---CCCchHHHHHHHHHHHHHHHH-HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH--HHHHHHhhHHH
Confidence 2 112223233333333233222 33455688999999999999999999999999999999988 44456667888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCChh
Q 011657 440 AFGVIAVLSLAFIFXXXXXXXXSFQ 464 (480)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (480)
+++++.+++.++.++ .||+++++.
T Consensus 479 ~~~~~~~~~~~~~~~-lpet~~~~l 502 (505)
T TIGR00898 479 LFGGLALLAGILTLF-LPETKGVPL 502 (505)
T ss_pred HHHHHHHHHHHHHHc-CcCCCCCCC
Confidence 888877777666554 678877654
No 8
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3e-34 Score=246.99 Aligned_cols=385 Identities=18% Similarity=0.228 Sum_probs=281.2
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
+....+++.+....-..+-+.|..... .+.+..|..+++.....|..+++..||.++|++|||+.+.+.....
T Consensus 81 ~~ag~gwmad~m~~m~~s~i~~~l~~~-------w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 81 FVAGMGWMADAMEMMLLSLILPALDEV-------WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhh-------hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 334666666666666666667776665 7889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------hHHhhhhhhhh---hhhhhHHHH
Q 011657 135 LVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------GGYGIGSLLVD---LVAGWRYMY 183 (480)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------~g~~~g~~l~~---~~~~wr~~f 183 (480)
++...+.+.++|+..+.+.|.+.|+|.|+ +|.+....++. ...||||..
T Consensus 154 ~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l 233 (528)
T KOG0253|consen 154 GVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLL 233 (528)
T ss_pred HHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999998 33333333321 223999999
Q ss_pred hchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCCh--------hhHHHHH----Hh
Q 011657 184 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP--------TEVDEIL----TE 251 (480)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----~~ 251 (480)
.....+..+.....+++|||||++..++ ++++|.+.++++...+...... .+.+++. +.
T Consensus 234 ~~~~~pl~~~a~f~~w~~ESpRf~~~~G---------~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~ 304 (528)
T KOG0253|consen 234 FTSSTPLMFAARFLVWVYESPRFYLAKG---------DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDS 304 (528)
T ss_pred HHHHhHHHHHHHHHhhcccCcchhhhcC---------ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhh
Confidence 9988888888888999999999999988 8889988888876544332111 1111111 11
Q ss_pred hhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcC---CC----------------CCcch
Q 011657 252 LSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAG---FS----------------AASDA 312 (480)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~----------------~~~~~ 312 (480)
.....++.+.+..+++..+.++..++...+++...+..+..+ .....+.+... .. +...-
T Consensus 305 ~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~V-Llttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~d 383 (528)
T KOG0253|consen 305 KSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSV-LLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKD 383 (528)
T ss_pred hhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHhccCccccchhcchhHHHhhhcCCccchhH
Confidence 112234445677788876666666665555555444333222 22222222211 00 12223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccce
Q 011657 313 TRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWL 392 (480)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (480)
..-..+..+..++|.++.+++.||+|||+.+....+++++..+++... ..........+..-.+.+.++ ...+.
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c-----~~rn~~tvllf~arafisg~f-qvaYv 457 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC-----KTRNAYTVLLFTARAFISGAF-QVAYV 457 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh-----cCcchhHHHHHHHHHHHhchh-eEEEE
Confidence 344677888999999999999999999999999888888877766542 223333334444445555555 46679
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChh
Q 011657 393 MISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQ 464 (480)
Q Consensus 393 ~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (480)
|..|++|+..|+++.|.+...+.+|+++.|++. +........+..+++++++++.+...++.-|+|+|..
T Consensus 458 YtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred ecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999999999999999999887 5554555667888899999998888888889998753
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-33 Score=254.31 Aligned_cols=339 Identities=21% Similarity=0.236 Sum_probs=263.1
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (480)
.++.+.++.|..+.+.......+|++++| |++|..+.|++.|.|.+++.++.++...+.||+.||++++..+.
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~d-------l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAAD-------LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 33445777788899999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhh
Q 011657 133 LYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAG 178 (480)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~ 178 (480)
++.++++++++++||+.++++|++.|+..|. +|..+|.++.+.. |
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-G 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-h
Confidence 9999999999999999999999999999998 7888888888887 9
Q ss_pred hHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccc
Q 011657 179 WRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE 257 (480)
Q Consensus 179 wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (480)
||..|++.+.++++ .+..+..+| |+.. ..+..
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP--~~~~---------------------------------------------~~~~~ 198 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP--PSEI---------------------------------------------SGSLP 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CccC---------------------------------------------CCCCC
Confidence 99999999999998 455666788 2100 00011
Q ss_pred cccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011657 258 DKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL 337 (480)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 337 (480)
.+..+..+.+|++..+..++...+.+..++ ..++|..|.+.+..|+ +....++....+++++++|+.++|++.||
T Consensus 199 ~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F---~~ftYi~P~L~~v~g~-s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr- 273 (394)
T COG2814 199 GPLRTLLRLLRRPGVLLGLLATFLFMTGHF---ALYTYIRPFLESVAGF-SVSAVSLVLLAFGIAGFIGNLLGGRLADR- 273 (394)
T ss_pred cchhHHHHHhcCchHHHHHHHHHHHHcchh---hhHHhHHHHHHHccCC-CHhHHHHHHHHHHHHHHHHHHHHhhhccc-
Confidence 112235567777766666555554444333 3555566666666777 89999999999999999999999999999
Q ss_pred cCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHH
Q 011657 338 GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGA 417 (480)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g 417 (480)
+.|+.+.....+.++....+.+. ..+.+..+....+.+....... ........+..| +.+..+.+++....++|
T Consensus 274 ~~~~~l~~~~~l~a~~~l~l~~~----~~~~~~~~~~~~~wg~a~~~~~-~~~~~~~a~~~p-~~~~~a~sl~~aa~nlg 347 (394)
T COG2814 274 GPRRALIAALLLLALALLALTFT----GASPALALALLFLWGFAFSPAL-QGLQTRLARLAP-DAADLAGSLNVAAFNLG 347 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHHh----cchHHHHHHHHHHHHHHhhhhh-hHHHHHhcccCC-CchHHHHHHHHHHHHHH
Confidence 88888888777777766665542 2333333333333222222222 222234444334 78999999999999999
Q ss_pred HHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCC
Q 011657 418 NALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 418 ~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 457 (480)
..+|..+.|.+.|+.|+....++.+.+.+++.++.+...+
T Consensus 348 ia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 348 IALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988888888877665433
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.3e-33 Score=272.64 Aligned_cols=360 Identities=18% Similarity=0.229 Sum_probs=236.3
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCC--hh--HHHH--HHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLS--SV--EIGL--ITSGSLYGALIGSILAFNIADILGRRRELI 128 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~--~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (480)
+...++.++++||..+++...|.+.++ |+.+ +. ..+. +.++.++++.++++++|+++||+|||+++.
T Consensus 19 ~~~~~g~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 91 (490)
T PRK10642 19 TAASLGNAMEWFDFGVYGFVAYALGKV-------FFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-------hCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 455778899999999999999998877 5322 21 1222 257888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCchHH--------HHHHHHHHHHHHhH------------------------------hHHhhhh
Q 011657 129 LAALLYLVGALVTALAPDFII--------MVVGRFVFGIGIGL------------------------------GGYGIGS 170 (480)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~g~g~------------------------------~g~~~g~ 170 (480)
+++++++++++++++++|++. ++++|+++|++.|+ +|..+|+
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~ 171 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA 171 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875 88999999999987 3444444
Q ss_pred hhh----h-------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCC
Q 011657 171 LLV----D-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGD 239 (480)
Q Consensus 171 ~l~----~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (480)
.+. . ...|||+.|++.++++++..+....+||+|+|...++ +.++.. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~---------~~~~~~-------~~---- 231 (490)
T PRK10642 172 GVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVD---------KLEQGD-------RE---- 231 (490)
T ss_pred HHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHH---------hhhhhc-------cc----
Confidence 322 1 1248999999988776665666677899998753322 000000 00
Q ss_pred CChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHH
Q 011657 240 SAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSIL 318 (480)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~ 318 (480)
. ..+.++.++++++++ +++.........+ .....++....|.|.+++ ..|. +..+..+....
T Consensus 232 -----------~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~~~~ 294 (490)
T PRK10642 232 -----------G---LQDGPKVSFKEIATK-HWRSLLTCIGLVI-ATNVTYYMLLTYMPSYLSHNLHY-SEDHGVLIIIA 294 (490)
T ss_pred -----------c---ccccccCCHHHHHHH-hHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHH
Confidence 0 001122345666654 2233322222222 222334456668888875 4577 66677777788
Q ss_pred HHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccC
Q 011657 319 LGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVF 398 (480)
Q Consensus 319 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
..++.+++.++.|+++||+|||+.+..+.++..+....+.... ...+....+...++...+..... .....+..|.+
T Consensus 295 ~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~-g~~~~~~~~~~ 371 (490)
T PRK10642 295 IMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--NSNVIGLIFAGLLMLAVILNCFT-GVMASTLPAMF 371 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHC
Confidence 8888999999999999999999988776654333222211111 11222222222222222222222 23336777899
Q ss_pred ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-ccHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 011657 399 PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-AGILFYAFGVIAVLSLAFIFXXXXXXXXS 462 (480)
Q Consensus 399 p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (480)
|++.|+++.|+.+.+..+++.++|.+.+++.+..+ +...+++..+.++++.+..++ .||++++
T Consensus 372 p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~~~ 435 (490)
T PRK10642 372 PTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETANR 435 (490)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hccccCC
Confidence 99999999998777777788999999999988655 455555555555555554443 4666544
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-33 Score=246.25 Aligned_cols=361 Identities=16% Similarity=0.149 Sum_probs=260.5
Q ss_pred HHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 011657 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (480)
+-+++.+.+++..+.+.+-.++.+.|.+.+| .++|.+|.|++.+++.+.|+++..+.|.++||.+.|+.+.++
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~g 100 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIED-------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHH
Confidence 3445666888999999999999999999998 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhh------hhhhh
Q 011657 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIG------SLLVD 174 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g------~~l~~ 174 (480)
+++.++.+++++++++.+.+.+.-+++|...|. +|..+. +.+..
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 999999999999999999999999999998887 232222 23333
Q ss_pred hhhhhHHHHhchhHHHHHH-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhh-
Q 011657 175 LVAGWRYMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL- 252 (480)
Q Consensus 175 ~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 252 (480)
.. +||..|++.+++++++ ++.++..+++|+-.-... .++..++..+.
T Consensus 181 ~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~------------------------------ie~~~~d~~e~~ 229 (448)
T COG2271 181 HG-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP------------------------------IEEYRGDPLEIY 229 (448)
T ss_pred cc-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC------------------------------HHHhhcCchhhh
Confidence 33 9999999999999985 555666788885221100 01111000000
Q ss_pred hccccccccc-----HHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHH
Q 011657 253 SYVGEDKEVS-----LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMT 327 (480)
Q Consensus 253 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 327 (480)
+++++.+..+ .+-+++||..|.+.+...+.+.. -+.+..|.|.|+.+....+..++....+.+-.++++|.
T Consensus 230 ~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYiv----R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~ 305 (448)
T COG2271 230 EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVV----RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT 305 (448)
T ss_pred hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHH----HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH
Confidence 0011111123 33455666555554444444333 34777899988876544499999999999999999999
Q ss_pred HHHHHHHhhh--cCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhh
Q 011657 328 GLAVLVVERL--GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGR 405 (480)
Q Consensus 328 ~~~g~l~d~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 405 (480)
+++||++||+ |||....+.+.+.....++ . ++..++.+......++...+++..+..-+.-..+.|..|.+..|+
T Consensus 306 Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~--~-~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGt 382 (448)
T COG2271 306 LLAGWLSDKLFKGRRGPMALIFMLLITASLV--L-YWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGT 382 (448)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHH--H-HHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccc
Confidence 9999999997 5665554433332222222 2 222233344444444444455444444455567899999999999
Q ss_pred HHHHHHHHHHH-HHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 406 GLSVAVLVNFG-ANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 406 ~~~~~~~~~~~-g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
+.|+...+.++ |.+.+....|++.|..||...|.++.+.++++.++.....
T Consensus 383 A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 383 ATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 8899999999999999999998888777777666554433
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.6e-32 Score=261.80 Aligned_cols=346 Identities=23% Similarity=0.274 Sum_probs=242.1
Q ss_pred hHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 011657 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (480)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (480)
.+..+++..+..++++++....+...|.+.++ +|.++.+.+++.+.+.++..+++++.|+++||+|||+++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 13 LALTIGLCFLVALLEGLDLQSAGVAAPRMAQE-------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 34455555677788899999999999999987 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhh
Q 011657 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDL 175 (480)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~ 175 (480)
+.++.+++.+++++++|++.+++.|+++|++.+. +++.++..+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD 165 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999998876 233333333333
Q ss_pred hhhhHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhc
Q 011657 176 VAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 254 (480)
Q Consensus 176 ~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (480)
.+||+.|++.++..++ ..+...++||+|++...+. ..+
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~------------------------------- 204 (406)
T PRK11551 166 -AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG---------AGK------------------------------- 204 (406)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC---------cch-------------------------------
Confidence 3899999998876665 3445556898876432111 000
Q ss_pred ccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 011657 255 VGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVV 334 (480)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 334 (480)
.++...+..++.+..+.... .....+...........+.|.+.++.|. +..+.+.......++.+++.++.|++.
T Consensus 205 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~ 279 (406)
T PRK11551 205 ---QRAPVLRALFGEGRATATLL-LWISYFFTLIVLYFLLNWLPSLLVGQGL-SRSQAGLVQIAFNIGGALGSLLIGALM 279 (406)
T ss_pred ---hhhhhHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCC-ChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111111111111111 1111111122233555678888888888 888899999999999999999999999
Q ss_pred hhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHH
Q 011657 335 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVN 414 (480)
Q Consensus 335 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 414 (480)
||++||+.+..+.....+++.++.. ..+.+.... ..++.+....+..+..+++..|.+|++.|+++.|+.+...
T Consensus 280 dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 353 (406)
T PRK11551 280 DRLRPRRVVLLIYAGILASLAALAA-----APSFAGMLL-AGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVG 353 (406)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHh-----cCcHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhh
Confidence 9999999887766555555444332 122332222 2223333333334556688899999999999999999999
Q ss_pred HHHHHhHhhcchhhHHhhCc-cHHHHHHHHHHHHHHHhcCC
Q 011657 415 FGANALVTFAFSPLKDLLGA-GILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 415 ~~g~~i~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~ 454 (480)
.++..++|.+.|.+.+..+. ...++..+.+.+++.+..+.
T Consensus 354 ~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 354 RLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987553 33444554455554444443
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-32 Score=263.98 Aligned_cols=359 Identities=15% Similarity=0.116 Sum_probs=239.1
Q ss_pred HHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 011657 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (480)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 135 (480)
...+++++..++...++..+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLAD-------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 34555666667777788889999887 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHH
Q 011657 136 VGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRY 181 (480)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~ 181 (480)
++.+++++++|++.+++.|++.|++.|. +|+.+++.+.+.. +||+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~ 178 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRY 178 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHH
Confidence 9999999999999999999999998875 4444445554444 9999
Q ss_pred HHhchhHHHHHH-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccccc
Q 011657 182 MYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 260 (480)
Q Consensus 182 ~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (480)
.|++.++++++. ++..++++|+|++...+. ..+. + +++. +.. .+.++++
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~---~~~~--~-~~~~-----------------~~~-------~~~~~~~ 228 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPS---VGEW--R-HDAL-----------------ELA-------QQQEGAG 228 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCC---cccc--c-cccc-----------------ccc-------hhccccC
Confidence 999988877653 445556788875321000 0000 0 0000 000 0000011
Q ss_pred ccHHH-----HhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 011657 261 VSLRE-----VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVV 334 (480)
Q Consensus 261 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 334 (480)
.+.++ .++++..+...+...+ .......+..|.|.+++ +.|+ +..+++...+...+++++++++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~l~~~~g~-s~~~a~~~~~~~~~~~~~g~~~~g~l~ 303 (434)
T PRK11663 229 LSRKEILTKYVLLNPYIWLLSFSYVL----VYVVRAAINDWGNLYMSETLGV-DLVTANSAVSMFELGGFIGALVAGWGS 303 (434)
T ss_pred CChhhhHHHHHhcChHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 12222 3334433333222222 22223355567788774 5677 888899999999999999999999999
Q ss_pred hhh--cCchHH-HhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHH
Q 011657 335 ERL--GRRPLL-LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAV 411 (480)
Q Consensus 335 d~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 411 (480)
||+ ++|+.. ........+....+... ...+... .....+..+.+..+..........|.+|++.|+++.|+.+
T Consensus 304 dr~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 379 (434)
T PRK11663 304 DKLFNGNRGPMNLIFAAGILLSVGSLWLM---PFASYVM-QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVG 379 (434)
T ss_pred HHhccCCccHHHHHHHHHHHHHHHHHHHc---ccccHHH-HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHH
Confidence 998 333332 22111212222111111 1112222 2122222222222111122346689999999999999999
Q ss_pred HHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 011657 412 LVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXX 461 (480)
Q Consensus 412 ~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (480)
+..++|++++|.+.|.+.|..|+...|++.+++++++.+..+...+++++
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 99999999999999999999999999999888888877766554444443
No 14
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=6.1e-32 Score=256.76 Aligned_cols=358 Identities=18% Similarity=0.161 Sum_probs=237.5
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (480)
.+.+++++++++.+|...++...|.+.+| +|.+..+.+++.+++.+++.+++++.|+++||+|||+++..+++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~ 81 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKD-------LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMV 81 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhh-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHH
Confidence 44555677788899999999999999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhh----
Q 011657 133 LYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVD---- 174 (480)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~---- 174 (480)
+++++++++++++|++.+++.|+++|++.+. +|+.+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 82 LWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999987 34444444432
Q ss_pred -hhhhhHHHHhchhHHHHHH-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhh
Q 011657 175 -LVAGWRYMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 252 (480)
Q Consensus 175 -~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (480)
...+||+.|++.++++++. .+..+++||+|+.. +. . ..++.+...+..+..+.+.+.++ +..
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~-------~~-l--~~~~~~~~~~~~~~~~~~~~~~~------~~~ 225 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA-------KW-L--DEEDKKALKEMIDNDQLTLEQPE------GAF 225 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC-------CC-C--CHHHHHHHHHHHHhccccccccc------ccc
Confidence 1249999999998888774 44556788987410 00 0 00111111111111110000000 000
Q ss_pred hcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhc--CCCCCcchHHHHHHHHHHHHHHHHHH
Q 011657 253 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA--GFSAASDATRVSILLGLFKLIMTGLA 330 (480)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (480)
+......+..++++++ +..+ ...+.+++.......+..|.|.++++. +. +..+++.......++.+++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-s~~~~~~~~~~~~l~~~~g~l~~ 299 (412)
T TIGR02332 226 AHAAMPQRSMLREIFT-PAIM----LYTLAYFCLTNTLSAINIWTPQILQSFNQGS-SNIMIGLLAAIPQFCTIFGMIWW 299 (412)
T ss_pred ccccccHHHHHHHhcC-hHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-cHHHhHHHhhHHHHHHHHHHHHH
Confidence 0000000112333332 2222 222333333344556778899999875 44 66788889999999999999999
Q ss_pred HHHHhhhcCchHH-HhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHH
Q 011657 331 VLVVERLGRRPLL-LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSV 409 (480)
Q Consensus 331 g~l~d~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 409 (480)
|+++||+++|+.. .....+..++. ++.. . .......+....+...+. ....+..+....|.+|++.|+++.|+
T Consensus 300 g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~--~--~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~ 373 (412)
T TIGR02332 300 SRHSDRLKERKHHTALPYLFAAAGW-LLAS--A--TDHNLIQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAV 373 (412)
T ss_pred HHHhcccCccHHHHHHHHHHHHHHH-HHHH--h--cCCHHHHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHH
Confidence 9999999977643 33333333332 2211 1 122222222122211111 11123334556778999999999999
Q ss_pred HHHHHHHHHHhHhhcchhhHHhhC-ccHHHHHHHHHH
Q 011657 410 AVLVNFGANALVTFAFSPLKDLLG-AGILFYAFGVIA 445 (480)
Q Consensus 410 ~~~~~~~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~ 445 (480)
.+...++|++++|.+.|.+.|..| |...+++.+++.
T Consensus 374 ~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 374 INATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 999999999999999999999875 887777766544
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4.2e-32 Score=260.69 Aligned_cols=357 Identities=17% Similarity=0.196 Sum_probs=243.2
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
....++++.++++.....+.+|.+.++ +|+++.+.+++.+.+.+++.+++++.|+++||+|||+++.++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKAD-------LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 444667778889998999999999887 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhhh---hhhhhHH
Q 011657 135 LVGALVTALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLVD---LVAGWRY 181 (480)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~---~~~~wr~ 181 (480)
++++++++++++++.++++|+++|++.+. +|..+++.+.. ...+||+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~ 173 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRA 173 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHH
Confidence 99999999999999999999999999875 44444443332 2238999
Q ss_pred HHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc
Q 011657 182 MYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 261 (480)
Q Consensus 182 ~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (480)
.|++..+..++........||++++...+. ...+... + ...+..+.
T Consensus 174 ~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~---------------------~~~~~~~--~-----------~~~~~~~~ 219 (426)
T PRK12307 174 AFFVGLLPVLLVIYIRARAPESKEWEEAKL---------------------SGKGKHS--Q-----------SAWSVFSL 219 (426)
T ss_pred HHHHHHHHHHHHHHHHHHCCCChHHHHhhh---------------------hcccccc--c-----------cchhhhhH
Confidence 998865544443333334566654321110 0000000 0 00001112
Q ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCch
Q 011657 262 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 341 (480)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 341 (480)
.++++++++.++.........+. .+.....+..+.|.++++.|. +..+.+.......++.+++.++.+++.||++||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFS-IFGANWPIFGLLPTYLAGEGF-DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 45677777665544433222222 222222355677888888887 7788888889999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhH
Q 011657 342 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALV 421 (480)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~ 421 (480)
.+..+.++..+..+.+... ............+.......+..+....++.|.+|++.|+++.|+.+....+++.++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~g 373 (426)
T PRK12307 298 TFSIGLLMSFLFIFPLFRI----PQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFN 373 (426)
T ss_pred HHHHHHHHHHHHHHHHHHH----ccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHH
Confidence 8887776665554433221 112222221111111122222333444678899999999999999999999999999
Q ss_pred hhcchhhHHhhCccHH-HHHHHHHHHHHHHhcCCCCCC
Q 011657 422 TFAFSPLKDLLGAGIL-FYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 422 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 458 (480)
|.+.|.+.+..|+... +++.+..+.++.....+..|+
T Consensus 374 p~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (426)
T PRK12307 374 SMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPD 411 (426)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCCh
Confidence 9999999999886553 333333344444333333343
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.2e-32 Score=266.54 Aligned_cols=364 Identities=15% Similarity=0.073 Sum_probs=242.0
Q ss_pred hHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 011657 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (480)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (480)
.+..+....+++++...++..+++..|.+.+| +|++..+.|++.+.+.+++.+++++.|+++||+|||+++.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 99 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMIST-------YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPF 99 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHH
Confidence 44455666777788888999999999999988 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhhh
Q 011657 130 AALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLVD 174 (480)
Q Consensus 130 ~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~ 174 (480)
++++++++.++.++ ++|++.+++.|+++|++.+. +|..+++.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 100 LLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 88888877776655 68999999999999998875 55555555432
Q ss_pred ----h--hhhhHHHHhchhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHH
Q 011657 175 ----L--VAGWRYMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDE 247 (480)
Q Consensus 175 ----~--~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (480)
. ..+||..|.+.++++++..+ .+++.+++|+...... .++ . ..+.. . . ++
T Consensus 180 ~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~----------~~~---~---~~~~~-~---~---~~ 236 (467)
T PRK09556 180 WGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGK----------AEE---I---FGEPI-S---E---ED 236 (467)
T ss_pred HHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCC----------hhh---c---ccCcc-c---h---hh
Confidence 1 12599999888888776444 4445577664210000 000 0 00000 0 0 00
Q ss_pred HHHhhhccccccccc-HHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHH
Q 011657 248 ILTELSYVGEDKEVS-LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLI 325 (480)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 325 (480)
+..+.++...... .+..++++..+...+... +..........|.|.|+++ .|. +..+++.......++.++
T Consensus 237 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~p~yl~~~~g~-s~~~a~~~~~~~~~~~~i 309 (467)
T PRK09556 237 --KETESTDMTKWQIFVEYVLKNPVIWLLCFANI----FLYIVRIGIDNWSPVYAFQELGF-SKEDAINTFTLFEIGALV 309 (467)
T ss_pred --hccccccCcHHHHHHHHHHcChHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHHHHHHHHH
Confidence 0000000000001 122455555444333222 2222233566788887754 677 888899999999999999
Q ss_pred HHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhh
Q 011657 326 MTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGR 405 (480)
Q Consensus 326 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 405 (480)
+.++.|+++||++||+.+.....+..++..++.. . ...+.+...+..+.++ ....+..........|.+|++.+|+
T Consensus 310 g~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~p~~~~g~ 385 (467)
T PRK09556 310 GSLLWGWLSDLANGRRALVACIALALIIFTLGVY--Q-HATSEYMYLASLFALG-FLVFGPQLLIGVAAVGFVPKKAIGV 385 (467)
T ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH--H-hcCcHHHHHHHHHHHH-HHHhhHHHHHHHHHHhhcchhhHHH
Confidence 9999999999999988766544433333222211 1 1222222222222222 2221211122245669999999999
Q ss_pred HHHHHHHHHHH-HHHhHhhcchhhHH------------hhCccHHHHHHHHHHHHHHHhcCC
Q 011657 406 GLSVAVLVNFG-ANALVTFAFSPLKD------------LLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 406 ~~~~~~~~~~~-g~~i~~~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
+.|+.+..+++ |++++|.+.|.+.| ..||+..|++.+++.+++.+..+.
T Consensus 386 a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 386 ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 77999999999999 578888998888877777666554
No 17
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.5e-39 Score=312.96 Aligned_cols=397 Identities=30% Similarity=0.543 Sum_probs=295.1
Q ss_pred hhhhhcccccccccccccccccCCC---CCCCcc-ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPT---LSGISW-YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 133 (480)
.++.+.++||...++...+...... ....++ .+.+..+.+++.+...+|..+|++++|.++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4566888999888777666555211 111110 111346789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---chHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhhh---h-h
Q 011657 134 YLVGALVTALAP---DFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLVD---L-V 176 (480)
Q Consensus 134 ~~~~~~~~~~~~---~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~---~-~ 176 (480)
..+++++.++++ |++.+.++|+++|++.|+ +|..++..+.. . .
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 999999999999999998 44444444331 1 1
Q ss_pred --hhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhc
Q 011657 177 --AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 254 (480)
Q Consensus 177 --~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (480)
..||+.+++.++++++..+..+++||||+|+..++ +.+||++.++++++.+..+... ++..++.++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~---------~~~~A~~~l~~~~~~~~~~~~~---~~~~~~~~~ 233 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKG---------RDEEAEKVLRKLRGKEIEDEEI---EEIKAEKKE 233 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccc---------cccccccccccccccccccccc---ccccccccc
Confidence 25999999999999887778889999999999888 7778888888866553332221 111111111
Q ss_pred ccccccccHHHHhhhhh-hhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 011657 255 VGEDKEVSLREVFHGKC-LKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLV 333 (480)
Q Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l 333 (480)
.+ +.+..++++++++. +++......+..+..+.+.....+|.+.+++..+. +.. ........+...++.+++.++
T Consensus 234 ~~-~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 309 (451)
T PF00083_consen 234 SQ-ESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGI-SNS--FLATLILGLVNFLGTLLAIFL 309 (451)
T ss_pred cc-ccceeeeecccccccccccccccccccccccccccccccccccccccccc-ccc--ccccccccccccccccccccc
Confidence 11 11256777777754 44555555666666666666777888888888877 333 444556667777888888899
Q ss_pred HhhhcCchHHHhhhHHHHHHHHHHH-HHhhccCCc---hhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHH
Q 011657 334 VERLGRRPLLLGGVSGIVISLFLLG-SYYLFLDDV---PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSV 409 (480)
Q Consensus 334 ~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 409 (480)
.||+|||++++.+..+.+++.+.++ ......... ....+....+....+..++.+..+.+..|.+|++.|+++.|+
T Consensus 310 ~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~ 389 (451)
T PF00083_consen 310 IDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGL 389 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 9999999999988888777776664 111111111 333344444455566667778888999999999999999999
Q ss_pred HHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhh
Q 011657 410 AVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQRQRGLR 470 (480)
Q Consensus 410 ~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (480)
...++.+++++++.+...+.+..+....+.+.++++++..++.+++.||+|+++.+|.++.
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 9999999999999999999988885668888888888888888899999999999887654
No 18
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-32 Score=245.13 Aligned_cols=409 Identities=16% Similarity=0.187 Sum_probs=285.8
Q ss_pred CcccchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCcc-ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 42 PENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISW-YDLSSVEIGLITSGSLYGALIGSILAFNIADI 120 (480)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr 120 (480)
....+|+....+ .+..++.|.++||..+++.+.|.+...-+.+++. =+.++.-.+.+..+..+|.++||+++|+++||
T Consensus 32 ~~g~qw~~fk~i-~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~ 110 (538)
T KOG0252|consen 32 SEGLQWKHFKAI-IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDK 110 (538)
T ss_pred ccchhHHHHHHH-HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334466655544 6778999999999999999988877543322210 12467778899999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHhH------------------------------
Q 011657 121 LGRRRELILAALLYLVGALVTALAPD-------FIIMVVGRFVFGIGIGL------------------------------ 163 (480)
Q Consensus 121 ~Grr~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~r~l~G~g~g~------------------------------ 163 (480)
+|||+++...++++.+++++++++.. ..++...|++.|+|.|+
T Consensus 111 ~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg 190 (538)
T KOG0252|consen 111 FGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQG 190 (538)
T ss_pred hcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecc
Confidence 99999999999999999998888632 47888999999999999
Q ss_pred hHHhhhhhhhh------------------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHH
Q 011657 164 GGYGIGSLLVD------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESA 225 (480)
Q Consensus 164 ~g~~~g~~l~~------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~ 225 (480)
.|...|+.+.- ...=||..|.+.+++++......+.+||++++.....+ +.+.+
T Consensus 191 ~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~--------~~~~a 262 (538)
T KOG0252|consen 191 FGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSK--------KLKQA 262 (538)
T ss_pred hhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhc--------CHhhh
Confidence 44444544431 11259999999999999999999999999988633220 11111
Q ss_pred HHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc---cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH
Q 011657 226 ISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV---SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ 302 (480)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (480)
.+..++.... ++++.... +.....++. .+...+..++ -+.++.....++..-..++....+...+++
T Consensus 263 ~~d~~k~~~~--------~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~h-g~~Llgt~~~WFllDiafy~~nL~~s~I~~ 332 (538)
T KOG0252|consen 263 AGDMKKVLSV--------DIEAESTA-ESDVPPPSNSFGLFSRLFLRWH-GKHLLGTAGTWFLLDIAFYGQNLFQSVIFS 332 (538)
T ss_pred hhcccccccc--------ccchhhcc-ccCCCCcccccchHHHHHHHHH-HHHHHHHHHHHHhhhhhhhccccHHHHHHH
Confidence 1111111111 00000000 011111111 2233333322 244555556666555566677778888888
Q ss_pred hcCCCCCcchH--------HHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHH
Q 011657 303 SAGFSAASDAT--------RVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVA 374 (480)
Q Consensus 303 ~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (480)
..|..+..+.. ....+...+.++|..+...++|++|||+..+.+++++.+..+.++..+.. ..+.....+.
T Consensus 333 ~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~-~~~~~Gf~v~ 411 (538)
T KOG0252|consen 333 AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ-LENTIGFVVL 411 (538)
T ss_pred hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc-ccccCceeeh
Confidence 88874333222 11223333334466667788999999999999999999888877653321 1123334444
Q ss_pred HHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-----hhCccHHHHHHHHHHHHHH
Q 011657 375 LLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-----LLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~ 449 (480)
..+...+...+.......+.+|.+|++.|+++.|+....+..|++++...+.++.+ ..|.+.+++++++++.++.
T Consensus 412 y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi 491 (538)
T KOG0252|consen 412 YSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGI 491 (538)
T ss_pred HHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhH
Confidence 55555666666777777899999999999999999999999999999999999999 7888999999999999998
Q ss_pred HhcCCCCCCCCCChhhhhhhhh
Q 011657 450 AFIFXXXXXXXXSFQRQRGLRL 471 (480)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~ 471 (480)
++.++ .||+|++.+++.+.+.
T Consensus 492 ~~T~l-~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 492 LFTLL-IPETKGKSLEEISNEE 512 (538)
T ss_pred heeEE-eecccccCHHHhcChh
Confidence 88776 5699999988765443
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.5e-31 Score=253.41 Aligned_cols=329 Identities=17% Similarity=0.200 Sum_probs=233.5
Q ss_pred hhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 011657 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~ 138 (480)
++.+....+.....+.+|.+.+| +|.+..+.+++.+.+.+++.++++++|+++||+|||+++..+.+++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 88 (390)
T PRK03545 16 LAAFIFNTTEFVPVGLLSDIAQS-------FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASH 88 (390)
T ss_pred HHHHHHHhHHHHHHcchHHHHhH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 33344434444556678888888 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHh
Q 011657 139 LVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYG 184 (480)
Q Consensus 139 ~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~ 184 (480)
+++++++|++.++++|+++|++.+. +|+.+++.+.+.. +||+.|+
T Consensus 89 ~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~ 167 (390)
T PRK03545 89 VLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFL 167 (390)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHH
Confidence 9999999999999999999998765 5555566555554 9999999
Q ss_pred chhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccH
Q 011657 185 ASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 263 (480)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (480)
+.++++++..+ ....+||.|+ + ++....+.
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~-----~--------------------------------------------~~~~~~~~ 198 (390)
T PRK03545 168 AIGGGALITLLLLIKLLPLLPS-----E--------------------------------------------HSGSLKSL 198 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC-----C--------------------------------------------CcchHHHH
Confidence 99988776443 3444565431 0 00001123
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 264 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
++.++++..+.......+..... .....+.+.++++ .|. +..+.+.......++.+++.++.+++.||+++|..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~ 273 (390)
T PRK03545 199 PLLFRRPALVSLYLLTVVVVTAH----FTAYSYIEPFVQQVAGL-SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL 273 (390)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Confidence 45666665554433322222221 1223344444444 576 78889999999999999999999999999998765
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
. .+..+..++...+... ..+.+.......+. +.......+.....+.+..| +.++++.|+.+...++|..+||
T Consensus 274 ~-~~~~~~~~~~~~l~~~----~~~~~~~~~~~~l~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~ 346 (390)
T PRK03545 274 L-IAIALLLVCLLLLLPA----ANSEWHLSVLSIFW-GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGA 346 (390)
T ss_pred H-HHHHHHHHHHHHHHHH----hchHHHHHHHHHHH-HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHH
Confidence 4 3433333333322211 12233333333333 33333333444466777777 6789999999999999999999
Q ss_pred hcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 423 FAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 423 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
.+.|.+.|+.|++..+++.+++.+++.+..+...
T Consensus 347 ~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 347 LLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999888888777765544
No 20
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.8e-31 Score=252.32 Aligned_cols=345 Identities=15% Similarity=0.135 Sum_probs=241.1
Q ss_pred HHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 011657 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (480)
|.+...++++.+..... ...++.+|.+++| +|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~ 80 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQA-------SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAIS 80 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHH
Confidence 33434444444433333 5678999999988 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----------------------------hHHhhhhh----hhhhhh
Q 011657 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL-----------------------------GGYGIGSL----LVDLVA 177 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~-----------------------------~g~~~g~~----l~~~~~ 177 (480)
..+++++.+++++++|++.++++|+++|++.+. .|..+|+. +.+...
T Consensus 81 ~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~ 160 (393)
T PRK09705 81 LLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE 160 (393)
T ss_pred HHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999997 23344433 334434
Q ss_pred hhHHHHhchhHHHHHHHHHHhccc-CchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccc
Q 011657 178 GWRYMYGASTPLAVIMGMGMWWLP-ASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVG 256 (480)
Q Consensus 178 ~wr~~f~~~~~~~~~~~~~~~~~~-e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (480)
+||+.+.+.++..++..+..+... +.|+ + + +
T Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----------~--------------------------------~ 192 (393)
T PRK09705 161 TWYQTLAWWALPAVVALFAWWWQSAREVA-----S-----------S--------------------------------H 192 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCc-----c-----------c--------------------------------c
Confidence 899988776666554333332221 1110 0 0 0
Q ss_pred ccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 257 EDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER 336 (480)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 336 (480)
++ +...++.++++..+...+... .....+.....+.|.++++.|. +..+++.......++.++++++.+++.||
T Consensus 193 ~~-~~~~~~~l~~~~~~~l~~~~~----~~~~~~~~~~~~lp~~l~~~g~-s~~~ag~~~~~~~i~~i~g~~~~g~l~~r 266 (393)
T PRK09705 193 KT-TTTPVRVVFTPRAWTLGVYFG----LINGGYASLIAWLPAFYIEIGA-SAQYSGSLLALMTLGQAAGALLMPAMARH 266 (393)
T ss_pred CC-CcCCcccccCHhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCC-ChhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 001122333343333222221 1222334566778888888888 88899999999999999999999999999
Q ss_pred hcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccC-ChhhhhhHHHHHHHHHH
Q 011657 337 LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVF-PLRLRGRGLSVAVLVNF 415 (480)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~ 415 (480)
++||+.+..+..+..++..++... +.+.... . ..+.+.+.+ ...+.......+.. |++.+++..|+.+.+.+
T Consensus 267 ~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~-~-~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 339 (393)
T PRK09705 267 QDRRKLLMLALVLQLVGFCGFIWL----PLQLPVL-W-AMVCGLGLG-GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF 339 (393)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHc----cchHHHH-H-HHHHHHhcc-chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 999998888777666665544321 1112111 1 122222222 22344444555665 46789999999999999
Q ss_pred HHHHhHhhcchhhHHhhC-ccHHHHHHHHHHHHHHHhcCCCCCCCCCChh
Q 011657 416 GANALVTFAFSPLKDLLG-AGILFYAFGVIAVLSLAFIFXXXXXXXXSFQ 464 (480)
Q Consensus 416 ~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (480)
+++.++|.+.|++.|..| +...|.+.++++++..++.+.+.+|++++..
T Consensus 340 ~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 340 IIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 999999999999999987 5667777777777777777777888776543
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=5.8e-31 Score=252.24 Aligned_cols=345 Identities=17% Similarity=0.209 Sum_probs=221.2
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHH---HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIG---LITSGSLYGALIGSILAFNIADILGRRRELIL 129 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (480)
.+....++.+++.+|...++...|.+.++.... +.+..+.+ .+.+..+++..++++++|+++||+|||+++..
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPS----GNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 334556788899999999999999988771110 34455443 34455556666999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHhH------------------------------hHHhhhhh
Q 011657 130 AALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGL------------------------------GGYGIGSL 171 (480)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~g~g~------------------------------~g~~~g~~ 171 (480)
++++++++++++++++++. .++++|+++|++.|+ .|..++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 588999999999886 23333332
Q ss_pred h----hh-------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCC
Q 011657 172 L----VD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS 240 (480)
Q Consensus 172 l----~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (480)
+ .. ...|||++|++.++++++.......+||+|++..+
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~------------------------------- 227 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR------------------------------- 227 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh-------------------------------
Confidence 2 11 13499999999888887765556667887642100
Q ss_pred ChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHH
Q 011657 241 APTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILL 319 (480)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 319 (480)
+.++..+++++++++..+...+.. .+.....++.+..|.|.++++ .|. +..+.+......
T Consensus 228 ---------------~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~lp~~l~~~~g~-s~~~~~~~~~i~ 288 (432)
T PRK10406 228 ---------------ALKEAGSLKGLWRNRRAFIMVLGF---TAAGSLCFYTFTTYMQKYLVNTAGM-HANVASGIMTAA 288 (432)
T ss_pred ---------------hhcccccHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHH
Confidence 000112466777655443322221 111122233456677877754 577 777788888888
Q ss_pred HHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCC
Q 011657 320 GLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFP 399 (480)
Q Consensus 320 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 399 (480)
.++..++.++.|+++||++||+.+..+..+..+....+.... ....+....+....+...... ...+..+.+..|.+|
T Consensus 289 ~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~fp 366 (432)
T PRK10406 289 LFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL-QNVSSPYAAFGLVMCALLIVS-FYTSISGILKAEMFP 366 (432)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCC
Confidence 888888899999999999999887665554333322111111 111222222221211111111 122344577899999
Q ss_pred hhhhhhHHHHHHHHHHH-HHHhHhhcchhhHHhhC-ccHHHHHHHHHHHHHHHhcCC
Q 011657 400 LRLRGRGLSVAVLVNFG-ANALVTFAFSPLKDLLG-AGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 400 ~~~~~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 454 (480)
++.|+++.|+.+.+.++ .+...|.+.+. .+..| +...+++.+++.+++.+..++
T Consensus 367 ~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 367 AQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred CCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988664 34457777774 45556 444555555666666555444
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.3e-30 Score=248.99 Aligned_cols=349 Identities=19% Similarity=0.218 Sum_probs=232.9
Q ss_pred HHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 011657 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (480)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 133 (480)
+....++++.++++....+++.|.+.++ +|.+..+.+++.+.+.++..+++++.|+++||+|||+++.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGE-------FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3455778889999999999999999888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhh-hh
Q 011657 134 YLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLV-AG 178 (480)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~-~~ 178 (480)
.++++++++++++++.+++.|+++|++.+. +|+.+++.+.+.. .+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999998876 3333333333333 14
Q ss_pred hHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccc
Q 011657 179 WRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGED 258 (480)
Q Consensus 179 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (480)
||+.|++.+++.++..+....+||++++..+++ +.++..+..++..+.+.. .+.. .++
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~------~~~~-------~~~ 224 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWKEKHA---------GKALVRTMVDILYGGEHR------IANI-------VMT 224 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhh---------hhhhhhhHHHHHhccchh------hhhh-------hhh
Confidence 999999877766666666667888876432221 001111111111110000 0000 000
Q ss_pred ccccHHHHhhhhhhhHHHH-HHHHHHHHHhhChhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 259 KEVSLREVFHGKCLKALII-GAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER 336 (480)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 336 (480)
.....++.. +..+..+. ......+.... ......+.|.++ ++.|. +..+.+.......++.+++.++.+++.||
T Consensus 225 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 300 (405)
T TIGR00891 225 LAAAMVQSA--GKRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLKADLGL-SPHTVANIVVFSNIGAIVGGCVFGFLGDW 300 (405)
T ss_pred hhHHhhhhh--hhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 11111111 11111111111 123334455555 45677 88889999999999999999999999999
Q ss_pred hcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHH
Q 011657 337 LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFG 416 (480)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 416 (480)
++||+.+..+..+..+....+.. . ..+.+.......+. +....+..+....++.|.+|++.|+++.|+.+.+.++
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 375 (405)
T TIGR00891 301 LGRRKAYVCSLLAGQLLIIPVFA--I--GANVAVLGLGLFFQ-QMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL 375 (405)
T ss_pred hCchhhhHHHHHHHHHHHHHHHH--h--CCchHHHHHHHHHH-HHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH
Confidence 99999887776654333222211 1 22222222222222 2333333445557889999999999999999999999
Q ss_pred HHHhHhhcchhhHHhhC-ccHHHHH
Q 011657 417 ANALVTFAFSPLKDLLG-AGILFYA 440 (480)
Q Consensus 417 g~~i~~~~~~~~~~~~g-~~~~~~~ 440 (480)
++.++|.+.|.+.|+.| |...+..
T Consensus 376 g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 376 GGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHhccccchhHHh
Confidence 99999999999999988 6654443
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.9e-30 Score=254.17 Aligned_cols=369 Identities=16% Similarity=0.159 Sum_probs=236.2
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (480)
.+..+.++.++++++....++.+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGE-------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 33445667778888988999999999887 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhh
Q 011657 133 LYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAG 178 (480)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~ 178 (480)
+.+++.+++++++|++.+++.|++.|++.+. +|+.+++.+.+.. +
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~ 172 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-G 172 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-C
Confidence 9999999999999999999999999998775 3444444444444 9
Q ss_pred hHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHH--HHhhhccc
Q 011657 179 WRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEI--LTELSYVG 256 (480)
Q Consensus 179 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 256 (480)
||+.|++.++..++..+....+||++++...++.+.+. .+..+.....+.. ......... ......-.
T Consensus 173 w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (496)
T PRK03893 173 WRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPV---------RTMVDILYRGEHR-IINILLTLAAAAALWFCFA 242 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccc---------hhHHHHHhcchhH-HHHHHHHHHHHHHHHHHHH
Confidence 99999876555544444555678876543221100000 0000000000000 000000000 00000000
Q ss_pred ccccccHH-------------HH-h-hhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHH
Q 011657 257 EDKEVSLR-------------EV-F-HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLG 320 (480)
Q Consensus 257 ~~~~~~~~-------------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 320 (480)
......+. .. . .....++.........+..+........+.|.+++ +.|. +..+.+...+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~-~~~~~g~~~~~~~ 321 (496)
T PRK03893 243 GNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGY-DPHTVANVLFFSG 321 (496)
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCC-CHHHHHHHHHHHH
Confidence 00000000 00 0 00011111111112222222222234567788885 6777 8889999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCCh
Q 011657 321 LFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPL 400 (480)
Q Consensus 321 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 400 (480)
++.+++.++.|++.||++||+.+..+..+..+..+.+... .....+......+...+...+..+....++.|.+|+
T Consensus 322 ~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (496)
T PRK03893 322 FGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI----GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT 397 (496)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc----cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH
Confidence 9999999999999999999998877665555444332211 122222222222222223333334555788899999
Q ss_pred hhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHH
Q 011657 401 RLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVI 444 (480)
Q Consensus 401 ~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~ 444 (480)
+.|++++|+.+....+|+.++|.+.|.+.+..|+...+...+++
T Consensus 398 ~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 398 EQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 99999999999999999999999999999999988776555443
No 24
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.1e-30 Score=250.91 Aligned_cols=359 Identities=14% Similarity=0.102 Sum_probs=249.6
Q ss_pred HHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 011657 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (480)
+..+..++++.++...|.++++.++|.+.+| +|.+..+.+|+.+.|.+++.++++++|+++||+|||++++++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~ 77 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMT-------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 4456777888899999999999999999988 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----------------------------------hHHhhhhhhhhh
Q 011657 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL-----------------------------------GGYGIGSLLVDL 175 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~-----------------------------------~g~~~g~~l~~~ 175 (480)
.+++.++++++++++|++.++++|+++|+|.+. +||.+++.+.+.
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999886 677777777776
Q ss_pred hhhhHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHH---HHHHhC-CCCCCCChhhHHH---
Q 011657 176 VAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISC---LCRLRG-QSIGDSAPTEVDE--- 247 (480)
Q Consensus 176 ~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~--- 247 (480)
. +|||.|++...++++ ..+..+++||+|+ +++++.|..+........ ...... ....+........
T Consensus 158 ~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~~-----~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (495)
T PRK14995 158 F-YWGSVFLINVPIVLVVMGLTARYVPRQAG-----RRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLT 231 (495)
T ss_pred C-ChHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 5 999999998887776 4445556777642 111112222211111110 001111 1111111000000
Q ss_pred ------HHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHH
Q 011657 248 ------ILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLG 320 (480)
Q Consensus 248 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 320 (480)
.....+. +.+.+.-..++++++.+....+..+.... ......++.|.+++. .|. ++.+++....+..
T Consensus 232 ~~~~l~~f~~~e~-~~~~p~~~~~lf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lq~v~g~-s~~~ag~~~~~~~ 305 (495)
T PRK14995 232 GALLLGLFIRTQL-AASRPMIDMRLFTHRIILSGVVMAMTAMI----TLVGFELLMAQELQFVHGL-SPLEAGMFMLPVM 305 (495)
T ss_pred HHHHHHHHHHHHh-cCCCCCcCHHHhCCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 0000011 11122222467776655443333222222 223455677777776 466 8999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCCh
Q 011657 321 LFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPL 400 (480)
Q Consensus 321 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 400 (480)
++..++.++.|++.||+|+|+.+..+..+.+++.+++... ....+.+.......+.+.+.+... +.....+.+..|+
T Consensus 306 ~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~G~g~g~~~-~~~~~~~~~~~~~ 382 (495)
T PRK14995 306 VASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DFSTQQWQAWGLMALLGFSAASAL-LASTSAIMAAAPP 382 (495)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHhHHHHH-HHHHHHHHhcCCH
Confidence 9999999999999999999998888887777766655432 112223333333333333333333 3344677788999
Q ss_pred hhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 401 RLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 401 ~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
++++.+.++.++.+++|+.+|+.+.|.+.++
T Consensus 383 ~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 383 EKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988764
No 25
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.2e-30 Score=249.63 Aligned_cols=357 Identities=15% Similarity=0.085 Sum_probs=224.2
Q ss_pred HhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 011657 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (480)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 136 (480)
.++.......+...++..+|.+.+ .|++..+.+++.+.+.+++.++++++|+++||+|||++++++.++.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~p~l~~--------~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 34 IFFGYAAYYLVRKNFALAMPYLVE--------QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 334445555555556677777663 378999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC----chHHHHHHHHHHHHHHhH------------------------------hHHh-hhhhh---hhhhhh
Q 011657 137 GALVTALAP----DFIIMVVGRFVFGIGIGL------------------------------GGYG-IGSLL---VDLVAG 178 (480)
Q Consensus 137 ~~~~~~~~~----~~~~l~~~r~l~G~g~g~------------------------------~g~~-~g~~l---~~~~~~ 178 (480)
+.+++++++ +++.+++.|++.|++.+. +|.. .+.++ .....+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g 185 (452)
T PRK11273 106 VMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND 185 (452)
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc
Confidence 999888763 788899999999998876 2211 11111 112239
Q ss_pred hHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccc
Q 011657 179 WRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE 257 (480)
Q Consensus 179 wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (480)
||+.|++.+++.++ ..+..+++||+|+....+. .++..+ .... + .++.+.++.
T Consensus 186 w~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~-------~~~~-----~----~~~~~~~~~ 239 (452)
T PRK11273 186 WHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP----------IEEYKN-------DYPD-----D----YNEKHEQEL 239 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC----------hhhhhh-------cccc-----c----cccccCCCc
Confidence 99999998888776 4556667788875311000 000000 0000 0 000000000
Q ss_pred cccccH-HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 011657 258 DKEVSL-REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVE 335 (480)
Q Consensus 258 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 335 (480)
+.+..+ +.+++++..+...+...+... .......|.|.++++ .|+ +..+++.......++.+++.++.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~G~l~d 314 (452)
T PRK11273 240 TAKQIFMQYVLPNKLLWYIAIANVFVYL----LRYGILDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPGTLLCGWMSD 314 (452)
T ss_pred cHHHHHHHHHHcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111 124455544444333333222 223556688888876 466 7778888888899999999999999999
Q ss_pred hh--cCchHHH-hhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHH
Q 011657 336 RL--GRRPLLL-GGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVL 412 (480)
Q Consensus 336 ~~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 412 (480)
|+ +||.... ....+..++..++.. ....+.+........++.. ..+.......+..|.+|++.||++.|+.+.
T Consensus 315 r~~~~r~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 390 (452)
T PRK11273 315 KVFRGNRGATGVFFMTLVTIATIVYWL---NPAGNPTVDMACMIVIGFL-IYGPVMLIGLHALELAPKKAAGTAAGFTGL 390 (452)
T ss_pred HHccCCcchHHHHHHHHHHHHHHHHHH---hcccChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHcChhhhhhHHHHHHH
Confidence 99 4444322 222222222222211 1111222222222222221 111112222456799999999999999999
Q ss_pred HHHHHHHh-HhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 413 VNFGANAL-VTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 413 ~~~~g~~i-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
..++|+.+ +|.+.|.+.|+.|++..|++.+++++++.+....+.
T Consensus 391 ~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 391 FGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 98888765 799999999999999999988887777766655433
No 26
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.98 E-value=8.9e-31 Score=247.74 Aligned_cols=324 Identities=13% Similarity=0.055 Sum_probs=230.8
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCch
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF 147 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 147 (480)
....++..|.+.++ +|++..+.+++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++++++|+
T Consensus 19 ~~~~~~~~~~~~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~ 91 (377)
T TIGR00890 19 VYTWTLLAPPLGRY-------FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSL 91 (377)
T ss_pred HhhhhhHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHH
Confidence 33567788999888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhH-----------------------------hHHhhhhhhhh---hhhhhHHHHhchhHHHHHHHH
Q 011657 148 IIMVVGRFVFGIGIGL-----------------------------GGYGIGSLLVD---LVAGWRYMYGASTPLAVIMGM 195 (480)
Q Consensus 148 ~~l~~~r~l~G~g~g~-----------------------------~g~~~g~~l~~---~~~~wr~~f~~~~~~~~~~~~ 195 (480)
+.++++|+++|++.+. +|..+++.+.. ...+||+.|++.++++++..+
T Consensus 92 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 92 AALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999875 22222222211 123899999999988877544
Q ss_pred H-HhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhH
Q 011657 196 G-MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 274 (480)
Q Consensus 196 ~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (480)
. .++++|+|+... ++ +. +.+.++...++.++++..+.
T Consensus 172 ~~~~~~~~~~~~~~-~~------------------------~~-----------------~~~~~~~~~~~~~~~~~~~~ 209 (377)
T TIGR00890 172 LGAFLIGYPPGQLI-KT------------------------NI-----------------EVSVKDYTVWEMLRTPQFWV 209 (377)
T ss_pred HHHHheecCchhcc-cc------------------------Cc-----------------ccchhhhhHHHHHcCccHHH
Confidence 4 444554432000 00 00 00001123445566655544
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHH
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISL 354 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 354 (480)
..+......+. ......+.+.+.++.+. +..+.+.......++.++++++.+++.||++||+.+..+..+..++.
T Consensus 210 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 210 LYLSFFLNAVS----GLLLIGLYKPYGQSLGL-SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHhHH----HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 43332222221 12233344556677777 77788889999999999999999999999999999888877777766
Q ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCc
Q 011657 355 FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGA 434 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~ 434 (480)
+++... .............+..... ....+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+..|+
T Consensus 285 ~~~~~~---~~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 360 (377)
T TIGR00890 285 AAMLFI---PMLNDVLFLATVALVFFTW-GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGF 360 (377)
T ss_pred HHHHHc---ccchhHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 654431 1111112212222222222 223344456888999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHH
Q 011657 435 GILFYAFGVIAVLSL 449 (480)
Q Consensus 435 ~~~~~~~~~~~~~~~ 449 (480)
+..|.+.+++.+++.
T Consensus 361 ~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 361 EYTFIVTGAFALTSL 375 (377)
T ss_pred hhHHHHHHHHHHHhc
Confidence 999888887776654
No 27
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=1.1e-29 Score=243.28 Aligned_cols=349 Identities=17% Similarity=0.155 Sum_probs=221.7
Q ss_pred HHHHhhhhhcccccccccccccccc-cCCCCCCCccccCChhHHHHHH-----HHHHHHHHHHHHHHHHHHhhhhhhHHH
Q 011657 54 FLFPALGGLLYGYDIGSTSCATISI-ESPTLSGISWYDLSSVEIGLIT-----SGSLYGALIGSILAFNIADILGRRREL 127 (480)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (480)
+....++.+++++|...++.+.|.+ .++... +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFP-----QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 3445678889999999888877643 333110 34444 34443 455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHhH------------------------------hHHhhh
Q 011657 128 ILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGL------------------------------GGYGIG 169 (480)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~g~g~------------------------------~g~~~g 169 (480)
.++.++++++++++++++|+. .++++|+++|++.|+ +|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588899999999987 444444
Q ss_pred hhhhh-----------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCC
Q 011657 170 SLLVD-----------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIG 238 (480)
Q Consensus 170 ~~l~~-----------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (480)
..+.. ...+||++|++.+++.++........||+|+|...+++. +
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~---------~--------------- 233 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQ---------A--------------- 233 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhc---------c---------------
Confidence 32221 124999999998887766555556688988754322100 0
Q ss_pred CCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHH
Q 011657 239 DSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSI 317 (480)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 317 (480)
+.+++....+.++++++.+.... .... ......+....|.|.+.+ ..|. +.........
T Consensus 234 ----------------~~~~~~~~~~~l~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~y~~~~~g~-s~~~~~~~~~ 293 (438)
T PRK09952 234 ----------------AAKKRIPVIEALLRHPGAFLKII--ALRL-CELLTMYIVTAFALNYSTQNLGL-PRELFLNIGL 293 (438)
T ss_pred ----------------cccccCCHHHHHHHchHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHH
Confidence 00000011122344433322221 1111 122223344556666654 4566 5554445555
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeeccc
Q 011657 318 LLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEV 397 (480)
Q Consensus 318 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
..++..+++.++.|+++||+|||+.+..+.++..++...+.... ...+....+....+..+.......+..+++..|.
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~ 371 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMAL--EAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEM 371 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777888899999999999999988877665544433222211 1122222222222222222222234456888999
Q ss_pred CChhhhhhHHHHHHHHH-HHHHHhHhhcchhhHHhh--CccHHHHHHHHHHHHHHHhcCC
Q 011657 398 FPLRLRGRGLSVAVLVN-FGANALVTFAFSPLKDLL--GAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 398 ~p~~~~~~~~~~~~~~~-~~g~~i~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
+|++.|+++.++.+... .+++.++|.+.+.+.+.. +|...+...+++.+++.+..+.
T Consensus 372 ~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 372 FGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred CCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999977664 489999999999998854 3566677667777776666544
No 28
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.98 E-value=1.4e-30 Score=242.17 Aligned_cols=316 Identities=14% Similarity=0.074 Sum_probs=212.6
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHH
Q 011657 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (480)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (480)
.+++.+|.+.+| +|++..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+....++|++.
T Consensus 9 ~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 9 TFSPVLSLVAED-------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred HHHhhHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 567888999888 9999999999999999999999999999999999999877666555555443344489999
Q ss_pred HHHHHHHHHHHHhH---------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHH-HHH
Q 011657 150 MVVGRFVFGIGIGL---------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGM 195 (480)
Q Consensus 150 l~~~r~l~G~g~g~---------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~-~~~ 195 (480)
++++|+++|++.+. +++.+++.+.+.. +||+.|++.++++++ ..+
T Consensus 82 l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHH
Confidence 99999999999875 4555555555544 999999998888776 455
Q ss_pred HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 196 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 196 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
.++++||+|++..+ . .+ .++ ....++++++++..+..
T Consensus 161 ~~~~lp~~p~~~~~--------------------------~----~~--~~~-----------~~~~~~~ll~~~~~~~~ 197 (368)
T TIGR00903 161 VLAALPALPFQAAE--------------------------G----FG--FKD-----------AVKEFGALAGRKDLWII 197 (368)
T ss_pred HHHHcCCCCCCCCC--------------------------C----cc--hHH-----------HHHHHHHHHcChhHHHH
Confidence 56678998752100 0 00 000 00135677777766555
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc---hHHHh-hhHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR---PLLLG-GVSGIV 351 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---~~~~~-~~~~~~ 351 (480)
.+..++. ...+..+..|.|.++++.|+ +.. .+.......+.+.++ .++++||..|| +.... ...+.+
T Consensus 198 ~~~~~~~----~~~~~~~~~wlp~~L~~~g~-s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a 268 (368)
T TIGR00903 198 GAILGFG----VALFDNLAIWLEAALRPAGL-EDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIA 268 (368)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHCCC-ChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHH
Confidence 4433333 33344667899999988887 543 555555555555544 57788887653 33222 222223
Q ss_pred HHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 352 ISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
+.+..+.. ..+....+....+ .+++.....+..+++.+|.+|++.|+++.|+.+..+++++..+|.+.+.+..
T Consensus 269 ~~~~~~~~-----~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~- 341 (368)
T TIGR00903 269 AFFLALAF-----ELNRLALFAFIGI-AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS- 341 (368)
T ss_pred HHHHHHHH-----ccccHHHHHHHHH-HHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-
Confidence 22222221 1222222222222 2222333334556889999999999999999999999999999999987774
Q ss_pred hCccHHHHHHHHHHHHHHHhcC
Q 011657 432 LGAGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 432 ~g~~~~~~~~~~~~~~~~~~~~ 453 (480)
|....|.++++..+++.+..+
T Consensus 342 -~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 342 -SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred -CHHHHHHHHHHHHHHHHHHHH
Confidence 666778888887777777654
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=99.98 E-value=6.6e-30 Score=245.10 Aligned_cols=325 Identities=18% Similarity=0.241 Sum_probs=209.8
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHH-HHH-----HHHHHHHHHHHHHHHhhhhhhHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLIT-SGS-----LYGALIGSILAFNIADILGRRRE 126 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~-----~~~~~~~~~~~g~l~dr~Grr~~ 126 (480)
+.....++.+++.+|...++...|.+.+| ++.++.+.+.+. +.. .++..+++++.|+++||+|||++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKT-------FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 35566788999999999999999999988 887777655433 322 23335789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHhH----------------------------------h
Q 011657 127 LILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGL----------------------------------G 164 (480)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~g~g~----------------------------------~ 164 (480)
++.+.+++++++++++++++++ .++++|+++|++.+. +
T Consensus 89 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 468899999998775 2
Q ss_pred HHhhhhhhhh-------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCC
Q 011657 165 GYGIGSLLVD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 237 (480)
Q Consensus 165 g~~~g~~l~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (480)
|+.+|+.+.. ...+||++|++..+...+........||++++..+++
T Consensus 169 g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-------------------------- 222 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH-------------------------- 222 (434)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh--------------------------
Confidence 4444444421 2349999999765443322222223444432110000
Q ss_pred CCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHH
Q 011657 238 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 316 (480)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 316 (480)
+.+.+..+++..+++ +..+...+..+.....+.....|.|.++++ .|+ +..+.++..
T Consensus 223 ------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~-~~~~~~~~~ 280 (434)
T PRK15075 223 ------------------RPSMREIFRSLAANW---RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHL-SAADSLLVT 280 (434)
T ss_pred ------------------ccccccHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHH
Confidence 000011122222222 222221222222233345677788888876 577 777888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHH-HHHHHHHHhcccccccceeec
Q 011657 317 ILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVA-LLLYVGCYQLSFGPIGWLMIS 395 (480)
Q Consensus 317 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 395 (480)
....++.+++.++.|+++||+|||+.+..+..+..+....... ... .......... ..+...+.+ ...+..+.+..
T Consensus 281 ~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~ 357 (434)
T PRK15075 281 LCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS-WLV-AAPSFARMLAVELWLSFLYG-SYNGAMVVALT 357 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH-HHH-cCCchHHHHHHHHHHHHHHH-HHHhhHHHHHH
Confidence 8899999999999999999999999877654443322111111 111 1122211211 122222222 22334446789
Q ss_pred ccCChhhhhhHHHHHHHHHHH-HHHhHhhcchhhHHhhCcc
Q 011657 396 EVFPLRLRGRGLSVAVLVNFG-ANALVTFAFSPLKDLLGAG 435 (480)
Q Consensus 396 ~~~p~~~~~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~g~~ 435 (480)
|.+|++.|+++.++.+.+... ++.++|.+.|.+.|..|+.
T Consensus 358 e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 358 EVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 999999999999997666554 5888999999999998864
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=8.4e-30 Score=240.43 Aligned_cols=332 Identities=14% Similarity=0.177 Sum_probs=226.1
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
.++.+..+.......+.+|.+.+| +|.+..+.+++.+.+.+++.++++++|+++||+|||+++.++.++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGVLTELAHD-------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred HHHHHHHHhhHHHHHhChHHHHHH-------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 445566677777888899999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHH
Q 011657 138 ALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMY 183 (480)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f 183 (480)
.+++++++|++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f 160 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRYTF 160 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHHHH
Confidence 99999999999999999999998775 3455555555544 899999
Q ss_pred hchhHHHHHHH-HHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccccccc
Q 011657 184 GASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 262 (480)
Q Consensus 184 ~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (480)
++.+++.++.. ...+++||.++ +. +.+.+ .
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~----~~--------------------------------------------~~~~~-~ 191 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD----EA--------------------------------------------KGGLR-E 191 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc----cc--------------------------------------------ccCHH-H
Confidence 99988877643 34455777531 00 00000 0
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 263 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
..+.++++..+.......+.. ...+....+..|++.+..|. ++.+.++......++.+++.++.+++.||+++|+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~ 267 (382)
T PRK10091 192 QFHFLRSPAPWLIFAATMFGN---AGVFAWFSYIKPYMMFISGF-SETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI 267 (382)
T ss_pred HHHHhcChHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH
Confidence 112233333332222211111 11111222233444445677 88899999999999999999999999999999998
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
+..+..+..++.+++... .+..+.......+...+......+.......+..|.+.++.+ ..+....+|.+++|
T Consensus 268 ~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp 341 (382)
T PRK10091 268 AAVTDFIIVLALLMLFFF----GGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGA 341 (382)
T ss_pred HHHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHH
Confidence 888777766666544321 122233233222332222222222222344444555555544 44677899999999
Q ss_pred hcchhhHHh-hCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 423 FAFSPLKDL-LGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 423 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
.+.|.+.|. .+|+..+.+.++++++.........
T Consensus 342 ~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 342 YCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 999999995 6788888887766665555544433
No 31
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=1.3e-29 Score=244.97 Aligned_cols=335 Identities=16% Similarity=0.109 Sum_probs=212.0
Q ss_pred ccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Q 011657 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (480)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 143 (480)
..++.....+.+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++
T Consensus 48 ~~~~~~~~~~~~~~l~~~-------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 120 (476)
T PLN00028 48 CFVSTFAAAPLLPIIRDN-------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL 120 (476)
T ss_pred HHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 333444567788888887 9999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHhH-----------------------------hHHhhhhhhh----h----h----hhhhHHH
Q 011657 144 APDFIIMVVGRFVFGIGIGL-----------------------------GGYGIGSLLV----D----L----VAGWRYM 182 (480)
Q Consensus 144 ~~~~~~l~~~r~l~G~g~g~-----------------------------~g~~~g~~l~----~----~----~~~wr~~ 182 (480)
+++++.+++.|+++|++.+. +|..++..+. . . ..+||+.
T Consensus 121 ~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 121 VSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred hcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 99999999999999998875 2222222211 1 1 1389999
Q ss_pred HhchhHHHHHHHHHHhcccC-chHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc
Q 011657 183 YGASTPLAVIMGMGMWWLPA-SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 261 (480)
Q Consensus 183 f~~~~~~~~~~~~~~~~~~e-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (480)
|++.++++++..+..+++++ .|+. ..++.. ++.+.++.+...
T Consensus 201 f~i~g~l~l~~~l~~~~~~~~~p~~--------------~~~~~~-----------------------~~~~~~~~~~~~ 243 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLGQDLPDG--------------NYRELK-----------------------KSGTMPKDSFSK 243 (476)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCC--------------chhhHH-----------------------hcCccccccHHH
Confidence 99999988875555555443 3310 000000 000000000111
Q ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 011657 262 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 340 (480)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 340 (480)
.+++.++++..+...+..... ......+..+.|.++. +.|+ +..+++.......++.++++++.|+++||++||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~g~-s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 244 VLRYGVTNYRTWILALTYGYS----FGVELTMDNIIAEYFYDRFGL-SLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHcCchhHHHHHHHHHH----HHHHHHHHhHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 234445555444333322221 1112234455666654 4577 888899999999999999999999999999865
Q ss_pred h-------HHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHH
Q 011657 341 P-------LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV 413 (480)
Q Consensus 341 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 413 (480)
+ .......+.++.++++. ...+........+++..+.... .+..+.+..+..| +.+|++.|+.+..
T Consensus 319 ~~~~~r~~~~~~~~~l~~i~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~ 391 (476)
T PLN00028 319 FGMRGRLWALWIVQTLGGVFCIWLG-----RANSLGAAIVVMILFSIFVQAA-CGATFGIVPFVSR-RSLGVISGLTGAG 391 (476)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHHHHHHHHHHh-hhhhcccCcccCh-hhchhhhhhhhcc
Confidence 2 11122221111111111 1222222222222332222222 2234456666655 7899999999888
Q ss_pred HHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCC
Q 011657 414 NFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 414 ~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
+++|+++++.+.+ ..+..+|...|++.+++.+++.++.++.
T Consensus 392 g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 392 GNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred ccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 8888888777654 1123457788888887777777665544
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=8.1e-30 Score=243.02 Aligned_cols=354 Identities=18% Similarity=0.197 Sum_probs=238.0
Q ss_pred hcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 011657 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 141 (480)
+...+|...++...|.+.++ +|.+..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQED-------LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHh-------hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 34445667788888888877 99999999999999999999999999999999999999999999999999999
Q ss_pred HhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchh
Q 011657 142 ALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGAST 187 (480)
Q Consensus 142 ~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~ 187 (480)
++++|++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.+
T Consensus 77 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~ 155 (399)
T TIGR00893 77 AFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEG 155 (399)
T ss_pred HHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHH
Confidence 9999999999999999999886 4444444444444 8999999998
Q ss_pred HHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHH
Q 011657 188 PLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 266 (480)
Q Consensus 188 ~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (480)
++.++..+ ..++.||+|+.. +.. .+++.....+....+. +.+.+++......++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 211 (399)
T TIGR00893 156 VLGIIWGVLWLKFIPDPPQKA-------KWL---TEEEKYIVVGGLLAEQ--------------QGKGPSTPKKYQIKEL 211 (399)
T ss_pred HHHHHHHHHhhheecCCCCcc-------ccC---CHHHHhhcchhhcccc--------------ccccccCCCccchHHH
Confidence 88777444 444566654210 000 0000000000000000 0001112233445667
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHH-
Q 011657 267 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL- 344 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~- 344 (480)
++++..+...+...+.. ........+.|.++++ .+. +..+.+.......++.+++.++.+++.||++||+...
T Consensus 212 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 286 (399)
T TIGR00893 212 LKDRRVWGLALGQFLVN----IGLGFFLTWFPTYLVQERGL-SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLV 286 (399)
T ss_pred hcCHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHhcc-cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Confidence 77665544433333222 2334556667777655 566 7788899999999999999999999999999886211
Q ss_pred hhhHHHHHHHHHHHHH-hhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 345 GGVSGIVISLFLLGSY-YLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 345 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
.......++.+..... .................... ...+..+..+++..|.+|++.|+++.|+.+.+.++|+.++|.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 365 (399)
T TIGR00893 287 FARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGF-FGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPI 365 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH-hchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhH
Confidence 1111111111111110 11111112222222222222 222356677789999999999999999999999999999999
Q ss_pred cchhhHHhhC-ccHHHHHHHHHHHHHHHhcC
Q 011657 424 AFSPLKDLLG-AGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 424 ~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 453 (480)
+.|.+.+..| +...+++.+++.+++.+..+
T Consensus 366 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 366 VIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 9999999988 88888888877777665543
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=2.5e-29 Score=239.22 Aligned_cols=323 Identities=20% Similarity=0.196 Sum_probs=221.9
Q ss_pred hhhccccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 011657 60 GGLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~ 138 (480)
..++...+..+..+.+|. +.++ +|.+..+.|++.+++.+++.+++++.|+++||+|||++++.+.++++++.
T Consensus 23 ~~~~~~~~~~~~~~~l~~~i~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (399)
T PRK05122 23 FTFISYLTIGLPLAVLPGYVHDQ-------LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSG 95 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHH
Confidence 334555566677777886 4555 89999999999999999999999999999999999999999999998887
Q ss_pred HHHHhc---C-----chHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhh
Q 011657 139 LVTALA---P-----DFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLV 176 (480)
Q Consensus 139 ~~~~~~---~-----~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~ 176 (480)
+.+.++ + +++.+++.|+++|++.+. +|+.+++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 175 (399)
T PRK05122 96 LLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG 175 (399)
T ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 766553 2 567899999999999887 4566666666555
Q ss_pred hhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccc
Q 011657 177 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVG 256 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (480)
+||+.+++..+..++..+.....|++++ +
T Consensus 176 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~ 204 (399)
T PRK05122 176 -GLAGLGLLIMLLALLGLLLARPRPAVPP--------------------------------------------------V 204 (399)
T ss_pred -cHHHHHHHHHHHHHHHHHHHhcCCCCCC--------------------------------------------------C
Confidence 8999888776665543333322232210 0
Q ss_pred ccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 257 EDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER 336 (480)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 336 (480)
++++.+.++.++.. +.......+..+ .+.....+.+.+..+.+. .+.+.......++.+++.++.+++.||
T Consensus 205 ~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~~r 275 (399)
T PRK05122 205 KGERLPFRRVLGRV--WPYGMGLALASI----GFGTIATFITLYYAARGW---DGAALALTLFGVAFVGARLLFGNLINR 275 (399)
T ss_pred CccchhHHHHHHHH--HHHHHHHHHHHH----HHHHHHHHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001122222211 111111111111 122344556666666655 345666778888899999999999999
Q ss_pred hcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHH
Q 011657 337 LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFG 416 (480)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 416 (480)
+++|+.+..+..+..++..++.. .++.+..+....+.+.+.+. ..+.......|..|+++|+++.|+.+....+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (399)
T PRK05122 276 LGGLRVAIVSLLVEILGLLLLWL-----APSPWMALIGAALTGFGFSL-VFPALGVEAVKRVPPQNRGAALGAYSVFLDL 349 (399)
T ss_pred hccHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999888877777766655543 12333333333333333332 2344445667889999999999999999999
Q ss_pred HHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCC
Q 011657 417 ANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 417 g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
|..+++.+.|.+.+..|++..+++.+++.+++.+..+.+
T Consensus 350 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 350 SLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998888877777665543
No 34
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=2e-28 Score=238.17 Aligned_cols=355 Identities=19% Similarity=0.217 Sum_probs=236.0
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
+++.++..++...+++.+|.+.++ +|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 16 AFGFFMQSLDTTIVNTALPSMAQS-------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 455577777888888899999987 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHH
Q 011657 138 ALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMY 183 (480)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f 183 (480)
.++++++++++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHHH
Confidence 99999999999999999999999876 5666666666655 999999
Q ss_pred hchhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHH---HhCCCCCCCChhhHHHH----------H
Q 011657 184 GASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCR---LRGQSIGDSAPTEVDEI----------L 249 (480)
Q Consensus 184 ~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~ 249 (480)
++..+...+..+ .....|+.+. ..++.+..+........... ..+.+............ .
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM------QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLY 241 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc------cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHH
Confidence 998877666433 3334454321 00111111111111111100 01111100011000000 0
Q ss_pred HhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHH
Q 011657 250 TELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTG 328 (480)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 328 (480)
...+....++..+ .++++++.++..+...++..+ .......+.|++++. .|. ++.+.++......++.+++.+
T Consensus 242 ~~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~ 315 (471)
T PRK10504 242 LLHARNNNRALFS-LKLFRTRTFSLGLAGSFAGRI----GSGMLPFMTPVFLQIGLGF-SPFHAGLMMIPMVLGSMGMKR 315 (471)
T ss_pred HHHHhcCCCCccC-HHHhcccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 0001111111222 246777765554443333322 233555677888775 677 788899999989999999999
Q ss_pred HHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHH
Q 011657 329 LAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLS 408 (480)
Q Consensus 329 ~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 408 (480)
+.+++.||+|+|+++..+..+..+...++... ....+.+.......+.+.+.+... +....+..+..|++.++.+.|
T Consensus 316 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 392 (471)
T PRK10504 316 IVVQVVNRFGYRRVLVATTLGLALVSLLFMLV--ALLGWYYLLPFVLFLQGMVNSTRF-SSMNTLTLKDLPDNLASSGNS 392 (471)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc--cccccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCHHhccchHH
Confidence 99999999999999988877776665554431 111111212222222222222222 344467778899999999999
Q ss_pred HHHHHHHHHHHhHhhcchhhHHhhCcc
Q 011657 409 VAVLVNFGANALVTFAFSPLKDLLGAG 435 (480)
Q Consensus 409 ~~~~~~~~g~~i~~~~~~~~~~~~g~~ 435 (480)
+.++...+|..+++.+.|.+.+..|+.
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999998877653
No 35
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=1.5e-29 Score=243.35 Aligned_cols=342 Identities=14% Similarity=0.155 Sum_probs=223.1
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCch
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF 147 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 147 (480)
...++...|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++++++++++++
T Consensus 35 ~~~~~~~~~~i~~~-------~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 107 (455)
T TIGR00892 35 PKAVTVFFKELQQI-------FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNV 107 (455)
T ss_pred hcchhhhHHHHHHH-------hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhH
Confidence 34567778888877 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHhH---------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHH
Q 011657 148 IIMVV-GRFVFGIGIGL---------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIM 193 (480)
Q Consensus 148 ~~l~~-~r~l~G~g~g~---------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~ 193 (480)
+.+++ .|+++|++.+. +++.+++.+.+.. +||+.|++.+++.++.
T Consensus 108 ~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 108 IELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHC 186 (455)
T ss_pred HHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 98875 57999988775 4555555555555 9999999999887764
Q ss_pred HHHHhcc-cCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhh
Q 011657 194 GMGMWWL-PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 272 (480)
Q Consensus 194 ~~~~~~~-~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (480)
.+..+++ ++.+... +. + ++.. .+.+.+.. ..+... . ...++..+....+.++++.+
T Consensus 187 ~v~~~~~~~~~~~~~--~~--~--------~~~~------~~~~~~~~-~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 243 (455)
T TIGR00892 187 CVCGALMRPVGPSQR--VS--K--------SKSK------EGLPPDGS-TKKLSK---K-STAEKINRFLDFSLFTHRGF 243 (455)
T ss_pred HHHHHHhCCCCcccc--cc--c--------cccc------ccCCCCCc-cccccc---c-chhhhhhhhcchHHhcCchH
Confidence 4444333 3221100 00 0 0000 00000000 000000 0 00000001111245566555
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh--cCchHHHhhh--H
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL--GRRPLLLGGV--S 348 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~--~ 348 (480)
+.......+... .......+.+.+.++.|. +..+++...+..+++.++++++.+++.||. ++|+....+. .
T Consensus 244 ~~~~~~~~l~~~----~~~~~~~~l~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 318 (455)
T TIGR00892 244 LVYLSGNVIMFL----GFFAPIIFLVPYAKDKGV-DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL 318 (455)
T ss_pred HHHHHHHHHHHH----HccchHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence 443333222222 222344566777788888 888999999999999999999999999973 3333333322 2
Q ss_pred HHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhh
Q 011657 349 GIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPL 428 (480)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 428 (480)
+.+++.+++.. ..+.+..++..++.+ .......+...+++.|.+|+++++++.|+++....+|.+++|.+.|.+
T Consensus 319 ~~~l~~ll~~~-----~~~~~~~~i~~~~~G-~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 392 (455)
T TIGR00892 319 FNGLTHLLCAL-----AGDYTGLVIYCIFFG-LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHH-----hchHHHHHHHHHHHH-HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeee
Confidence 22222222211 123333333333333 333334455667888999999999999999999999999999999999
Q ss_pred HHhhC-ccHHHHHHHHHHHHHHHh
Q 011657 429 KDLLG-AGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 429 ~~~~g-~~~~~~~~~~~~~~~~~~ 451 (480)
.+..| |...|++.+++.+++.+.
T Consensus 393 ~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 393 VDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred ehhcCCcchHHHHhhHHHHHHHHH
Confidence 99875 888888877766665543
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=4.4e-29 Score=237.91 Aligned_cols=343 Identities=15% Similarity=0.083 Sum_probs=236.4
Q ss_pred hhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Q 011657 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (480)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (480)
+..++..+.+.+..+...++...+.+.+|.+.++ +|.+..+.++..+.+.+++.+++++.|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 81 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVED-------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM 81 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 4556666677777777777888888889998887 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhh
Q 011657 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLV 173 (480)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~ 173 (480)
.++.++.+++.+++.++++++.+++.|+++|++.+. +|+.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 82 LAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988765 4444555554
Q ss_pred hhhhhhHHHHhchhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhh
Q 011657 174 DLVAGWRYMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 252 (480)
Q Consensus 174 ~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (480)
+.. +||+.|++.++..++..+ ..+..||+++.. + + +..
T Consensus 162 ~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~------------------~~~-------- 200 (406)
T PRK15402 162 HVL-PWRGMFVLFAALAALSFFGLWRAMPETAGRV---G-----------E------------------KLS-------- 200 (406)
T ss_pred Hcc-CccHHHHHHHHHHHHHHHHHHHhCCCCCccc---c-----------c------------------ccc--------
Confidence 544 999999998888776444 344567663210 0 0 000
Q ss_pred hcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 011657 253 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAV 331 (480)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 331 (480)
.++....++++++++..+...+...+.... ......+.|.++ +..+. ++.+.+.......++.+++.++.+
T Consensus 201 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~-~~~~~g~~~~~~~~~~~~g~~~~g 272 (406)
T PRK15402 201 ---LKELGRDYKLVLKNRRFVAGALALGLVSLP----LLAWIALSPVILISGEQL-SSYEYGLLQVPVFGALIAGNLTLA 272 (406)
T ss_pred ---HHHHHHHHHHHHcCcHHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000112345566666555443333222221 123334456554 44677 777788877778888899999999
Q ss_pred HHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHH
Q 011657 332 LVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAV 411 (480)
Q Consensus 332 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 411 (480)
++.||+++|+.+..+..+..++..++...........++......+...+.+... +......... +++++++..++.+
T Consensus 273 ~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~-~~~~~~~~~~-~~~~~g~~~~~~~ 350 (406)
T PRK15402 273 RLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN-AGLYRLTLFS-SDVSKGTVSAAMG 350 (406)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh-hhHHHHHhhh-ccccccHHHHHHH
Confidence 9999999999988887777766666554321112222233333333333333222 2322333333 3488999999999
Q ss_pred HHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHH
Q 011657 412 LVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLS 448 (480)
Q Consensus 412 ~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 448 (480)
..+.++..+++.+.+.+.+..+.....+..++..++.
T Consensus 351 ~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 351 MLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 9999999999999999988877654444433333333
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=2.4e-28 Score=230.81 Aligned_cols=313 Identities=19% Similarity=0.206 Sum_probs=219.5
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHH
Q 011657 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (480)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (480)
...+.+|.+.++ +|.++.+.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.
T Consensus 38 ~~~~~l~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (394)
T PRK10213 38 LPVSLLTPMAQD-------LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSL 110 (394)
T ss_pred HHHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHH
Confidence 445567788777 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHH
Q 011657 150 MVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 195 (480)
Q Consensus 150 l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~ 195 (480)
+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.++++++..+
T Consensus 111 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 111 LLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHH
Confidence 99999999999886 6667777666665 999999998877766433
Q ss_pred H-HhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhH
Q 011657 196 G-MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 274 (480)
Q Consensus 196 ~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (480)
. ....||+|+. +++...+.++.++++..+.
T Consensus 190 ~~~~~~p~~~~~-------------------------------------------------~~~~~~~~~~~l~~~~~~~ 220 (394)
T PRK10213 190 WIIKSLPSLPGE-------------------------------------------------PSHQKQNTFRLLQRPGVMA 220 (394)
T ss_pred HHHHHCCCCCcc-------------------------------------------------cccchhHHHHHhcCHHHHH
Confidence 3 3345664310 0001112345566665554
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHH-
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS- 353 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~- 353 (480)
..+...+.+... .....+..|.+.++.|+ +..+.+......+++.+++.++.+++.||.+ |+.+..+..+..+.
T Consensus 221 ~~~~~~~~~~~~---~~~~~~~~p~~~~~~g~-s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~ 295 (394)
T PRK10213 221 GMIAIFMSFAGQ---FAFFTYIRPVYMNLAGF-GVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHH
Confidence 433322222221 11233345777777888 7888899999999999999999999999954 44433333332222
Q ss_pred HHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC
Q 011657 354 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG 433 (480)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g 433 (480)
+.+... .++.+.......+.+.+.. ...+...+++.+..| +.++...++.....++|..+|+.+.|.+.|..|
T Consensus 296 ~~l~~~-----~~~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g 368 (394)
T PRK10213 296 LVLTLW-----GSDKIVATGVAIIWGLTFA-LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG 368 (394)
T ss_pred HHHHHH-----hhhHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 232221 2233333333333333333 333444456777777 556777788888889999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHh
Q 011657 434 AGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~ 451 (480)
+...+...+.+.++..+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 369 LTSPLMLSGTLMLLTALL 386 (394)
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 887777766655544443
No 38
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=2.8e-28 Score=239.47 Aligned_cols=362 Identities=20% Similarity=0.200 Sum_probs=251.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
++.+.....+..+++++|..+|++++|+++||+|||++++.++++..++.+++++++|++.+++.|+++|++.++
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 777889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ------------------------hHHhhh-hhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCch
Q 011657 164 ------------------------GGYGIG-SLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDM 218 (480)
Q Consensus 164 ------------------------~g~~~g-~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~ 218 (480)
.++.++ ...+....+||+.+++..+++++.++.+++.||+|||+..++
T Consensus 193 ~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g------- 265 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG------- 265 (521)
T ss_pred HhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC-------
Confidence 111111 111123348999999999999987777777789999999988
Q ss_pred hhhHHHHHHHHHHHhCCCCCCCCh-hhHHHH--HHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHH
Q 011657 219 QDLRESAISCLCRLRGQSIGDSAP-TEVDEI--LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLY 295 (480)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
+.+++.+.+++..+.+...... ...+.. .........+++..+.++++.+..+...+...+.++.. ...+
T Consensus 266 --~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-----~~~y 338 (521)
T KOG0255|consen 266 --RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-----SLVY 338 (521)
T ss_pred --chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-----hHHH
Confidence 7788888888876544222111 111111 11111112233456888888875554444443333221 1122
Q ss_pred hH-HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHH
Q 011657 296 YA-ASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVA 374 (480)
Q Consensus 296 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (480)
+. +......|. .........+.....+....+...|+.|||.....+..+..++++..++... ....+.....
T Consensus 339 ~gl~~~~~~lg~----~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 412 (521)
T KOG0255|consen 339 YGLSLNVSGLGG----NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPD--DLGGWLHWIL 412 (521)
T ss_pred HhhhhhhhhcCc----hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhc--cchhHHHHHH
Confidence 22 122222332 4555566666688888888899999999999999999998888888765422 1111123333
Q ss_pred HHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 375 LLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
..+..++...++... +.+..|++|+..|..+.+.......++++++|.+...... ......+.+++.+..+...+...
T Consensus 413 ~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 490 (521)
T KOG0255|consen 413 PLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLL 490 (521)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHh
Confidence 333344444444434 6899999999999999999999999999999987644433 33333334456666666666666
Q ss_pred CCCCCCCChhhhhhhhhc
Q 011657 455 XXXXXXXSFQRQRGLRLR 472 (480)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~ 472 (480)
+.||++++...+...+.+
T Consensus 491 ~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 491 LLPETKGKPLPGTLLDAE 508 (521)
T ss_pred cCcccCCCCCchhHHHHH
Confidence 789999887655444433
No 39
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=2.4e-29 Score=238.41 Aligned_cols=329 Identities=15% Similarity=0.116 Sum_probs=228.8
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
.++.++.+.+....++.+|.+.++ +|++..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++
T Consensus 13 ~~~~~~~~~~~~~~g~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 13 FLSYALTGALVIVTGMVMGPIAEY-------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 556677777888899999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHH
Q 011657 138 ALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMY 183 (480)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f 183 (480)
.++++++++++.+++.|+++|++.+. +++.+.+.+.....+||+.|
T Consensus 86 ~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f 165 (394)
T PRK03699 86 VAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVY 165 (394)
T ss_pred HHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 99999999999999999999998876 22333333333334899999
Q ss_pred hchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccH
Q 011657 184 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 263 (480)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (480)
++.+++.++..+..++ .+.|+.. +++ + ++ ++...
T Consensus 166 ~~~~~~~~~~~~~~~~-~~~p~~~-~~~-----------~------------~~-----------------~~~~~---- 199 (394)
T PRK03699 166 ACIGLVYVAIFILTLF-SEFPALG-KHA-----------P------------KA-----------------DKPVA---- 199 (394)
T ss_pred HHHHHHHHHHHHHHHh-cCCcccc-ccC-----------c------------cc-----------------cCccc----
Confidence 9888877665443332 2222100 000 0 00 00000
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 264 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
++.+ ++..+...+.. +........+..|.|.++++ .|. +..+.+...+...++..+++++.++++||+++|+.
T Consensus 200 ~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 273 (394)
T PRK03699 200 KEKW-GIGVLFLAIAA----LLYILAQLTFISWVPEYAQKKFGM-SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI 273 (394)
T ss_pred cccC-ChHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCC-ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Confidence 0000 11111111111 22222233556788888854 577 88889999999999999999999999999999998
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
+.....+..+.+.++.. ..+........+..+ .......+...++..|..| +.++...+.......+|..++|
T Consensus 274 l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p 346 (394)
T PRK03699 274 LTVLAGLALVLMYLFVN-----TDDPSHLLYAILGLG-FFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTF 346 (394)
T ss_pred HHHHHHHHHHHHHHHHH-----cCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHH
Confidence 87766555554443322 122223222223332 2222333444456667666 4467788899999999999999
Q ss_pred hcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 423 FAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 423 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
.+.|.+.+..|++..+++.+++.+++.+..
T Consensus 347 ~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 347 VVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 999999999999988888877776665543
No 40
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=1.2e-29 Score=242.53 Aligned_cols=343 Identities=15% Similarity=0.113 Sum_probs=241.4
Q ss_pred cccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh---
Q 011657 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL--- 143 (480)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~--- 143 (480)
......+.+|.+.++ ++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 32 ~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 32 GLGLLGVAVPVQIQM-------MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 344566677777766 7889999999999999999999999999999999999999988888877665542
Q ss_pred --cCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchh
Q 011657 144 --APDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGAST 187 (480)
Q Consensus 144 --~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~ 187 (480)
.++++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.+
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~ 183 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAA 183 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHH
Confidence 57889999999999988765 5666666665554 8999999888
Q ss_pred HHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHh
Q 011657 188 PLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF 267 (480)
Q Consensus 188 ~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (480)
+..++..+..+.+||+++.. . + . +.. .++....++..+
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~---~-----~--------------------~---~~~-----------~~~~~~~~~~~~ 221 (417)
T PRK10489 184 AGTFITLLPLLRLPALPPPP---Q-----P--------------------R---EHP-----------LRSLLAGFRFLL 221 (417)
T ss_pred HHHHHHHHHHHhCCCCCCCC---c-----c--------------------c---ccc-----------hHHHHHHHHHHH
Confidence 77776666666677653200 0 0 0 000 000011233455
Q ss_pred hhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhh
Q 011657 268 HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGG 346 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 346 (480)
+++..+..++...+... ......+.|.+.++ .|. ++.+.++......++.+++.++.+++.||.++++.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~-~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~ 295 (417)
T PRK10489 222 ASPVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQM-GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLS 295 (417)
T ss_pred cChHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCC-ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHH
Confidence 55544443332222111 12344567777777 677 788899999999999999999999999997777777777
Q ss_pred hHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcch
Q 011657 347 VSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFS 426 (480)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~ 426 (480)
..+.+++.+++.. ..+.+......++++ .......+...+++.|..|++.||++.|+.+....+|..+++.+.|
T Consensus 296 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 296 TLGSFLAVGLFGL-----MPMWILAVLCLALFG-YLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred HHHHHHHHHHHHc-----cchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 7666666554432 122222222222222 2222233455578899999999999999999999999999999999
Q ss_pred hhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhhh
Q 011657 427 PLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQRQRGLRL 471 (480)
Q Consensus 427 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (480)
.+.+..|+...+++.+.+.++..++.....+++|++++++.+++.
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 999999988888888877776666666667777776666555443
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=6.6e-28 Score=227.59 Aligned_cols=327 Identities=17% Similarity=0.131 Sum_probs=224.7
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
.++.++.+.+....++.+|.+.++ +|.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~lp~~~~~-------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 12 LCGLLLLTLAIAVLNTLVPLWLAQ-------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667778888999999999988 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhhhhhhhhhh--hhHHHHhc
Q 011657 138 ALVTALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIGSLLVDLVA--GWRYMYGA 185 (480)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~~~~--~wr~~f~~ 185 (480)
++++++++|++.++++|+++|++.+. +|..+|+.+..... .++..++.
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 164 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV 164 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Confidence 99999999999999999999999876 22222222221110 01111111
Q ss_pred hhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHH
Q 011657 186 STPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLRE 265 (480)
Q Consensus 186 ~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (480)
.++........ .+.+..++ . + ++++..+.++
T Consensus 165 ~~~~~~~~~~~-~~~~~~~~--------------------------------~---~-------------~~~~~~~~~~ 195 (381)
T PRK03633 165 TGLVLAAILPL-LFTRILNQ--------------------------------Q---A-------------ENHDSTSIWP 195 (381)
T ss_pred HHHHHHHHHHH-HHhcccCC--------------------------------C---C-------------CCCCCCCHHH
Confidence 11111111111 11111100 0 0 0011123455
Q ss_pred HhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHh
Q 011657 266 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLG 345 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 345 (480)
.++++..+........... .......+.|.+.++.|. +..+.+.......++.+++++..+++.||+++|+.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~ 270 (381)
T PRK03633 196 MLKLRQARLGVNGCIISGI----VLGSLYGLMPLYLNHQGM-SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRV 270 (381)
T ss_pred HHHhcchHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHH
Confidence 6666654433222222111 122344567888888887 77888888899999999999999999999999998887
Q ss_pred hhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc
Q 011657 346 GVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF 425 (480)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~ 425 (480)
+..+..++...+. . . ........+++. ......|...+.+.|..|+++++.+.+..+...++|..++|.+.
T Consensus 271 ~~~~~~~~~~~~~------~-~-~~~~~~~~l~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~ 341 (381)
T PRK03633 271 QVFVVILGSIAML------S-Q-AAMAPALFILGA-AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFT 341 (381)
T ss_pred HHHHHHHHHHHHh------h-h-HHHHHHHHHHHH-HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666554332 1 1 111112222222 22233466667788999988888888888888999999999999
Q ss_pred hhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 426 SPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 426 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
|.+.|+.|+...|.+.+.+.++..+..++
T Consensus 342 G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 342 AMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999888887766655443
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=6.7e-29 Score=238.42 Aligned_cols=367 Identities=17% Similarity=0.112 Sum_probs=229.9
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
....+.+.....+........|.+++ +|++..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhhHHHHH--------cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 33344555555566666666776653 6889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc----CchHHHHHHHHHHHHHHhH------------------------------hHHhhhh----hhhhhh
Q 011657 135 LVGALVTALA----PDFIIMVVGRFVFGIGIGL------------------------------GGYGIGS----LLVDLV 176 (480)
Q Consensus 135 ~~~~~~~~~~----~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~----~l~~~~ 176 (480)
+++.+++++. ++++.+.+.|++.|++.|. +|..+++ ......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9999888765 4677888999999988764 2223322 222223
Q ss_pred hhhHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcc
Q 011657 177 AGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 255 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (480)
.+||+.|++.++++++ .++..+++||+|+....+. ..+ .+++..... .. +.+.+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------~~~--------~~~~~~~~~-~~-------~~~~~ 236 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP---------IEE--------YRNDYPDDY-NE-------KAEQE 236 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC---------chh--------ccccccccc-cc-------ccccc
Confidence 4899999999888877 4455666788775311000 000 000000000 00 00000
Q ss_pred cccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 011657 256 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVV 334 (480)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 334 (480)
.+.++...+.+++++..+...+...+... .......|.|.++++ .|. ++.++++...+..+.++++.++.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~ 311 (438)
T TIGR00712 237 LTAKEIFMQYVLPNKLLWYIAIANVFVYL----LRYGVLDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPGTLLCGWMS 311 (438)
T ss_pred cchHHHHHHHHccCchHHHHHHHHHHHHH----HHHHHHHhHHHHHHHccCC-ChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011234555555544333322222 223555688888876 466 888889999999999999999999999
Q ss_pred hhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHH
Q 011657 335 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVN 414 (480)
Q Consensus 335 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 414 (480)
||+++++....+.....+..............+.+......+.. +....+..........|.+|++.|+++.|+.+...
T Consensus 312 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 390 (438)
T TIGR00712 312 DKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG 390 (438)
T ss_pred HHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH-HHHHccHHHHHHHHHHHhcChhheeeehhhhchHH
Confidence 99965432222322222221111111111111222222222222 11111111121245678999999999999999998
Q ss_pred HHHH-HhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 415 FGAN-ALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 415 ~~g~-~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
++++ +++|.+.|.+.|+.|+...+++.+++.+++.+..+.+.+|.|
T Consensus 391 ~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 391 YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8875 689999999999999999998888877777777766666655
No 43
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=6e-28 Score=229.11 Aligned_cols=316 Identities=19% Similarity=0.157 Sum_probs=214.3
Q ss_pred ccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH---H
Q 011657 67 DIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---A 142 (480)
Q Consensus 67 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~ 142 (480)
......+.+|. +.+| +|.|..+.|++.+.+.+++.++++++|+++||+|||++++.+.++..++.+.. +
T Consensus 30 ~~~~~~p~l~~~l~~~-------lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~ 102 (392)
T PRK12382 30 TVGLPLPVIPLFVHHD-------LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAA 102 (392)
T ss_pred HHHHHhhhhhHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhh
Confidence 45566677775 4556 89999999999999999999999999999999999999999988877765433 2
Q ss_pred h-----cCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHH
Q 011657 143 L-----APDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMY 183 (480)
Q Consensus 143 ~-----~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f 183 (480)
. .++++.+++.|+++|++.+. +|+.+++.+.+.. +||+.+
T Consensus 103 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~ 181 (392)
T PRK12382 103 ILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAALA 181 (392)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHH
Confidence 2 35789999999999999875 5556666555554 899877
Q ss_pred hchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccH
Q 011657 184 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 263 (480)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (480)
.+..+..++........||.++ +++.+.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~ 211 (392)
T PRK12382 182 LTTMVLPLLAWAFNGTVRKVPA--------------------------------------------------HAGERPSL 211 (392)
T ss_pred HHHHHHHHHHHHHHHhccCCCC--------------------------------------------------CcccCchH
Confidence 7655444333222222232210 00000112
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHH
Q 011657 264 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLL 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 343 (480)
++.++.. +...+...+.. ........+.+.++++.+. + +.+.......++.+++.++.|++.||+++|+.+
T Consensus 212 ~~~~~~~--~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 212 WSVVGLI--WKPGLGLALQG----VGFAVIGTFVSLYFASKGW-A--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA 282 (392)
T ss_pred HHHHHHH--HHhHHHHHHHH----HHHhHHHHHHHHHHHhcCC-c--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh
Confidence 2222211 11111111111 1122344566667777665 3 355666777888889999999999999999998
Q ss_pred HhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 344 LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
..+..+..++.+++.. ..+.+.......+.+.+.+. ..+...+...|.+|+++|+++.|+.++...+|..++|.
T Consensus 283 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 283 IVSLLVETVGLLLLWL-----APTAWVALAGAALTGAGCSL-IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred HHHHHHHHHHHHHHHH-----cccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777776665443 12333333333333333322 33444467788899999999999999999999999999
Q ss_pred cchhhHHhhCccHHHHHHHHHHHHHHHhcCCC
Q 011657 424 AFSPLKDLLGAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 424 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
+.|.+.++.|++..|.+.+++.+++.++.+..
T Consensus 357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 357 LAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999888888777765543
No 44
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=7.2e-28 Score=233.57 Aligned_cols=365 Identities=13% Similarity=0.094 Sum_probs=236.3
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCC---------------CccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSG---------------ISWYDLSSVEIGLITSGSLYGALIGSILAFNI 117 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l 117 (480)
+..++.++......|+..++.+.+.+.++.... +.+++.+..+.|++.+.+.+++.+++++.|++
T Consensus 20 i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 99 (465)
T TIGR00894 20 LSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYL 99 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHH
Confidence 334445555666778888888888876522111 01389999999999999999999999999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHhH--------------------------------
Q 011657 118 ADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGL-------------------------------- 163 (480)
Q Consensus 118 ~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~g~g~-------------------------------- 163 (480)
+||+|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+.
T Consensus 100 ~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 179 (465)
T TIGR00894 100 AGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLG 179 (465)
T ss_pred HHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887554 6688999999999999887
Q ss_pred --hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHh-cccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCC
Q 011657 164 --GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS 240 (480)
Q Consensus 164 --~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (480)
+|+.+++.+.+...+||+.|++.++++++..+.++ +.+|+|+... + + .+++. +.++... +
T Consensus 180 ~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~--------~-~-~~~~~-~~i~~~~--~---- 242 (465)
T TIGR00894 180 TFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP--------C-I-SKFEK-KYINSSL--Q---- 242 (465)
T ss_pred HHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC--------C-C-CHHHH-HHHHhhc--c----
Confidence 34444444444323999999999998887555444 4566664110 0 0 00010 0000000 0
Q ss_pred ChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHH
Q 011657 241 APTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILL 319 (480)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 319 (480)
.+..+.+.+..++++++++..+...+..+ ........+..|.|.++++ .|. +..+.++.....
T Consensus 243 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lp~~l~~~~g~-s~~~~g~~~~~~ 306 (465)
T TIGR00894 243 -----------GQKGSTRQSLPIKAIPKSLPVWAIWFAIF----GHFWLYTILPTYLPTFISWVLRV-SGKENGLLSSLP 306 (465)
T ss_pred -----------cccCCCCCCCCHHHHhcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCc-ChHHhHHHHHHH
Confidence 00001112335778887776555444332 2233344666788888765 577 888999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCchHH--------HhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccc
Q 011657 320 GLFKLIMTGLAVLVVERLGRRPLL--------LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGW 391 (480)
Q Consensus 320 ~~~~~~~~~~~g~l~d~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
.++.+++.++.|+++||+++|+.. ..+......+..++.. .....+.+..+..+.+...+. ....+..+
T Consensus 307 ~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 383 (465)
T TIGR00894 307 YLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYAL--PYLSAAFYLTIIILTLANAVS-SGPLAGVL 383 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH--HHcCCchHHHHHHHHHHHHHh-hhhhhhhh
Confidence 999999999999999998654221 1111111111111111 111122222222232222222 22223333
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh---CccHHHHHHHHHHHHHHHhcCC
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL---GAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
....|..| +.+|.+.|+.+..+.+++.++|.+.|.+.+.. +|...|.+.+++.+++.++...
T Consensus 384 ~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 384 INSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 55667777 58999999999999999999999999988753 3667888888888887766554
No 45
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=5.2e-28 Score=230.57 Aligned_cols=341 Identities=21% Similarity=0.271 Sum_probs=226.6
Q ss_pred HhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 011657 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (480)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 136 (480)
..+..+..+++....+...|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAE-------WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 3445566677777788888988887 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHH
Q 011657 137 GALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYM 182 (480)
Q Consensus 137 ~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~ 182 (480)
+.++..++++++.+++.|++.|++.+. +|+.+++.+.+.. +||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~ 173 (398)
T TIGR00895 95 FTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRSL 173 (398)
T ss_pred HHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cceee
Confidence 999999999999999999999998875 4444444444444 89999
Q ss_pred HhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc
Q 011657 183 YGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 261 (480)
Q Consensus 183 f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (480)
|++.++..++ ..+..+++||++++...++ .++..+..++.......+... +. .+.+.+++..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~ 238 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSKR----------PETVRRIVNAIAPQMQAEAQS-AL----PEQKATQGTKRS 238 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhcC----------HHHHHHHHHHHHHhccccccc-cc----cccccccchhhH
Confidence 9998766555 5556667898876543321 111111111111111000000 00 000000011111
Q ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCch
Q 011657 262 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 341 (480)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 341 (480)
..+.+++.+..+........ .+...........+.|.+.++.|. +..+.+.......++.+++.++.+++.||+++|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (398)
T TIGR00895 239 VFKALFQGKTARITVLLWLL-YFMLLVGVYFLTNWLPKLMVELGF-SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV 316 (398)
T ss_pred HHHHHhcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 12223333322322222222 222233344566677888888888 7888999999999999999999999999999984
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhH
Q 011657 342 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALV 421 (480)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~ 421 (480)
..... .+..+...++... ..+.+......++.+.+.+ ...+..+++..|.+|++.|+++.|+.+.+..+|.+++
T Consensus 317 ~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 390 (398)
T TIGR00895 317 TALLL-LLGAVFAVLVGST----LFSPTLLLLLGAIAGFFVN-GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIG 390 (398)
T ss_pred HHHHH-HHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333 3333322222210 1233333333333333333 3345666899999999999999999999999999999
Q ss_pred hhcchhh
Q 011657 422 TFAFSPL 428 (480)
Q Consensus 422 ~~~~~~~ 428 (480)
|.+.|.+
T Consensus 391 ~~~~G~l 397 (398)
T TIGR00895 391 PILAGYL 397 (398)
T ss_pred HHhHHhc
Confidence 9998865
No 46
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=2.4e-27 Score=221.45 Aligned_cols=327 Identities=13% Similarity=0.089 Sum_probs=223.3
Q ss_pred cccccccccccccC-CCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc-
Q 011657 67 DIGSTSCATISIES-PTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA- 144 (480)
Q Consensus 67 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~- 144 (480)
.-...+++.+.+.+ + +|+|..|.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++.+++.+++
T Consensus 49 ~w~~~~~l~~~~~~~~-------~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~ 121 (462)
T PRK15034 49 VWMLFSAVTVNLNKIG-------FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAV 121 (462)
T ss_pred HHHHHHHHHHHhhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 34466777777665 5 99999999999999999999999999999999999999999999999999999987
Q ss_pred ----CchHHHHHHHHHHHHHHhH-----------------------------hHHhhhhhhhh-----------------
Q 011657 145 ----PDFIIMVVGRFVFGIGIGL-----------------------------GGYGIGSLLVD----------------- 174 (480)
Q Consensus 145 ----~~~~~l~~~r~l~G~g~g~-----------------------------~g~~~g~~l~~----------------- 174 (480)
+|++.+++.|++.|++.+. +|..++.++..
T Consensus 122 ~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~ 201 (462)
T PRK15034 122 QNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVP 201 (462)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8999999999999998444 22221111110
Q ss_pred ----hhhhhHHHHhchhHHHHHHHHHHhc-ccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHH
Q 011657 175 ----LVAGWRYMYGASTPLAVIMGMGMWW-LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL 249 (480)
Q Consensus 175 ----~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (480)
...+||..+++..++.++..+..++ +++.|.
T Consensus 202 ~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-------------------------------------------- 237 (462)
T PRK15034 202 QADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-------------------------------------------- 237 (462)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--------------------------------------------
Confidence 0225888888877777765544444 333221
Q ss_pred HhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Q 011657 250 TELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGL 329 (480)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 329 (480)
++......++.+|+++.|...+.. ++.+..+..+.++.|++.++ .+ +.........+..+...+.+++
T Consensus 238 ------~~~~~~~~~~vlk~~~~Wllslly----~~tFG~fvg~s~~lp~~~~~-~~-~~~~~l~~~~l~~l~~~l~rpl 305 (462)
T PRK15034 238 ------SRASIADQLPVLQRLHLWLLSLLY----LATFGSFIGFSAGFAMLAKT-QF-PDVNILRLAFFGPFIGAIARSV 305 (462)
T ss_pred ------cccCHHHHHHHhCCCchhHHHHHH----HHHHHHHHHHHHHHHHHHHH-Hc-ChHHHHHHHHHHHHHHHHHHHh
Confidence 111122355677777666544433 33444455677788888766 33 3333333455567888899999
Q ss_pred HHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH-HHHHHHHHHHHhcccccccceeecccCCh--------
Q 011657 330 AVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA-VVALLLYVGCYQLSFGPIGWLMISEVFPL-------- 400 (480)
Q Consensus 330 ~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------- 400 (480)
+|+++||+|+++++.++++.+.++...+..........+... ...+.......+.+. ...+-++.+.+|+
T Consensus 306 gG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gn-gsvfk~ip~~f~~~~~~~~~~ 384 (462)
T PRK15034 306 GGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGS-GSTFQMIAVIFRQITIYRVKM 384 (462)
T ss_pred hHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccc-hHHHHhhHHHHhhhhhhcccc
Confidence 999999999999998888776666544332221111122222 222222223333333 3444677777774
Q ss_pred -------------hhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-ccHHHHHHHHHHHHHHHhcCCCCC
Q 011657 401 -------------RLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-AGILFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 401 -------------~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 457 (480)
++.|.+.|+....+.+|+++.|.+.|...+..| +...++.+.+..+++.++.+.+..
T Consensus 385 ~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 385 KGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred cccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 257889999999999999999999999988866 555788888888888777766543
No 47
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=8.9e-28 Score=234.92 Aligned_cols=357 Identities=17% Similarity=0.230 Sum_probs=241.7
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
..++++.++..++....++.+|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 77 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAF 77 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH
Confidence 455667788888999999999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhH
Q 011657 135 LVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWR 180 (480)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr 180 (480)
+++++++++++|++.++++|+++|++.+. +|+.+++.+.+.. +||
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~ 156 (485)
T TIGR00711 78 TLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWR 156 (485)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cce
Confidence 99999999999999999999999999886 4555556555554 999
Q ss_pred HHHhchhHHHHHH-HHHHhcccCchHHHHHhcccccCchhhhHHHHH--HHHH--HHhCCCCCCCChhhHHHH-H-----
Q 011657 181 YMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAI--SCLC--RLRGQSIGDSAPTEVDEI-L----- 249 (480)
Q Consensus 181 ~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~-~----- 249 (480)
+.|++.++++++. .+..+++||+++ ...++.|..+..-... .... ...+.+.++....+.... .
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRDKP-----AASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVA 231 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCccc-----cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHH
Confidence 9999998887764 344455666432 0011111111100000 0010 111222222221111100 0
Q ss_pred ---HhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHH
Q 011657 250 ---TELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLI 325 (480)
Q Consensus 250 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 325 (480)
....+.+.+++....++++++.++...+..++..+. .....++.|.++++ .|. ++.++++......++.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~-s~~~~g~~~~~~~~~~~~ 306 (485)
T TIGR00711 232 IIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLG----LYGSFYLLPLYLQQVLGY-TALQAGLHILPVGLAPML 306 (485)
T ss_pred HHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHH
Confidence 000001111122223566666555544433333322 23445677777766 566 888999999999999999
Q ss_pred HHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh-HHHHHHHHHHHHHhcccccccceeecccCChhhhh
Q 011657 326 MTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA-VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRG 404 (480)
Q Consensus 326 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 404 (480)
+.++.|++.||++||+.+..+..+.+++..++... ...+.+. .......+.+.+.+....+.. ....+..|+++++
T Consensus 307 ~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g 383 (485)
T TIGR00711 307 SSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFT--FTPDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIA 383 (485)
T ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHh
Confidence 99999999999999999888887777766655421 1122222 223333333333333333333 5566778999999
Q ss_pred hHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 405 RGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 405 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
++.|+.++.+.+|+.+++.+.+.+.++.
T Consensus 384 ~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 384 RGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988753
No 48
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=5e-28 Score=231.31 Aligned_cols=332 Identities=14% Similarity=0.102 Sum_probs=224.5
Q ss_pred hhhcccccccccccccccccCCCCCCCccccCChhH-----HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVE-----IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
+.++.++......+.+|.+.++ +|.+..+ .+++.+.+.++..++++++|+++||+|||+++..+.++.
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 22 GCFLTGAAFSLVMPFLPLYVEQ-------LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHhhhhHHHHHHH-------hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 3455555666778888888877 7777544 589999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHhH---------------------------------hHHhhhhhhhhhhhhhHH
Q 011657 135 LVGALVTALAPDFIIMVVGRFVFGIGIGL---------------------------------GGYGIGSLLVDLVAGWRY 181 (480)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~---------------------------------~g~~~g~~l~~~~~~wr~ 181 (480)
+++.+++.++++++.+++.|++.|++.+. +|+.+++.+.+.. +||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 173 (408)
T PRK09874 95 GIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRP 173 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHH
Confidence 99999999999999999999999987655 4555555555544 8999
Q ss_pred HHhchhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccccc
Q 011657 182 MYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 260 (480)
Q Consensus 182 ~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (480)
.|++.+++.++..+ ..+++||+++... + ++ . .+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~-----------------~---------------~~~ 208 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPVS------------K-KE-----------------M---------------LHM 208 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccccc------------c-hh-----------------h---------------hHH
Confidence 99999888776443 4445565431000 0 00 0 000
Q ss_pred ccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcc----hHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 261 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASD----ATRVSILLGLFKLIMTGLAVLVVER 336 (480)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~ 336 (480)
.+..+.++++.....+....+... ........+.+.+..+.+. +..+ .+......+++.+++.+..|++.||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr 284 (408)
T PRK09874 209 REVVTSLKNPKLVLSLFVTTLIIQ---VATGSIAPILTLYVRELAG-NVSNIAFISGMIASVPGVAALLSAPRLGKLGDR 284 (408)
T ss_pred HHHHHhCcCCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 001122333332221111111111 1112233344555555433 2222 3455566678888899999999999
Q ss_pred hcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHH
Q 011657 337 LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFG 416 (480)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 416 (480)
++||+.+..+..+..++.+.+.. ..+.+...+...+. +.......+...+...+..|++.+++..++.+.+..+
T Consensus 285 ~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 358 (408)
T PRK09874 285 IGPEKILITALIFSVLLLIPMSF-----VQTPLQLGILRFLL-GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDI 358 (408)
T ss_pred cccchhHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHH-HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHH
Confidence 99999988877766655554332 12333333322233 3333333455556777888889999999999999999
Q ss_pred HHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 417 ANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 417 g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
|..++|.+.|.+.+..|++..|++.+++.+++.+..++
T Consensus 359 g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 359 GNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888887776654
No 49
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=1.9e-27 Score=226.45 Aligned_cols=308 Identities=15% Similarity=0.152 Sum_probs=216.0
Q ss_pred ccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC
Q 011657 66 YDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (480)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 145 (480)
+......|.+|.+.++ +|.++.+.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++++++
T Consensus 20 ~~~~~~~p~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 20 LATDMYLPAFKAIQAD-------LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHhhHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3455677788888877 999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHH
Q 011657 146 DFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAV 191 (480)
Q Consensus 146 ~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~ 191 (480)
+++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.+++.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHH
Confidence 999999999999998765 4555555555554 99999999988887
Q ss_pred HHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhh
Q 011657 192 IMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC 271 (480)
Q Consensus 192 ~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (480)
+..+..++++|+++. + + +++++.+++++++++.
T Consensus 172 ~~~~~~~~~~~~~~~----~-----------~--------------------------------~~~~~~~~~~~~~~~~ 204 (401)
T PRK11043 172 LLILPTLRLKPSKKA----R-----------K--------------------------------QSQDALTFKQLLKSKT 204 (401)
T ss_pred HHHHHHHHcCCCCCc----c-----------c--------------------------------cchHHHHHHHHHcChh
Confidence 765555555554310 0 0 0001123455666655
Q ss_pred hhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHH
Q 011657 272 LKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIV 351 (480)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 351 (480)
.+...+....... .+.....+.|.+.++.|. +..+.++......++.+++.++.+++.||+++|+.+.......+
T Consensus 205 ~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~g~-s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~ 279 (401)
T PRK11043 205 YLGNVLIFAACSA----AFFAWLTGSPFILEQMGY-SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFA 279 (401)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHhHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 4433332222111 122444567778888888 88888888888888999999999999999998887665555544
Q ss_pred HHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 352 ISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
++.+.+...........+..+....+...+.+ ...+.......+..| +.++++.|+.++.+..++..++.+.|.+.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 280 VSVIAIWLASLLSHPSLVPLLIPFCVMAAANG-AIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 44433322111112222222222333333333 334555456667677 5799999999999999999999999988875
Q ss_pred hCcc
Q 011657 432 LGAG 435 (480)
Q Consensus 432 ~g~~ 435 (480)
....
T Consensus 358 ~~~~ 361 (401)
T PRK11043 358 PLLT 361 (401)
T ss_pred ChhH
Confidence 4433
No 50
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1.6e-28 Score=232.47 Aligned_cols=338 Identities=18% Similarity=0.143 Sum_probs=221.4
Q ss_pred hhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 011657 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV 140 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~ 140 (480)
++...++....+...|.+.++ +|.+..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEE-------IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHH-------hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 445556777888889998887 9999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhhh-----hhhhhhhhhHHHHhc
Q 011657 141 TALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIGS-----LLVDLVAGWRYMYGA 185 (480)
Q Consensus 141 ~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~-----~l~~~~~~wr~~f~~ 185 (480)
++++++++.+++.|++.|++.+. +|..++. .+... .+||+.|++
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWVFIV 155 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhHHHH
Confidence 99999999999999999998876 3333333 33333 499999999
Q ss_pred hhHHHHHH-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHH
Q 011657 186 STPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR 264 (480)
Q Consensus 186 ~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (480)
.+++.++. .+..++.||+|+....+. .+. . . .++.+. ..+..+.+.+..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~--------------~-~~~~~~----~~~~~~~~~~~~~~~~~ 210 (379)
T TIGR00881 156 PGIIAIIVSLICFLLLRDSPQSCGLPP----AEE--M--------------P-NEEPDG----DAEKKEEELTKKQIFLQ 210 (379)
T ss_pred HHHHHHHHHHHHheeeCCCccccccCc----ccc--C--------------c-cccccc----ccccccccccchHHHHH
Confidence 88877764 445556677653210000 000 0 0 000000 00000000111122344
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHH
Q 011657 265 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLL 343 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 343 (480)
++++++..+...+...+... .......+.|.++++ .|. +..+.+.......++.+++.++.+++.||..+|+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 285 (379)
T TIGR00881 211 YVLLNKVLWYISLGYVFVYV----VRTGILDWSPLYLTQEKGF-SKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG 285 (379)
T ss_pred HHHhcchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch
Confidence 55666555444333333222 223455566776654 577 888899999999999999999999999986433222
Q ss_pred HhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 344 LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
.............+...... ............+..+....+..+....+..|.+|++.|+++.|+.+....+|+.++|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 364 (379)
T TIGR00881 286 PLAVFFMALIIVSLLVYWLN-PAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGL 364 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcC-cchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhh
Confidence 22211111111111111111 11122222222222222232333344567899999999999999999999999999999
Q ss_pred cchhhHHhhCccHH
Q 011657 424 AFSPLKDLLGAGIL 437 (480)
Q Consensus 424 ~~~~~~~~~g~~~~ 437 (480)
+.|.+.|..||+..
T Consensus 365 ~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 365 PLGYLADGFGWAGA 378 (379)
T ss_pred hHHHHHHhhccccc
Confidence 99999999998754
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=2.5e-27 Score=223.88 Aligned_cols=327 Identities=17% Similarity=0.144 Sum_probs=222.9
Q ss_pred hhccccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH-HHHHHHHHHH
Q 011657 61 GLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI-LAALLYLVGA 138 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~ 138 (480)
+++.++......+.+|. +.++ +|.+..+.|++.+.+.++..+.+++.|+++||+||||.++ .+.++..++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~ 78 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEE-------VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALAC 78 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 34555566677777776 4555 8999999999999999999999999999999999988765 4666667788
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHhH------------------------------------hHHhhhhhhhhhhhhhHHH
Q 011657 139 LVTALAPDFIIMVVGRFVFGIGIGL------------------------------------GGYGIGSLLVDLVAGWRYM 182 (480)
Q Consensus 139 ~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------------~g~~~g~~l~~~~~~wr~~ 182 (480)
+++++++|++.+++.|+++|.+.+. +|+.+++.+.+.. +||+.
T Consensus 79 ~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~ 157 (375)
T TIGR00899 79 LLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVM 157 (375)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHH
Confidence 8899999999999999988866544 4444444444444 89999
Q ss_pred HhchhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc
Q 011657 183 YGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 261 (480)
Q Consensus 183 f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (480)
|++.++..++..+ ..+++||.|++..+ +..+.
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~ 190 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPRGAPG-----------------------------------------------ALTRL 190 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCccc-----------------------------------------------ccCcc
Confidence 9999888776444 44557887531000 00001
Q ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 011657 262 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 340 (480)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 340 (480)
+.++.++++..+.......+.+.. ......+.|.++ ++.|. ++.+.+..........+++.++.|++.||++||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~ 265 (375)
T TIGR00899 191 EVRGLLASRDTRLLFVACTLMWGC----NILYIINMPLLIIHELGL-PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR 265 (375)
T ss_pred hhhhhhcCcchHHHHHHHHHHHHH----HHHHHhhhHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch
Confidence 122344444444333332222221 122333455555 45677 777888887777777888899999999999999
Q ss_pred hHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHh
Q 011657 341 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANAL 420 (480)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i 420 (480)
+.+..+..+..+....+.. .++.+.......+...+.+ ...+....+..|..|+ +++++.++.+...++|..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~g-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 338 (375)
T TIGR00899 266 RLMLLAALAGVAFYTGLAA-----DNSLWALLMLQLLNAIFIG-ILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWII 338 (375)
T ss_pred hHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHH
Confidence 9887766554444333221 1222222222222222222 2234555677888885 5679999999999999999
Q ss_pred HhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 421 VTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 421 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
+|.+.|.+.+..|++..+++.+++.+++.+...+
T Consensus 339 g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 339 AGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999888888777766544
No 52
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=2.9e-27 Score=224.63 Aligned_cols=342 Identities=18% Similarity=0.141 Sum_probs=224.5
Q ss_pred HHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 011657 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (480)
........+..+....+.....+.+|.+.++ ++.+..+.++..+++.+++.++++++|+++||+|||+++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 87 (413)
T PRK15403 15 LFFPMALILYDFAAYLTTDLIQPGIINVVRD-------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITG 87 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHH
Confidence 3333444666667777888999999999887 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhh
Q 011657 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLV 176 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~ 176 (480)
.++++++++++++++|++.++++|+++|++.+. +|+.+|+.+.+..
T Consensus 88 ~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~ 167 (413)
T PRK15403 88 ALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV 167 (413)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998765 5666666665554
Q ss_pred hhhHHHHhchhHHHHHHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcc
Q 011657 177 AGWRYMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 255 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (480)
+||+.|++.+++.++..+ ..+.+||+++. ++ + +..
T Consensus 168 -gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~---~--------------------------~~~----------- 203 (413)
T PRK15403 168 -HWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GA---V--------------------------PFS----------- 203 (413)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cC---C--------------------------CCC-----------
Confidence 999999999888777544 34567886420 00 0 000
Q ss_pred cccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 011657 256 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKLIMTGLAVLVV 334 (480)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 334 (480)
.+.....++++++++..+...+...+... ....+..+.|.++++. |. ++.+.++.......+.+++..+.+++.
T Consensus 204 ~~~~~~~~~~ll~~~~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~-s~~~~gl~~~~~~~~~~i~~~l~~~~~ 278 (413)
T PRK15403 204 AKSVLRDFRNVFRNRLFLTGAATLSLSYI----PMMSWVAVSPVILIDAGGM-TTSQFAWTQVPVFGAVIVANAIVARFV 278 (413)
T ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHH----HHHHHHHhChHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00011234566777666554443333222 2234445667777665 66 888888888888888888888887776
Q ss_pred hhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHH
Q 011657 335 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVN 414 (480)
Q Consensus 335 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 414 (480)
++..+++.......+..++..++........+..+..+...+++..+.+... |......-.. ....+|++.++.+...
T Consensus 279 ~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~-p~~~~~al~~-~~~~~G~a~a~~~~~~ 356 (413)
T PRK15403 279 KDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIF-PTLFRFTLFS-NNLPKGTVSASLNMVI 356 (413)
T ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHh-HHHHHHHhcc-CCCCCcHHHHHHHHHH
Confidence 5544444432222233333322221110112222222333333333333322 3332212111 1224799999999999
Q ss_pred HHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 415 FGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 415 ~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
..+..+++...+++.+. +....+...++++.+....
T Consensus 357 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 357 LMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHH
Confidence 99999999998887775 5566666665555444333
No 53
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=3.8e-27 Score=224.90 Aligned_cols=335 Identities=16% Similarity=0.108 Sum_probs=225.4
Q ss_pred hHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 011657 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (480)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (480)
.+..+.+.+++.+++....++..|.++++ +|+++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-------~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~ 99 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQA-------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLF 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 33444555677788888899999999877 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---HhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhh-
Q 011657 133 LYLVGALVT---ALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVD- 174 (480)
Q Consensus 133 ~~~~~~~~~---~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~- 174 (480)
+++++++++ .++++++.++++|+++|+|.|. +|+.+|+.+..
T Consensus 100 ~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~ 179 (438)
T PRK10133 100 LYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILS 179 (438)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999885 5689999999999999999887 34444433220
Q ss_pred h----------------h--------hhhHHHHhchhHHHH-HHHHH-HhcccCchHHHHHhcccccCchhhhHHHHHHH
Q 011657 175 L----------------V--------AGWRYMYGASTPLAV-IMGMG-MWWLPASPRWLLLCAMKRKGDMQDLRESAISC 228 (480)
Q Consensus 175 ~----------------~--------~~wr~~f~~~~~~~~-~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (480)
. . .+||++|+....+.. +..+. ...+||.+.. +.
T Consensus 180 ~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~---~~----------------- 239 (438)
T PRK10133 180 NVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD---NH----------------- 239 (438)
T ss_pred CCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc---cc-----------------
Confidence 0 0 256666754333332 32222 2234442110 00
Q ss_pred HHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHH-HH-hcCC
Q 011657 229 LCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI-LQ-SAGF 306 (480)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~ 306 (480)
. +....+.....+++++++.++...+..++..... .....|.+.+ .+ ..|.
T Consensus 240 ---------------------~--~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~l~~~~~g~ 292 (438)
T PRK10133 240 ---------------------S--DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQ----TACWSYLIRYAVEEIPGM 292 (438)
T ss_pred ---------------------c--cccccchhhhHHHHHhCchHHHHHHHHHHHHHHH----HHHHHHHHHHHhhhcCCC
Confidence 0 0000011123456777776655443333332222 2233345545 34 4577
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhccc
Q 011657 307 SAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSF 386 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (480)
++.+++.......++.++++++.+++.||+++|+++..+..+..+.+.+... .... ..+..+.+.+.+ ....
T Consensus 293 -s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~l~glg-~~~i 364 (438)
T PRK10133 293 -TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-----AGGH-VGLIALTLCSAF-MSIQ 364 (438)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----cCCh-HHHHHHHHHHHH-HHHH
Confidence 8999999999999999999999999999999999888776666554443322 1111 222233333333 3344
Q ss_pred ccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-ccHHHHHHHHHHHHHHHh
Q 011657 387 GPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-AGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 387 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~ 451 (480)
.|..++...+..|+ +.+.+.++.. ...+|+.++|.+.|.+.|..| .+..|++...+.+.....
T Consensus 365 ~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 365 YPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 56777888888874 4777888886 455788999999999999887 667776655544444433
No 54
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=2.7e-27 Score=222.89 Aligned_cols=315 Identities=19% Similarity=0.149 Sum_probs=223.3
Q ss_pred hcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 011657 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 141 (480)
++..+......+.+|.+..+ ++.+..+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 9 LISLIGTAITQVALPLYVLA-------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 44444556667777777776 88899999999999999999999999999999999999999999999999888
Q ss_pred HhcC-----chHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHH
Q 011657 142 ALAP-----DFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYM 182 (480)
Q Consensus 142 ~~~~-----~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~ 182 (480)
.+++ +++.+++.|+++|++.+. +|+.+++.+.+.. +||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHH
Confidence 8877 999999999999998887 5666666666555 99999
Q ss_pred HhchhHHHHHHHHHHhcc--cCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccccc
Q 011657 183 YGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 260 (480)
Q Consensus 183 f~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (480)
|++.++..++..+..+.+ ||.++. + +.+ . +++. .++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~---~--------------------~~~~----------~~~~~ 200 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAAS----E---IQA---L--------------------SNAV----------LRDTR 200 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCc----c---ccc---c--------------------chhH----------HHHHH
Confidence 998887766644444333 222110 0 000 0 0000 00011
Q ss_pred ccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011657 261 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 339 (480)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 339 (480)
..++..++++..+...+...+..... ......+.|.+.++ .+. +..+.+.......++.+++.++.+++.||.+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (365)
T TIGR00900 201 EGIKFVLKNPLLRTLLLLALLFNLVF---APAIVALFPYVQSKYLGR-GSTHYGWVLAAFGLGALLGALLLGLLGRYFKR 276 (365)
T ss_pred hHHHHHHcCcHHHHHHHHHHHHHHHH---HHHHHHHhHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 23455666665554444333332221 11223566777765 577 78889999999999999999999999999999
Q ss_pred chHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHH
Q 011657 340 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANA 419 (480)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 419 (480)
|+.+..+..+.+++...+... .++.+...+..++. +.......+...++..|..|++.|+++.|+.+...+++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 277 MALMTGAIFVIGLAILVVGLT----PPNFPLFLVLWFAI-GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHhh----chhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 998887766666665554431 11122223333333 3333334456668899999999999999999999999999
Q ss_pred hHhhcchhhHHhhC
Q 011657 420 LVTFAFSPLKDLLG 433 (480)
Q Consensus 420 i~~~~~~~~~~~~g 433 (480)
++|.+.|.+.|..|
T Consensus 352 ~g~~~~g~l~~~~g 365 (365)
T TIGR00900 352 LGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999998754
No 55
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=6.5e-27 Score=221.93 Aligned_cols=310 Identities=17% Similarity=0.175 Sum_probs=215.6
Q ss_pred hcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 011657 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 141 (480)
+..........+..|.+.++ +|.++.+.+++.+.+.++..++++++|+++||+|||+++..+.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAAD-------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHhcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 34455667788889999888 99999999999999999999999999999999999999999999999999999
Q ss_pred HhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchh
Q 011657 142 ALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGAST 187 (480)
Q Consensus 142 ~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~ 187 (480)
+++++++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.+
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~ 166 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLS 166 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHH
Confidence 9999999999999999998876 4555555555554 9999999988
Q ss_pred HHHHHHH-HHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHH
Q 011657 188 PLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 266 (480)
Q Consensus 188 ~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (480)
+..++.. +..+..||+++.. + + . + .++.....++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~---~---~------------------------~-~-------------~~~~~~~~~~~ 202 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPYE---A---R------------------------I-Q-------------ISTYFETFLLL 202 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCCc---c---c------------------------C-C-------------HHHHHHHHHHH
Confidence 8777644 3444566653200 0 0 0 0 00001123455
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHh
Q 011657 267 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLG 345 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 345 (480)
++++..+...+....... .......+.|.+++ +.|. ++.+.+.......++.+++.++.+++.||+++|+.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 277 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFG----GFFAFFSGAPFVYIDIMGV-SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRM 277 (385)
T ss_pred HcCchhHHHHHHHHHHHH----HHHHHHHcChHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 566555444333222222 12234445566655 5677 88889999999999999999999999999999998888
Q ss_pred hhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc
Q 011657 346 GVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF 425 (480)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~ 425 (480)
+..+..++..++...... ....+........+.+.......+.......|..| +.++++.++.+.....++.+.+.+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~ 355 (385)
T TIGR00710 278 GLILFAVSAVLLEITAIL-GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV 355 (385)
T ss_pred HHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 777766666555432111 11222222222222222222233455567778777 6799999999999877666666666
Q ss_pred hhhHH
Q 011657 426 SPLKD 430 (480)
Q Consensus 426 ~~~~~ 430 (480)
+.+.+
T Consensus 356 ~~~~~ 360 (385)
T TIGR00710 356 SLIHG 360 (385)
T ss_pred Hhccc
Confidence 64443
No 56
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=9.4e-26 Score=212.37 Aligned_cols=330 Identities=21% Similarity=0.219 Sum_probs=233.1
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHhH--
Q 011657 88 WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGL-- 163 (480)
Q Consensus 88 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~-- 163 (480)
+++.+..+.+++.+.++.|+.+++++.|+++||||-|+++..+.++.++++++...+. +++.+++.|++||++.|.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 4899999999999999999999999999999999999999999999999999998874 456889999999999997
Q ss_pred --------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHh-cccCchHHHHHh
Q 011657 164 --------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPASPRWLLLC 210 (480)
Q Consensus 164 --------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~ 210 (480)
++..+++++.+...||++.|++.++.+++..++++ +..|+|...
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h--- 223 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH--- 223 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC---
Confidence 44445566666645999999999999999666554 456666410
Q ss_pred cccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccc--ccccHHHHhhhhhhhHHHHHHHHHHHHHhh
Q 011657 211 AMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGED--KEVSLREVFHGKCLKALIIGAGLVLFQQIT 288 (480)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (480)
....+.|.+.+.+....++.+ .+.+++++++++..|..++..+. ...
T Consensus 224 ---------------------------~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~----~~~ 272 (466)
T KOG2532|consen 224 ---------------------------PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFG----GNW 272 (466)
T ss_pred ---------------------------CCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHH----HHH
Confidence 000111122222221111111 46789999999877766654433 333
Q ss_pred ChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc--------h-HHHhhhHHHHHHHHHHHH
Q 011657 289 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR--------P-LLLGGVSGIVISLFLLGS 359 (480)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--------~-~~~~~~~~~~~~~~~~~~ 359 (480)
++..+..|.|.|+++.-..+..+.|+..++..+...+..+++|.++||+.+| + .-.++....++.++.+++
T Consensus 273 ~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 4557888999999875333999999999999999999999999999998653 1 122333333333333332
Q ss_pred HhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH---hhCccH
Q 011657 360 YYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD---LLGAGI 436 (480)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~---~~g~~~ 436 (480)
....+.+..++++.+..+..+.... -.+.-..+..| ++.+..+|+.+.+..+.++++|.+.+.+.. ...|+.
T Consensus 353 ---~~~~~~~~a~~~l~~~~~~~g~~~~-Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 353 ---TSDEHRLLAVILLTIAIGLSGFNIS-GFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred ---cCCCcchHHHHHHHHHHHHcccchh-hhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 1222333333333333333222221 11122223345 889999999999999999999999999994 346889
Q ss_pred HHHHHHHHHHHHHHhcCCCC
Q 011657 437 LFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~ 456 (480)
+|++.+++.+++.++..++-
T Consensus 428 VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHhchheeEee
Confidence 99999999988887665543
No 57
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=7.5e-28 Score=215.35 Aligned_cols=336 Identities=17% Similarity=0.198 Sum_probs=222.4
Q ss_pred cchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 011657 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (480)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 124 (480)
.+++.....+.++++...+...|...+..+.+.+++. ||+++...|++.+.+.+.+.+.+|+.|+++|||.||
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~-------fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~ 98 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTY-------FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK 98 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh-------cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 3344445555677888899999999999999998877 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhh
Q 011657 125 RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGS 170 (480)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~ 170 (480)
+++.+|..+|.++.++++++..||+++++|.+.|+|.+. +|++.|.
T Consensus 99 ~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs 178 (493)
T KOG1330|consen 99 RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGS 178 (493)
T ss_pred eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeee
Confidence 999999999999999999999999999999999999998 5666666
Q ss_pred hhhhhhhhhHHHHhchhHHHHHH-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHH
Q 011657 171 LLVDLVAGWRYMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL 249 (480)
Q Consensus 171 ~l~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (480)
.+......|||.|+..+++++++ ++..++.+|++|-...+. .+.+
T Consensus 179 ~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~---------------------~~~~------------- 224 (493)
T KOG1330|consen 179 VVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV---------------------DGEN------------- 224 (493)
T ss_pred eeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccc---------------------ccCC-------------
Confidence 66666656999999999999985 455556676643100000 0000
Q ss_pred HhhhcccccccccHHH---HhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHH----HhcCCCCCcchHHHHHHHHHH
Q 011657 250 TELSYVGEDKEVSLRE---VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL----QSAGFSAASDATRVSILLGLF 322 (480)
Q Consensus 250 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~ 322 (480)
...+.....++| +.+++......+......+ ..+.+.+|.|.+. +-.|+ +..+..++..+...+
T Consensus 225 ----~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f----v~Gs~sww~p~~~~~~~~~~~~-~~~~~~ifg~vt~~~ 295 (493)
T KOG1330|consen 225 ----KMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQF----VIGSLSWWAPAFIYYSYELIGF-DHNATLIFGGVTCAG 295 (493)
T ss_pred ----cCCCCccchHHHHHHHHccCceeeehHHHHHHHH----hccccchhhhhHHHHHHHHhCC-ccccchhhhhHHHhh
Confidence 001111222233 3332322222222222222 1223444444433 34555 677788888999999
Q ss_pred HHHHHHHHHHHHhhhcCc----hHHHhhhHHH----HHHHHHHHHHhhccCCchhHHHHHHHHHHHH-Hhccccccccee
Q 011657 323 KLIMTGLAVLVVERLGRR----PLLLGGVSGI----VISLFLLGSYYLFLDDVPAVAVVALLLYVGC-YQLSFGPIGWLM 393 (480)
Q Consensus 323 ~~~~~~~~g~l~d~~g~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 393 (480)
+.+|.+++|.++||+.|+ ....+.-..+ ..+...+.+ +...........+.+++++.. ...... ...-+
T Consensus 296 G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~-~~~~~~~s~~~~~il~~~g~~~~~~~~a-~n~~i 373 (493)
T KOG1330|consen 296 GSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL-FPAFTSSSMIFGLILFLVGETISWFNWA-TNNPI 373 (493)
T ss_pred chhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhcccc-cccce
Confidence 999999999999995321 1111111111 111111111 111223333333333333322 233333 33367
Q ss_pred ecccCChhhhhhHHHHHHHHHH-HHHHhHhhcchhhHHhh
Q 011657 394 ISEVFPLRLRGRGLSVAVLVNF-GANALVTFAFSPLKDLL 432 (480)
Q Consensus 394 ~~~~~p~~~~~~~~~~~~~~~~-~g~~i~~~~~~~~~~~~ 432 (480)
..|++|++.|.++.++...+.. +|.+-+|.+.|.+.|+.
T Consensus 374 ~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 374 FLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred eeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 7889999999999999988854 55566666999999863
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=3.2e-26 Score=217.45 Aligned_cols=316 Identities=14% Similarity=0.096 Sum_probs=204.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---h-cCchHHHHHHHHHHHHHHhH-
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L-APDFIIMVVGRFVFGIGIGL- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~g~g~- 163 (480)
+|.+..+.+++.+.+.+++.++++++|+++||+|||+++..+.++++++++++. + .++++.+++.|+++|+|.+.
T Consensus 43 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~ 122 (402)
T TIGR00897 43 LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF 122 (402)
T ss_pred hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH
Confidence 899999999999999999999999999999999999999999999999877653 3 35788999999999998765
Q ss_pred -----------------------------h-----HHhhhhhhhhhhhhhHHHHhchhHHHHH-HHHHHhcccCchHHHH
Q 011657 164 -----------------------------G-----GYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLL 208 (480)
Q Consensus 164 -----------------------------~-----g~~~g~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~ 208 (480)
+ |+.+++.+.+.. ||+..++.......+ ..+..++.++.++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (402)
T TIGR00897 123 AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAFVLTGGVIALFSNKDIFTP-- 199 (402)
T ss_pred HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHHHhccCCCCCc--
Confidence 2 233333333333 655444433333222 22223333432110
Q ss_pred HhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhh
Q 011657 209 LCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQIT 288 (480)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (480)
++. + + +.+ .++....++.+++++..+...+...+ ...
T Consensus 200 ~~~-----------~------------~-----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 236 (402)
T TIGR00897 200 QHM-----------Q------------T-----REK-----------FSELGKAATILFTNPNVLLGGMVRII----NTI 236 (402)
T ss_pred ccc-----------c------------C-----Ccc-----------hhhHHHHHHHHHcChhHHHHHHHHHH----HHH
Confidence 000 0 0 000 00001124456666655443333222 222
Q ss_pred ChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHH-hhhHHHHHHHHHHHHHhhccCCc
Q 011657 289 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL-GGVSGIVISLFLLGSYYLFLDDV 367 (480)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 367 (480)
.......+.|.+.++.|. +..+.+.......++..++.++.|+++||++||+.+. .+.....++.+.+........++
T Consensus 237 ~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGF-STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 334566788888888888 7788888888899999999999999999999888764 22233333322222111111122
Q ss_pred hhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHH
Q 011657 368 PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVL 447 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 447 (480)
.+.......+.+.+.. ...+.. ....|..| ++|+++.|+.+....+++.++|.+.|.+.+..|+...+++.+++.++
T Consensus 316 ~~~~~~~~~~~G~~~~-~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i 392 (402)
T TIGR00897 316 FAVALIIAIALGIFLA-GYVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVV 392 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 2222233333332222 233433 45566655 68999999999999999999999999999999999999998888777
Q ss_pred HHHhcCC
Q 011657 448 SLAFIFX 454 (480)
Q Consensus 448 ~~~~~~~ 454 (480)
+.+...+
T Consensus 393 ~~~~~~~ 399 (402)
T TIGR00897 393 SAFLTAF 399 (402)
T ss_pred HHHHHHH
Confidence 7666544
No 59
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=3.1e-26 Score=217.64 Aligned_cols=333 Identities=11% Similarity=0.072 Sum_probs=225.2
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHhcCchHHH
Q 011657 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPDFIIM 150 (480)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (480)
.+..+.+.++ +|++..|+|++.+.+.++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+
T Consensus 23 ~~l~~~l~~~-------~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (418)
T TIGR00889 23 VTLGSYMSKT-------LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGM 95 (418)
T ss_pred HHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4445555555 89999999999999999999999999999999965 778888999998999999999999999
Q ss_pred HHHHHHHHHHHhH--------------------------------hHHhhhhhhhh---hhhhhHHHHhchhHHHHHHHH
Q 011657 151 VVGRFVFGIGIGL--------------------------------GGYGIGSLLVD---LVAGWRYMYGASTPLAVIMGM 195 (480)
Q Consensus 151 ~~~r~l~G~g~g~--------------------------------~g~~~g~~l~~---~~~~wr~~f~~~~~~~~~~~~ 195 (480)
++.|++.|++.+. +|..+|+.+.. ...+|+ +|++.++..++..+
T Consensus 96 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 96 FPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV 174 (418)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence 9999998885432 44444444432 222344 35556665555545
Q ss_pred HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 196 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 196 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
..+++||+|+- ++ +. +... ++..+.+.++++|++.++..
T Consensus 175 ~~~~~~e~~~~---~~---~~-------------------------~~~~----------~~~~~~~~~~~~k~~~~~~~ 213 (418)
T TIGR00889 175 FALTLPDIPVA---KS---TA-------------------------KMSI----------KVMLGLDAFILFKNKRMAIF 213 (418)
T ss_pred HHhcCCCCCCC---cc---cc-------------------------ccCH----------HHHhhhhHHHHhcCCCeeeH
Confidence 56677887520 00 00 0000 00001123456666655544
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhh
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAA--------SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGV 347 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 347 (480)
++..++..... .....+.+.+.++.|. ++ ...+...+...+..+++.+..+++.||+|+|+++..+.
T Consensus 214 ~~~~~~~~~~~----~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~ 288 (418)
T TIGR00889 214 FFFSMLLGAPL----QITNIFGNGFLHEFGR-NPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSL 288 (418)
T ss_pred HHHHHHHHhHH----HHHHHhHHHHHHHhcc-cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 44333322211 2233455666666665 33 55688889999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhhccCCc-hhHHHH-HHHHHHHHHhcccccccceeecccCChhhhhhHHHHHH-HHHHHHHHhHhhc
Q 011657 348 SGIVISLFLLGSYYLFLDDV-PAVAVV-ALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAV-LVNFGANALVTFA 424 (480)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~g~~i~~~~ 424 (480)
++..++..++... .... ....+. ..++.+.+.. ...+....++.|.+|++.|+++.|+.+ ....+|.+++|.+
T Consensus 289 ~~~~v~~~l~~~~---~~~~~~~~~l~l~~~l~g~~~~-~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 289 VAWALRFGFFAYG---DPEYFGYALLFLSMIVYGCAFD-FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred HHHHHHHHHHHHc---CcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8877776555431 1111 122222 2222333222 233454578899999999999999997 5678999999999
Q ss_pred chhhHHhh------CccHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 011657 425 FSPLKDLL------GAGILFYAFGVIAVLSLAFIFXXXXXXXXS 462 (480)
Q Consensus 425 ~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (480)
.|.+.++. ||+..|.+.+++.+++.++.+++.+|++++
T Consensus 365 ~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 365 SGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999984 477888888888777777777767766543
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=4.7e-26 Score=213.27 Aligned_cols=310 Identities=31% Similarity=0.412 Sum_probs=243.8
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
.++.+...++....++..|.+.++ +|.+..+.+++.+.+.++..+++++.|+++||+|||+.+.++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~ 77 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAED-------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHH
Confidence 344566666777888888888877 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHH
Q 011657 138 ALVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMY 183 (480)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f 183 (480)
.+...++++++.+++.|++.|++.+. +|+.+++.+.+.. +||+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~ 156 (352)
T cd06174 78 SLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLF 156 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHH
Confidence 99999999999999999999998876 4555555555444 799999
Q ss_pred hchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccH
Q 011657 184 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 263 (480)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (480)
++.+++.++..+...+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 174 (352)
T cd06174 157 LILAILGLLLALLLLFLL-------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHH--------------------------------------------------------------
Confidence 888877776544443321
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCch-
Q 011657 264 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP- 341 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~- 341 (480)
+..+... +..+...........+.+.+.++. +. +..+.+.......++..++.++.+++.||++||+
T Consensus 175 ------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (352)
T cd06174 175 ------RLLLLLA----LAFFLLSFGYYGLLTYLPLYLQEVLGL-SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL 243 (352)
T ss_pred ------HHHHHHH----HHHHHHHhHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 1111222 222222333446666777777776 66 8889999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhH
Q 011657 342 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALV 421 (480)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~ 421 (480)
.+..+..+..++.+.+... ++.+... ....+.+.......+....+..|..|+++|++..|+.+....++..++
T Consensus 244 ~~~~~~~~~~i~~~~~~~~-----~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 317 (352)
T cd06174 244 LLLIGLLLAALGLLLLALA-----PSLALLL-VALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALG 317 (352)
T ss_pred HHHHHHHHHHHHHHHHHHh-----ccHHHHH-HHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887777766541 2233333 333334444444556777999999999999999999999999999999
Q ss_pred hhcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 422 TFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 422 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
+.+.+.+.+..+++..+++.+++.+++.+..+.
T Consensus 318 ~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 318 PLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999988888776544
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=2.3e-26 Score=218.89 Aligned_cols=330 Identities=21% Similarity=0.252 Sum_probs=211.5
Q ss_pred cccccccccccccccccCCCCCCCccccCChhHHHHHHHH-----HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 63 LYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSG-----SLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
.+.+|...++...+.+.++.. .+.++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 78 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFF-----PPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIG 78 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhc-----CCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 445566666666666665521 22445555554443 33444578999999999999999999999999999
Q ss_pred HHHHHhcCchH--------HHHHHHHHHHHHHhH------------------------------hHHhhhhhhhh-----
Q 011657 138 ALVTALAPDFI--------IMVVGRFVFGIGIGL------------------------------GGYGIGSLLVD----- 174 (480)
Q Consensus 138 ~~~~~~~~~~~--------~l~~~r~l~G~g~g~------------------------------~g~~~g~~l~~----- 174 (480)
.++++++++++ .+++.|+++|++.+. +|..+++.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~ 158 (394)
T TIGR00883 79 TLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL 158 (394)
T ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999975 488899999998775 44444443321
Q ss_pred ------hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHH
Q 011657 175 ------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEI 248 (480)
Q Consensus 175 ------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (480)
...+||+.|++.+++.++..+....+||+|++..+++
T Consensus 159 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 201 (394)
T TIGR00883 159 LGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE------------------------------------- 201 (394)
T ss_pred cCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh-------------------------------------
Confidence 1248999999887776665555556777764321110
Q ss_pred HHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHH
Q 011657 249 LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMT 327 (480)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 327 (480)
++++.+.+.++.++++..+ ......... ...........+.|.+. ++.|. +..+.+.......++..++.
T Consensus 202 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~ 272 (394)
T TIGR00883 202 ------KHKKKRGPIRETLTKHRKP-FLLGLGLVI-ATTTTFYLITTYLPTYLTQTLGL-SANSALLVLMLSLILFFITI 272 (394)
T ss_pred ------ccccccCCHHHHHHhchHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHH
Confidence 0111223455566554311 222222222 22223345556777777 45666 77888889999999999999
Q ss_pred HHHHHHHhhhcCchHHHhhhHHHHHHH-HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhH
Q 011657 328 GLAVLVVERLGRRPLLLGGVSGIVISL-FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRG 406 (480)
Q Consensus 328 ~~~g~l~d~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 406 (480)
++.+++.||+|||+.+.....+..+.. ..+.. .. ...+.+.......+...+.. ...+...+++.|.+|++.|+++
T Consensus 273 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~~~~ 349 (394)
T TIGR00883 273 PLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA-LL-DSGSFTLFFFLVLGLALIGG-MYTGPMGSFLPELFPTEVRYTG 349 (394)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-Hh-cCCchHHHHHHHHHHHHHHH-HHhhhHHHHHHHhCCccceeeE
Confidence 999999999999987765444333322 22211 11 11222333333333333333 3344556899999999999999
Q ss_pred HHHHH-HHHHHHHHhHhhcchhhHHhhC-ccHHHHHHHHHHH
Q 011657 407 LSVAV-LVNFGANALVTFAFSPLKDLLG-AGILFYAFGVIAV 446 (480)
Q Consensus 407 ~~~~~-~~~~~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~ 446 (480)
.++.+ ....+|..++|.+.|.+.++.| ++..++....+++
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99854 4466788899999999999988 6655555544443
No 62
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1e-26 Score=219.23 Aligned_cols=357 Identities=18% Similarity=0.186 Sum_probs=233.5
Q ss_pred CCcccchhhhHHhHHHHhhhhhcccccccccc-cccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011657 41 SPENYSVSAAILPFLFPALGGLLYGYDIGSTS-CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD 119 (480)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d 119 (480)
..++..++..+.++..+++.++....+...++ +.+..+.+| .+....+.+++.++++++++++++++|.|.|
T Consensus 34 ~~~~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~ed-------l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~ 106 (495)
T KOG2533|consen 34 EERKLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKED-------LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGD 106 (495)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccc-------cchhhhhhhhHHHHHHHHHHHHHhhHHHHHH
Confidence 34555667777777777888887777755443 344445555 8889999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------------------------------hHHhhh
Q 011657 120 ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------------------------------GGYGIG 169 (480)
Q Consensus 120 r~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g 169 (480)
|++-.+.+....+++++..++....+|++.+++.|++.|+..+. +|.++|
T Consensus 107 r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~g 186 (495)
T KOG2533|consen 107 RFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFG 186 (495)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHH
Confidence 99999999999999999999998899999999999999999988 788888
Q ss_pred hhhhhh---------hhhhHHHHhchhHHHHHH-HHHHhcccCchH--HHHHhcccccCchhhhHHHHHHHHHHHhCCCC
Q 011657 170 SLLVDL---------VAGWRYMYGASTPLAVIM-GMGMWWLPASPR--WLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 237 (480)
Q Consensus 170 ~~l~~~---------~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (480)
++++.. ..||||.|++.++++++. +++++++|+.|. |.. .++|..-..++.+..+.
T Consensus 187 gliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl------------~~~ek~~~~~~~~~~~~ 254 (495)
T KOG2533|consen 187 GLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL------------TDEEKELVVERLRESPS 254 (495)
T ss_pred HHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcccc------------chHHHHHHHHHHHhccC
Confidence 887754 359999999999999984 566677999886 111 11111111111111111
Q ss_pred CCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHH
Q 011657 238 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 316 (480)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 316 (480)
.. .+++.+...+++.++++..+...+.. ++.....+.+.+|.|.++++ .|+ +..++..+.
T Consensus 255 ~~--------------~~~~~~~~~~~~a~~dp~vw~~~l~~----~~~~lv~~~~~~~lpl~l~~~~~~-s~~~a~~ls 315 (495)
T KOG2533|consen 255 GG--------------IENKFKWKGFKEALKDPGVWPFSLCY----FFLKLVNYGFSYWLPLYLKSNGGY-SELQANLLS 315 (495)
T ss_pred CC--------------cccccCHHHHHHHHhchhHHHHHHHH----HHHhhccccHHHHHHHHHHcCCCc-ChHHhcccc
Confidence 10 00113445667777777666554433 33334456788999999998 346 889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh----cCchHHHhhhHHHHH-HHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccc
Q 011657 317 ILLGLFKLIMTGLAVLVVERL----GRRPLLLGGVSGIVI-SLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGW 391 (480)
Q Consensus 317 ~~~~~~~~~~~~~~g~l~d~~----g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
++..++++++.+++|+++||+ .+|........+..+ +.+.+.. ........... +..........+...
T Consensus 316 ~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~ 389 (495)
T KOG2533|consen 316 TPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLA-----AAVLPGAYGAF-LIGPYGLIATAIIAL 389 (495)
T ss_pred chHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh-----hccchHHhHHH-HhcchhhHHHHHHHH
Confidence 999999999999999999994 445444443333322 2222221 11122221111 111111111223444
Q ss_pred eeecccCChh-hhhhHHHHHHHHHHHHHHhHhhcchh-hHHhhCccHHHHHH
Q 011657 392 LMISEVFPLR-LRGRGLSVAVLVNFGANALVTFAFSP-LKDLLGAGILFYAF 441 (480)
Q Consensus 392 ~~~~~~~p~~-~~~~~~~~~~~~~~~g~~i~~~~~~~-~~~~~g~~~~~~~~ 441 (480)
..+++....+ .+-+..+......+.+++++|.+.-. ....+++...|...
T Consensus 390 ~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 390 SWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred hhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 5555555444 44444455555566666666655433 33345666676433
No 63
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=7.8e-26 Score=201.01 Aligned_cols=329 Identities=20% Similarity=0.213 Sum_probs=246.7
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchH
Q 011657 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (480)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 148 (480)
...+++.+.+.+| +|+|+.|.+++.+...+...+..++.|.+.||||.|++..++.++..+-++..+++.+++
T Consensus 31 ~l~s~l~~~i~~~-------~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~ 103 (417)
T COG2223 31 TLFSPLGVFIKSD-------FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP 103 (417)
T ss_pred HHHHHHHhhhccc-------cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC
Confidence 3566777777776 999999999999999999999999999999999999999999999999999999986554
Q ss_pred ---HHHHHHHHHHHHHhH----------------------------hHHhhhh----hhhhhhhh---hHHHHhchhHHH
Q 011657 149 ---IMVVGRFVFGIGIGL----------------------------GGYGIGS----LLVDLVAG---WRYMYGASTPLA 190 (480)
Q Consensus 149 ---~l~~~r~l~G~g~g~----------------------------~g~~~g~----~l~~~~~~---wr~~f~~~~~~~ 190 (480)
++++.+++.|++.+. +|..+.. .+.... + ||....+..+..
T Consensus 104 ~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~-g~~~w~~~~~i~~~~l 182 (417)
T COG2223 104 STWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAF-GFLAWRNVAGIYVVAL 182 (417)
T ss_pred chHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 999999999998877 3333333 333333 5 999999888888
Q ss_pred HH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhh
Q 011657 191 VI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG 269 (480)
Q Consensus 191 ~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (480)
++ .++.++.+.|.|...... ++......+.++++
T Consensus 183 ~v~~v~~~~~~~d~p~~r~~~---------------------------------------------~~~~~~~~~~v~~~ 217 (417)
T COG2223 183 AIAAVLAWLGMNDVPEHRASV---------------------------------------------KPQLPAQLKAVFSN 217 (417)
T ss_pred HHHHHHHHHHhCCChhhhccc---------------------------------------------cccchhHHHHHhcC
Confidence 87 455555666666421000 00111346667777
Q ss_pred hhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhH
Q 011657 270 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVS 348 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 348 (480)
++.|.+.+.. +..+.++..++.+.|.++++ ++. +..+++.......+.+.+.++++|+++||+|.+|++...+.
T Consensus 218 ~~~W~lsllY----~~tFG~Fvgfs~~l~~~~~~~fg~-~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~ 292 (417)
T COG2223 218 KDTWLLSLLY----FATFGGFVGFSAYLPMYLVTQFGL-SPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFV 292 (417)
T ss_pred cchHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHH
Confidence 7666654433 33444556777888888765 555 88999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcch
Q 011657 349 GIVISLFLLGSYYLFLD--DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFS 426 (480)
Q Consensus 349 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~ 426 (480)
.++++..++........ .+....+..+.....+.+.+. ...+.++...+| ++.|...|+...++.+|++.-|...+
T Consensus 293 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~Gn-Gsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g 370 (417)
T COG2223 293 GMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGN-GSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFG 370 (417)
T ss_pred HHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCc-chheeechHHHH-hhhhHHHHHHHHhccccccchhHHHH
Confidence 88888777665321111 122233333333334444443 455688888988 57899999999999999999999999
Q ss_pred hhHHhhC-ccHHHHHHHHHHHHHHHhcCCCCC
Q 011657 427 PLKDLLG-AGILFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 427 ~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 457 (480)
...+..| +...|+++..+.+++.+..+....
T Consensus 371 ~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 371 VSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 677888888888888887665443
No 64
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=1.1e-25 Score=212.88 Aligned_cols=327 Identities=14% Similarity=0.099 Sum_probs=224.9
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
..+++..+..|+.....++.+|.++++ +|++..+.|++.+.+.+++.+++++.|++.||+|||+++.++.+++
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~-------~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~ 78 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQA-------FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 344566678888888899999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh---cCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhh--
Q 011657 135 LVGALVTAL---APDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDL-- 175 (480)
Q Consensus 135 ~~~~~~~~~---~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~-- 175 (480)
+++.+++.. .++++.+++.|++.|+|.|. +|+.+++.+...
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~ 158 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNL 158 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999988644 46899999999999999887 455554444211
Q ss_pred -----------------------hhhhHHHHhchhHHHHHHHHHHhc--ccCchHHHHHhcccccCchhhhHHHHHHHHH
Q 011657 176 -----------------------VAGWRYMYGASTPLAVIMGMGMWW--LPASPRWLLLCAMKRKGDMQDLRESAISCLC 230 (480)
Q Consensus 176 -----------------------~~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (480)
..+||++|++.+++.++..+...+ .||.++ + +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~-----------~------- 215 (410)
T TIGR00885 159 PHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S-----------D------- 215 (410)
T ss_pred ccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c-----------c-------
Confidence 136999999888877765444333 333210 0 0
Q ss_pred HHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCC-CCC
Q 011657 231 RLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGF-SAA 309 (480)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~ 309 (480)
.++.+.....+++++++..+...+..+++..... ....+.+.+.++.+. .+.
T Consensus 216 -----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~----~~~s~l~~y~~~~~~~~~~ 268 (410)
T TIGR00885 216 -----------------------AKQISFSASLSRLARIRHYREGVIAQFFYVGVQI----MCWTFIIQYAVRLIPGMTA 268 (410)
T ss_pred -----------------------cccccchhhHHHHHhChhHHHHHHHHHHHHHHHH----HHHHHHHHHHhhccCCCCH
Confidence 0000111234466676666554444444443332 334566666665432 133
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccc
Q 011657 310 SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPI 389 (480)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (480)
..+.........+..+|+++++++.||+++|+.+.+...+..+.+++... . ........+.+.+.+.+..+ |.
T Consensus 269 ~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-----~-~~~~~~~~l~~~glf~s~~f-p~ 341 (410)
T TIGR00885 269 GFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-----A-GGHVGLYCLTLCSAFMSLMF-PT 341 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----c-CChHHHHHHHHHHHHHHHHH-HH
Confidence 33455566666788999999999999999999887777666665555443 1 22233444444444444444 77
Q ss_pred cceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh------CccHHHHHHHHHHHH
Q 011657 390 GWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL------GAGILFYAFGVIAVL 447 (480)
Q Consensus 390 ~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~------g~~~~~~~~~~~~~~ 447 (480)
.++...+..+++.+..+.++...+ +|+++.|.+.|.+.|.. +.+..|++...+.+.
T Consensus 342 i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 342 IYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 778999999876654455555544 99999999999999954 366666664444333
No 65
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=8.3e-26 Score=214.43 Aligned_cols=310 Identities=18% Similarity=0.230 Sum_probs=204.8
Q ss_pred cccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCc
Q 011657 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (480)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 146 (480)
......+.+|.+.++ +|.+..+.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.++++
T Consensus 18 ~~~~~~~~lp~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 18 GIDMYLVGLPRIAAD-------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHhhhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 334455778888887 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHH
Q 011657 147 FIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVI 192 (480)
Q Consensus 147 ~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~ 192 (480)
++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.++.+++
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i 169 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGIL 169 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHH
Confidence 99999999999998876 4455555544444 899999999888776
Q ss_pred H-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhh
Q 011657 193 M-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC 271 (480)
Q Consensus 193 ~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (480)
. .+..+++||+++.. + .+ +.......++.++++.
T Consensus 170 ~~~~~~~~~~~~~~~~---~----~~--------------------------------------~~~~~~~~~~~~~~~~ 204 (392)
T PRK10473 170 VLLLSLFILKETRPAR---A----PA--------------------------------------ASSKPRENSESLLNRF 204 (392)
T ss_pred HHHHHHHHcCCCCCcc---c----CC--------------------------------------ccchHHHHHHHHhCHH
Confidence 4 44455567653100 0 00 0000111234445544
Q ss_pred hhHHHHHHHHHHHHHhhChhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHH
Q 011657 272 LKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 350 (480)
.+...+...+..... ..+..+.|.++ ++.|. +..+.+.......++.+++.++.+++.||+|+|+.+..+..+.
T Consensus 205 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 205 FLSRLVITTLSVTVI----LTFVNTSPVLLMEQMGF-SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred HHHHHHHHHHHHHHH----HHHHHhCHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 333332222221111 12333445444 45677 7778888889999999999999999999999999988888777
Q ss_pred HHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH
Q 011657 351 VISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~ 430 (480)
.++.+.+... ...........+...+...+.. . ....+..|.+.|+ |.......++..+++.+.+.+.+
T Consensus 280 ~~~~~~~~~~-----~~~~~~~~~~~l~~~g~~~~~~-~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 280 LAAGITLALS-----PSHAVSLFGITLICAGFSVGFG-V--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhH-H--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666655432 1222222222222222222221 1 2334444544443 44445556677777778888888
Q ss_pred hhCccHHHHHHHHHH
Q 011657 431 LLGAGILFYAFGVIA 445 (480)
Q Consensus 431 ~~g~~~~~~~~~~~~ 445 (480)
..|+.....+.+.+.
T Consensus 349 ~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 349 VLGISAWNMLIGILI 363 (392)
T ss_pred HhccchhHHHHHHHH
Confidence 888765444444433
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=1.7e-25 Score=210.93 Aligned_cols=328 Identities=15% Similarity=0.087 Sum_probs=230.4
Q ss_pred hhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH----HHHHHHH
Q 011657 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL----ILAALLY 134 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~~~ 134 (480)
+.++.+........|.+|.+.++ +|.+..++|++.+.+.+...++++++|+++||+|||+.. ..+..+.
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~-------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKG-------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 34455555567788888898887 899999999999999999999999999999999985433 2332222
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHhH--------------------------------hHHhhhhhhhhhhhhhHHH
Q 011657 135 LVGALVTALAPDFIIMVVGRFVFGIGIGL--------------------------------GGYGIGSLLVDLVAGWRYM 182 (480)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~--------------------------------~g~~~g~~l~~~~~~wr~~ 182 (480)
.+ ..+..+++++.+++.|+++|.+.+. +|+.+++.+.+.. |||..
T Consensus 84 ~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~~ 160 (382)
T TIGR00902 84 AA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQNI 160 (382)
T ss_pred HH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhHH
Confidence 22 3445788999999999999887654 5666666666665 99999
Q ss_pred HhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccccccc
Q 011657 183 YGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 262 (480)
Q Consensus 183 f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (480)
|++.++..++..+. +.++|+++. ++ + ++ .++.+...+
T Consensus 161 f~~~~~~~~~~~~~-~~~~~~~~~---~~---------~--------------------~~----------~~~~~~~~~ 197 (382)
T TIGR00902 161 LAILTAGLAFMLIG-FLIKPTIPP---KD---------A--------------------IP----------EDESQGDSA 197 (382)
T ss_pred HHHHHHHHHHHHHH-HHcCCCCCC---Cc---------c--------------------cc----------ccccccchh
Confidence 98876553333333 333333110 00 0 00 000111224
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 263 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
.++++|++.++...+...+.... ......+.|.++++.|. +..+.+.......++.+++.++.+++.||+|+|+.
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~~----~~~~~~~~~~~l~~~g~-s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~ 272 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQGA----HAAYYGFSAIYWQAAGI-SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL 272 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCC-CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH
Confidence 56778877666655444433332 23445567777888888 88899999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHH-HHHHHHHhH
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVL-VNFGANALV 421 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~g~~i~ 421 (480)
+.++.++..+...++.. .++.+..+....+.+..++.. .+....++.+. |++.++++.++++. ...+|..++
T Consensus 273 l~~~~~~~~~~~~~~~~-----~~~~~~~~~~q~l~g~~~~~~-~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g 345 (382)
T TIGR00902 273 LLISAIACVGRWAIIGA-----IEAFPLIFLLQILHCGTFAVC-HLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIF 345 (382)
T ss_pred HHHHHHHHHHHHHHHHh-----HhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888776653 233344444444444444443 34455788887 98999999999875 467899999
Q ss_pred hhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 422 TFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 422 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
+.+.|.+.|+.|+ ..|++.+++.+++.++.
T Consensus 346 ~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 346 TAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 9999999999986 67888788777665543
No 67
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=3.3e-25 Score=210.50 Aligned_cols=303 Identities=16% Similarity=0.132 Sum_probs=204.8
Q ss_pred ccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC
Q 011657 66 YDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (480)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 145 (480)
+......+.+|.+.++ +|.++.+.+++.+.+.+++.++++++|+++||+|||+++.++.++..++.+++.+++
T Consensus 22 ~~~~~~~p~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 94 (394)
T PRK11652 22 MAQTIYVPAIADMARD-------LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH 94 (394)
T ss_pred HHHHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 3555667788888877 999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHH
Q 011657 146 DFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAV 191 (480)
Q Consensus 146 ~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~ 191 (480)
+++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.++..+
T Consensus 95 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~ 173 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGA 173 (394)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHH
Confidence 999999999999998765 4555555555544 89999999888776
Q ss_pred HH-HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhh
Q 011657 192 IM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 270 (480)
Q Consensus 192 ~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (480)
+. .+..+++||+++... + +++.+..+++.++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~--------------~--------------------------------~~~~~~~~~~~~~~~ 207 (394)
T PRK11652 174 GVTFSMARWMPETRPADA--------------R--------------------------------RTRVLASYRTLLSNR 207 (394)
T ss_pred HHHHHHHHhCCccCcccc--------------c--------------------------------hhHHHHHHHHHHcCh
Confidence 64 344556777642100 0 000112344556655
Q ss_pred hhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHH
Q 011657 271 CLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSG 349 (480)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 349 (480)
..+...+....... ....+..+.+.++++ .|. +..+.++......++.+++..+.+++.||.+++... ....
T Consensus 208 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~ 280 (394)
T PRK11652 208 RFNCYLLMLIGTLA----GIAVFEACSGVLMGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVIC 280 (394)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHhChHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 55443332222211 122333344555555 677 777888888888888888999999999998833222 2222
Q ss_pred HHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH
Q 011657 350 IVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK 429 (480)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~ 429 (480)
..++.+.+.........+.+.......+...+.+. ..|...++..|.+| ++++++.++.+....+|+.+++.+.+.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 281 CLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGM-LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 22222222111111112223333333333333333 34555577788887 67899999999999999999999888776
Q ss_pred Hh
Q 011657 430 DL 431 (480)
Q Consensus 430 ~~ 431 (480)
+.
T Consensus 359 ~~ 360 (394)
T PRK11652 359 QT 360 (394)
T ss_pred CC
Confidence 54
No 68
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=1.5e-26 Score=216.61 Aligned_cols=310 Identities=25% Similarity=0.354 Sum_probs=215.4
Q ss_pred hhhcccccccccccccc-cccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 011657 60 GGLLYGYDIGSTSCATI-SIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~ 138 (480)
+.++..++.....+.+| .+.++ +|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~ 76 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEE-------LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCC-------STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHH
Confidence 34555556667888888 77777 99999999999999999999999999999999999999999999999997
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHh
Q 011657 139 LVTALAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYG 184 (480)
Q Consensus 139 ~~~~~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~ 184 (480)
++..+++|++.+++.|+++|++.+. +|+.+++.+.+.. +||+.|+
T Consensus 77 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~~ 155 (352)
T PF07690_consen 77 LLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAFL 155 (352)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHHH
T ss_pred HHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccccccc
Confidence 7777778888999999999999877 5666666666444 8999999
Q ss_pred chhHHHHHHHHH-HhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc-c
Q 011657 185 ASTPLAVIMGMG-MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV-S 262 (480)
Q Consensus 185 ~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 262 (480)
+.+++.++..++ .++++++|+....+. +. +.+ .+.+++.. .
T Consensus 156 ~~~~~~~~~~il~~~~~~~~~~~~~~~~-----~~-----------------------~~~---------~~~~~~~~~~ 198 (352)
T PF07690_consen 156 ISAILSLIAAILFILFLPEPPPPRERES-----PK-----------------------ESE---------SKKPKPLKPG 198 (352)
T ss_dssp HHHHHHHHHHHHHHCCC---STTTT--S-----ST-----------------------TTT-----------HHHCCCH-
T ss_pred cccchhhhhhhhHhhhhhhccccccccc-----cc-----------------------ccc---------cccccccccc
Confidence 999998886553 344554432100000 00 000 00011111 2
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHH-HHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 011657 263 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI-LQSAGFSA-ASDATRVSILLGLFKLIMTGLAVLVVERLGRR 340 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 340 (480)
++.+.+++..+..+.......+ .......+.|.+ .+..|. + ..+.+.......+.++++.++.+++.||+++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 273 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFF----VFSGFSFFLPLYLQEVLGF-SGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR 273 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHH----HHHHHHHHHHHHCCHHHHC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccccchhhhhhhhhhHHHH----HHHHhhcccchhhhhccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 5566666655422222222222 223466677776 566677 6 57888889999999999999999999999998
Q ss_pred hHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHh
Q 011657 341 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANAL 420 (480)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i 420 (480)
+..........+..+.+..... .++..+.+....+.+. ......+....+..|.+|+++++++.|+.+...++++.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i 350 (352)
T PF07690_consen 274 RRLLIAILLLILGALGLLLLPF--SSSPVWLIIALFLIGF-GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII 350 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCSHH--HCHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666665555554432111 1223333333333333 333345666789999999999999999999999999998
Q ss_pred Hh
Q 011657 421 VT 422 (480)
Q Consensus 421 ~~ 422 (480)
+|
T Consensus 351 gP 352 (352)
T PF07690_consen 351 GP 352 (352)
T ss_dssp HH
T ss_pred CC
Confidence 87
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=5.8e-26 Score=217.28 Aligned_cols=319 Identities=15% Similarity=0.063 Sum_probs=197.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---hcC-----chHHHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LAP-----DFIIMVVGRFVFGIG 160 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~~-----~~~~l~~~r~l~G~g 160 (480)
+|.+..+.|++.+.+.+++.++++++|+++||+|||++++++..+.+++..... .++ .....++++++.|.+
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFG 120 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999999999999999887666554433211 111 111122233333322
Q ss_pred HhH--------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhccc-CchHHH
Q 011657 161 IGL--------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP-ASPRWL 207 (480)
Q Consensus 161 ~g~--------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~-e~p~~~ 207 (480)
... +|+.+++.+.+ .+|++.|++.++++++..+..++++ |.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (420)
T PRK09528 121 FLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINFWLGSGSALILLVLLFFAKPDAPSTA 198 (420)
T ss_pred hccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhHHHHHHHHHHHHHHHhcccccccchh
Confidence 111 55566565543 2899999998888777555555443 332100
Q ss_pred HHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHh
Q 011657 208 LLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQI 287 (480)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (480)
..+ ++. . +.+++......++.+|++..+...+.........
T Consensus 199 ~~~------------~~~------------------------~--~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~- 239 (420)
T PRK09528 199 KVA------------NAL------------------------G--ANASAVSLKDALALLKLPKFWFLVLYVIGVACFY- 239 (420)
T ss_pred hhc------------cch------------------------h--cccccccHHHHHHHccCCCeEeehHHHHHHHHHH-
Confidence 000 000 0 0000011122345666665544333222221111
Q ss_pred hChhHHHHhHHHHHH----hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhc
Q 011657 288 TGQPSVLYYAASILQ----SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLF 363 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (480)
.....+.|.++. +.+. +..+.+...+...++..++.++.|++.||+|+|+.+..+..+..++.+++.+
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~---- 311 (420)
T PRK09528 240 ---DVFDQQFPNFFASFFATPEQ-GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF---- 311 (420)
T ss_pred ---HHHHHHHHHHHHHHHhccCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh----
Confidence 112222333332 2344 4566788888888999999999999999999999988888777776666543
Q ss_pred cCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHH-HHHHHHHHHHhHhhcchhhHHhhCccHHHHHHH
Q 011657 364 LDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSV-AVLVNFGANALVTFAFSPLKDLLGAGILFYAFG 442 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~ 442 (480)
..+.+..+....+...... ...+....++.|.+|++.+++..+. .++...+|.++++.+.|.+.|..|++..|.+.+
T Consensus 312 -~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~ 389 (420)
T PRK09528 312 -ATGPLEVSILKLLHAFEVP-FLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILG 389 (420)
T ss_pred -cccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHH
Confidence 2333433332222222222 2223344677888999999888766 677788999999999999999999999999888
Q ss_pred HHHHHHHHhcCCCCCC
Q 011657 443 VIAVLSLAFIFXXXXX 458 (480)
Q Consensus 443 ~~~~~~~~~~~~~~~~ 458 (480)
++.++..++.+...++
T Consensus 390 ~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 390 GIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 8877766665554443
No 70
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=1.6e-25 Score=216.87 Aligned_cols=337 Identities=14% Similarity=0.072 Sum_probs=220.8
Q ss_pred hcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhHH-HHHHHHHHH
Q 011657 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAALLYL 135 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~ 135 (480)
+..+......++.+|...++ .|.+..+++.+ +.....+ ++.+++|+++||+ |||+. +..+.+..+
T Consensus 22 ~~~gl~~~~~~~~l~~~l~~-------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 22 FASGLPLALTSGTLQAWMTV-------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 45566666778888888777 78899999986 4444444 6899999999999 99885 667888787
Q ss_pred HHHHHHHhc---CchHHHHHHHHHHHHHHhH------------------------------hHHhhhh----hhhhhhhh
Q 011657 136 VGALVTALA---PDFIIMVVGRFVFGIGIGL------------------------------GGYGIGS----LLVDLVAG 178 (480)
Q Consensus 136 ~~~~~~~~~---~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g~----~l~~~~~~ 178 (480)
++...+++. ++++.+.+.+++.|++.+. +|..+++ .+.+...|
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 887777775 4688899999999988877 3444443 34342349
Q ss_pred hHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccccc
Q 011657 179 WRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGED 258 (480)
Q Consensus 179 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (480)
||..|++.+++.++..+..+++||+++.. . + + ... ++.
T Consensus 173 Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~-----~-----~-------------------~~~----------~~~ 210 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIATLLAPEPTDTI---P-----V-----P-------------------KTL----------EQA 210 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccc---c-----c-----c-------------------cch----------hhh
Confidence 99999999988777666656678764210 0 0 0 000 000
Q ss_pred ccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHH-HHHHHHHHHHHHHHHHHHhhh
Q 011657 259 KEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVS-ILLGLFKLIMTGLAVLVVERL 337 (480)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~ 337 (480)
...++++.++++..+...+...+..... ........|++.++.|+ +..+.+... ....++.+++.+++|+++||+
T Consensus 211 ~~~~l~~~~~~~~~~~~ll~~~l~~~~~---~~~~~~~~~~l~~~~G~-s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~ 286 (491)
T PRK11010 211 VVAPLRDFFGRNNAWLILLLIVLYKLGD---AFAMSLTTTFLIRGVGF-DAGEVGLVNKTLGLLATIVGALYGGILMQRL 286 (491)
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123455665554444333332222211 11222334444456788 888888887 456689999999999999999
Q ss_pred cCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHH
Q 011657 338 GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGA 417 (480)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g 417 (480)
++|+.+..+.++.++....+..... ...+.+.......+.....+... +..+++..+..+++.+++..|+.+....+|
T Consensus 287 g~~~~l~i~~~l~~l~~l~~~~l~~-~~~~~~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg 364 (491)
T PRK11010 287 SLFRALMIFGILQGVSNAGYWLLSI-TDKNLYSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVG 364 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9988777655554444433222111 11222222222222111222222 233477788888889999999999999999
Q ss_pred HHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCC
Q 011657 418 NALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 418 ~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
..+++.+.|.+.|..||...|.+.+++++++.+.....
T Consensus 365 ~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 365 RVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888888888877666554
No 71
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=9.5e-25 Score=208.13 Aligned_cols=365 Identities=14% Similarity=0.128 Sum_probs=218.0
Q ss_pred CCcccchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 41 SPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120 (480)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr 120 (480)
++..+..++.+..+...++......+.....+.+++.+..| +| +.....|+.+.+.++.+++.++.|+++|.
T Consensus 33 p~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-------iG-~~~~~~w~~~~~~l~~av~~~~~G~LSDl 104 (599)
T PF06609_consen 33 PDGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-------IG-GSDNWSWFSTAWTLASAVSFPFVGRLSDL 104 (599)
T ss_pred CCCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-------cC-CCccchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 33334444455554445555444444555556777888877 77 45778899999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH---------------------------------hHHh
Q 011657 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL---------------------------------GGYG 167 (480)
Q Consensus 121 ~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~---------------------------------~g~~ 167 (480)
||||.+++.+.++..+|+++++.++|...++++..+.|+|.|. .|+.
T Consensus 105 fGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ 184 (599)
T PF06609_consen 105 FGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPL 184 (599)
T ss_pred hcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHH
Confidence 9999999999999999999999999999999999999999887 2223
Q ss_pred hhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHH---------------
Q 011657 168 IGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRL--------------- 232 (480)
Q Consensus 168 ~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 232 (480)
++..+... .+|||.|++.++...+.++..+++..+|++...++++. ...+..+.+..+
T Consensus 185 ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~------s~~~~l~~lD~IG~~L~~~Gl~LfLlg 257 (599)
T PF06609_consen 185 IAQLFAAH-SGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKL------SKREQLKELDWIGIFLFIAGLALFLLG 257 (599)
T ss_pred HHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccC------cHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33222222 48999999999887764333332222233222111000 001111111111
Q ss_pred ---hCC-CCCCCChhhHHHHHHh---------hhc-ccccccccHHHHhhhhh-hhHHHHHHHHHHHHHhhChhHHHHhH
Q 011657 233 ---RGQ-SIGDSAPTEVDEILTE---------LSY-VGEDKEVSLREVFHGKC-LKALIIGAGLVLFQQITGQPSVLYYA 297 (480)
Q Consensus 233 ---~~~-~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (480)
.+. ..+|.+...+...... .+. ...++..-..+++++++ +...++ +.+...+. +.....+-
T Consensus 258 l~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lv---i~fi~G~~-~~s~~~l~ 333 (599)
T PF06609_consen 258 LSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLV---ISFISGMN-FFSVNILW 333 (599)
T ss_pred HhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHH---HHHHHHHH-HHHHHHHH
Confidence 122 2344444333222111 111 11123334456777632 222222 22222111 22333333
Q ss_pred HHHHH-hcCCCCC---cchHHHHHHHHHHHHHHHHHHHHHHhhhcC-chHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 298 ASILQ-SAGFSAA---SDATRVSILLGLFKLIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 298 ~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
|.... -++. +. ...++.....+++..++.++.|.+..|++| |+.++++..++.+++.++... ..++....+
T Consensus 334 p~~~~~vf~~-d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~---~~~n~~~~i 409 (599)
T PF06609_consen 334 PQQVVNVFGS-DPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV---RPDNKNAAI 409 (599)
T ss_pred HHHHhhhccC-CCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc---cCCCcchHH
Confidence 43333 3333 33 356788888999999999999999998886 455566766666555555432 122222222
Q ss_pred HHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK 429 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~ 429 (480)
...++.+.+.+.... .....++-..|++..|++.|+..+++.+|+.++..++..+.
T Consensus 410 ~~~~l~g~giG~~~~-~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 410 AFLVLAGFGIGGILV-PAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHHHhHHHHHH-HHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 222233333332222 33356666789999999999999999999999988875553
No 72
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.94 E-value=1e-25 Score=212.72 Aligned_cols=311 Identities=13% Similarity=0.082 Sum_probs=207.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
++.+..+.+++.+.+.+++.++++++|+++||+|||++++++.+++++++++++++.+. ++.|+++|++.+.
T Consensus 33 ~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 33 LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAK 109 (393)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999988887664 7889999999987
Q ss_pred -----------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccc
Q 011657 164 -----------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKR 214 (480)
Q Consensus 164 -----------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 214 (480)
+||.+|+++.+. .|+..+.+.+...++..+..+.+||+|+....+
T Consensus 110 ~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~---- 183 (393)
T PRK11195 110 YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLAALFNLFIPRLGARRPGQ---- 183 (393)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccc----
Confidence 778888877764 477777776665555555556778765310000
Q ss_pred cCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHH
Q 011657 215 KGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVL 294 (480)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (480)
+.+. ....++. ....+.+++++..+..+....+..... ....
T Consensus 184 ~~~~-----------------------~~~~~~~-----------~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~ 225 (393)
T PRK11195 184 SWNP-----------------------IALLRDF-----------FHACRVLWRDKLGRFSLAGTTLFWGAG----ATLR 225 (393)
T ss_pred CCCH-----------------------HHHHHHH-----------HHHHHHHHhCchhHHHHHHHHHHHHHH----HHHH
Confidence 0000 0000000 011345566665544333322222221 1223
Q ss_pred HhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHH
Q 011657 295 YYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVV 373 (480)
Q Consensus 295 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (480)
+..+.+.++ .|. ++.+.+.......++.+++.+..+++.||.++++.+..+.. .++....+.. ..+.+....
T Consensus 226 ~~~~~~~~~~lg~-s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~-----~~~~~~~~~ 298 (393)
T PRK11195 226 FLVLAWAPVALGI-TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMAL-----QHSLLPAYP 298 (393)
T ss_pred HHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHH-----HhHHHHHHH
Confidence 334444443 566 88899999999999999999999999999988887766643 2332222221 122332333
Q ss_pred HHHHHHHHHhcccccccceeecccCChhh-hhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 374 ALLLYVGCYQLSFGPIGWLMISEVFPLRL-RGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
...+.+.+.+... +...+...+..|++. +|++.++.+..++++..++..+.+.+ +..|.+..+.+.+...+++..+.
T Consensus 299 ~~~~~G~~~g~~~-~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 299 LLILIGALGGFFV-VPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHHhhhhhh-hhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 3333333333333 334466777766554 79999999999999999999998844 67888888777666666665555
Q ss_pred CCC
Q 011657 453 FXX 455 (480)
Q Consensus 453 ~~~ 455 (480)
+.+
T Consensus 377 ~~~ 379 (393)
T PRK11195 377 LLW 379 (393)
T ss_pred HHH
Confidence 443
No 73
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.2e-24 Score=206.13 Aligned_cols=303 Identities=17% Similarity=0.154 Sum_probs=209.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
+|.+..+.|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+.
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred -----------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHH-HHHhcccCchHHHHHhccc
Q 011657 164 -----------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMK 213 (480)
Q Consensus 164 -----------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~ 213 (480)
+|+.+++.+. .. +||+.|++.++..++.. +..++.||.+. +
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-----~-- 191 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPAYKL-----S-- 191 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCcccc-----c--
Confidence 6777777776 33 99999999887776643 33444554210 0
Q ss_pred ccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHH
Q 011657 214 RKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSV 293 (480)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
+ . +++.+..+++.++++.++...+.....+.. ....
T Consensus 192 -------~----------------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 227 (400)
T PRK11646 192 -------T----------------V-----------------RTPVREGMTRVLRDKRFVTYVLTLTGYYML----AVQV 227 (400)
T ss_pred -------c----------------c-----------------chhhHHHHHHHHcCchHHHHHHHHHHHHHH----HHHH
Confidence 0 0 000112345566655444332222211111 1123
Q ss_pred HHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh-hhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 294 LYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE-RLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 294 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
..+.|.+.++.+. ++.+.+.......+....+....+++.| |++.++.+..+..+.+++..++.. .++.+...
T Consensus 228 ~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM-----VSNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-----hhhHHHHH
Confidence 4567888888777 6677888877777776665555566555 466566666666666666555433 12222222
Q ss_pred HHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC----ccHHHHHHHHHHHHH
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG----AGILFYAFGVIAVLS 448 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g----~~~~~~~~~~~~~~~ 448 (480)
....++..+.. ...|...+++.+..|+++||++.|+.+....+|..++|.+.|.+.|+.+ ....+++.+++.+++
T Consensus 302 ~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (400)
T PRK11646 302 TLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLIT 380 (400)
T ss_pred HHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 22222322222 2335555788899999999999999999999999999999999998753 344555555555555
Q ss_pred HHh
Q 011657 449 LAF 451 (480)
Q Consensus 449 ~~~ 451 (480)
.+.
T Consensus 381 ~~~ 383 (400)
T PRK11646 381 LLA 383 (400)
T ss_pred HHH
Confidence 544
No 74
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=6.2e-25 Score=207.61 Aligned_cols=299 Identities=20% Similarity=0.257 Sum_probs=199.3
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCch
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF 147 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 147 (480)
.....|.+|.+.++ +|++..+.+++.+.+.++..++++++|+++||+|||+++..+.++.+++.+++.+++++
T Consensus 7 ~~~~~p~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 79 (377)
T PRK11102 7 IDMYLPALPVIAAD-------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTI 79 (377)
T ss_pred HHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 34567888888887 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHH
Q 011657 148 IIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIM 193 (480)
Q Consensus 148 ~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~ 193 (480)
+.+++.|+++|++.+. +|+.+++.+.+.. +||+.|++.+++.++.
T Consensus 80 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHH
Confidence 9999999999998876 4555555555544 9999999988887764
Q ss_pred -HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhh
Q 011657 194 -GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 272 (480)
Q Consensus 194 -~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (480)
.+..+++||+++.. + + . +.+ .++...+.++.++++..
T Consensus 159 ~~~~~~~~~~~~~~~---~---~----------------------~---~~~-----------~~~~~~~~~~~~~~~~~ 196 (377)
T PRK11102 159 AALVFFFIPETLPKE---R---R----------------------Q---PFH-----------LRTTIRNFASLFRHKRV 196 (377)
T ss_pred HHHHHHhCCccCccc---c---c----------------------C---CCC-----------hHHHHHHHHHHHcChHH
Confidence 44455667653200 0 0 0 000 00001123445555543
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHH
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIV 351 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 351 (480)
+...+...+ .+.....+..+.|.++ +..|. ++.+.+.......++.+++.++.+++.||+|+|+.+..+..+..
T Consensus 197 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 271 (377)
T PRK11102 197 LGYMLASGF----SFAGMFSFLTAGPFVYIELNGV-SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQF 271 (377)
T ss_pred HHHHHHHHH----HHHHHHHHHHcCHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 333222221 1222223333444444 45677 88899999999999999999999999999999998887776544
Q ss_pred HHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHH-HHHHhHhhc
Q 011657 352 ISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNF-GANALVTFA 424 (480)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~g~~i~~~~ 424 (480)
+..+.+..... .....+........+.+.... ..+....+..|..| +.++++.++.+.... ++..+++.+
T Consensus 272 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 272 IMGIWLVVSAL-LDLGFWALVVGVAAFVGCVSM-ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 43322221111 011222222222222222222 22233356677777 789999999887653 555555554
No 75
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1.4e-25 Score=212.12 Aligned_cols=321 Identities=15% Similarity=0.129 Sum_probs=217.0
Q ss_pred ccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC
Q 011657 67 DIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (480)
Q Consensus 67 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 145 (480)
......+.+|. +.++ +|.+..++|++.+.+.+++.+++++.|+++||+|||++++++.++.+++.++.++++
T Consensus 22 g~~~~~~~l~~~l~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~ 94 (395)
T PRK10054 22 GRGATLPFMTIYLSRQ-------YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN 94 (395)
T ss_pred HHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh
Confidence 33444454443 4445 899999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHH
Q 011657 146 DFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAV 191 (480)
Q Consensus 146 ~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~ 191 (480)
+++.++++|++.|.+.+. +|+.+++.+.. .+||..|++.++..+
T Consensus 95 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 95 NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAICSA 172 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHHHH
Confidence 999999999888876543 56666666553 389999998887777
Q ss_pred HHHH-HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhh
Q 011657 192 IMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 270 (480)
Q Consensus 192 ~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (480)
+..+ ..+++||+++. + + + ++++..+.++.++++
T Consensus 173 i~~i~~~~~~~~~~~~----~---------~-~--------------------------------~~~~~~~~~~~~~~~ 206 (395)
T PRK10054 173 FPLVFIQIWVQRSEKA----I---------A-T--------------------------------ETGSVWSPSVLLQDK 206 (395)
T ss_pred HHHHHHHHHHhccccc----c---------c-c--------------------------------chhhhhhhhhhccCc
Confidence 6433 34445554210 0 0 0 000001124556666
Q ss_pred hhhHHHHHHHHHHHHHhhChhHHHHhHHHHH---HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhh
Q 011657 271 CLKALIIGAGLVLFQQITGQPSVLYYAASIL---QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGV 347 (480)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 347 (480)
..+...+...+..+... ....+.+.+. ++.+. +....+.......+.........+++.||.++|+.+..++
T Consensus 207 ~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 281 (395)
T PRK10054 207 ALLWFTCSGFLASFVSG----AFASCISQYVMVVADSDF-AEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGT 281 (395)
T ss_pred eehHHHHHHHHHHHHHH----HhhhhHHHHHHHhcccch-HHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHH
Confidence 55554443333222221 1112333333 23333 4445666777777777777788899999999999888887
Q ss_pred HHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchh
Q 011657 348 SGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSP 427 (480)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~ 427 (480)
.+..++...+... .++.+...+...++..+ .....|...+++.+..|++.++++.+..+ ...+|..+||.+.|.
T Consensus 282 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g-~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 282 LCFVIGLVGFIFS----GNSLLLWGMSAAVFTVG-EIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred HHHHHHHHHHHHc----chHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 7777666555321 12222223333333333 22334555578889999999999988765 667899999999999
Q ss_pred hHHhhCccHHHHHHHHHHHHHHHhcC
Q 011657 428 LKDLLGAGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 428 ~~~~~g~~~~~~~~~~~~~~~~~~~~ 453 (480)
+.|+.|+...+++.+.+..+..++..
T Consensus 356 l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 356 ILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 99999988888887777666666554
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=1.1e-24 Score=206.24 Aligned_cols=320 Identities=15% Similarity=0.139 Sum_probs=200.6
Q ss_pred ccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHHH-HHHHHHHHHHHHHH
Q 011657 65 GYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADILGRRREL-ILAALLYLVGALVT 141 (480)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~~~~~~~ 141 (480)
+.......+.+|. +.++ +|.+..++|++.+...+ ++.+++++.++ +||+||||.+ ..+.++.+++..+.
T Consensus 28 ~~~~~~~~p~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~ 99 (393)
T PRK15011 28 GIAGALQTPTLSIFLTDE-------VHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF 99 (393)
T ss_pred HHHHHHHHHHHHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH
Confidence 3344445555555 3445 89999999999876655 66666655666 9999999875 55667777888888
Q ss_pred HhcCchHHHHHHHH-HHHHHHhH-----------------------------------hHHhhhhhhhhhhhhhHHHHhc
Q 011657 142 ALAPDFIIMVVGRF-VFGIGIGL-----------------------------------GGYGIGSLLVDLVAGWRYMYGA 185 (480)
Q Consensus 142 ~~~~~~~~l~~~r~-l~G~g~g~-----------------------------------~g~~~g~~l~~~~~~wr~~f~~ 185 (480)
+++++++.+++.+. +.|.+... +|+.+++.+.+.. |||..|++
T Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~~f~~ 178 (393)
T PRK15011 100 AWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTVMYLS 178 (393)
T ss_pred HHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHHHHHH
Confidence 89999998766554 44444332 4555555555554 99999999
Q ss_pred hhHHHHHHH-HHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHH
Q 011657 186 STPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR 264 (480)
Q Consensus 186 ~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (480)
.++.+++.. +..+++||.++. ++ ++ +. +.+. .+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~-----------------~~-----------~~~~----~~ 212 (393)
T PRK15011 179 AAVAFIVCGVMVWLFLPSMRKE---LP-----------LA-----------------TG-----------TLEA----PR 212 (393)
T ss_pred HHHHHHHHHHHHHhhcCccCCC---Cc-----------cc-----------------cc-----------cccc----cc
Confidence 988877644 445557776420 00 00 00 0000 00
Q ss_pred HHhhhh-hhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 265 EVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 265 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
+++ ..+..+......+ .....+..+.|.+++ +.+. +..+.+.......++.+++.++.|+++||++||+.
T Consensus 213 ---~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~l~~~~~~-~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~ 284 (393)
T PRK15011 213 ---RNRRDTLLLFVICTLMW----GTNSLYIINMPLFIINELHL-PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL 284 (393)
T ss_pred ---cccccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 011 1111111111111 122234456776664 4566 77788888777778888899999999999999988
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
+..+.....+.+..+.. .++.+..+....+.....+.. .+....+..|.+|+ .++++.++.+...++|..++|
T Consensus 285 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~g~~-~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~ 357 (393)
T PRK15011 285 MRVAAVAGVCFYAGMLM-----AHSPAILLGLQLLNAIYIGIL-GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAG 357 (393)
T ss_pred HHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHH
Confidence 77665544443322211 122332222222221222211 12233566888885 599999999999999999999
Q ss_pred hcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 423 FAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 423 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.+.|.+.+..|++..+++.+++.+++.+..+.
T Consensus 358 ~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 358 SLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998888878777777766554
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=1.8e-24 Score=202.37 Aligned_cols=299 Identities=19% Similarity=0.156 Sum_probs=205.5
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchH
Q 011657 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (480)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 148 (480)
...++.+|.+.++ +|.+..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++
T Consensus 17 ~~~~~~lp~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSA-------LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTA 88 (355)
T ss_pred ccCcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHH
Confidence 5678899999988 99999999999999999999999999999999999999999999998888887 789999
Q ss_pred HHHHHHHHHHHHHhH-----------------------------hHH----hhhhhhhhhhh-hhHHHHhchhHHHHHHH
Q 011657 149 IMVVGRFVFGIGIGL-----------------------------GGY----GIGSLLVDLVA-GWRYMYGASTPLAVIMG 194 (480)
Q Consensus 149 ~l~~~r~l~G~g~g~-----------------------------~g~----~~g~~l~~~~~-~wr~~f~~~~~~~~~~~ 194 (480)
.+++.|++.|++.+. +|. .+++.+.+... +||+.|.+.++..++..
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~ 168 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL 168 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999876 233 33333333332 49999887766544332
Q ss_pred HHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhH
Q 011657 195 MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 274 (480)
Q Consensus 195 ~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (480)
. .++|+.++. +. . ++...+...++.++++..+.
T Consensus 169 ~--~~~~~~~~~---~~-------------------------~-----------------~~~~~~~~~~~~~~~~~~~~ 201 (355)
T TIGR00896 169 L--AWIPQVRRR---VA-------------------------A-----------------NQTTTRLTPVRIWRSPLAWQ 201 (355)
T ss_pred H--HHhhhhccc---cC-------------------------C-----------------CCCCCCCCCchhhcCHhHHH
Confidence 2 233433110 00 0 00001122345566655544
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh-cCchHHHhhhHHHHHH
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-GRRPLLLGGVSGIVIS 353 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~ 353 (480)
..+...+.. ..+.....+.|.++++.|. +..+.+...+...++.++++++.|++.||+ +||+.+..+..+.+++
T Consensus 202 ~~~~~~~~~----~~~~~~~~~lp~~~~~~g~-~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 202 VTVFFGLQS----GLYYSLIGWLPAILISHGA-SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 333222222 2223455678888888888 888999999999999999999999999999 4566666666666666
Q ss_pred HHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecc-cCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 354 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISE-VFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
.+.+... ....... ...+++.+ .....+...+...+ ..+++.++...++.+...+++.+++|.+.|.+.|+.
T Consensus 277 ~~~~~~~-----~~~~~~~-~~~l~g~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 277 LCGLLFA-----PMHGLWA-WALVLGLG-QGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHHHh-----hhhHHHH-HHHHHHHh-hhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5544331 1111111 22222222 22233443344443 345577889999999999999999999999999988
Q ss_pred Cc
Q 011657 433 GA 434 (480)
Q Consensus 433 g~ 434 (480)
|.
T Consensus 350 g~ 351 (355)
T TIGR00896 350 GN 351 (355)
T ss_pred cc
Confidence 73
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=2.1e-24 Score=203.70 Aligned_cols=321 Identities=18% Similarity=0.130 Sum_probs=218.5
Q ss_pred cccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHH
Q 011657 65 GYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR----RELILAALLYLVGALV 140 (480)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~~~~~~ 140 (480)
....+...|.+|.+.+| +|.+..++|++.+++.++..++++++|+++||+||| +.+.++..+. ....
T Consensus 17 ~~~~g~~~p~l~~~l~~-------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 17 FFAYGVFLPFWSVWLKG-------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHhhhHHHHHHh-------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 34456778888888877 899999999999999999999999999999999984 3333332222 2233
Q ss_pred HHhcCchHHHHHHHHHHHHHHhH--------------------------------hHHhhhhhhhhhhhhhHHHHhchhH
Q 011657 141 TALAPDFIIMVVGRFVFGIGIGL--------------------------------GGYGIGSLLVDLVAGWRYMYGASTP 188 (480)
Q Consensus 141 ~~~~~~~~~l~~~r~l~G~g~g~--------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~ 188 (480)
...+++++.+++.|++.|++.+. +|+.+++.+.+.. |||..|++.++
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f~~~~~ 166 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAILWILTA 166 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHHH
Confidence 44568999999999999987764 6777777777666 99999988776
Q ss_pred HHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhh
Q 011657 189 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 268 (480)
Q Consensus 189 ~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (480)
..++..+..++.||.++. + +.+ +..++...++++++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~----~---------~~~------------------------------~~~~~~~~~~~~i~~ 203 (382)
T PRK11128 167 GVASMLLGQLLRPTIMPQ----G---------ESR------------------------------QQESAGWPAWKALLK 203 (382)
T ss_pred HHHHHHHHHHccCCCCCc----c---------ccc------------------------------cccccccchHHHHHc
Confidence 555444434444543110 0 000 000111235678888
Q ss_pred hhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhH
Q 011657 269 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVS 348 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 348 (480)
++..+...+..++..... .....+.+.+.++.|. +..+.+.......++.++..++.+++.||+++|+.+..+..
T Consensus 204 ~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~ 278 (382)
T PRK11128 204 EPTVWRFLLCVSLLQGSH----AAYYGFSAIYWQAAGY-SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAI 278 (382)
T ss_pred ChhHHHHHHHHHHHHHHh----HhHHHHHHHHHHHCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 876666554433333221 2334455667778888 77888999888889999999999999999999999888887
Q ss_pred HHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHH-HHHHHHhHhhcchh
Q 011657 349 GIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV-NFGANALVTFAFSP 427 (480)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~g~~i~~~~~~~ 427 (480)
+.+++.+++.. .++.+..++..++.+...... .+....+..+. +++++++..++.+.. ..+|..++|.+.|.
T Consensus 279 ~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~ 351 (382)
T PRK11128 279 CGVVRWGLMGS-----TTALPWLIVIQILHCGTFTVC-HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGF 351 (382)
T ss_pred HHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776655432 233444444444443333332 34444666676 556678888988744 56777999999999
Q ss_pred hHHhhCccHHHHHHHHHHHHHHHh
Q 011657 428 LKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 428 ~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
+.|..|. ..++..+++.+++.++
T Consensus 352 l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 352 LYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999886 4666666666655443
No 79
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.5e-25 Score=210.48 Aligned_cols=390 Identities=17% Similarity=0.139 Sum_probs=251.3
Q ss_pred CcccchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011657 42 PENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL 121 (480)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~ 121 (480)
+..+.|-.....++.. .+.+|... .++...+.++++ |+.+..+++|+.++....+.+.+++.+.+.|||
T Consensus 40 dGG~gWvV~~a~fl~~---~~~~g~~~-~~Gv~~~~~~~~-------f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf 108 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVN---LSTDGLIN-SFGLLFEELMDY-------FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF 108 (509)
T ss_pred CCCeeeeeeHhHHHHH---Hhhhcchh-eehhhHHHHHHH-------hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc
Confidence 5555565444442222 23444443 344677777777 899999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHhH-------------------------hHHhhhhhhhh-
Q 011657 122 GRRRELILAALLYLVGALVTALAPDFIIMVVG-RFVFGIGIGL-------------------------GGYGIGSLLVD- 174 (480)
Q Consensus 122 Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~g~g~-------------------------~g~~~g~~l~~- 174 (480)
|.|++.+.|.++..+|.++.+++++++++++. -++.|+|.|. .|..+|..+..
T Consensus 109 g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~ 188 (509)
T KOG2504|consen 109 GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPP 188 (509)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHH
Confidence 99999999999999999999999999988885 6888999988 34444443331
Q ss_pred ------hhhhhHHHHhchhHHHHHHHHHHhcccC-chHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCCh--hhH
Q 011657 175 ------LVAGWRYMYGASTPLAVIMGMGMWWLPA-SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP--TEV 245 (480)
Q Consensus 175 ------~~~~wr~~f~~~~~~~~~~~~~~~~~~e-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 245 (480)
...|||+.+++.+.+.+-.++....+++ ++..... +.++..+.....+.+....++..........+ ...
T Consensus 189 l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (509)
T KOG2504|consen 189 LLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSN 267 (509)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccc
Confidence 2239999999999888765555444433 2211000 00000000000000000000000000000000 000
Q ss_pred HHHHHhhhcccc--cccccH----HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHH
Q 011657 246 DEILTELSYVGE--DKEVSL----REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILL 319 (480)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (480)
.+..+..+.+.. ..+... .++++++.+. .+.+.......++.....++|.+.++.++ +..++....++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl----~~~~~~~~~~~g~~~p~~~l~~~~~~~g~-~~~~aa~l~Sii 342 (509)
T KOG2504|consen 268 LATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFL----LLALSNLFAYLGFNVPFVYLPSYAKSLGL-SSNDAAFLLSII 342 (509)
T ss_pred hhhhhhCCccccccchhhhhhhhhHHHHcCchHH----HHHHHHHHHHHHHHHHHHHHHHHHhhcCC-ChhhhHHHHHHH
Confidence 000111111011 111111 4566664333 33334444445566778888999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCch--HHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeeccc
Q 011657 320 GLFKLIMTGLAVLVVERLGRRP--LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEV 397 (480)
Q Consensus 320 ~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
++..++++++.|++.|+...++ +..++.+..+++...+.. ...+..+...+++.+.....+..+....+.|+
T Consensus 343 gi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~ 416 (509)
T KOG2504|consen 343 GVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF------ATTYVGLIVFSILFGFCVGSFSSLTPVILVDL 416 (509)
T ss_pred HHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987443 344444444444433332 23444455555555554445555555688999
Q ss_pred CChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-ccHHHHHHHHHHHHHHHhcCC
Q 011657 398 FPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-AGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 398 ~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.+.++-..+.|+...++.++..+||++.|.+.|..| |...|+..+.+.+++.++.++
T Consensus 417 ~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 417 VGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred cChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHH
Confidence 999999999999999999999999999999999988 888888888887777765444
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=2.2e-24 Score=204.81 Aligned_cols=328 Identities=15% Similarity=0.078 Sum_probs=210.6
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH---Hhc
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA 144 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~ 144 (480)
.....+.+|....++ +|.+..+.+++.+.+.+++.++++++|+++||+|||+.++.+.+..+++.... .+.
T Consensus 18 ~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 91 (396)
T TIGR00882 18 MSAYFPFFPIWLHDV------NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFG 91 (396)
T ss_pred HHHHHHHHHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345555665544321 79999999999999999999999999999999999999988777665544332 122
Q ss_pred C-----chHHHHHHHHHHHHHHhH--------------------------------hHHhhhhhhhhhhhhhHHHHhchh
Q 011657 145 P-----DFIIMVVGRFVFGIGIGL--------------------------------GGYGIGSLLVDLVAGWRYMYGAST 187 (480)
Q Consensus 145 ~-----~~~~l~~~r~l~G~g~g~--------------------------------~g~~~g~~l~~~~~~wr~~f~~~~ 187 (480)
+ .+..+++.|++.|++.+. +|+.+++.+.+ . +||..|++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~-~~~~~f~~~~ 169 (396)
T TIGR00882 92 PLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFS-I-DPQIVFWLGS 169 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhc-c-CchHHHHHHH
Confidence 2 233456678888876654 56666666544 2 8999999998
Q ss_pred HHHHHHHHHHhc-ccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHH
Q 011657 188 PLAVIMGMGMWW-LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 266 (480)
Q Consensus 188 ~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (480)
++.++..+..+. .||+|+.. +..+ ..+ ...++.+..+.+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~----~~~------------------~~~~~~~~~~~~~~ 211 (396)
T TIGR00882 170 GFALILMLLLMFAKPKAPSSA----------------TVAN----ALG------------------ANASAFSLKLALEL 211 (396)
T ss_pred HHHHHHHHHHHHhCCCCchhh----------------hhhc----ccc------------------cccCCCCHHHHHHH
Confidence 888775544444 44443200 0000 000 00011112245677
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhc----CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 267 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA----GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
++++..+...+....... .+.....+.+.+.++. +. +....+.......+...++.+..+++.||+|+|+.
T Consensus 212 l~~~~~~~~~l~~~~~~~----~~~~~~~~~~~y~~~~~~~~~~-~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 212 FRQRKFWMFVLYVVGVAC----VYDVFDQQFANFFTSFFATPQQ-GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HcCCcHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 777665443332222111 1122323344444443 33 44566788888888899999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHH-HHHHHHHHHHhH
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSV-AVLVNFGANALV 421 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~g~~i~ 421 (480)
+.++..+.++...+... ..+.+..+....+...+... .......+..+..|++.++++.+. .+....+|++++
T Consensus 287 l~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~ 360 (396)
T TIGR00882 287 LLIAGTIMSVRIIGSSF-----ATTALEVVILKMLHAFEVPF-LLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFL 360 (396)
T ss_pred HHHHHHHHHHHHHHHHh-----cCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHH
Confidence 88888777776655432 23344333333332222221 112333466777788888887776 677899999999
Q ss_pred hhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 422 TFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 422 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
+.+.|++.|..|+...|.+.+++.++..++.
T Consensus 361 ~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 361 STLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888877766554
No 81
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=5.3e-24 Score=200.48 Aligned_cols=306 Identities=16% Similarity=0.142 Sum_probs=198.6
Q ss_pred ccccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 011657 63 LYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (480)
Q Consensus 63 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 141 (480)
....+....++..|. ++++ +|++..+.+++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDD-------LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHH-------hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 333345567888885 7777 99999999999999999999999999999999999999999999999999999
Q ss_pred HhcC-chHHHHHHHHHHHHHHhH---------------------------------hHHhhhhhhhhh---------hhh
Q 011657 142 ALAP-DFIIMVVGRFVFGIGIGL---------------------------------GGYGIGSLLVDL---------VAG 178 (480)
Q Consensus 142 ~~~~-~~~~l~~~r~l~G~g~g~---------------------------------~g~~~g~~l~~~---------~~~ 178 (480)
++++ +++.+++.|+++|++.+. +|+.+++.+... ..+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999 999999999999998665 233333333321 237
Q ss_pred hHHHH-hchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhccc
Q 011657 179 WRYMY-GASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVG 256 (480)
Q Consensus 179 wr~~f-~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (480)
||+.| +..+++..+ ..+...+.+|+|+... ++... +.... ... .+
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~--------~~~~~-~~~----------~~ 211 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTPPGKP--------------ATGKL--------SFKGA-RWS----------VG 211 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCCcccc--------------cchhc--------ccccc-ccc----------cc
Confidence 99999 444554444 3444455666653100 00000 00000 000 00
Q ss_pred ccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 011657 257 EDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVE 335 (480)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 335 (480)
++.....++.++++..+...+...+... .......+.|.++++ .|. ++.+++.......+.+++++++.|++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 286 (366)
T TIGR00886 212 TGALGDQLKVFRDRHTWILALLYSVTFG----SFLGVSSIFAMFFKDQFGL-SKVTAGAYASLGGLLGSLARPLGGAISD 286 (366)
T ss_pred chhHHHHHHHHhccchhhHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHhhccchHHH
Confidence 0001134456666554443333222222 223445566667654 577 7888898889999999999999999999
Q ss_pred hhcCchHHHhhhHHHHHHHHHHHHHhhccCC-chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHH
Q 011657 336 RLGRRPLLLGGVSGIVISLFLLGSYYLFLDD-VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVN 414 (480)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 414 (480)
|+|+|+.+..+......+..++.... ... +.+.......+.....+... +..+.+..+..| +++|++.|+.+.++
T Consensus 287 r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~ 362 (366)
T TIGR00886 287 RLGGARKLLMSFLGVAMGAFLVVLGL--VSPLSLAVFIVLFVALFFFSGAGN-GSTFALVPHIFR-RATGAVSGLVGAIG 362 (366)
T ss_pred hhccchhHHHHHHHHHHHHHHHHhcC--CCcchHHHHHHHHHHHHHHhcccc-chhhhcchhhch-hhcccHHHHHHHhc
Confidence 99998887776666555554443211 111 22222222233333333333 345578888888 68999999999887
Q ss_pred HHH
Q 011657 415 FGA 417 (480)
Q Consensus 415 ~~g 417 (480)
++|
T Consensus 363 ~~g 365 (366)
T TIGR00886 363 NLG 365 (366)
T ss_pred cCC
Confidence 765
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.7e-23 Score=183.53 Aligned_cols=331 Identities=18% Similarity=0.209 Sum_probs=242.1
Q ss_pred HHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
+.+..-.++.|+......+.+|.+++- |+++..|.+++...++.||.+++++.|++.+|+|+|+.+++|+.++
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~-------f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~ 88 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEV-------FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLY 88 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHH-------hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHH
Confidence 344455578888888899999999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH---hcCchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhh--
Q 011657 135 LVGALVTA---LAPDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDL-- 175 (480)
Q Consensus 135 ~~~~~~~~---~~~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~-- 175 (480)
++++.+.. ...+|..++++-|+.|.|.+. +||.+|+.+...
T Consensus 89 avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~ 168 (422)
T COG0738 89 AVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV 168 (422)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 99999984 667899999999999999998 566666655431
Q ss_pred ----------------hhhhHHHHhchhHHHHHHHHHHhcc--cCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCC
Q 011657 176 ----------------VAGWRYMYGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 237 (480)
Q Consensus 176 ----------------~~~wr~~f~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (480)
...||++|...+...+++.+..... |+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~-------------------------------- 216 (422)
T COG0738 169 ALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV-------------------------------- 216 (422)
T ss_pred hhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc--------------------------------
Confidence 1246777777766666554444432 33211
Q ss_pred CCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHH
Q 011657 238 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 316 (480)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 316 (480)
..+...+.......+++++++.+.-.+..+++...+. ....+++.++.+ .|. +..++....
T Consensus 217 -------------~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Ev----a~gsfl~~y~~~~~g~-~~~~aa~~~ 278 (422)
T COG0738 217 -------------AAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEV----AIGSFLVSYLEELLGL-NEQQAAYYL 278 (422)
T ss_pred -------------ccccccccccchHHHHHhChHHHHHHHHHHHHHhHHH----HHHHHHHHHHHhcCCc-cHHHHHHHH
Confidence 0000011112257889999988888777777777654 455566777766 566 889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecc
Q 011657 317 ILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISE 396 (480)
Q Consensus 317 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+....+.++|++++.++..|+...+.+.+...+..+.++...+. +..+.+....+. +.+.....|..++...+
T Consensus 279 s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~------~g~v~~~~l~~i-g~F~simfPTIfslal~ 351 (422)
T COG0738 279 SFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI------GGVVALYALFLI-GLFNSIMFPTIFSLALK 351 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh------cChHHHHHHHHH-HHHhHHHHHHHHHHHHh
Confidence 99999999999999999999998888877665555444444331 223333333333 34444455777788889
Q ss_pred cCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 397 VFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 397 ~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
..| ++.. ..|....+..+|+++.|.+.|++.|..|....+.....+|.+-.++
T Consensus 352 ~l~-~~ts-~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~~ 404 (422)
T COG0738 352 NLG-EHTS-VGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVLF 404 (422)
T ss_pred ccC-cccc-ccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 888 4333 3344455677899999999999999999877776555555555533
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=1.2e-22 Score=193.15 Aligned_cols=334 Identities=18% Similarity=0.109 Sum_probs=214.8
Q ss_pred hhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhH-HHHHHHHHH
Q 011657 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRR-ELILAALLY 134 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~ 134 (480)
++..+.........+|.+-++ .|++.+++|++..+... .+..+++|+++||+ |||| .++++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~-------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTV-------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHH
Confidence 356666777778888888877 79999999999777775 69999999999999 8875 788888888
Q ss_pred HHHHHHHHhc---CchHHHHHHHHHHHHHHhH------------------------------hHHhhh----hhhhhhhh
Q 011657 135 LVGALVTALA---PDFIIMVVGRFVFGIGIGL------------------------------GGYGIG----SLLVDLVA 177 (480)
Q Consensus 135 ~~~~~~~~~~---~~~~~l~~~r~l~G~g~g~------------------------------~g~~~g----~~l~~~~~ 177 (480)
+++..+.++. .+++.+++..++.++..+. +|..++ ..+.+...
T Consensus 79 ~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~ 158 (402)
T PRK11902 79 AASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL 158 (402)
T ss_pred HHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc
Confidence 8888887876 3567777787777766654 233333 33334334
Q ss_pred hhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccc
Q 011657 178 GWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE 257 (480)
Q Consensus 178 ~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (480)
+||..|++.++..++..+..+++||+++.. + +.+ +. .+
T Consensus 159 gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~---------~~~--------------------~~----------~~ 196 (402)
T PRK11902 159 GWGNTYLLMAGLMLAGALTTLWAPEPEVPA---R---------PPR--------------------SL----------GE 196 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCcccc---c---------ccc--------------------hh----------HH
Confidence 899999998888776555556677764210 0 000 00 00
Q ss_pred cccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHH-HHHHHHHHHHHHHHhh
Q 011657 258 DKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLG-LFKLIMTGLAVLVVER 336 (480)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~ 336 (480)
+....++++++++.++..++...+....... ......+.+.++.|. ++.+.++.....+ ++.+++.++++++.||
T Consensus 197 ~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~---~~~~~~~~l~~~~G~-~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r 272 (402)
T PRK11902 197 AVVGPLRDFFSRRGAWALLLLIVLYKLGDAF---AGSLSTTFLIRGAGF-SAGEVGIVNKTLGLAATIVGALAGGTLMVR 272 (402)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHH---HHHHHHHHHHHhcCC-CHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 0122456677777666655443333322211 112233445566787 7777888775554 5688999999999999
Q ss_pred hcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHH---HHHHHHhcccccccceeecccCChhhhhhHHHHHHHH
Q 011657 337 LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALL---LYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV 413 (480)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 413 (480)
+++|+.+..+..+..+..+.+...... .++.+....... +..+.......+....++.+.+|.+.+ ++.+..
T Consensus 273 ~g~~~~l~~~~~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 347 (402)
T PRK11902 273 LGLYRSLMLFGVLQAVSNLGYWVLAVT-PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSAL 347 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHH
Confidence 999988776666555444333221111 122232222222 122222223344555677777776544 555555
Q ss_pred HHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 414 NFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 414 ~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
..++..+++.+.|.+.|..|+...|.+.+.+++++.++.+.
T Consensus 348 ~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 348 ASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 66677766778999999999998899988888887766544
No 84
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.91 E-value=3.6e-22 Score=191.57 Aligned_cols=344 Identities=21% Similarity=0.227 Sum_probs=235.9
Q ss_pred cccchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 011657 43 ENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122 (480)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G 122 (480)
+++..+.+|..-.+..++..++...... +..+ +.-|+..++++.++..+...+.++++|.++||+.
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~w-------lv~~-------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~d 73 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAW-------LVTQ-------LTGSPLMVALVQAASTLPILLLSLFAGALADRFD 73 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHH-------HHHH-------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4455666777766666666544443322 2222 4558899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHhH----------------------------------
Q 011657 123 RRRELILAALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGL---------------------------------- 163 (480)
Q Consensus 123 rr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~g~g~---------------------------------- 163 (480)
||++++.+-++.++..++.++ ..+.+.+++.-++.|++.+.
T Consensus 74 rrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~ 153 (524)
T PF05977_consen 74 RRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARI 153 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHh
Confidence 999999998887766554443 24788999999999999887
Q ss_pred hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChh
Q 011657 164 GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPT 243 (480)
Q Consensus 164 ~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (480)
+||.+||++.... |-.+.|.+.++..++..+.....+..++ .+. . .++
T Consensus 154 iGPalgG~Lva~~-G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~---------~-------------------~~e 201 (524)
T PF05977_consen 154 IGPALGGILVAFF-GAAAAFLINALSFLISILALLRWKPPPP---PSS---------L-------------------PRE 201 (524)
T ss_pred ccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcccccc---ccc---------c-------------------chh
Confidence 8999999988766 7788888887766654444443332210 000 0 000
Q ss_pred hHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHH
Q 011657 244 EVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLF 322 (480)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 322 (480)
.. .+.-+..++-+.+++..+..++...+..+. ...+...+|.+.++ .+. ++...|++.+..+++
T Consensus 202 ~~----------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~----~~a~~aLlPl~a~~~l~~-~a~~yGll~a~~gvG 266 (524)
T PF05977_consen 202 RF----------FSALREGLRYVRSSPPLRSVLLRSFLFNLF----ASAVWALLPLFARDVLGG-GASGYGLLLAAFGVG 266 (524)
T ss_pred hh----------hhhHHHHHHHHhcchHHHHHHHHHHHHHHh----hhHHHHhhhHHHHHHhCC-cHHHHHHHHHHHHHH
Confidence 00 001112233333444444333322222221 12333456776654 566 788899999999999
Q ss_pred HHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhh
Q 011657 323 KLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRL 402 (480)
Q Consensus 323 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 402 (480)
.++|.++.+++.+|+++++++..+.++.+++++.+++ ..+.+.....+++.+.+... ......+..++..|++.
T Consensus 267 ai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal-----~~~~~~~~~~l~l~G~~~~~-~~~~~~t~~Q~~~P~~~ 340 (524)
T PF05977_consen 267 AILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL-----SPSFWLALIALFLAGAAWII-ANSSLNTLVQLSVPDWV 340 (524)
T ss_pred HHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHH
Confidence 9999999999999999988888888777777666654 23344444444444433333 33444578899999999
Q ss_pred hhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcC
Q 011657 403 RGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 403 ~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 453 (480)
||++++++++....+..+|..+.|.+.+..|....+.+.+++.+++.++.+
T Consensus 341 ~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 341 RGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888877766655555543
No 85
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=7.1e-24 Score=185.78 Aligned_cols=313 Identities=12% Similarity=0.088 Sum_probs=216.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
++-..+++|++.+.+.+.+.+..++.|.+.||+|+|-.+++|++++...+++.++.++|+.+++.|.+||+|.+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 566788999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhccc
Q 011657 164 ------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMK 213 (480)
Q Consensus 164 ------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~ 213 (480)
+||.+|+++.+.. |.+.+|++.++++++-..+.+++-|..+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~~-------- 251 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPTE-------- 251 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCccc--------
Confidence 7888888887776 9999999999999996555555433210
Q ss_pred ccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHH
Q 011657 214 RKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSV 293 (480)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
.+.++..+..+++++++++..+....... +++.+ ....
T Consensus 252 --------------------------------------~~~~~~~~~~~~~~Ll~dP~I~~~agai~---~~n~~-lafL 289 (464)
T KOG3764|consen 252 --------------------------------------MDPDSTEQGTPMWSLLMDPYILLIAGAIT---FSNSS-LAFL 289 (464)
T ss_pred --------------------------------------cCccccccCccHHHHHhCchHhhhhcchh---hccch-HHHh
Confidence 00002233446778888776543322211 11111 1111
Q ss_pred HHhHHH-HHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 294 LYYAAS-ILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 294 ~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
--..+. ..++..- +..+.++......+...++..+.|.+.||+++.+.+.....+..++......-+...-...+...
T Consensus 290 ePtlslwm~e~m~~-p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~ 368 (464)
T KOG3764|consen 290 EPTLSLWMLETMFT-PGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPN 368 (464)
T ss_pred CcccHHHHHHhccC-CCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhh
Confidence 111222 2344442 45589999999999999999999999999995444433333333332222211110001112222
Q ss_pred HHHHHHHHHHhcccccccceeecccCChh---hhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHH
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLR---LRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 449 (480)
..+.+.++.......|.. .+..|....+ .-|...++......+|.++||.+.|.+.+..|+.|...+.++..++-.
T Consensus 369 ~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 369 FGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred HHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHH
Confidence 233333333444444544 4555544444 668889999999999999999999999999999998888888877766
Q ss_pred HhcCC
Q 011657 450 AFIFX 454 (480)
Q Consensus 450 ~~~~~ 454 (480)
-+..+
T Consensus 448 pvl~l 452 (464)
T KOG3764|consen 448 PVLLL 452 (464)
T ss_pred HHHHH
Confidence 55443
No 86
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=2.7e-22 Score=215.40 Aligned_cols=309 Identities=14% Similarity=0.021 Sum_probs=201.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH---HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------
Q 011657 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------ 163 (480)
Q Consensus 93 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------ 163 (480)
....++..+++.+++.++++++|+++||+|||+++.. ..++..+..+.+...+|+++++++|+++|++.+.
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence 3567889999999999999999999999999997533 3333333334444558999999999999999887
Q ss_pred ----------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhccccc
Q 011657 164 ----------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRK 215 (480)
Q Consensus 164 ----------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~ 215 (480)
+|+.+++++.... +|++.|+..++..++.++..+++|+++.- .++ .+
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~ 205 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGWLASLFIPKTGNA--APD--LK 205 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCC--Ce
Confidence 7888888887765 99999955555555555666667765320 000 00
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHH
Q 011657 216 GDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLY 295 (480)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (480)
..... .......++.+.+++.++...+...+..+. ...+..
T Consensus 206 -------------------------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 246 (1140)
T PRK06814 206 -------------------------IDRNI----------IRSTITLLKYAKADKRIWLAILGISWFWLV----GAVVLS 246 (1140)
T ss_pred -------------------------eccch----------HHHHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHH
Confidence 00000 000112345566666555544443333322 224445
Q ss_pred hHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHh-------------
Q 011657 296 YAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYY------------- 361 (480)
Q Consensus 296 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~------------- 361 (480)
+.|.++++ .|. +....+++.+...++.+++.++.+++.++..+++.+..+.++.+++.+.+.+..
T Consensus 247 ~~p~~~~~~~g~-~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 247 QLPLLAKETLGG-DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HhHHHHHHHcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 67777665 566 888999999999999999999999999888776665555554444433332210
Q ss_pred --hccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh-hCccHHH
Q 011657 362 --LFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL-LGAGILF 438 (480)
Q Consensus 362 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~g~~~~~ 438 (480)
.....+.+...+..++++.+.+ ...+...+++.+..|++.+|+++|+.+++..++..+++.+.+.+.+. .++...+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~ 404 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGG-LYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWII 404 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHH-HhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 0001233333333333333333 33344568999999999999999999999999999999999988753 3445455
Q ss_pred HHHHHHHHH
Q 011657 439 YAFGVIAVL 447 (480)
Q Consensus 439 ~~~~~~~~~ 447 (480)
++.+.+.++
T Consensus 405 ~~~~~~~~~ 413 (1140)
T PRK06814 405 LFIALANLI 413 (1140)
T ss_pred HHHHHHHHH
Confidence 544444333
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.90 E-value=6.8e-21 Score=165.83 Aligned_cols=331 Identities=22% Similarity=0.203 Sum_probs=241.0
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
.+..+...-..+.++|.++++.+| +|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++..+|
T Consensus 18 vlia~NLR~~itsvgPLL~~Ir~~-------~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 18 VLIAFNLRPAITSVGPLLDEIRQD-------LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred HHHHhccchhhhhhhhhHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 333355555677889999999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHhH-----------------------------hHHhhhhh----hhhhhhhhHHHHh
Q 011657 138 ALVTALAPDFIIMVVGRFVFGIGIGL-----------------------------GGYGIGSL----LVDLVAGWRYMYG 184 (480)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~g~g~-----------------------------~g~~~g~~----l~~~~~~wr~~f~ 184 (480)
.++-... +...++.+-.+.|.|.+. +|..++.. +.+...+||....
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~ 169 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALG 169 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHH
Confidence 9998887 888889999999998887 33333333 3334457999999
Q ss_pred chhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHH
Q 011657 185 ASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR 264 (480)
Q Consensus 185 ~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (480)
+-+.++++.++.++.-...++ . ...+.+..+..
T Consensus 170 ~WAl~allAl~~WlPq~~r~~-----~------------------------------------------~~~~~~~~~~~ 202 (395)
T COG2807 170 FWALLALLALLIWLPQALREQ-----A------------------------------------------ASIATKLVSVR 202 (395)
T ss_pred HHHHHHHHHHHHHhhhccccc-----c------------------------------------------ccccccccccc
Confidence 999999887776654321100 0 00122233445
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc-CchHH
Q 011657 265 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG-RRPLL 343 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~ 343 (480)
+++|++.-|.+.+.+.+..+ .++....|+|.++.+.|. |..+++.+.+...+..++..+....+.+|.. +|+..
T Consensus 203 ~vw~~~~aW~vtLfmGlqS~----~~Y~~~~WLP~ili~~G~-sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~ 277 (395)
T COG2807 203 KVWRSPLAWQVTLFMGLQSL----LYYIVIGWLPAILIDRGL-SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLV 277 (395)
T ss_pred ccccCchhHHHHHHHHhhHH----HHHHHHHHHHHHHHHcCC-CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 67888877766655444444 345777899999999999 9999999999999999999999999999764 56666
Q ss_pred HhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccC-ChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 344 LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVF-PLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
.....++.++.+.+.+. +....+++ ..+++.+.+ +..|+..+.+.+.. .++..+.-.|+.+.++++-.++||
T Consensus 278 ~~~~~~~l~G~~G~~~~---P~~~~~lw---~~llG~G~G-~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP 350 (395)
T COG2807 278 VLALLLMLVGLVGLLLA---PGQLPILW---ALLLGLGQG-GAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGP 350 (395)
T ss_pred HHHHHHHHHHHHHHHHh---hhhHHHHH---HHHHhCccc-hHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhh
Confidence 66666677776665432 22233333 122222222 22344445555543 446677888899999999999999
Q ss_pred hcchhhHHhhC-ccHHHHHHHHHHHHHHHhcCCC
Q 011657 423 FAFSPLKDLLG-AGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 423 ~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
.++|.+.|..| |...+..++.+.++..+..+..
T Consensus 351 ~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 351 WLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred hhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999887 5555666666666655555543
No 88
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=6.7e-22 Score=213.22 Aligned_cols=307 Identities=18% Similarity=0.096 Sum_probs=196.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH---HhcCchHHHHHHHHHHHHHHhH-----
Q 011657 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 92 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
+....+++.+++.+++.++++++|+++||+|||++++++.++..++.++. ..+++++.++++|+++|++.+.
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 44568999999999999999999999999999999999887766555544 4457899999999999999887
Q ss_pred -----------------------------hHHhhhhhhhhh--------hhhhHHHHhchhHHHH-HHHHHHhcccCchH
Q 011657 164 -----------------------------GGYGIGSLLVDL--------VAGWRYMYGASTPLAV-IMGMGMWWLPASPR 205 (480)
Q Consensus 164 -----------------------------~g~~~g~~l~~~--------~~~wr~~f~~~~~~~~-~~~~~~~~~~e~p~ 205 (480)
+|+.+++++... ..+|++.+.+..+... +.++..+.+||+|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 566666666554 2245555544444333 34445556777653
Q ss_pred HHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHH
Q 011657 206 WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQ 285 (480)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (480)
....+. + .... .. .......++.+++++..+..++...+.++.
T Consensus 205 ~~~~~~-----------~------------~~~~---~~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 247 (1146)
T PRK08633 205 AAPEVF-----------D------------KKKY---LF-----------PKLLWRNLKLLRSDRVLWLAIIGLSYFWFI 247 (1146)
T ss_pred CCcccc-----------c------------cccc---cc-----------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 210000 0 0000 00 000112344555655555444433333322
Q ss_pred HhhChhHHHHhHHHHH-HhcCCCCCc-chHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhc
Q 011657 286 QITGQPSVLYYAASIL-QSAGFSAAS-DATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLF 363 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (480)
. .....+.|.++ +..|. +.. ..+++.+...++.+++.++.+++.||+++++.+.++.++.+++.+++...
T Consensus 248 ~----~~~~~~~~~~~~~~~g~-s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--- 319 (1146)
T PRK08633 248 S----QLAQANFPAYAKEVLGL-DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--- 319 (1146)
T ss_pred H----HHHHHhhHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh---
Confidence 1 23334455554 45677 677 88999999999999999999999999999888877777666666555431
Q ss_pred cCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC--ccHHHHHH
Q 011657 364 LDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG--AGILFYAF 441 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g--~~~~~~~~ 441 (480)
.+.+..++..++++.+.+. ..+...+++.+..|++.||+++|+.+++..++.++++.+.+.+.. .+ +...+++.
T Consensus 320 --~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~ 395 (1146)
T PRK08633 320 --PSLASVLVLFFLFGFSAGL-FIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLI 395 (1146)
T ss_pred --hhHHHHHHHHHHHHHHHHH-hhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHH
Confidence 2233333333333333333 334455788899999999999999999999998877766655443 33 33344444
Q ss_pred HHHHHH
Q 011657 442 GVIAVL 447 (480)
Q Consensus 442 ~~~~~~ 447 (480)
+.+.++
T Consensus 396 ~~~~~~ 401 (1146)
T PRK08633 396 ALVTLI 401 (1146)
T ss_pred HHHHHH
Confidence 444433
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.89 E-value=1.1e-21 Score=189.31 Aligned_cols=295 Identities=15% Similarity=0.109 Sum_probs=192.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhH-HHHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRR-ELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (480)
+|+++.++|++.++..+..++..|+.|+++|| +|||| .++++.+.++++.+++...++ ...+++.+++.
T Consensus 30 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (437)
T TIGR00792 30 LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILL 109 (437)
T ss_pred cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999997 68744 677888888888888877765 34566677888
Q ss_pred HHHHhH-------------------------------hHHhhhhhh----hh------hhhhhHHHHhchhHHHHHHHH-
Q 011657 158 GIGIGL-------------------------------GGYGIGSLL----VD------LVAGWRYMYGASTPLAVIMGM- 195 (480)
Q Consensus 158 G~g~g~-------------------------------~g~~~g~~l----~~------~~~~wr~~f~~~~~~~~~~~~- 195 (480)
+++.+. +|..+++.+ .. ...+||+.+++.++++++..+
T Consensus 110 ~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 110 GLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLII 189 (437)
T ss_pred HHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 877654 232222221 11 123899999999888877444
Q ss_pred HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 196 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 196 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
..+..+|+++.. . . .++++.+....++++++++.++..
T Consensus 190 ~~~~~~e~~~~~---~--------------------------~-------------~~~~~~~~~~~~~~l~~~~~~~~~ 227 (437)
T TIGR00792 190 CFFGTKERYSEI---P--------------------------K-------------NIEKKLSLKQIFKALFKNDQLLIL 227 (437)
T ss_pred HHcCCEecCCCC---C--------------------------c-------------ccccCCCHHHHHHHHhCCHHHHHH
Confidence 445566653100 0 0 000001112234566666655554
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
.+...+..... .....+.+++.+.... +....+.......++.+++.++.+++.||+|+|+.+..+..+.+++.+
T Consensus 228 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 228 CLAYLFYNLAF----NIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYL 302 (437)
T ss_pred HHHHHHHHHHH----HHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 44333332222 2222334444443322 455667777778899999999999999999999999888877777665
Q ss_pred HHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCC-------hhhhhhHHHHHHHHHHHHHHhHhhcchhh
Q 011657 356 LLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFP-------LRLRGRGLSVAVLVNFGANALVTFAFSPL 428 (480)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 428 (480)
.+.+. .++.+...+...+...+.+ ...+..+++..|..+ ++.+|.+.|+.+++..++..+++.+.|.+
T Consensus 303 ~~~~~----~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 303 IFFFA----GSNLPLILVLIILAGFGQN-FVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHc----chhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54331 1222222332233222222 233455567777654 56689999999999999999999999999
Q ss_pred HHhhCcc
Q 011657 429 KDLLGAG 435 (480)
Q Consensus 429 ~~~~g~~ 435 (480)
.+..|+.
T Consensus 378 l~~~G~~ 384 (437)
T TIGR00792 378 LGIIGYV 384 (437)
T ss_pred HHHcCCC
Confidence 9887763
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.89 E-value=6.3e-21 Score=180.78 Aligned_cols=338 Identities=16% Similarity=0.016 Sum_probs=209.4
Q ss_pred HHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHH--HHHHHHHHHHHHHHHH-HHHhhhhhhHHHHHHHH
Q 011657 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI--TSGSLYGALIGSILAF-NIADILGRRRELILAAL 132 (480)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~ 132 (480)
.+..-++..|...+...+.+|.+.+| .|.+..++|++ .+.+.+...+.+++++ +..||+||||..++.+.
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~-------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~ 77 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLRE-------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQ 77 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHH
Confidence 34555678888888889999999988 89999999997 4677888888888884 47999999998766553
Q ss_pred HH-HHHHHHHH-h--cCc-hHHHHHHHHHHHHHHhH------------------------------hHHhhhhh----hh
Q 011657 133 LY-LVGALVTA-L--APD-FIIMVVGRFVFGIGIGL------------------------------GGYGIGSL----LV 173 (480)
Q Consensus 133 ~~-~~~~~~~~-~--~~~-~~~l~~~r~l~G~g~g~------------------------------~g~~~g~~----l~ 173 (480)
+. +......+ + ..+ ...++..-++.++..+. +|+.+|+. +.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~ 157 (390)
T TIGR02718 78 CLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF 157 (390)
T ss_pred HHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 21222222 1 222 22333333444333333 46666653 33
Q ss_pred hhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhh
Q 011657 174 DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 253 (480)
Q Consensus 174 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (480)
+.. +||..|++.+++.++..+..++++|+++. ++ +
T Consensus 158 ~~~-gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~-----------~------------------------------ 192 (390)
T TIGR02718 158 GKF-GQRPAFLLVACVPLASLVCVLWLKDRAVA---SP-----------E------------------------------ 192 (390)
T ss_pred HHh-CHHHHHHHHHHHHHHHHHHHHHcCCCCcC---cc-----------c------------------------------
Confidence 444 99999999998887755555555443210 00 0
Q ss_pred cccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHH-HHHHHHHHHHH
Q 011657 254 YVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGL-FKLIMTGLAVL 332 (480)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~ 332 (480)
.++++..+.++.+|++..+......++..... .....+.+.++++.|+ ++++.+......++ ..+++.++.|+
T Consensus 193 -~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~l~~~G~-s~~~ig~~~~~~~~~~~~~g~~~~g~ 266 (390)
T TIGR02718 193 -APLARRASLFRFFRRPLAWSLLALALLSAMTA----VSGFGLSKLYLVDAGW-PLEWIGRLGMAGGAVTVLLGCGGGAW 266 (390)
T ss_pred -cchhhHHHHHHHHcCcCHHHHHHHHHHHHHHH----HHHHHHhhHHHHhcCC-CHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 00001123566777766555444333333222 2333355667778888 88888888877764 66677899999
Q ss_pred HHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH-HHHhcccccccceeecccCCh-hhhhhHHHHH
Q 011657 333 VVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYV-GCYQLSFGPIGWLMISEVFPL-RLRGRGLSVA 410 (480)
Q Consensus 333 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 410 (480)
+.||+|+|+.+..+..+..+.........................+. ...+... +..++...+..++ +.+++.+++.
T Consensus 267 l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~ 345 (390)
T TIGR02718 267 LVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITS-VAIYTAFMRFAGDGDQAGTDVTAV 345 (390)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcccchHHHHHHH
Confidence 99999999988876665533322221111100011111111221221 1122222 2333454455554 8899999999
Q ss_pred HHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 411 VLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 411 ~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
+...++|..++|.+.|.+.|..|+...|.+.+++.+++.+..
T Consensus 346 ~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 346 QSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999888888777777665543
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=1.5e-21 Score=188.02 Aligned_cols=351 Identities=12% Similarity=0.064 Sum_probs=200.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcCchHH-HHHHHHHHHHHHhH---
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFII-MVVGRFVFGIGIGL--- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~g~g~--- 163 (480)
+|.+..+.+++.+.+.....+..+++|+++|| +||||+++++.+++++++++++++++... ++++|+++|+|.|.
T Consensus 45 lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~ 124 (489)
T PRK10207 45 LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKA 124 (489)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccC
Confidence 89999999999999999999999999999999 99999999999999999999999887554 55899999999887
Q ss_pred ---------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHh
Q 011657 164 ---------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 210 (480)
Q Consensus 164 ---------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 210 (480)
+|+.+++++.+.. |||+.|++.++..++.++.+.+.++..+ .+
T Consensus 125 ~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~~F~i~~i~~~~~~~~~~~~~~~~~---~~ 200 (489)
T PRK10207 125 NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSVTYNLCGAGLIIALLVYFACRGMVK---DI 200 (489)
T ss_pred CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHHHHHcchhhc---cc
Confidence 6677777777766 9999999875533333333433332211 11
Q ss_pred ccccc---CchhhhHHHHHH------HHHHHhCCCCCCCChhhHHHHH----Hh---hhcccccccccHHHHhhhhhhhH
Q 011657 211 AMKRK---GDMQDLRESAIS------CLCRLRGQSIGDSAPTEVDEIL----TE---LSYVGEDKEVSLREVFHGKCLKA 274 (480)
Q Consensus 211 ~~~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~ 274 (480)
+.+++ .|..+...-... ....... ..+ ........ .. ...+.+. .+.+|++.+..
T Consensus 201 ~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~i~~~~f~~~~~~~-----~~~~r~r~~~~ 271 (489)
T PRK10207 201 GSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMH--NVE--VANLVLIVLSIVVTIIFFREAFKL-----DKTGRNKMFVA 271 (489)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHHHHHHh--hhh--HHHHHHHHHHHHHHHHHHHHHhcC-----CHHHHHHHHHH
Confidence 00010 111010000000 0000000 000 00000000 00 0000111 13444433222
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCC---CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH-------H
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQS-AGFS---AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL-------L 343 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~ 343 (480)
..+. +.....+..+....+..+.+.++ .+.. -......+.....+..++..++.+++.||+++|+. +
T Consensus 272 ~~l~--~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~ 349 (489)
T PRK10207 272 FVLM--LEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKF 349 (489)
T ss_pred HHHH--HHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHH
Confidence 2111 11111111111222333444432 2110 01123445555666777888888999999998863 6
Q ss_pred HhhhHHHHHHHHHHHHH---hhcc-CCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHH
Q 011657 344 LGGVSGIVISLFLLGSY---YLFL-DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANA 419 (480)
Q Consensus 344 ~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 419 (480)
.+|+++.+++++.+... .... ...+.+.++...++.+.......|....++.+..|++.++.++|+.+....+|+.
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~ 429 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL 429 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 66777777666543211 1111 1223333334444444444445566678899999999999999999999999999
Q ss_pred hHhhcchhhHH----------hhCccHHHHHHHHHHHHHHHhcCC
Q 011657 420 LVTFAFSPLKD----------LLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 420 i~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
++..+...... ...+.+.|...++.++++.++.+.
T Consensus 430 lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 430 LGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 98877654421 112345666666666655555544
No 92
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=3.2e-20 Score=173.17 Aligned_cols=332 Identities=17% Similarity=0.163 Sum_probs=226.2
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhcCch
Q 011657 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-RRRELILAALLYLVGALVTALAPDF 147 (480)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~~~~~~~~~ 147 (480)
+...|.++..-++ .|.|..|+|.+.+...+...++++++|.++||++ +|+++.+..++.++........+++
T Consensus 19 G~~~p~~~~~L~~-------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f 91 (400)
T PF03825_consen 19 GAFLPYLPLYLES-------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSF 91 (400)
T ss_pred HHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3445555655555 7899999999999999999999999999999986 6778888888888877788888999
Q ss_pred HHHHHHHHHHHHHHhH----------------------------hHHhhhhhh-----hhhh--hhhHHHHhchhHHHHH
Q 011657 148 IIMVVGRFVFGIGIGL----------------------------GGYGIGSLL-----VDLV--AGWRYMYGASTPLAVI 192 (480)
Q Consensus 148 ~~l~~~r~l~G~g~g~----------------------------~g~~~g~~l-----~~~~--~~wr~~f~~~~~~~~~ 192 (480)
+.+++.-++..+.... +|..++++. .... .+..+.+++.++.+++
T Consensus 92 ~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l 171 (400)
T PF03825_consen 92 WWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLL 171 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHH
Confidence 9888887777776544 666666432 1111 1223455666666555
Q ss_pred HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhh
Q 011657 193 MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 272 (480)
Q Consensus 193 ~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (480)
.....+.+|+.|+....+ +..++....+..+++|+|..
T Consensus 172 l~~~~l~lp~~~~~~~~~------------------------------------------~~~~~~~~~~~~~llk~~~~ 209 (400)
T PF03825_consen 172 LAGFALFLPKTPPKRSAK------------------------------------------ESVKKLLGLDALKLLKNPRF 209 (400)
T ss_pred HHHHHHhCCCCccccccC------------------------------------------CCcccccchHHHHHhcCccH
Confidence 555566678776200000 00011112233467777766
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHH
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 352 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 352 (480)
...++..++... .......|.+.++++.|..+....+...++..+++++.-...+++..|+|.|+++.++.+..++
T Consensus 210 ~~Fll~~~l~~~----~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 210 LVFLLAAFLIGI----SHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAV 285 (400)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 554444333332 2345666778888998832667778888889999999999999999999999999999988888
Q ss_pred HHHHHHHHhhccCCchhHHHHHHH----HHHHHHhcccccccceeecccCChhhhhhHHHHHHHH-HHHHHHhHhhcchh
Q 011657 353 SLFLLGSYYLFLDDVPAVAVVALL----LYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV-NFGANALVTFAFSP 427 (480)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~g~~i~~~~~~~ 427 (480)
=..++... .++.+....... +.+..++... .....++.+..|++.|+++.++++.. ..+|..+|..+.|+
T Consensus 286 R~~l~a~~----~~~~~~~~~~~~l~q~lhG~tf~~~~-~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 286 RWLLYAYF----SDPWPFIVALQLLGQLLHGLTFGLFH-AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HHHHHHHh----cCCcHHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 87776542 122222222222 2333344333 34448999999999999999999886 57999999999999
Q ss_pred hHHhhCccH------HHHHHHHHHHHHHHhcCCCCCC
Q 011657 428 LKDLLGAGI------LFYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 428 ~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~ 458 (480)
+.|+.|.+. .+.+.+++.++..++.+++.||
T Consensus 361 l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 361 LYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999988654 3445555555555554444443
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.87 E-value=6.2e-20 Score=176.69 Aligned_cols=392 Identities=13% Similarity=0.079 Sum_probs=222.9
Q ss_pred ccchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 011657 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR 123 (480)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr 123 (480)
..+|......+.+...+...++ ++...+.+.++ +|++..+.+++.++. .....++++.|+++||+||
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~-----fsv~s~~L~~~-------lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~ 90 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYA-----FNLISGAMQAR-------YNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGP 90 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-------hCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc
Confidence 3445444444333333333333 33445666666 999999999998874 4556788899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhc------CchHHHHHHHHHHHHHHhH-----------------------------hHHhh
Q 011657 124 RRELILAALLYLVGALVTALA------PDFIIMVVGRFVFGIGIGL-----------------------------GGYGI 168 (480)
Q Consensus 124 r~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~g~g~-----------------------------~g~~~ 168 (480)
|+++.++.+++++++++++++ ++++.+.+.|+++|+|.+. +|..+
T Consensus 91 R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 91 RPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997 6899999999999999875 33322
Q ss_pred hhhhhh--hhhhhHHHHhchhHHHHHHH-HHHhcc--cCchHHHHHhcccccCchh-----------------h------
Q 011657 169 GSLLVD--LVAGWRYMYGASTPLAVIMG-MGMWWL--PASPRWLLLCAMKRKGDMQ-----------------D------ 220 (480)
Q Consensus 169 g~~l~~--~~~~wr~~f~~~~~~~~~~~-~~~~~~--~e~p~~~~~~~~~~~~~~~-----------------~------ 220 (480)
.+.+.. ...+|+..|++.+++.++.. +..+++ |+.|++..++++..+.+.. .
T Consensus 171 ~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~ 250 (591)
T PTZ00207 171 LGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFV 250 (591)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHH
Confidence 111111 12378888888888877743 334444 4444443221100000000 0
Q ss_pred ----------------------hHH-HHHHH--H--H-----------HHhCCCCCCCChh----hHH--HHHHhhhc--
Q 011657 221 ----------------------LRE-SAISC--L--C-----------RLRGQSIGDSAPT----EVD--EILTELSY-- 254 (480)
Q Consensus 221 ----------------------~~~-~~~~~--~--~-----------~~~~~~~~~~~~~----~~~--~~~~~~~~-- 254 (480)
+.. ..... + . .....++.++.+. ..+ ....+.+.
T Consensus 251 i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (591)
T PTZ00207 251 ILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKV 330 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccccccccccccccccccc
Confidence 000 00000 0 0 0000000000000 000 00000000
Q ss_pred -------ccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhc-CCCCCcc--hHHHHHHHHHHHH
Q 011657 255 -------VGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASD--ATRVSILLGLFKL 324 (480)
Q Consensus 255 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~--~~~~~~~~~~~~~ 324 (480)
...+...++.+.+++..+|.+++..++.... ...+...+.++.+.. |. +.++ ...+.++.++++.
T Consensus 331 ~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~----gl~~~~N~~qI~~sl~g~-~~~~~~~~~~vsL~si~~~ 405 (591)
T PTZ00207 331 VETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGA----HFVIIFNARFIYTALAGE-APDDALNTLLTVLNGVGSA 405 (591)
T ss_pred ccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCc----hheeeecHHHHHHHhcCC-CCCccceeeehhhhhHHHH
Confidence 0011112666777777777666544443332 234455667777888 55 2322 3337899999999
Q ss_pred HHHHHHHHHHhhhcCc--------hHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecc
Q 011657 325 IMTGLAVLVVERLGRR--------PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISE 396 (480)
Q Consensus 325 ~~~~~~g~l~d~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+|++..|.+.....+| +..+....++.++.+++.+. ......++..++.+.+.+..+ ++....++|
T Consensus 406 ~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~-----~p~~~L~~~~~lvg~~~G~~~-~~~~~i~se 479 (591)
T PTZ00207 406 VGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT-----LPKAALPLPYFIAAFANGFMA-ATIALVTRT 479 (591)
T ss_pred hhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH-----CCccHhHHHHHHHHHHhhHhH-HHHHHHHHH
Confidence 9999999887322222 12222222233333333321 111234444444444544444 455589999
Q ss_pred cCChhhhhhHHHHHHHHHHHHHHhH-hhcchhhHHhhC-------------ccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 397 VFPLRLRGRGLSVAVLVNFGANALV-TFAFSPLKDLLG-------------AGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 397 ~~p~~~~~~~~~~~~~~~~~g~~i~-~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
+|. ++-|+-.-+.....-+|..+. ..++|.++|+.. ++.+|+++++++.++.+....+..+++
T Consensus 480 lFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 480 IFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred Hhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 999 888877777776677777666 557788887522 456899999998888887666554443
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=9.4e-21 Score=165.30 Aligned_cols=323 Identities=19% Similarity=0.137 Sum_probs=192.5
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------
Q 011657 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------ 163 (480)
Q Consensus 90 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------ 163 (480)
+.+..-.|.+.+.|.+.+.+.++.+|.++||||||+++.++++..++..++.++++|+..+.+.|++.|+..|.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rA 143 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRA 143 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHH
Confidence 44677889999999999999999999999999999999999999999999999999997777779999998877
Q ss_pred ---------------------------hHHhhhhhhhhhh-hhhHHHHh----chhHHHHH-HHHHHhcccCchHHHHHh
Q 011657 164 ---------------------------GGYGIGSLLVDLV-AGWRYMYG----ASTPLAVI-MGMGMWWLPASPRWLLLC 210 (480)
Q Consensus 164 ---------------------------~g~~~g~~l~~~~-~~wr~~f~----~~~~~~~~-~~~~~~~~~e~p~~~~~~ 210 (480)
+||.+|+++.... ..=+.+|. +..+++.. .....+++||+-...+++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~ 223 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN 223 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc
Confidence 8888888887611 01112222 22223333 445667789983211111
Q ss_pred cccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhH---HHHHHHHHHHHHh
Q 011657 211 AMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA---LIIGAGLVLFQQI 287 (480)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 287 (480)
+.+.+ .+++....... .+..+......++++.... .+-.+.+..+...
T Consensus 224 --~~~~~----~~~~~~~~~~~-----------------------~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~ 274 (451)
T KOG2615|consen 224 --DEHST----LQEAADDRLAL-----------------------LKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYL 274 (451)
T ss_pred --ccccc----hhhhhhhhhhh-----------------------cchhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 00000 00000000000 0000000011112211111 1111111112111
Q ss_pred hChhHHHHhHHHH-HHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc--CchHHHhhhHHHHHHHHHHHHHhhcc
Q 011657 288 TGQPSVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG--RRPLLLGGVSGIVISLFLLGSYYLFL 364 (480)
Q Consensus 288 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (480)
..+..+.++...+ .+..|+ ++.+.|.+.+..++.+.+......+..||.+ .+-.+..+..++.-.++++..
T Consensus 275 ~l~s~~~~t~~~l~~~rfg~-ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~----- 348 (451)
T KOG2615|consen 275 ELFSGLENTVLFLTHGRFGY-SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSL----- 348 (451)
T ss_pred HHHHHHHhhHHHhhcCccCC-ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhc-----
Confidence 1122333333333 255778 8889999999998888888887777777766 444454444444444443332
Q ss_pred CCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-CccHHHHHHHH
Q 011657 365 DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-GAGILFYAFGV 443 (480)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-g~~~~~~~~~~ 443 (480)
...+........+..+..... .+....++....|.++||+.+|+....+.++-++||.+.|.+..+. +-+..+...+.
T Consensus 349 ~~~~~~l~~~s~l~sf~~A~~-vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~ 427 (451)
T KOG2615|consen 349 ARTPVVLYLGSTLKSFSTASV-VTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGA 427 (451)
T ss_pred cccchhhhHHHHHHHHHHHHh-hHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHH
Confidence 223333333333333333333 3444578888999999999999999999999999999998877642 22333333333
Q ss_pred HHHHH
Q 011657 444 IAVLS 448 (480)
Q Consensus 444 ~~~~~ 448 (480)
+.++.
T Consensus 428 L~~~~ 432 (451)
T KOG2615|consen 428 LLLIP 432 (451)
T ss_pred HHHHH
Confidence 33333
No 95
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.87 E-value=1.6e-20 Score=175.89 Aligned_cols=294 Identities=13% Similarity=0.051 Sum_probs=184.5
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhHH-HHHHHHHHHHHHHHH
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAALLYLVGALVT 141 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~~~ 141 (480)
....++.+|.+.+| +|+|..+.+++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 4 LGLVGNTLPYWLRS-------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred chhHHhHHHHHHHH-------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 34566778888877 89999999999755 555555 99999999998 89887 567788888887777
Q ss_pred Hhc---CchHHHHHHHHHHHHHHhH----------------------------------hHHhhhhhhhhhhhh------
Q 011657 142 ALA---PDFIIMVVGRFVFGIGIGL----------------------------------GGYGIGSLLVDLVAG------ 178 (480)
Q Consensus 142 ~~~---~~~~~l~~~r~l~G~g~g~----------------------------------~g~~~g~~l~~~~~~------ 178 (480)
++. .+.+.+....++.+++.+. +|+.+++.+.+.. +
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~~~~ 153 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANTGLI 153 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccccc
Confidence 777 4556667777777776654 3444444443443 5
Q ss_pred --hHHHHhchhHHHHHHHHHHh-cccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcc
Q 011657 179 --WRYMYGASTPLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 255 (480)
Q Consensus 179 --wr~~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (480)
||..|++.++..++..+..+ ..||+++. . .+ . +.+
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~----~----~~---~--------------------~~~----------- 191 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKEPQED----A----SV---P--------------------KPL----------- 191 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCCCcc----c----cc---c--------------------hhH-----------
Confidence 99999999888777555444 35664210 0 00 0 000
Q ss_pred cccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHH-HHHHHHHHHHHHHH
Q 011657 256 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLG-LFKLIMTGLAVLVV 334 (480)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~ 334 (480)
+++.+..++++++++..+..........+.. ........+.|.++++.|+ +..+.+......+ +..+++.++++++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~-~~~~~g~~~~~~~~~~~~~g~~~~g~l~ 269 (356)
T TIGR00901 192 TQAVLKPIREFFQRKNMIQALLLLLLIVLYK-LGDSAATVLTTLFLLDMGF-SKEEIALVAKINGLLGAILGGLIGGIIM 269 (356)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCC-CHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 0001123455666554222322222222222 2233455567777777888 7778777776655 67789999999999
Q ss_pred hhhcCchHHHhhhHHHHHHHHHHHHHhhccC-C----chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHH
Q 011657 335 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-D----VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSV 409 (480)
Q Consensus 335 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 409 (480)
||+|+|+.+..+.++.+++..++.+...... . ...+.+....++.........+...++..|.+|+++||+.+|+
T Consensus 270 ~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 349 (356)
T TIGR00901 270 QPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMAL 349 (356)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 9999999888877777666554433211100 0 1222222223232332233345556899999999999999999
Q ss_pred HHHHHH
Q 011657 410 AVLVNF 415 (480)
Q Consensus 410 ~~~~~~ 415 (480)
.++..+
T Consensus 350 ~~~~~~ 355 (356)
T TIGR00901 350 LSSLSA 355 (356)
T ss_pred HHHHHh
Confidence 987654
No 96
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.86 E-value=1.2e-19 Score=174.98 Aligned_cols=379 Identities=12% Similarity=0.048 Sum_probs=215.1
Q ss_pred hcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHH
Q 011657 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALV 140 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~ 140 (480)
+...+......+.+|....+. ..+|.+..+.+++.+.+.+++.++++++|+++|| +|||+++.++.++++++.++
T Consensus 20 ~~~~~~~~~~~~~L~~yl~~~----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~ 95 (475)
T TIGR00924 20 LWERFSYYGMQGILAVYLVQQ----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFM 95 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 333444444455555553321 0178999999999999999999999999999999 89999999999999999999
Q ss_pred HHhcCchHHHHHHHHHHHHHHhH-------------------------------------hHHhhhhhhhhhhhhhHHHH
Q 011657 141 TALAPDFIIMVVGRFVFGIGIGL-------------------------------------GGYGIGSLLVDLVAGWRYMY 183 (480)
Q Consensus 141 ~~~~~~~~~l~~~r~l~G~g~g~-------------------------------------~g~~~g~~l~~~~~~wr~~f 183 (480)
.+++++++.++++|++.|+|.|. +|+.+++.+.+.. +||+.|
T Consensus 96 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f 174 (475)
T TIGR00924 96 LAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGF 174 (475)
T ss_pred HHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHH
Confidence 99999999999999999998876 5666666665554 899999
Q ss_pred hchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHH----------HHH-HhCCCCCCCChhhHHH---H-
Q 011657 184 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISC----------LCR-LRGQSIGDSAPTEVDE---I- 248 (480)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~---~- 248 (480)
++.++..++..+.+++.++..+ ..+.+++...+++.+..... ... ....+.. ....... .
T Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 249 (475)
T TIGR00924 175 NLAAVGMVIGLLTFFAGRHMLR---DIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVV--IANILLMTVTLA 249 (475)
T ss_pred HHHHHHHHHHHHHHHHcccccc---cCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHH
Confidence 9988655554443333332110 00000000000000000000 000 0000000 0000000 0
Q ss_pred -HHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCC---CCcchHHHHHHHHHHH
Q 011657 249 -LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFS---AASDATRVSILLGLFK 323 (480)
Q Consensus 249 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~ 323 (480)
.........++..+ +.-+++.. . ++.+.+.....+..+.-.....+.+.++ .+.. -....+++.+...+..
T Consensus 250 ~~~~~~~~~~~~~~~--~~~~~~~~-~-~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~i 325 (475)
T TIGR00924 250 VIIFFFRLAFKPRLD--AVARNKMY-A-YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWV 325 (475)
T ss_pred HHHHHHHHHHhccCC--HHHHhHHH-H-HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHH
Confidence 00000000000001 11111111 1 1111121111112222222223333332 2220 1122667788888888
Q ss_pred HHHHHHHHHHHhhhcC-----chHH--HhhhHHHHHHHHHHHHHhhc-c--CCchhHHHHHHHHHHHHHhccccccccee
Q 011657 324 LIMTGLAVLVVERLGR-----RPLL--LGGVSGIVISLFLLGSYYLF-L--DDVPAVAVVALLLYVGCYQLSFGPIGWLM 393 (480)
Q Consensus 324 ~~~~~~~g~l~d~~g~-----~~~~--~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (480)
++..++..++-.|.+| +... .+|+++.++++..+.+.... . ...+.++++...++.+.......|...++
T Consensus 326 il~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~ 405 (475)
T TIGR00924 326 VVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSW 405 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 8887776554444443 2333 56777777776665432111 0 12234444444444444455556788899
Q ss_pred ecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 394 ISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 394 ~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
+.+..|++.||+.+|+......+|..+++.+.+...+..++...|...++++++..++.++
T Consensus 406 ~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 406 WTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988887777667777777777766666665544
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.86 E-value=4.7e-21 Score=189.72 Aligned_cols=341 Identities=13% Similarity=0.156 Sum_probs=220.8
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 137 (480)
++..+......+..+.+++.++++ |+++..+.|++.+.+.++++++.++.|+++||+|||+.+.+++++++++
T Consensus 39 ~~~~~~~~~~~g~~~~~l~~iek~-------F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSSLTTIERR-------FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHHHHHhhchhhhhh-------hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH
Confidence 445555556678888999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcC---------------------------------------------------chHHHHHHHHHHHHHHhH---
Q 011657 138 ALVTALAP---------------------------------------------------DFIIMVVGRFVFGIGIGL--- 163 (480)
Q Consensus 138 ~~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~g~g~--- 163 (480)
++++++.+ .+..++++|+++|+|.+.
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 99988763 245778999999999887
Q ss_pred -------------------------------hHHhhhhhhhhhh---------------------hhhHHHHhchhHHHH
Q 011657 164 -------------------------------GGYGIGSLLVDLV---------------------AGWRYMYGASTPLAV 191 (480)
Q Consensus 164 -------------------------------~g~~~g~~l~~~~---------------------~~wr~~f~~~~~~~~ 191 (480)
+|+++|+.+.... ..||..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 5555555554321 137888998888888
Q ss_pred HHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhh
Q 011657 192 IMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC 271 (480)
Q Consensus 192 ~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (480)
+..+.++++|++.+....+. +. +.++... .. ...... .... ....++.....+.+++++.
T Consensus 272 l~~v~l~~~p~~lp~~~~~~-----~~--~~~~~~~----~~-~~~~~~-~~~~-------~~~~~~~~~~~~~Ll~n~~ 331 (633)
T TIGR00805 272 LTSIPFFFFPKALPKEGKRV-----NV--DVHETEK----LE-KSEDKS-RKKN-------SDITKDFPKIIKRLLCNPI 331 (633)
T ss_pred HHHHHHHhCccccCCccccc-----ch--hhhhhhc----cc-cccccc-chhh-------hhhHHHHHHHHHHHHcCcH
Confidence 76666666665421000000 00 0000000 00 000000 0000 0000111234556777765
Q ss_pred hhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHH-HHHHHHHHHHHHHhhhcC--chHHHhhh
Q 011657 272 LKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL-FKLIMTGLAVLVVERLGR--RPLLLGGV 347 (480)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~--~~~~~~~~ 347 (480)
++...+...+... ....+..|.|.++++ .|. ++.+++++.....+ +.+++.+++|+++||++. |+.+.+++
T Consensus 332 f~~~~l~~~~~~~----~~~~~~~~lP~yl~~~~g~-s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~ 406 (633)
T TIGR00805 332 YMLVILAQVIDSL----AFNGYITFLPKYLENQYGI-SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAI 406 (633)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC-cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHH
Confidence 5554443333332 334666788888875 666 88888888877776 568999999999999984 45666666
Q ss_pred HHHHHHHHHHHHHh-------------------------h-c-------cC-----------------------------
Q 011657 348 SGIVISLFLLGSYY-------------------------L-F-------LD----------------------------- 365 (480)
Q Consensus 348 ~~~~~~~~~~~~~~-------------------------~-~-------~~----------------------------- 365 (480)
++..+++++....+ . . ..
T Consensus 407 ~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~ 486 (633)
T TIGR00805 407 CLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTG 486 (633)
T ss_pred HHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCC
Confidence 66555544422100 0 0 00
Q ss_pred --------------------------C-ch-hH-HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHH-HH
Q 011657 366 --------------------------D-VP-AV-AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV-NF 415 (480)
Q Consensus 366 --------------------------~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~ 415 (480)
. .. .. .++..++..........|.. ..+-..+|+++|+.+.|+..++ +-
T Consensus 487 ~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~-~i~lR~V~~~~rs~alg~~~~~~rl 565 (633)
T TIGR00805 487 SNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLY-MVLLRVVNPEEKSLAIGLQWLCMRV 565 (633)
T ss_pred CcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchh-eEEeeccCcccchHHhhHHHHHHHH
Confidence 0 01 11 12222222233334445555 6778889999999999999987 56
Q ss_pred HHHHhHhhcchhhHHh
Q 011657 416 GANALVTFAFSPLKDL 431 (480)
Q Consensus 416 ~g~~i~~~~~~~~~~~ 431 (480)
+|.+-+|.++|.++|.
T Consensus 566 lg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 566 FATIPAPILFGLLIDV 581 (633)
T ss_pred hcCCChhHHHhhhhhc
Confidence 7889999999999985
No 98
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4.7e-20 Score=154.12 Aligned_cols=354 Identities=15% Similarity=0.141 Sum_probs=208.4
Q ss_pred HHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHH
Q 011657 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELIL 129 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~ 129 (480)
++++..+|+-.|...+.....+....+...| .+++.++..++.+.|.....+-++++|++.|| +|.|..-++
T Consensus 43 ~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d-------~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii 115 (459)
T KOG4686|consen 43 FMALVFMCLLGFGSYFCYDAPGALQIDFKLD-------SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII 115 (459)
T ss_pred HHHHHHHHHhcccceeecCCchhhhhhhhcc-------cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHH
Confidence 4444556666677777777777767666666 88899999999999999999999999999996 698888887
Q ss_pred HHHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHhH-----------------hHHhhhhhhh-------------hhh
Q 011657 130 AALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGL-----------------GGYGIGSLLV-------------DLV 176 (480)
Q Consensus 130 ~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~g~g~-----------------~g~~~g~~l~-------------~~~ 176 (480)
-++...+|.++.+. ++.+|.++++||+.|+|.-. ++.+.|-.+. +..
T Consensus 116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 77777788877664 68899999999999998766 2222222111 110
Q ss_pred hhhHHHHhchhHHHHHHHHHHhcccCchH------HHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHH
Q 011657 177 AGWRYMYGASTPLAVIMGMGMWWLPASPR------WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 250 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~~~~~~~~~~e~p~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (480)
.+.-.-++-...-.. +..+.+-|... -....+ -.++.|++.+.+-++...+
T Consensus 196 y~~~~~~~~~~ghT~---LG~~l~~~~~tc~~slical~lg--------~~D~rAerilh~e~g~~Ge------------ 252 (459)
T KOG4686|consen 196 YDTMGRMFPGVGHTL---LGLWLCFEVKTCKQSLICALSLG--------LSDDRAERILHLEEGFLGE------------ 252 (459)
T ss_pred HHHHHHhcccchHHH---HHHHHHHHHHHHHHHHHHHHHhh--------hhhhHHHHHHhhhcCcccC------------
Confidence 011001110011111 11111111000 000000 0112222222221111110
Q ss_pred hhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHH
Q 011657 251 ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGL 329 (480)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 329 (480)
..+-.-..-++ +.+|.+.+.+.++....+ -+....|.+++ .+|+ ++..++.+.+.......+.+++
T Consensus 253 -------~pkLtdv~~f~-ppfw~~~iicv~yyva~f----PFi~lg~~fF~~rfGl-S~~~a~~i~s~vy~Isav~spv 319 (459)
T KOG4686|consen 253 -------EPKLTDVNTFY-PPFWVLVIICVLYYVAWF----PFITLGPMFFQKRFGL-SAVSAGNILSTVYGISAVLSPV 319 (459)
T ss_pred -------CcccccccccC-ccHHHHHHHHHHHHHHHH----HHhhhhHHHHHHhhCC-Chhhccchhhhhhhhhhhhhhh
Confidence 11111111122 234444444333333222 23334455554 5677 8889999999999999999999
Q ss_pred HHHHHhhhcCchHHHhhhHHHHHHH-HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHH
Q 011657 330 AVLVVERLGRRPLLLGGVSGIVISL-FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLS 408 (480)
Q Consensus 330 ~g~l~d~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 408 (480)
.|.++||+|++-..+.+..+..+.. ..+.+. ..+++.....+.+...... ...|..++.+.|+++.|++.|
T Consensus 320 fg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft----~lsPy~~m~~lGLsysllA----cslWP~va~~vpE~qLGTayg 391 (459)
T KOG4686|consen 320 FGAISDKYGFNLWWVASACILTLLGHSGLFFT----FLSPYTSMTFLGLSYSLLA----CSLWPCVASLVPEEQLGTAYG 391 (459)
T ss_pred HHHhHhhhcceehhHHHHHHHHHHHhhhHHhh----hccHHHHHHHHhhhHHHHH----HHHhhhhhhhCCHHHhcchHH
Confidence 9999999999877666554443332 222211 1234433332222222222 223456677889999999999
Q ss_pred HHHHHHHHHHHhHhhcchhhHHhhC-ccH---HHHHHHHHHHHHHHhcCCC
Q 011657 409 VAVLVNFGANALVTFAFSPLKDLLG-AGI---LFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 409 ~~~~~~~~g~~i~~~~~~~~~~~~g-~~~---~~~~~~~~~~~~~~~~~~~ 455 (480)
.++.++++|-++.|.+.|.+.|..| +.+ .|.+.+.+++.+..+.+.+
T Consensus 392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 9999999999999999999999876 322 3445555566665555543
No 99
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.84 E-value=6e-19 Score=161.92 Aligned_cols=356 Identities=16% Similarity=0.141 Sum_probs=208.4
Q ss_pred ccccccccccccCCCCCCCccccCChhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCc
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVE-IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 146 (480)
+...+.+.|.+.+| +|+|..| .|.+.++++.+|++++++.|+++||+|.|+++.++.+.+++.+++.+++++
T Consensus 42 R~n~s~a~p~L~~e-------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 42 RPGESFITPYLLTV-------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hchHHHHHHHHHHH-------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788888887 9999999 999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhH-----------------------------hHHhhhhhhhh--hhhhhHHHHhchhH---HHHH
Q 011657 147 FIIMVVGRFVFGIGIGL-----------------------------GGYGIGSLLVD--LVAGWRYMYGASTP---LAVI 192 (480)
Q Consensus 147 ~~~l~~~r~l~G~g~g~-----------------------------~g~~~g~~l~~--~~~~wr~~f~~~~~---~~~~ 192 (480)
+..+.+.|++.|++.|. +|..+++.+.. ...|||+.+...-+ ...+
T Consensus 115 l~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 99999999999999998 33333333322 12388876554433 2333
Q ss_pred HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHh---hh
Q 011657 193 MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF---HG 269 (480)
Q Consensus 193 ~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 269 (480)
.++..+++|..++-+.-++.+.+ +.+.+ .+.....++. . . +..+..+.......+.++ +.
T Consensus 195 a~~~a~~LP~~~~sl~f~~~~~~-----~~~~~----~~~~~~~~~~----~--~--~~~~~~~~~~~~~~~~l~~~~~~ 257 (511)
T TIGR00806 195 SVFLALFLKRPKRSLFFNRLEDV-----RGALP----CELDQMVPGP----G--G--KLEDYLGTCRDSFLVRMLSELVT 257 (511)
T ss_pred HHHHHHhCCCCchhhhhcccccc-----ccccc----cccccCCCCC----c--c--ccchhhhhhhhHHHHHHHHHHHH
Confidence 55566778865543322220000 00000 0000000000 0 0 000000000001111111 11
Q ss_pred hhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHH
Q 011657 270 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSG 349 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 349 (480)
-...+.++-..+.+....+++.-+..|...+.++..-..+..-|..-.+..+.+.+..+..|++-.++.+-..+.++.+.
T Consensus 258 ~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s 337 (511)
T TIGR00806 258 IYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVS 337 (511)
T ss_pred HhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHH
Confidence 12223334444555555666667777877777766441222455666777777888888888885555332233333322
Q ss_pred HHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc----
Q 011657 350 IVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF---- 425 (480)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~---- 425 (480)
..-+.+++.. ...++.|...+..+++...+..... +...-++.....+.-|...|+++++..+-..+...++
T Consensus 338 ~~~~gll~~m---~~t~~Iw~~Y~~yvlf~~~y~flit-ia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~ 413 (511)
T TIGR00806 338 AIQAGLVFWM---SQSHDIWVLYVTYVLFRGIYQFLVP-IATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKR 413 (511)
T ss_pred HHHHHHhhhh---hcccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEccc
Confidence 2222222211 1245667777777777777766543 4335555555656668888888888766666555543
Q ss_pred hhhHH---hh-CccHHHHHHHHHHHHHHHh
Q 011657 426 SPLKD---LL-GAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 426 ~~~~~---~~-g~~~~~~~~~~~~~~~~~~ 451 (480)
|.-.+ .+ =|...|.+.+++.++..++
T Consensus 414 gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~~ 443 (511)
T TIGR00806 414 GLGLQVRKQFRIYSVYFLVLSIICFFGAGL 443 (511)
T ss_pred ccCCCceeEEEehhhHHHHHHHHHHHHHHH
Confidence 11111 11 1333556666655555443
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.83 E-value=4.6e-19 Score=171.93 Aligned_cols=351 Identities=15% Similarity=0.150 Sum_probs=188.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHhH---
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGL--- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~--- 163 (480)
+|.+..+.+++.+.+........+++|+++|| +|||+++.++.++++++.+++++++ +.+.++++|+++|+|.|.
T Consensus 52 lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~ 131 (500)
T PRK09584 52 LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKA 131 (500)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccC
Confidence 89999999999988887777777899999999 5999999999999999999999875 566777889999999885
Q ss_pred ---------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHh
Q 011657 164 ---------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 210 (480)
Q Consensus 164 ---------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 210 (480)
+|+.+++++.+.. |||+.|++.++..++..+.+++.+ +++.++
T Consensus 132 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~i~~~~~~---~~~~~~ 207 (500)
T PRK09584 132 NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSVAFALSVVGMLITVVNFAFCQ---RWVKQY 207 (500)
T ss_pred CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHhH---HHhccC
Confidence 5666777766655 999999998765554333222221 111111
Q ss_pred ccccc---CchhhhHHHHHHH--H----HHHhCCCCCCCChhhHHHHH--H-hhhcccccccccHHHHhhhhhhhHHHHH
Q 011657 211 AMKRK---GDMQDLRESAISC--L----CRLRGQSIGDSAPTEVDEIL--T-ELSYVGEDKEVSLREVFHGKCLKALIIG 278 (480)
Q Consensus 211 ~~~~~---~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (480)
+.+++ .|..+....+... + ....... + ......... . ......... ...+.-+++... .+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~ 280 (500)
T PRK09584 208 GSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQ-E--IARMALGVVALGIVVIFGKEAF--AMKGAARRKMIV--AFI 280 (500)
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcc-h--HHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHH--HHH
Confidence 10010 1111100000000 0 0000000 0 000000000 0 000000000 000111111111 111
Q ss_pred HHHHHHHHhhChhHHHHhHHHHHHh-----cC--C-CCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc----CchHHHhh
Q 011657 279 AGLVLFQQITGQPSVLYYAASILQS-----AG--F-SAASDATRVSILLGLFKLIMTGLAVLVVERLG----RRPLLLGG 346 (480)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~g--~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g----~~~~~~~~ 346 (480)
.++.....+ ......+..+.. .. . .-.....++.+...+..++..++..++-+|.+ ..+.+.++
T Consensus 281 ~~~~~i~f~----~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G 356 (500)
T PRK09584 281 LMLEAIIFF----VLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIG 356 (500)
T ss_pred HHHHHHHHH----HHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHH
Confidence 111111111 112222222211 10 0 01123556666777777777777655555554 44667778
Q ss_pred hHHHHHHHHHHHHHhhccC---CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 347 VSGIVISLFLLGSYYLFLD---DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
+++.+++++.+........ ..+.+..+...++.+.......|....++.+..|++.||.++|+......+|..++..
T Consensus 357 ~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~ 436 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGY 436 (500)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777654322111 1112234444444455555566788889999999999999999887776666666655
Q ss_pred cchhhH----------HhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 424 AFSPLK----------DLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 424 ~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
+.+... ...++...|...++++++..++.+.
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 437 VANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 553211 1123556777777666555444433
No 101
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.83 E-value=1.7e-19 Score=173.38 Aligned_cols=336 Identities=12% Similarity=-0.019 Sum_probs=206.4
Q ss_pred hhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHH
Q 011657 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELILAAL 132 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~ 132 (480)
...++..|..........+.+.++ +|++..+++...+...+...+-.+ +|+++||++ ||+.++++.+
T Consensus 32 ~~~y~~qGl~~l~~~~~~~~l~~~-------lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 32 LQVLFVKGIAGLMRLPLSPMLTDD-------LGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHhhHHHHhhhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 334466666633444555555555 899999999999999999999666 999999998 7888888877
Q ss_pred HHH-HHHHHHHhcCchHHHH-HHHHHHHHHHhH------------------------------------hHHhhhhhhhh
Q 011657 133 LYL-VGALVTALAPDFIIMV-VGRFVFGIGIGL------------------------------------GGYGIGSLLVD 174 (480)
Q Consensus 133 ~~~-~~~~~~~~~~~~~~l~-~~r~l~G~g~g~------------------------------------~g~~~g~~l~~ 174 (480)
+.+ +.....+..++...+. +..++.+++.+. +|+.+++.+.+
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 763 4433344445544444 478888888777 33333444444
Q ss_pred hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhc
Q 011657 175 LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 254 (480)
Q Consensus 175 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (480)
.. +||..|++.+++.++..+..++++|++.....+. .++... ..........+
T Consensus 184 ~~-~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~----------~~~~~~------------~~~~~~~~~~~---- 236 (468)
T TIGR00788 184 KT-LTRILFLITAALLLLQLFVSNLSKERRAFVRPRI----------GTYLEM------------NMALLTLGVLA---- 236 (468)
T ss_pred hc-CcchHHHHHHHHHHHHHHHHHhcccccccccccc----------cccchh------------hhhhhhhhHHH----
Confidence 44 8999999998888776666677787631000000 000000 00000000000
Q ss_pred ccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 011657 255 VGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVV 334 (480)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 334 (480)
..++.....+..++++..+..++..++.+. ..... ....+. ...+..|+ ++.+.|......+++.+++..+.+++.
T Consensus 237 ~~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~~~~-~~~~f~-~~~~~lG~-s~~~~G~~~~~~~v~~i~g~~~~~~~~ 312 (468)
T TIGR00788 237 NVKVQILGLRGAIQLLEIAKPLIFIFLSYA-NLPGA-SGSVFC-ATTQCLPG-GPSFSGMSKVVGNLGSLCGVGGYDRFL 312 (468)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hcCCC-CceeEE-EEcccCCC-CcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 000001123334454544443332222111 11111 111111 11235677 899999999999999999999999999
Q ss_pred hhhcCchHHHhhhHHHHHHHHHHHHHhhccC-----CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHH
Q 011657 335 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-----DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSV 409 (480)
Q Consensus 335 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 409 (480)
+|++.|+++.++.++.+++...........+ ...+.......+.....+..+.+. ..++.+..|++.+|+..++
T Consensus 313 ~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al 391 (468)
T TIGR00788 313 KTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFAL 391 (468)
T ss_pred hhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHH
Confidence 9999999998888877776644321100000 112222333333444445555555 4899999999999999999
Q ss_pred HHHHHHHHHHhHhhcchhhHHhhC
Q 011657 410 AVLVNFGANALVTFAFSPLKDLLG 433 (480)
Q Consensus 410 ~~~~~~~g~~i~~~~~~~~~~~~g 433 (480)
.+++.++|..+++.+.+.+.+..|
T Consensus 392 ~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 392 LASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999888
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.80 E-value=2.9e-18 Score=166.13 Aligned_cols=300 Identities=15% Similarity=0.046 Sum_probs=172.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhh-hHHHHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGR-RRELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (480)
+|++..++|.+..+..+.-++..|+.|.++| |+|| |+.++++.+..+++.++....++ +..+++..++.
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~ 116 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILW 116 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999 6698 55666788888887666644332 23444555555
Q ss_pred HHHHhH-------------------------------hHHhhhhhhh----------hhhhhhHHHHhchhHHHHHH-HH
Q 011657 158 GIGIGL-------------------------------GGYGIGSLLV----------DLVAGWRYMYGASTPLAVIM-GM 195 (480)
Q Consensus 158 G~g~g~-------------------------------~g~~~g~~l~----------~~~~~wr~~f~~~~~~~~~~-~~ 195 (480)
+++... +|..+.+.+. +...+|+....+.+++.++. .+
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 555444 1111111110 00114555555554444442 22
Q ss_pred HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 196 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 196 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
..+..+|.+.. .+. +..++++.+.+..++.+++++.++..
T Consensus 197 ~~~~~~e~~~~------------------------------------~~~----~~~~~~~~~~~~~~~~~~~n~~~~~l 236 (473)
T PRK10429 197 TLRNVHEVYSS------------------------------------DNQ----VSAEGSHLTLKDIVALIYKNDQLSCL 236 (473)
T ss_pred HHcCceecCCc------------------------------------ccc----ccccccCCCHHHHHHHHhcCHHHHHH
Confidence 22234443210 000 00000011112223344455444433
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
+....+... .......+.+++.+.... +....+.......++.+++.++.+++.||+|+|+.+..+..+..++.+
T Consensus 237 l~~~~~~~~----~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~ 311 (473)
T PRK10429 237 LGMALAYNI----ASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCG 311 (473)
T ss_pred HHHHHHHHH----HHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 333222222 222333344445544433 445556666677788899999999999999999998877776665554
Q ss_pred HHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCC-------hhhhhhHHHHHHHHHHHHHHhHhhcchhh
Q 011657 356 LLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFP-------LRLRGRGLSVAVLVNFGANALVTFAFSPL 428 (480)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 428 (480)
.+.........+.+..++...+...+.+ ...+..+++.+|..+ .+..|...|...++..++..+++.+.|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~i~~~l~g~~~~-~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 312 VLLLMGLAAPHNALLIVIAGILLNIGTA-LFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4432211122223333333333333333 233455577888854 34456688999999999999999999999
Q ss_pred HHhhCc
Q 011657 429 KDLLGA 434 (480)
Q Consensus 429 ~~~~g~ 434 (480)
.+..|+
T Consensus 391 l~~~Gy 396 (473)
T PRK10429 391 LGLIGY 396 (473)
T ss_pred HHHcCC
Confidence 987776
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.80 E-value=8.9e-19 Score=160.08 Aligned_cols=321 Identities=19% Similarity=0.183 Sum_probs=191.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH--HHHHHHHHHH-Hh----cCchH-HHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA--LLYLVGALVT-AL----APDFI-IMVVGRFVFGIG 160 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~--~~~~~~~~~~-~~----~~~~~-~l~~~r~l~G~g 160 (480)
.|++..++|.+.++..+...+.+|+.|.++||+|.||-++..+ ++...+.... .+ ..|.+ ..+++-+..|+.
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999666544332 2222222222 22 22322 223322222221
Q ss_pred H----hH------------------------hHHhhhhhhhhhhh--hhHHHHhchhHHHHHHHHHHhcc-cCchHHHHH
Q 011657 161 I----GL------------------------GGYGIGSLLVDLVA--GWRYMYGASTPLAVIMGMGMWWL-PASPRWLLL 209 (480)
Q Consensus 161 ~----g~------------------------~g~~~g~~l~~~~~--~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~~~~ 209 (480)
. +. +|..++..+..... +-+..|++....+++..++.++. |+.++....
T Consensus 118 f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~ 197 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEV 197 (412)
T ss_dssp TTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-S
T ss_pred HcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhh
Confidence 1 11 44444444443211 34567777766666544443333 333210000
Q ss_pred hcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccc---cHHHHhhhhhhhHHHHHHHHHHHHH
Q 011657 210 CAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV---SLREVFHGKCLKALIIGAGLVLFQQ 286 (480)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (480)
. + ....++++. ...+++|++++|...+........
T Consensus 198 ~----------------------------------------~-~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~- 235 (412)
T PF01306_consen 198 A----------------------------------------D-ALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAI- 235 (412)
T ss_dssp S----------------------------------------T-TSSS------HHHHHHHTTSHHHHHHHHHHHHHHHH-
T ss_pred h----------------------------------------c-ccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHH-
Confidence 0 0 000111122 245667777766654433322221
Q ss_pred hhChhHHHHhHHHHHHhc----CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhh
Q 011657 287 ITGQPSVLYYAASILQSA----GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYL 362 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (480)
+..+....+.|.... +. +....|...+...+.+++.-.+..++.+|+|.|+.++++..++.+=..+.++
T Consensus 236 ---Y~vfdqqf~~y~~~~f~~~~~-g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~--- 308 (412)
T PF01306_consen 236 ---YDVFDQQFPIYFASFFQSAGQ-GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF--- 308 (412)
T ss_dssp ---HHHHHHHHHHHHHHTSSSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---
T ss_pred ---HHHHHHHHHHHHHHHhccccc-ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh---
Confidence 223333334444332 23 3356788899999999999999999999999999999999888888887765
Q ss_pred ccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHH-HHHHHHHHHhHhhcchhhHHhhCccHHHHHH
Q 011657 363 FLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVA-VLVNFGANALVTFAFSPLKDLLGAGILFYAF 441 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~ 441 (480)
..+++.....-.+-..-...... ...-|+.+.+|++..++...+. +...+++.++.+.+.|.+.|+.|++..++++
T Consensus 309 --~~~~~~i~~~klLH~~e~~l~lv-a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylim 385 (412)
T PF01306_consen 309 --ATNPWVISLIKLLHALEFPLLLV-AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIM 385 (412)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --hcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHH
Confidence 34555544444444444444333 3347999999999999999886 5668999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCC
Q 011657 442 GVIAVLSLAFIFXXXXXXXX 461 (480)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~ 461 (480)
+.+.++..++..+.+++.++
T Consensus 386 g~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 386 GLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHheeeecCCCc
Confidence 98887777766665554443
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.79 E-value=1.7e-17 Score=159.90 Aligned_cols=293 Identities=16% Similarity=0.048 Sum_probs=175.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhh-HHHHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRR-RELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (480)
+|++..++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....++ +..+++..++.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 7874 5566777888777766655553 34455555555
Q ss_pred HHHHhH-------------------------------hHHhhhhhh----hh------hhhhhHHHHhchhHHHHHHHHH
Q 011657 158 GIGIGL-------------------------------GGYGIGSLL----VD------LVAGWRYMYGASTPLAVIMGMG 196 (480)
Q Consensus 158 G~g~g~-------------------------------~g~~~g~~l----~~------~~~~wr~~f~~~~~~~~~~~~~ 196 (480)
+.+... +|..+++.+ .. ...+|+..+.+.++++++..+.
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 554443 222222221 11 1236777777766666553333
Q ss_pred -HhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 197 -MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 197 -~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
.+..+|.++. . +.++.+.....+++++++.++..
T Consensus 200 ~~~~~~e~~~~-------------------------------~--------------~~~~~~~~~~~~~~~~n~~~~~l 234 (444)
T PRK09669 200 CFFMTKERYTP-------------------------------E--------------VDNSSSVWKDLKLLLGNSQWRIM 234 (444)
T ss_pred HhCCeEEecCC-------------------------------C--------------CcCCCCHHHHHHHHhCCchHHHH
Confidence 3333432100 0 00011122346667777776665
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
.....+...... ......+++.+.... +............+..+++.++.+++.||+|+|+.+..+..+..+...
T Consensus 235 ~~~~~~~~~~~~----~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 309 (444)
T PRK09669 235 FIFNVVLLTAVV----TRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSA 309 (444)
T ss_pred HHHHHHHHHHHH----HHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 444333322221 112222333332222 333444555566677888889999999999999998877665544333
Q ss_pred HHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCC-------hhhhhhHHHHHHHHHHHHHHhHhhcchhh
Q 011657 356 LLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFP-------LRLRGRGLSVAVLVNFGANALVTFAFSPL 428 (480)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 428 (480)
.+.. ...++.+..++..++.+.+ .....+..+++++|..+ .+..|...|..+++..+|.++++.+.|.+
T Consensus 310 ~~~~---~~~~~~~~~~~~~~i~g~~-~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 310 LIFF---IPPSNVWLIFALNILFNFI-QNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHHH---hCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 1122333333333333333 33444667788888774 33456778899999999999999999999
Q ss_pred HHhhCcc
Q 011657 429 KDLLGAG 435 (480)
Q Consensus 429 ~~~~g~~ 435 (480)
.+..|+.
T Consensus 386 l~~~Gy~ 392 (444)
T PRK09669 386 LAWVDYV 392 (444)
T ss_pred HHHcCCC
Confidence 9987763
No 105
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.78 E-value=8.9e-17 Score=151.88 Aligned_cols=337 Identities=17% Similarity=0.084 Sum_probs=198.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhHHHHHH-HHHHHHHHHHHHhcCchHHHHH-----------
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRELILA-ALLYLVGALVTALAPDFIIMVV----------- 152 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~~~~~~~~~~~~~~~~~~l~~----------- 152 (480)
+|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .+...++.++.++++++..++.
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~ 113 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRA 113 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHH
Confidence 8999999999999999999999999999999 59999998874 6666677777777766432211
Q ss_pred -HHHHHHH-----HHhH------------------------------------hHHhhhhhhh--hhh------------
Q 011657 153 -GRFVFGI-----GIGL------------------------------------GGYGIGSLLV--DLV------------ 176 (480)
Q Consensus 153 -~r~l~G~-----g~g~------------------------------------~g~~~g~~l~--~~~------------ 176 (480)
.+++.|+ +... +|+.+|++.. ...
T Consensus 114 i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (477)
T TIGR01301 114 IIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSC 193 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccccc
Confidence 2222222 2221 4444444431 100
Q ss_pred hhhHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcc
Q 011657 177 AGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 255 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (480)
.+.|+.|++.++..++ ..+..+..+|.|.... + + ..++ ..+ +.+
T Consensus 194 ~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~--~-----~---~~~~------~~~-------------------~~~ 238 (477)
T TIGR01301 194 ANLKSCFLIDIILLAILTYIALSAVKENPLIGS--D-----D---FINS------EAA-------------------PPS 238 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc--c-----c---chhh------hcc-------------------ccc
Confidence 1568888888887776 5556667888652100 0 0 0000 000 000
Q ss_pred cccccccHHHHhhhh-hhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-c-CCCCCc-----c----hHHHHHHHHHHH
Q 011657 256 GEDKEVSLREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQS-A-GFSAAS-----D----ATRVSILLGLFK 323 (480)
Q Consensus 256 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~-----~----~~~~~~~~~~~~ 323 (480)
+......++++++.- ...+.+...++..++.+.++..+.+|.+.+..+ . +..++. + ..+......+..
T Consensus 239 ~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~ 318 (477)
T TIGR01301 239 KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVL 318 (477)
T ss_pred ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 001112234444331 112222222222333333334445555555432 2 221111 1 223445555666
Q ss_pred HHHHHHHHHHHhhhcC-chHHHhhhHHHHHHHHHHHHHhhccCC--c--------------hhHHHHHHHHHHHHHhccc
Q 011657 324 LIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDD--V--------------PAVAVVALLLYVGCYQLSF 386 (480)
Q Consensus 324 ~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~ 386 (480)
.+.+++..++.+|+|+ |+....+.++.++++....+.....++ . .+..+..+...+.... ..
T Consensus 319 ~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A-~~ 397 (477)
T TIGR01301 319 GITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLA-IT 397 (477)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHH-HH
Confidence 6777778889999985 677678877777777766543211000 0 1333333333443333 34
Q ss_pred ccccceeecccCCh--hhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC--ccHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 011657 387 GPIGWLMISEVFPL--RLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG--AGILFYAFGVIAVLSLAFIFXXXXXXXX 461 (480)
Q Consensus 387 ~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (480)
..++++++++..|+ +..|..+|+.|.+..+...+.....|.+.+..| ....+.+.++..+++++..++.+|+.+.
T Consensus 398 ~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 398 YSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 46778899998884 456999999999999999999988888776666 3446777777788888888887877653
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=3.1e-17 Score=158.34 Aligned_cols=165 Identities=18% Similarity=0.032 Sum_probs=103.7
Q ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCch
Q 011657 262 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 341 (480)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 341 (480)
.++.+++++.+....+..++..... .......+++.++....+....++......++.+++.++.+++.||+|+|+
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~ 295 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLIST----FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN 295 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHH----HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 3566777776655544433333322 233344555555432214444444444446677889999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChh-------hhhhHHHHHHHHH
Q 011657 342 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLR-------LRGRGLSVAVLVN 414 (480)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~~~~ 414 (480)
.+..+..+..++.+.+.+. ...+.+.......+...+.+ ...+..+++..|..|.+ .+|...|+.++..
T Consensus 296 ~~~~g~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~g~G~~-~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~ 371 (448)
T PRK09848 296 TFLIGALLGTCGYLLFFWV---SVWSLPVALVALAIASIGQG-VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTR 371 (448)
T ss_pred HHHHHHHHHHHHHHHHHHc---CchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHH
Confidence 9998888777776655421 11222322222333333333 23345557777777643 4699999999999
Q ss_pred HHHHHhHhhcchhhHHhhCc
Q 011657 415 FGANALVTFAFSPLKDLLGA 434 (480)
Q Consensus 415 ~~g~~i~~~~~~~~~~~~g~ 434 (480)
.+|..+++.+.+.+.+..|+
T Consensus 372 klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 372 KCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999998887665
No 107
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=2.5e-16 Score=141.49 Aligned_cols=363 Identities=15% Similarity=0.124 Sum_probs=223.7
Q ss_pred hhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Q 011657 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (480)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (480)
+.|+++++.++-.+..++.-..+++.......- ++ +....-|+.-+|++.+....+++-|+.||+|-|..+.
T Consensus 42 rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~-------Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 42 RRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSF-------YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred hHhHHHHHHHHHHhcCcchheeehhHHHHHHHH-------hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 344444555555566666544445544444332 67 7778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC------chH--HHHHHHHHHHHHHhH------------------------------hHHhhh-
Q 011657 129 LAALLYLVGALVTALAP------DFI--IMVVGRFVFGIGIGL------------------------------GGYGIG- 169 (480)
Q Consensus 129 ~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~g~g~------------------------------~g~~~g- 169 (480)
++..+.++|+.+-..+. .++ ....+..+.+.+.-. +|..+|
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 99999999999877753 234 555666666665544 333333
Q ss_pred ---hhhhhh-----hhhhHH--HHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCC
Q 011657 170 ---SLLVDL-----VAGWRY--MYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIG 238 (480)
Q Consensus 170 ---~~l~~~-----~~~wr~--~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (480)
.++... ...|.. .|+...+++.+ +.+..+..+|.|+.-.. ..+.
T Consensus 194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps-----------~s~~-------------- 248 (480)
T KOG2563|consen 194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPS-----------ASQA-------------- 248 (480)
T ss_pred hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc-----------hhHh--------------
Confidence 333322 125544 35544444444 33333333443321000 0000
Q ss_pred CCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHH
Q 011657 239 DSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSIL 318 (480)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (480)
. ..+.+-..+.++.++++.+....+...+... .++.....+...+...|+ +...+|.....
T Consensus 249 ----------~----~~~~~f~~si~~~~~n~~F~il~~~ygi~~g----~F~~l~~~l~~~l~~sgY-~~~~aG~ig~l 309 (480)
T KOG2563|consen 249 ----------A----LQDASFPKSIKSCFKNRQFIILAICYGIGLG----LFNSLSTLLNLALCPSGY-EGVFAGYIGAL 309 (480)
T ss_pred ----------h----hhcCcHHHHHHHHHcCccHHHHHHHHhhhHH----HHHHHHHHhhhccccccC-CccccchhHHH
Confidence 0 0011234456677777665544444333333 233444444434455566 56789999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcC-chHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeeccc
Q 011657 319 LGLFKLIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEV 397 (480)
Q Consensus 319 ~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
..++++++..+.|.+.||.+. |.+.+.......++...+.. ... .....+.+...+...+.++.+..|+..-+..|.
T Consensus 310 ~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~-~t~-~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~ 387 (480)
T KOG2563|consen 310 MIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLT-CTL-FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVET 387 (480)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-hhc-cCCceEehhhhHHHHHHhhcCCCCcceeeeeee
Confidence 999999999999999999875 33344333333333221111 111 122223333444455566667778888899998
Q ss_pred CChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC----ccHHHHHHHHHHHHHHHhcCCCCCCCCCChhh
Q 011657 398 FPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG----AGILFYAFGVIAVLSLAFIFXXXXXXXXSFQR 465 (480)
Q Consensus 398 ~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (480)
.-|..-++..|+.+..+++.+.+-..+.+...+..+ +...-+.....++++.++..+++++.++++.+
T Consensus 388 TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 388 TYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred ccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 766778899999999999999999999998888776 44445555666666666666656555544433
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=2.1e-16 Score=151.49 Aligned_cols=295 Identities=18% Similarity=0.192 Sum_probs=200.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhHH-HHHHHHHHHHHHHHHHhc-C-c------hHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRE-LILAALLYLVGALVTALA-P-D------FIIMVVGRF 155 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~-~~~~~~~~~~~~~~~~~~-~-~------~~~l~~~r~ 155 (480)
+++++...|.+..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... + + ...+.+..+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 7999999999999999999999999999999 8997765 456888888888887766 4 1 233455666
Q ss_pred HHHHHHhH-------------------------------hHHhhhhhh----hhh-----h-hhhHHHHhchhHHHHHH-
Q 011657 156 VFGIGIGL-------------------------------GGYGIGSLL----VDL-----V-AGWRYMYGASTPLAVIM- 193 (480)
Q Consensus 156 l~G~g~g~-------------------------------~g~~~g~~l----~~~-----~-~~wr~~f~~~~~~~~~~- 193 (480)
+..++... +|..+.+.+ ... . .+|++..++.+++.++.
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 66666665 222221111 111 1 17999999888888874
Q ss_pred HHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhh
Q 011657 194 GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 273 (480)
Q Consensus 194 ~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (480)
.+..+..+|.++. .+.+.++.+-+..++++++++.++
T Consensus 192 ~i~~~~~ke~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 192 LITFFFVKERSVE-------------------------------------------VTEQEKKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred hhhhheeeecccc-------------------------------------------ccccccccccccchhhhcccchHH
Confidence 4455556762110 000001223345577788887766
Q ss_pred HHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHH
Q 011657 274 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 353 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 353 (480)
..+....+..+... ......+++.+..-. ++...+.......+..+++.++.++++||+|+|+.+..+..+.+++
T Consensus 229 ~l~~~~~~~~~~~~----~~~~~~~y~~~~vl~-~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 229 ILLLAFFLQWLAFA----LMNTFLPYYFTYVLG-NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred HHHHHHHHHHhhhh----hhhhHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 65555544444332 333344444444333 3456777788889999999999999999999999999999988888
Q ss_pred HHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCCh-------hhhhhHHHHHHHHHHHHHHhHhhcch
Q 011657 354 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPL-------RLRGRGLSVAVLVNFGANALVTFAFS 426 (480)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~~~~~~~~~~g~~i~~~~~~ 426 (480)
.+++.+.. ..+.+..++...+.+.+. .......+++.+|..+. +..|...|+.++...++..+++.+.+
T Consensus 304 ~~~~~~~~---~~~~~~~~i~~~l~gi~~-~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 304 FLLLFFLG---PGSPWLVLILFILAGIGY-GAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHHHHHHH---hhhHHHHHHHHHHhHhhh-cccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 77765531 133444444444444443 44446777899988763 44688899999999999999999999
Q ss_pred hhHHhhCcc
Q 011657 427 PLKDLLGAG 435 (480)
Q Consensus 427 ~~~~~~g~~ 435 (480)
.+.+..|+.
T Consensus 380 ~~l~~~Gy~ 388 (428)
T PF13347_consen 380 LLLALVGYD 388 (428)
T ss_pred HHHHHhCcC
Confidence 998876654
No 109
>PRK11462 putative transporter; Provisional
Probab=99.73 E-value=1.5e-15 Score=146.23 Aligned_cols=291 Identities=12% Similarity=0.050 Sum_probs=164.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhHH-HHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRE-LILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (480)
+|+++..+|.+..+.-+--++.-|+.|.++|| +||||. ++++.+..+++.+++-..++ ...+.+.-++.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999995 798655 55677888888777655553 23444555555
Q ss_pred HHHHhH-------------------------------hHHhhhhhhh----hh------hhhhHHHHhchhHHHHHHHHH
Q 011657 158 GIGIGL-------------------------------GGYGIGSLLV----DL------VAGWRYMYGASTPLAVIMGMG 196 (480)
Q Consensus 158 G~g~g~-------------------------------~g~~~g~~l~----~~------~~~wr~~f~~~~~~~~~~~~~ 196 (480)
.++... +|..+++.+. .. ..+|+....+.+++.++..+.
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 655554 2222222221 11 125666666666555543332
Q ss_pred -HhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 197 -MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 197 -~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
....+|.++. +.++.+.+..++..++++.++..
T Consensus 200 ~~~~~kE~~~~----------------------------------------------~~~~~~~~~~l~~~~~Nk~~~~l 233 (460)
T PRK11462 200 CFFTTKERVEA----------------------------------------------PPTTTSMREDLRDIWQNDQWRIV 233 (460)
T ss_pred HHhcceeccCC----------------------------------------------CccCCCHHHHHHHHhCChHHHHH
Confidence 2233433110 00000112234556666655544
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
.....+....... ......++.+.... +....+.......++.+++.+++++++||+++|+.+..+..+..+...
T Consensus 234 ~~~~~~~~~~~~~----~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~ 308 (460)
T PRK11462 234 GLLTIFNILAVCV----RGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISL 308 (460)
T ss_pred HHHHHHHHHHHHH----HHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 3333333222221 11222222222222 333445566777888899999999999999999887654443333222
Q ss_pred HHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCC-------hhhhhhHHHHHHHHHHHHHHhHhhcchhh
Q 011657 356 LLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFP-------LRLRGRGLSVAVLVNFGANALVTFAFSPL 428 (480)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 428 (480)
++.+ .+..+.....+..++.+ .......++.+++..|..+ .+..|...+.......+|.++++.+.|.+
T Consensus 309 ~~~~---~~~~~~~~~~~~~~l~g-~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 309 AMFF---VPMQASITMFVFIFVIG-VLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHH---hchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 11222222222222222 2223334454566666655 33345556777788999999999999998
Q ss_pred HHhhCc
Q 011657 429 KDLLGA 434 (480)
Q Consensus 429 ~~~~g~ 434 (480)
.+..|+
T Consensus 385 L~~~Gy 390 (460)
T PRK11462 385 LAYGGY 390 (460)
T ss_pred HHHcCC
Confidence 887665
No 110
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.72 E-value=7.2e-15 Score=140.00 Aligned_cols=177 Identities=15% Similarity=0.197 Sum_probs=125.3
Q ss_pred HHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc--hHHHhhhHHHHH-HHHHH
Q 011657 282 VLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR--PLLLGGVSGIVI-SLFLL 357 (480)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~-~~~~~ 357 (480)
.++...-+.+.+......+.. ..|+ +..+.........+.+++|.++.+++.||+|.| +++..+.+...+ +...+
T Consensus 289 a~~l~~dg~~ti~~~~~i~a~~~lg~-s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~ 367 (477)
T PF11700_consen 289 AYFLYSDGVNTIISFAGIYATEVLGM-STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGL 367 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 333333444555555555555 6788 888999999999999999999999999999998 676665555422 22221
Q ss_pred H-HHhhc-cCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-c
Q 011657 358 G-SYYLF-LDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-A 434 (480)
Q Consensus 358 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-~ 434 (480)
. +.... ...+.+. +..+.++.+.+.++..+..-++.+|+.|+++.+...|++...+...+.+||.++|.+.+..| .
T Consensus 368 ~G~~~~~~g~~~~~~-f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~ 446 (477)
T PF11700_consen 368 FGFWPSFFGLKSPWE-FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQ 446 (477)
T ss_pred HHhhhcccCcccHHH-HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 00000 1223333 33334444555555566777899999999999999999999999999999999999999987 6
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 011657 435 GILFYAFGVIAVLSLAFIFXXXXXXXX 461 (480)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (480)
+..+....++.+++.++.++ .+..|+
T Consensus 447 r~g~~~l~~lf~~gl~ll~~-v~~~~g 472 (477)
T PF11700_consen 447 RYGFLFLLVLFLIGLILLFF-VDVEKG 472 (477)
T ss_pred hhHHHHHHHHHHHHHHHHhh-ccchhh
Confidence 77888888888888877654 443333
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.2e-14 Score=134.54 Aligned_cols=297 Identities=20% Similarity=0.152 Sum_probs=189.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhH-HHHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRR-ELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (480)
+|+++..+|.+..+.-+--++.-|+.|.+.|| +||+| .++.+.+..++.+.++-.+++ ....++..++.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 89999999999999999999999999999994 78755 566788999999998888874 34556667777
Q ss_pred HHHHhH---------------------------hHHhhhhhhh-------------h-hhhhhHHHHhchhHHHHHHHH-
Q 011657 158 GIGIGL---------------------------GGYGIGSLLV-------------D-LVAGWRYMYGASTPLAVIMGM- 195 (480)
Q Consensus 158 G~g~g~---------------------------~g~~~g~~l~-------------~-~~~~wr~~f~~~~~~~~~~~~- 195 (480)
+++... .+..+|.++. + ...||+..-.+.++++.+..+
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~ 202 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF 202 (467)
T ss_pred HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 777776 1112221111 1 123677666666666665333
Q ss_pred HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 196 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 196 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
+++-.+|.+.. .+ . ..+..+.+.+..+..+++++.++..
T Consensus 203 ~~~~v~ER~~~---~~-------------------------~-------------~~~~~~~~~~~~~~~~~~Nrp~~~~ 241 (467)
T COG2211 203 CFFNVKERVVE---TQ-------------------------P-------------TKTGVKLKLKDSFLLIFKNRPLLLL 241 (467)
T ss_pred HHHHhhcccCc---cc-------------------------c-------------CcccccccHHHHHHHHHccchHHHH
Confidence 33334554310 00 0 0000011112223345666655544
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISL 354 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 354 (480)
.+...+.+ ...+.......+|.+. .|. +.............+.+++.++..++.+|+|+|+++..+.++.+++.
T Consensus 242 l~~~l~~~----~~~~i~~s~~~yy~~y~lg~-~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 242 LLMNLLLF----IAFNIRGSIMVYYVTYVLGD-PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHH----HHHHHHhhhhheeEEEEcCC-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 44222222 2223333333444433 233 45556667777777777779999999999999999999988888888
Q ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccC-------ChhhhhhHHHHHHHHHHHHHHhHhhcchh
Q 011657 355 FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVF-------PLRLRGRGLSVAVLVNFGANALVTFAFSP 427 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~~~~~~~~~~g~~i~~~~~~~ 427 (480)
+++.+. ..++....++..+..+.......++.|++++|.. ..+..|...|...++..+|.+++..+.|+
T Consensus 317 ~~~~f~----~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 317 LLLYFT----PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred HHHHhh----cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 776542 2233333333333333344445678888988875 33566788899999999999999999999
Q ss_pred hHHhhCcc
Q 011657 428 LKDLLGAG 435 (480)
Q Consensus 428 ~~~~~g~~ 435 (480)
+.+..|+.
T Consensus 393 ~L~~~Gyv 400 (467)
T COG2211 393 ILGAIGYV 400 (467)
T ss_pred HHHHcCCC
Confidence 99877643
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.69 E-value=1.3e-14 Score=137.83 Aligned_cols=323 Identities=14% Similarity=0.074 Sum_probs=168.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHhH---
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGL--- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~--- 163 (480)
+|.+..+.+.+.+.+.....++.+++|+++||+ ||||++.++.++.+++.++.+... +...+.++..+.++|.|.
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 799999999999999999999999999999999 999999999999999988777643 223333333333333333
Q ss_pred ---------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHh
Q 011657 164 ---------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 210 (480)
Q Consensus 164 ---------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 210 (480)
++|.+.+.+.+.. |||+.|.+.++..++.++.+++..+. +...
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaaigm~l~li~~~~~~~~---l~~~ 195 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAVGMIAGLVIFLCGNRH---FTHT 195 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHHHHHHHHHHHHHhhhh---hccC
Confidence 4455555554444 99999998766444433333222111 1010
Q ss_pred -cccccCchhhhHHHHHH------H-------HHHHhCCCCCCCChhhHH--HHH--HhhhcccccccccHHHHhhhhhh
Q 011657 211 -AMKRKGDMQDLRESAIS------C-------LCRLRGQSIGDSAPTEVD--EIL--TELSYVGEDKEVSLREVFHGKCL 272 (480)
Q Consensus 211 -~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~ 272 (480)
+.++++.. ++ +.... . +....-.+ .. ...... ... .-.-..... + .+...+
T Consensus 196 ~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~------~-~~~~er 264 (493)
T PRK15462 196 RGVNKKVLR-AT-NFLLPNWGWLLVLLVATPALITVLFWK-EW-SVYALIVATIIGLGVLAKIYRK------A-ENQKQR 264 (493)
T ss_pred CCCCCCCch-hh-hHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHh------c-CCHHHH
Confidence 00011110 00 00000 0 00000000 00 000000 000 000000000 0 000011
Q ss_pred hHH--HHHHHH----HHHHHhhChhHHHHhHHHHHHh--cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcC--ch-
Q 011657 273 KAL--IIGAGL----VLFQQITGQPSVLYYAASILQS--AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR--RP- 341 (480)
Q Consensus 273 ~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~--~~- 341 (480)
+++ ++.+.+ ++.........++.|.....+. .|+ .-.+.+..++..+..++..++..++-.|..+ |.
T Consensus 265 ~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~--~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~ 342 (493)
T PRK15462 265 KELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGY--TVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTV 342 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcce--eeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 111 111111 1111111111222222221111 122 2346677788888888888887777666632 21
Q ss_pred ----HHHhhhHHHHHHHHHHHHHhhccC---CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHH
Q 011657 342 ----LLLGGVSGIVISLFLLGSYYLFLD---DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVN 414 (480)
Q Consensus 342 ----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 414 (480)
-..+++++++++++.+.+...... ..+.++++...++....-....|+..+.++++.|++.+|..+|+.....
T Consensus 343 s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~ 422 (493)
T PRK15462 343 RIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS 422 (493)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 145677777777766654222111 1233445555555566667778999999999999999999999986643
Q ss_pred -HHHHHhHhhcchhh
Q 011657 415 -FGANALVTFAFSPL 428 (480)
Q Consensus 415 -~~g~~i~~~~~~~~ 428 (480)
.++..++..+.+..
T Consensus 423 ~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 423 GAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHh
Confidence 56666555554433
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.67 E-value=1.5e-14 Score=131.47 Aligned_cols=145 Identities=13% Similarity=0.041 Sum_probs=103.4
Q ss_pred hhHHHHhHHHHHHh---cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCC
Q 011657 290 QPSVLYYAASILQS---AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDD 366 (480)
Q Consensus 290 ~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (480)
......|.+.|+.+ .|. ++.+.+...+....+.++|+++.+++.||+++|+.+..+..+..++.+++.. .+
T Consensus 156 e~~~~~w~~~yl~~~~~~g~-s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-----~~ 229 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGL-PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-----TH 229 (310)
T ss_pred HHHHHHHHHHHHHhcccCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----cC
Confidence 34566677888764 366 8889999999999999999999999999999998887777666665543322 11
Q ss_pred chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHH
Q 011657 367 VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVI 444 (480)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~ 444 (480)
. ........+.+ .+.....|...+...+..|+ +.+++.++. ....+|+++.|.+.|.+.|..|.+..+++...+
T Consensus 230 ~-~~~~~~~~l~g-~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 230 G-YVAMWFVLALG-LFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred C-HHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 2 22222333333 33334456666778887774 456677775 567899999999999999999988877754433
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.65 E-value=6.3e-14 Score=125.60 Aligned_cols=314 Identities=16% Similarity=0.154 Sum_probs=193.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHH-HHHHHHHHHHHHHHHHhcCc--hHHHH-HHHHHHHHHHhH----
Q 011657 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRE-LILAALLYLVGALVTALAPD--FIIMV-VGRFVFGIGIGL---- 163 (480)
Q Consensus 92 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~~~~~~~~~~~~--~~~l~-~~r~l~G~g~g~---- 163 (480)
+.+..+...++..+..++.+|+.|.++|+.|+||. +-+...+..++.++..++++ ++.+. +.-.+..++...
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 55678889999999999999999999999996655 44566666666666777665 44443 445566665554
Q ss_pred --------------------------hHHhhhhhh------hh---------------hhhhhHHHHhchhHHHHH-HHH
Q 011657 164 --------------------------GGYGIGSLL------VD---------------LVAGWRYMYGASTPLAVI-MGM 195 (480)
Q Consensus 164 --------------------------~g~~~g~~l------~~---------------~~~~wr~~f~~~~~~~~~-~~~ 195 (480)
+|..+.-++ .. ...+=|..+.+.++..++ .+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 111100000 00 011334455555554444 233
Q ss_pred HHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHH
Q 011657 196 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 275 (480)
Q Consensus 196 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (480)
.++..++.++-. +.......+. -++-..+++++.+++.....
T Consensus 216 m~~~v~~~~~~~-------------------------------~~~~~~l~~g-------~k~L~~t~k~i~~~~~i~~F 257 (438)
T COG2270 216 MILNVHDAEKIS-------------------------------SPPPTALRNG-------FKELKSTFKEIRGRKNLVLF 257 (438)
T ss_pred HHhccccccccc-------------------------------ccchHHHHHH-------HHHHHHHHHHHhcccchHHH
Confidence 333344332100 0000000000 01112234455444433333
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISL 354 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 354 (480)
++. .+...-+.+.+......+-. ..|. +..+..+......+..++|+++.|++.||+|.|+++..+.++..+.+
T Consensus 258 LiA----~~~~~DGv~til~~~~~fg~~~~gl-s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 258 LIA----RFFYIDGVNTILAMGGVFGAADLGL-SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred HHH----HHHHHhhHHHHHHHHHHHHHHHcCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 333 22333345566666666665 7788 88999999999999999999999999999999999888887776655
Q ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCc
Q 011657 355 FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGA 434 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~ 434 (480)
+.... ...... +..+.++.+.+.++.....=++..+.+|+++-+...|+++..+...+..+|.+.+.+.+..|-
T Consensus 333 ~~~~~-----~~~~~~-f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 333 LYLIF-----LEGELD-FWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHH-----ccccHH-HHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 54432 122222 222222333333334455568999999999999999999999999999999999999988774
Q ss_pred -cHHHHHHHHHHHHHHHhcCC
Q 011657 435 -GILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 435 -~~~~~~~~~~~~~~~~~~~~ 454 (480)
+..+....++.+++.++.+.
T Consensus 407 ~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 407 SRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred hhhHHHHHHHHHHhhHhhEEe
Confidence 44555556666666665544
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.65 E-value=1.6e-13 Score=125.95 Aligned_cols=360 Identities=16% Similarity=0.106 Sum_probs=216.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHhH--
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGL-- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~-- 163 (480)
+|+++++..-+.+.|..-.-+..+++|+++||+ |+|+.++.|.+++.+|.++.+.+. +...++++-.+.++|.|.
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 679999999999999988889999999999997 999999999999999999999984 789999999999999998
Q ss_pred ------------------------------hHHhh----hhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHH
Q 011657 164 ------------------------------GGYGI----GSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL 209 (480)
Q Consensus 164 ------------------------------~g~~~----g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~ 209 (480)
+|..+ -+.+.+.. +|...|...++-..+.++..+..+.. ...
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~r~---~~~ 211 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGRRH---VKG 211 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHccch---hcC
Confidence 44444 44444444 89999988887766655555444321 111
Q ss_pred hcccccCchhhhHHHHHHHHH----HHhCCC-CCCCChhhHHHHHH-----------hhhcccccccccHHHHhhhhhhh
Q 011657 210 CAMKRKGDMQDLRESAISCLC----RLRGQS-IGDSAPTEVDEILT-----------ELSYVGEDKEVSLREVFHGKCLK 273 (480)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 273 (480)
....++.... +..+...... ...... .............. ......++.....+++ ...-
T Consensus 212 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~---~~~~ 287 (498)
T COG3104 212 IGGVPDPNPL-SFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRL---LAAI 287 (498)
T ss_pred CCCCCCccch-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHH---HHHH
Confidence 1100000000 0011100000 000000 00000000000000 0000000000111111 1111
Q ss_pred HHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc-------hHHHhh
Q 011657 274 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR-------PLLLGG 346 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~ 346 (480)
++++...+++...-.....++.|.....+...+.-.-...+.-+...+.-++..++..++..|.+++ .-..++
T Consensus 288 ~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalG 367 (498)
T COG3104 288 PLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALG 367 (498)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHH
Confidence 2333333344444344445566655544332111234566777888888888888888888885443 123455
Q ss_pred hHHHHHHHHHHHHH--hhc--cCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 347 VSGIVISLFLLGSY--YLF--LDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 347 ~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
+.++..+++++... ... ....+.++++...++....-....|+..+++....|+...+..+++.......+..++.
T Consensus 368 l~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 368 LILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhc
Confidence 66666666665543 111 22345566666667777777778889999999999999999999999998888888888
Q ss_pred hcchh------hHHhhCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 423 FAFSP------LKDLLGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 423 ~~~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
.+.+. ..+.......|+..+...++..+..+...
T Consensus 448 ~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 448 QVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred eecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 87773 33444555678887777776666655433
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.61 E-value=2.6e-15 Score=139.12 Aligned_cols=361 Identities=15% Similarity=0.131 Sum_probs=198.3
Q ss_pred CCcccchhhhHHhHHHHhhhhhccccccccccccc-ccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011657 41 SPENYSVSAAILPFLFPALGGLLYGYDIGSTSCAT-ISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD 119 (480)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d 119 (480)
++.+.+|+..++..+..+ +.+.+.+++.+.. |.+++- +.+.+.+..|++.++..++.+++++++|+...
T Consensus 27 ~~~~t~wrsi~l~~~~sf----l~~v~~sI~~~s~wpYl~~l------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~ 96 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSF----LVAVQFSIYLTSMWPYLQKL------DPTATATFFGLVIAASSLGHAIFSLIFGIWSN 96 (488)
T ss_pred cccCCchHhHHHHHHHHH----HHhhhheEEEeecchhhhhc------CCCCCcchhhHHHHHHHHHHHhcchhhccccc
Confidence 445667888887755554 4444544443332 333321 05678889999999999999999999999999
Q ss_pred hhhh-hHHHHHHHHHHHHHHHHH-Hh---cC-chHHHHHHHHHHHHHHhH------------------------------
Q 011657 120 ILGR-RRELILAALLYLVGALVT-AL---AP-DFIIMVVGRFVFGIGIGL------------------------------ 163 (480)
Q Consensus 120 r~Gr-r~~~~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~g~g~------------------------------ 163 (480)
|.+. |+.++.|.++..+|+++. ++ .+ ..+.++++|++.|+|.|.
T Consensus 97 k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 97 KTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 9997 889999999999999988 43 23 578899999999999777
Q ss_pred ---hHHhhhhhhhhhh-hh-----------hHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHHHHH
Q 011657 164 ---GGYGIGSLLVDLV-AG-----------WRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAIS 227 (480)
Q Consensus 164 ---~g~~~g~~l~~~~-~~-----------wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~ 227 (480)
+||.++..+.... .| +..+-|+.+++.++ .+++..+++|.++-...++
T Consensus 177 g~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~---------------- 240 (488)
T KOG2325|consen 177 GIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKK---------------- 240 (488)
T ss_pred HHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccc----------------
Confidence 5555555554211 11 23455666666666 4455556777654111000
Q ss_pred HHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCC
Q 011657 228 CLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFS 307 (480)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 307 (480)
.+.+ ++ .+...++.+.. +..+...+.+....+...+.....-..+.+.....++..
T Consensus 241 -------------~~~~-~~-~~~~~~~~~~~---------~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~ 296 (488)
T KOG2325|consen 241 -------------KRSV-EE-EKSDIEKVKKP---------KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWT 296 (488)
T ss_pred -------------cccc-hh-hccchhhhccC---------ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccc
Confidence 0000 00 00000000000 111222222222333332222222333444444455553
Q ss_pred CCcchHHHHHHHHHHHHHHHHH---HHHHH-hhhcCchHHHhhhHHHHHHHHHHHHHhhccC------------------
Q 011657 308 AASDATRVSILLGLFKLIMTGL---AVLVV-ERLGRRPLLLGGVSGIVISLFLLGSYYLFLD------------------ 365 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~---~g~l~-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 365 (480)
+...+........+.+++...+ ..... -++.+|..+..+++....+..+....+....
T Consensus 297 ~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y 376 (488)
T KOG2325|consen 297 GSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEY 376 (488)
T ss_pred cchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccc
Confidence 3333333333344444433332 22222 2234455555554444443333221111100
Q ss_pred -------CchhHHHHHHHHHHHHHhcc-cccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHH
Q 011657 366 -------DVPAVAVVALLLYVGCYQLS-FGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGIL 437 (480)
Q Consensus 366 -------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~ 437 (480)
..+...+.....+..+.+.. ......++-+|...++.++++.+++......+..++|.+...+....|++++
T Consensus 377 ~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v 456 (488)
T KOG2325|consen 377 SWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPV 456 (488)
T ss_pred hhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHH
Confidence 00111111111111111111 1122336778888999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHh
Q 011657 438 FYAFGVIAVLSLAF 451 (480)
Q Consensus 438 ~~~~~~~~~~~~~~ 451 (480)
+.+.++..++....
T Consensus 457 ~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 457 WIILLCLLLVVAAL 470 (488)
T ss_pred HHHHHHHHHHHHHH
Confidence 77766555444433
No 117
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.57 E-value=6.1e-14 Score=134.76 Aligned_cols=172 Identities=15% Similarity=0.051 Sum_probs=128.6
Q ss_pred HHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHH
Q 011657 280 GLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGS 359 (480)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 359 (480)
.+.++..+.....+..+.|.+.++.|. +..+.++..+...++..++.++.|++.||+|||+.+.++.++..++.+++..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 107 (434)
T PRK11663 29 YLGYALFYFTRKSFNAAMPEMLADLGL-SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF 107 (434)
T ss_pred HHHHHHHHHhhhhHHHhhHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 333333333334556778899999999 8889999999999999999999999999999999999988888887776654
Q ss_pred HhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHH
Q 011657 360 YYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFY 439 (480)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~ 439 (480)
. .+.+.......+.+.+.+. ..+....++.|.+|+++|++++++.+....+|..+++.+.+.+.+..||++.|+
T Consensus 108 ~-----~~~~~l~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~ 181 (434)
T PRK11663 108 S-----SSLWAFALLWVLNAFFQGW-GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMM 181 (434)
T ss_pred H-----hHHHHHHHHHHHHHHHHHc-cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 2 2223222222222333333 335556888999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcCCCCCC
Q 011657 440 AFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~ 458 (480)
+.+++.++..+...+..+|
T Consensus 182 ~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 182 IAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 8877665544333333333
No 118
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.56 E-value=1e-13 Score=132.01 Aligned_cols=181 Identities=16% Similarity=0.089 Sum_probs=138.8
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHH
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 352 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 352 (480)
+...+...+.+...........+..|.+.++.|. +..+.++..+...++..++.++.|++.||+|||+++..+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL-SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC-CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 3444445555555555556677777887888888 899999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH--
Q 011657 353 SLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-- 430 (480)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-- 430 (480)
+.++..+. .+ ...+...-++.+.......|....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+
T Consensus 86 ~~~~~~~~-----~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 86 ASTATMFA-----TG-PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHh-----cC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77776542 23 33333333444444444456666788999999999999999999999999999999888764
Q ss_pred ----hhCccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 431 ----LLGAGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 431 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
..||++.|++.++..++..++.+++.+|++
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 368999999988877766666666666654
No 119
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=8.6e-14 Score=126.18 Aligned_cols=174 Identities=22% Similarity=0.199 Sum_probs=146.5
Q ss_pred HHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHH
Q 011657 277 IGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 356 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 356 (480)
+.+.+..+.....-....-.+|.+-++.+. +..++|...+.+..+..++.++...+.||+.||++++..+.++.++.++
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~v-s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l 94 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGV-SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL 94 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 333344444444445666788999999999 9999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccH
Q 011657 357 LGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGI 436 (480)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~ 436 (480)
..+ ..++..+...-+..+.....+.++..++..++.|+++|++++++......++..+|.++..++.|.+||+.
T Consensus 95 ~al------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 95 SAL------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHH------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 876 34555555555555555555566777999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCC
Q 011657 437 LFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~ 457 (480)
.|+..+++.++..+..+...|
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999888888787
No 120
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.52 E-value=1.6e-13 Score=130.17 Aligned_cols=165 Identities=19% Similarity=0.076 Sum_probs=127.7
Q ss_pred hhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh
Q 011657 290 QPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
........|.+.++.|. +..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+++... ++ .
T Consensus 21 ~~~~~~~~p~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~~-~ 93 (385)
T TIGR00710 21 IDMYLPAFPEIAADLST-PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-----NN-I 93 (385)
T ss_pred HHHhcccHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----cc-H
Confidence 33444556778888898 88999999999999999999999999999999999999888887777766542 22 3
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 449 (480)
..+....++.+.......+...+++.|.+|+++|+++.++.+....++..+++.+.+.+.+..+|+..+++.+++.++..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 33333333333333333455568899999999999999999999999999999999999999999999988887777666
Q ss_pred HhcCCCCCCCCC
Q 011657 450 AFIFXXXXXXXX 461 (480)
Q Consensus 450 ~~~~~~~~~~~~ 461 (480)
+..++..||+++
T Consensus 174 ~~~~~~~~~~~~ 185 (385)
T TIGR00710 174 ALIFFILPETLP 185 (385)
T ss_pred HHHHHhCCCCCC
Confidence 665555555443
No 121
>PRK10054 putative transporter; Provisional
Probab=99.52 E-value=1.9e-13 Score=129.42 Aligned_cols=161 Identities=7% Similarity=0.045 Sum_probs=119.4
Q ss_pred hhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCch
Q 011657 290 QPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVP 368 (480)
Q Consensus 290 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (480)
......+.+.++ ++.|. +..+.++..+...++.+++.++.|+++||+|||+++..+..+..++.+++.+. ++.
T Consensus 23 ~~~~~~~l~~~l~~~~g~-s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-----~~~ 96 (395)
T PRK10054 23 RGATLPFMTIYLSRQYSL-SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-----NNV 96 (395)
T ss_pred HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-----hHH
Confidence 344455555555 56788 88999999999999999999999999999999999988888777776655432 233
Q ss_pred hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHH
Q 011657 369 AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLS 448 (480)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 448 (480)
+..+....+.... .....+...++..|..|+++|+++.|+.+...++|..++|.+.+.+.+ .||+..|++.+++.++.
T Consensus 97 ~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~ 174 (395)
T PRK10054 97 TLVVLFFALINCA-YSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFP 174 (395)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHH
Confidence 3333322232222 223345566788999999999999999999999999999999998875 78999999888777766
Q ss_pred HHhcCCCCCC
Q 011657 449 LAFIFXXXXX 458 (480)
Q Consensus 449 ~~~~~~~~~~ 458 (480)
.+...+..++
T Consensus 175 ~i~~~~~~~~ 184 (395)
T PRK10054 175 LVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHhc
Confidence 5544433333
No 122
>TIGR00895 2A0115 benzoate transport.
Probab=99.52 E-value=1.3e-13 Score=131.47 Aligned_cols=164 Identities=17% Similarity=0.125 Sum_probs=126.8
Q ss_pred ChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCch
Q 011657 289 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVP 368 (480)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (480)
.......+.|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+++.. ..+
T Consensus 32 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~- 104 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGL-DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL-----ATN- 104 (398)
T ss_pred HHHHHHhhHHHHhhccCC-CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----ccc-
Confidence 344566778888888888 8889999999999999999999999999999999999888877777666543 122
Q ss_pred hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHH
Q 011657 369 AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLS 448 (480)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 448 (480)
...+....++.+.......+...+++.|.+|++.|+++.++.+....+|..+++.+.+.+.+..||+..+++.+++.++.
T Consensus 105 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 184 (398)
T TIGR00895 105 VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLL 184 (398)
T ss_pred hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHH
Confidence 33333333333443344456667899999999999999999999999999999999999999999998888876665555
Q ss_pred HHhcCCCCCCC
Q 011657 449 LAFIFXXXXXX 459 (480)
Q Consensus 449 ~~~~~~~~~~~ 459 (480)
.++.+...+|+
T Consensus 185 ~~~~~~~~~~~ 195 (398)
T TIGR00895 185 LLLLMRFLPES 195 (398)
T ss_pred HHHHHHhCCCC
Confidence 55544445554
No 123
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.52 E-value=2.6e-13 Score=128.48 Aligned_cols=159 Identities=16% Similarity=0.130 Sum_probs=124.8
Q ss_pred HHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHH
Q 011657 294 LYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVV 373 (480)
Q Consensus 294 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (480)
....|.+.++.|. ++.+.++..+...++..++.++.|++.||+|||+.+..+..+.+++.++... ..+.+..++
T Consensus 40 ~~~l~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~ 113 (394)
T PRK10213 40 VSLLTPMAQDLGI-SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF-----ANSFSLLLI 113 (394)
T ss_pred HhhHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH-----HChHHHHHH
Confidence 3356777888898 8899999999999999999999999999999999999999988887766543 223333333
Q ss_pred HHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcC
Q 011657 374 ALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 453 (480)
..+..+.......+...+++.|.+|+++|+.+.++.....+++..++|.+.+.+.+..||++.|++.+++.++..+...
T Consensus 114 -~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~ 192 (394)
T PRK10213 114 -GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWII 192 (394)
T ss_pred -HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333345666688899999999999999999999999999999999999999999999988877766555444
Q ss_pred CCCCCC
Q 011657 454 XXXXXX 459 (480)
Q Consensus 454 ~~~~~~ 459 (480)
...||+
T Consensus 193 ~~~p~~ 198 (394)
T PRK10213 193 KSLPSL 198 (394)
T ss_pred HHCCCC
Confidence 334553
No 124
>PRK03545 putative arabinose transporter; Provisional
Probab=99.52 E-value=2.3e-13 Score=129.16 Aligned_cols=159 Identities=18% Similarity=0.097 Sum_probs=125.0
Q ss_pred HHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 293 VLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 293 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
.....|.+.++.|. +..+.++..+...++..++.++.|++.||+|||+++..+..+..++.+..... ++.+. +
T Consensus 28 ~~~~~~~l~~~~~~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~-l 100 (390)
T PRK03545 28 PVGLLSDIAQSFHM-QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA-----WNFTV-L 100 (390)
T ss_pred HHcchHHHHhHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh-----ccHHH-H
Confidence 33456888889999 89999999999999999999999999999999999999988888887766542 23333 3
Q ss_pred HHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
....+..+.......+...+++.|.+|+++|+++.|+......++..++|.+.+.+.+..||++.|++.+++.++..+..
T Consensus 101 ~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 101 LISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334455567889999999999999999999999999999999999999999999999888777665554
Q ss_pred CCCCCC
Q 011657 453 FXXXXX 458 (480)
Q Consensus 453 ~~~~~~ 458 (480)
+...|+
T Consensus 181 ~~~~~~ 186 (390)
T PRK03545 181 IKLLPL 186 (390)
T ss_pred HHhCCC
Confidence 444444
No 125
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.50 E-value=4.6e-13 Score=130.76 Aligned_cols=179 Identities=13% Similarity=0.049 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHH
Q 011657 274 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 353 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 353 (480)
..+...++..+........+..-.|.+.++.|. +..+.++..+.+.++..++.++.|+++||+|||+++..+..+..++
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~-s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA-SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 344445555555555556777788999999988 8889999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeeccc-CChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 354 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEV-FPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
.++++. .++.+..+ ..-.+.+.......+.....+.+. .|+++|+++.|+......+|..++|.+.+.+.++.
T Consensus 85 ~~~~~~-----a~~~~~li-~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 85 SLAAAF-----SPTASWLI-ATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHHHH-----cCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 887764 23333333 333333333333444444455455 47799999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 433 GAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 433 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
||++.|++...++++..++.++..|+.
T Consensus 159 gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 159 YWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999998877777666655555554
No 126
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.50 E-value=2.7e-13 Score=132.81 Aligned_cols=171 Identities=17% Similarity=0.149 Sum_probs=134.2
Q ss_pred HHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHh
Q 011657 282 VLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYY 361 (480)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (480)
..+.............|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+++..
T Consensus 10 ~~~~~~~~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-- 86 (485)
T TIGR00711 10 GTFMAVLDSTIVNVAIPTIAGDLGS-SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV-- 86 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC--
Confidence 3333334445667788999999998 8889999999999999999999999999999999999998888887776653
Q ss_pred hccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHH
Q 011657 362 LFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAF 441 (480)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~ 441 (480)
..+...+....++.+.......+...+++.|.+|+++|+++.++......+|..++|.+.+.+.++.||++.|++.
T Consensus 87 ----~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~ 162 (485)
T TIGR00711 87 ----APNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN 162 (485)
T ss_pred ----cCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhh
Confidence 2333333444444444444455667789999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhcCCCCCCC
Q 011657 442 GVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~ 459 (480)
+.+.++..++.++..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 163 VPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hHHHHHHHHHHHHHcCCc
Confidence 777666655554445543
No 127
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.50 E-value=2.5e-13 Score=129.33 Aligned_cols=162 Identities=13% Similarity=0.039 Sum_probs=128.8
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
..+....|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+.++..++..++... .+.+
T Consensus 11 ~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~- 83 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGL-SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-----GAYV- 83 (399)
T ss_pred HhhhHhHHHHHHhhCC-ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----cCHH-
Confidence 3555667778888888 88999999999999999999999999999999999998888877777766542 2333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+....++.+.......+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+|++.|++.+++.++..+
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 33333333334344445666689999999999999999999999999999999999999999999999988887777666
Q ss_pred hcCCCCCCC
Q 011657 451 FIFXXXXXX 459 (480)
Q Consensus 451 ~~~~~~~~~ 459 (480)
..++..+++
T Consensus 164 ~~~~~~~~~ 172 (399)
T TIGR00893 164 LWLKFIPDP 172 (399)
T ss_pred HhhheecCC
Confidence 655545544
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=4e-13 Score=134.10 Aligned_cols=181 Identities=14% Similarity=0.030 Sum_probs=126.3
Q ss_pred hhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHH
Q 011657 271 CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI 350 (480)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 350 (480)
..+.+++.+++..+........+....|.+..+.+. +..+.+++.+...++.+++.++.|+++||+|||+.++++.++.
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl-s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI-PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 344444444444333333333456677888788888 8888999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH
Q 011657 351 VISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~ 430 (480)
+++.++..+. .+ ...+++..++.+....+..+...+++.|.+|++.|+...++.+++..+|.++++.+...+..
T Consensus 243 ~i~~ll~afa-----~s-~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 243 GFFAFFSSFV-----QG-YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred HHHHHHHHHH-----hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766665431 22 33333333333333334456777999999999999999999999999999998877665554
Q ss_pred hh-------------CccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 431 LL-------------GAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 431 ~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
.. +|++.+++.++.+++..++ .++.||.
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~-~~~lPES 357 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA-LTFMPES 357 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHHH-HHHcCCC
Confidence 33 4666666665555554443 3446665
No 129
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.49 E-value=7.3e-13 Score=126.62 Aligned_cols=180 Identities=13% Similarity=0.042 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHH
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 352 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 352 (480)
++.+....+..+.............|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+++..+.++..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 89 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL-TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSA 89 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3334444444444444555667777888888998 889999999999999999999999999999999999988888777
Q ss_pred HHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 353 SLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
+.++... ..+ ...+....++.+.......+...+++.|.+|+++|+.+.++.+....+|..+++.+.+.+.+..
T Consensus 90 ~~~~~~~-----~~~-~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 90 GTLACGF-----APG-YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHH-----hcc-HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7766553 123 3333333333333333444555688899999999999999999999999999999999888876
Q ss_pred C--ccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 433 G--AGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 433 g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
+ |+..+++.++..++..+. ....||++
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~~-~~~~~~~~ 192 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALWL-RKNIPEAE 192 (405)
T ss_pred CccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 6 888887765555544433 33345543
No 130
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.49 E-value=1.9e-12 Score=125.36 Aligned_cols=344 Identities=17% Similarity=0.188 Sum_probs=218.7
Q ss_pred HhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 011657 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (480)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 131 (480)
..+.++++..+..++....++..+..+.+. |+++..+.|++.+.+-++..+...+..+..-|.-|-+.+-+|+
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErR-------F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~ 169 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERR-------FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGL 169 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhh-------cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeech
Confidence 334555667778888878888888888877 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--------------------C---------------------------c----hH-HHHHHHHHHHH
Q 011657 132 LLYLVGALVTALA--------------------P---------------------------D----FI-IMVVGRFVFGI 159 (480)
Q Consensus 132 ~~~~~~~~~~~~~--------------------~---------------------------~----~~-~l~~~r~l~G~ 159 (480)
++++++++++++- + + ++ .++++.++.|+
T Consensus 170 ~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI 249 (735)
T KOG3626|consen 170 VLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI 249 (735)
T ss_pred hHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc
Confidence 9999999998762 0 0 12 56668899999
Q ss_pred HHhH------------------------------hHHhhhhhhhh--------h--------------hhhhHHHHhchh
Q 011657 160 GIGL------------------------------GGYGIGSLLVD--------L--------------VAGWRYMYGAST 187 (480)
Q Consensus 160 g~g~------------------------------~g~~~g~~l~~--------~--------------~~~wr~~f~~~~ 187 (480)
|... +||++|.++.. . ...|..-|++.+
T Consensus 250 G~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g 329 (735)
T KOG3626|consen 250 GATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICG 329 (735)
T ss_pred CCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHH
Confidence 8877 55555555542 1 114777788888
Q ss_pred HHHHHHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCC---ChhhHHHHHHhhhcccccccccHH
Q 011657 188 PLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS---APTEVDEILTELSYVGEDKEVSLR 264 (480)
Q Consensus 188 ~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 264 (480)
.+.++..+.++++|+..+--.+ + ...++.+..+.+.. .+..... .-++-....+
T Consensus 330 ~~~~~~a~p~f~fPk~lp~~~~-----------~-----~~~~~~~~~k~~~~~~~~~~~~~~-------~ikdfp~s~~ 386 (735)
T KOG3626|consen 330 ALLLFSAVPLFFFPKELPKSQK-----------R-----KRARDLHVLKTESGGAKSDKTFGK-------KIKDFPKSIK 386 (735)
T ss_pred HHHHHHHHHHHhCcccCccccc-----------c-----chhhhhcccccccccccCCcchhh-------hHHHHHHHHH
Confidence 8888877777778765321000 0 00000000000000 0000000 0001112334
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHH-HHHHHHHHHHHHHhhhc--Cc
Q 011657 265 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL-FKLIMTGLAVLVVERLG--RR 340 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g--~~ 340 (480)
.+++++ +++...+........+..+..|+|.|++. +|. ++..+..+....++ +..+|.+++|++..|+. .|
T Consensus 387 ~ll~N~----if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~-sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r 461 (735)
T KOG3626|consen 387 RLLSNP----IFMLVVLASVIESLAITGYITFLPKYLETQFGI-SASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSAR 461 (735)
T ss_pred HHhcCc----hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCC-CHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHH
Confidence 444443 44444555555555666778889988875 566 77777777755444 44578889999999875 34
Q ss_pred hHHHhhhHHHHHHHHHHHHHhhc---------------------------------------------------------
Q 011657 341 PLLLGGVSGIVISLFLLGSYYLF--------------------------------------------------------- 363 (480)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------------- 363 (480)
....+.++...++++.+...+..
T Consensus 462 ~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpCh 541 (735)
T KOG3626|consen 462 GAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCH 541 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhh
Confidence 45544444444444442221111
Q ss_pred --------c-------------C----C--------------c-hhHHHHHHHHHHHHHhcccccccceeecccCChhhh
Q 011657 364 --------L-------------D----D--------------V-PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLR 403 (480)
Q Consensus 364 --------~-------------~----~--------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 403 (480)
. . . . ....++..++..+....+..|.. .++...+|++.|
T Consensus 542 AGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~-~i~LR~V~~e~k 620 (735)
T KOG3626|consen 542 AGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGM-LIVLRCVPPEEK 620 (735)
T ss_pred hCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcce-EEEEEccCchhc
Confidence 0 0 0 0 11222223333333344444444 788888999999
Q ss_pred hhHHHHHHHH-HHHHHHhHhhcchhhHHh
Q 011657 404 GRGLSVAVLV-NFGANALVTFAFSPLKDL 431 (480)
Q Consensus 404 ~~~~~~~~~~-~~~g~~i~~~~~~~~~~~ 431 (480)
..++|+..++ +-+|.+-+|.++|+++|.
T Consensus 621 s~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 621 SFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred hhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 9999999887 677889999999999985
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.49 E-value=5.1e-13 Score=127.64 Aligned_cols=163 Identities=19% Similarity=0.045 Sum_probs=124.1
Q ss_pred hhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh
Q 011657 290 QPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
........|.+.++.+. ++.+.++..+...++..++.++.|+++||+|||+++..+..+..++.+++.. ..+.+
T Consensus 31 ~~~~~~~~~~~~~~~~~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~~~~ 104 (406)
T PRK11551 31 LQSAGVAAPRMAQEFGL-DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ-----AWDFP 104 (406)
T ss_pred HHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH-----hccHH
Confidence 34556667888888898 8899999999999999999999999999999999999988777776665543 22333
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 449 (480)
..++.. ++.+.......+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+|+..+++.+++.++..
T Consensus 105 ~~~~~~-~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (406)
T PRK11551 105 SLLVAR-LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLV 183 (406)
T ss_pred HHHHHH-HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHH
Confidence 333333 3333333333455668899999999999999999999999999999988888888889988888776655555
Q ss_pred HhcCCCCCCC
Q 011657 450 AFIFXXXXXX 459 (480)
Q Consensus 450 ~~~~~~~~~~ 459 (480)
++.....+|+
T Consensus 184 ~~~~~~l~~~ 193 (406)
T PRK11551 184 PLLMRWLPES 193 (406)
T ss_pred HHHHHhCCCC
Confidence 5444445554
No 132
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=2.1e-13 Score=122.09 Aligned_cols=179 Identities=13% Similarity=0.084 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHH
Q 011657 274 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 353 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 353 (480)
.+++...+.+...+..-..++.-.|.+.++.++ +..|.+.+.+...+...++-.+.|.++||.+.|..+.+++++.++.
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l-sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~ 107 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL-SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIV 107 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHH
Confidence 334444444444433344566677888888888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc--hhhHHh
Q 011657 354 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF--SPLKDL 431 (480)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~--~~~~~~ 431 (480)
.+++++ .++...+.++..+.+.++..-.|.+...+..-+|+++||+..++-|...++|+++.|.+. +.+.++
T Consensus 108 nil~Gf------s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 108 NILFGF------SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHhh------hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999886 235555555555666655555566668899999999999999999999999999999999 888888
Q ss_pred hCccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 432 LGAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 432 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
.+|+..|++-++++++..++.++..+++
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8999999999999888887777666544
No 133
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.48 E-value=3.8e-13 Score=125.97 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=123.3
Q ss_pred HHHHhHH-HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 292 SVLYYAA-SILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 292 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
......| .+.++.|. +..+.++..+...++..++.++.|+++||+|||+++..+.++.+++..+..+ ..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-----~~~~~- 86 (352)
T PF07690_consen 14 IISPALPLYLAEELGL-SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF-----ASNFW- 86 (352)
T ss_dssp HHHHHHH-HHHCCSTT-TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH-----HCCHH-
T ss_pred HHHHHHHHHHHHccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh-----hhhHH-
Confidence 4455566 66677888 8999999999999999999999999999999999999998888888444432 13344
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+....++.+.......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|+..+++.+++.++..+
T Consensus 87 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 87 LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 44444444444444455677789999999999999999999999999999999999999889999999999998888876
Q ss_pred h
Q 011657 451 F 451 (480)
Q Consensus 451 ~ 451 (480)
+
T Consensus 167 l 167 (352)
T PF07690_consen 167 L 167 (352)
T ss_dssp H
T ss_pred h
Confidence 5
No 134
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.48 E-value=6.2e-13 Score=126.35 Aligned_cols=169 Identities=13% Similarity=0.093 Sum_probs=127.6
Q ss_pred HHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhcc
Q 011657 285 QQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFL 364 (480)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (480)
....+........|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+..+..++..++..
T Consensus 14 ~~~~~~~~~~~~lp~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~----- 87 (392)
T PRK10473 14 LYPAGIDMYLVGLPRIAADLNA-SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL----- 87 (392)
T ss_pred HHHHHHHHHhhhHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH-----
Confidence 3333444555678888889888 8888999999999999999999999999999999999888887777766543
Q ss_pred CCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHH
Q 011657 365 DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVI 444 (480)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~ 444 (480)
..+.+..+... ++.+.......+...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+..||+..+++.+++
T Consensus 88 ~~~~~~~~~~~-~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~ 166 (392)
T PRK10473 88 AETSSLFLAGR-FLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAM 166 (392)
T ss_pred hCcHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHH
Confidence 12223323222 23333333333455678899999999999999999999999999999988888888999989888877
Q ss_pred HHHHHHhcCCCCCCCC
Q 011657 445 AVLSLAFIFXXXXXXX 460 (480)
Q Consensus 445 ~~~~~~~~~~~~~~~~ 460 (480)
.++..++.+...+|++
T Consensus 167 ~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 167 GILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHcCCCC
Confidence 7766665544455544
No 135
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.47 E-value=2.4e-13 Score=128.59 Aligned_cols=162 Identities=16% Similarity=0.112 Sum_probs=126.1
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
..+....|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+++... . +..
T Consensus 12 ~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~-~~~ 84 (379)
T TIGR00881 12 KNFALAMPYLVEEIGL-SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-----T-SLW 84 (379)
T ss_pred HhhhhhhHHHHHHhCC-CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-----h-hHH
Confidence 4556677888888898 88999999999999999999999999999999999999988888877776542 2 333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh-hcchhhHHhhCccHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT-FAFSPLKDLLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~ 449 (480)
.+....++.+.......+...+++.|.+|+++|+.+.++.+....+|..+++ .+.+.+.+..+|+..+++.+++.++..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVS 164 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 3333334444444445567778999999999999999999999999999999 466666677889998888887776665
Q ss_pred HhcCCCCCCC
Q 011657 450 AFIFXXXXXX 459 (480)
Q Consensus 450 ~~~~~~~~~~ 459 (480)
++.+...+++
T Consensus 165 ~~~~~~~~~~ 174 (379)
T TIGR00881 165 LICFLLLRDS 174 (379)
T ss_pred HHHheeeCCC
Confidence 5555545443
No 136
>PRK10504 putative transporter; Provisional
Probab=99.47 E-value=1.2e-12 Score=127.67 Aligned_cols=168 Identities=13% Similarity=0.081 Sum_probs=127.7
Q ss_pred HHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhc
Q 011657 284 FQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLF 363 (480)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (480)
+........+..+.|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+++..+..+..++.++...
T Consensus 20 ~~~~~~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~---- 94 (471)
T PRK10504 20 FMQSLDTTIVNTALPSMAQSLGE-SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL---- 94 (471)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH----
Confidence 33333445667788999999998 8888889999999999999999999999999999998887777766665443
Q ss_pred cCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHH
Q 011657 364 LDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGV 443 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~ 443 (480)
..+.+..+ ...++.+.......+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||++.|++...
T Consensus 95 -~~~~~~l~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~ 172 (471)
T PRK10504 95 -SGTLNELL-LARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIP 172 (471)
T ss_pred -hCCHHHHH-HHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHH
Confidence 22333333 3333333333334556667889999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHhcCCCCCC
Q 011657 444 IAVLSLAFIFXXXXX 458 (480)
Q Consensus 444 ~~~~~~~~~~~~~~~ 458 (480)
+..+..+......++
T Consensus 173 ~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 173 VGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHhCCC
Confidence 666665555444443
No 137
>PRK03699 putative transporter; Provisional
Probab=99.46 E-value=2.6e-12 Score=121.95 Aligned_cols=156 Identities=15% Similarity=0.071 Sum_probs=118.7
Q ss_pred hhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh
Q 011657 290 QPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
........|.+.++.+. +..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.++... .++.+
T Consensus 23 ~~~~g~~~~~i~~~~~~-s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~-----~~~~~ 96 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNL-PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF-----SHSLA 96 (394)
T ss_pred HHHHhhhhHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-----cchHH
Confidence 34566677888888888 8889999999999999999999999999999999998888877777766654 22333
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-hhCccHHHHHHHHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-LLGAGILFYAFGVIAVLS 448 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 448 (480)
..++...+.+.+.+ ...+....++.|.+|+++|+.+.+..+....+++.++|.+.+.+.+ ..||++.|.+.+++.++.
T Consensus 97 ~~~~~~~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~ 175 (394)
T PRK03699 97 LFSIAMFVLGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAI 175 (394)
T ss_pred HHHHHHHHHHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 33333333333333 3334555788999999999999999988888999999999888765 468999998888776665
Q ss_pred HHhc
Q 011657 449 LAFI 452 (480)
Q Consensus 449 ~~~~ 452 (480)
.++.
T Consensus 176 ~~~~ 179 (394)
T PRK03699 176 FILT 179 (394)
T ss_pred HHHH
Confidence 5443
No 138
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.46 E-value=9.1e-13 Score=124.54 Aligned_cols=161 Identities=16% Similarity=0.090 Sum_probs=125.1
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
......|.+.++.|. +..+.++..+...++..++.++.|++.||+|||+++..+..+.+++.++... .++.+..
T Consensus 21 ~~~~~l~~~~~~~g~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-----~~~~~~l 94 (382)
T PRK10091 21 GIMGVLTELAHDVGI-SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-----SSSYLML 94 (382)
T ss_pred HHHhChHHHHHHcCC-CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH-----hCcHHHH
Confidence 555577888888898 8889999999999999999999999999999999999998888888776654 2333333
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
++.. ++.+.......+....++.|.+|+++|+.+++.......++..+++.+.+.+.+..||++.|++.+++.++..+.
T Consensus 95 ~~~r-~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 95 AIGR-LVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHH-HHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 3333 333333222334445677889998899999999999999999999999999999899999999988877666555
Q ss_pred cCCCCCCC
Q 011657 452 IFXXXXXX 459 (480)
Q Consensus 452 ~~~~~~~~ 459 (480)
.+...||.
T Consensus 174 ~~~~lp~~ 181 (382)
T PRK10091 174 IYFWVPDI 181 (382)
T ss_pred HHHhCCCC
Confidence 44445554
No 139
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.45 E-value=1.3e-12 Score=124.49 Aligned_cols=162 Identities=12% Similarity=0.118 Sum_probs=123.0
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
...--.|.+.++.+. +..+.++..+...++..++.++.|+++||+|||+++..+..+..++.++... .++.+..
T Consensus 34 ~~~p~l~~i~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l 107 (413)
T PRK15403 34 LIQPGIINVVRDFNA-DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF-----TTSMTQF 107 (413)
T ss_pred hhccCHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH-----cCCHHHH
Confidence 333344566677888 8888999999999999999999999999999999999988887777766553 2333333
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
++ .-++.+.......+....+..|.+|++++++++++.+....++..++|.+.+.+.+..||++.|++.+++.++..+.
T Consensus 108 ~~-~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 108 LI-ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 33 33333332222334455778899999999999999999999999999999999988889999999988887777665
Q ss_pred cCCCCCCCC
Q 011657 452 IFXXXXXXX 460 (480)
Q Consensus 452 ~~~~~~~~~ 460 (480)
.++..||++
T Consensus 187 ~~~~lp~~~ 195 (413)
T PRK15403 187 LLLAMPETV 195 (413)
T ss_pred HHHhCCCCc
Confidence 444456654
No 140
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.45 E-value=2e-12 Score=123.45 Aligned_cols=179 Identities=16% Similarity=0.129 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHH
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISL 354 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 354 (480)
..+...+..+........+....|.+.++.+. +..+.++..+...++..++.++.|+++||+|||+++..+..+..++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~ 92 (406)
T PRK15402 14 FPLCLVLFEFATYIANDMIQPGMLAVVEDFNA-GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTC 92 (406)
T ss_pred HHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 33333333333333334444556777788888 88899999999999999999999999999999999998887777776
Q ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCc
Q 011657 355 FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGA 434 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~ 434 (480)
+..... .+.+ .+....++.+.......+...+.+.|.+|++.|..+.++......++..++|.+.+.+.+..+|
T Consensus 93 ~~~~~~-----~~~~-~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 93 LAILLA-----QSIE-QFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHH-----ccHH-HHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 665431 2222 2333333333322233345567888999999999999999888888999999999999998999
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 435 GILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
++.+++.+++.++..+..+...||++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999888887776665544456554
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.45 E-value=1.8e-12 Score=121.97 Aligned_cols=161 Identities=14% Similarity=0.022 Sum_probs=123.5
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
.......|.+..+.+. +..+.++..+...++..++.++.|+++||+|||+++..+..+..++.+++........ .+.+
T Consensus 16 ~~~~~~~~~~~~~~~~-s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 93 (365)
T TIGR00900 16 AITQVALPLYVLAGTG-SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG-LNIW 93 (365)
T ss_pred HHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC-CcHH
Confidence 3455566777788887 8889999999999999999999999999999999999888877776666554322111 1333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+....++.+.......+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..+++.++..++..+
T Consensus 94 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 173 (365)
T TIGR00900 94 QVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISAL 173 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33333333344444445666689999999999999999999999999999999999999999999988887776665554
Q ss_pred hcC
Q 011657 451 FIF 453 (480)
Q Consensus 451 ~~~ 453 (480)
..+
T Consensus 174 ~~~ 176 (365)
T TIGR00900 174 LIV 176 (365)
T ss_pred HHH
Confidence 443
No 142
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.45 E-value=1.1e-12 Score=126.39 Aligned_cols=164 Identities=13% Similarity=0.062 Sum_probs=116.8
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
.+....|.+. +.|. ++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+++.... ....+...
T Consensus 45 ~~~~~~p~~~-~~g~-s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 120 (438)
T TIGR00712 45 NFALAMPYLV-EQGF-SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVP--WATSSIAI 120 (438)
T ss_pred cHHhhhHHHH-HcCC-CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccc--cccchHHH
Confidence 3445566655 4577 889999999999999999999999999999999998888777777766554311 01122222
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-hhCccHHHHHHHHHHHHHHH
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-LLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 450 (480)
+....+..+.......+.....+.|.+|+++|+++.|+.+....+++.+++.+.+...+ ..+|+..|++.++++++..+
T Consensus 121 l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 121 MFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 22222223333322334444778899999999999999999999999999988776554 46899999998887777655
Q ss_pred hcCCCCCCC
Q 011657 451 FIFXXXXXX 459 (480)
Q Consensus 451 ~~~~~~~~~ 459 (480)
+.+++.+|+
T Consensus 201 ~~~~~~~~~ 209 (438)
T TIGR00712 201 FAFAMMRDT 209 (438)
T ss_pred HHHHhccCC
Confidence 544445543
No 143
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=2.9e-12 Score=124.32 Aligned_cols=158 Identities=11% Similarity=0.034 Sum_probs=114.0
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
.....+.|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+++..+.++..++.++.... .+.+.
T Consensus 53 ~~~~~~~~~l~~~~gl-s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~s~~~ 126 (476)
T PLN00028 53 FAAAPLLPIIRDNLNL-TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV-----SSATG 126 (476)
T ss_pred HHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-----cCHHH
Confidence 3455567788888998 88888998888999999999999999999999999988887777776655431 23333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH---------hhCccHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD---------LLGAGILFYAF 441 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~---------~~g~~~~~~~~ 441 (480)
.++..++ .+.......+ ...++.|.+|+++|+.+.|+.+...++|+.+++.+.+.+.. ..||++.|++.
T Consensus 127 l~~~r~l-~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~ 204 (476)
T PLN00028 127 FIAVRFF-IGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVP 204 (476)
T ss_pred HHHHHHH-HHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHH
Confidence 3222222 2322223333 33567899999999999999998888888887776655432 24899999998
Q ss_pred HHHHHHHHHhcCCCC
Q 011657 442 GVIAVLSLAFIFXXX 456 (480)
Q Consensus 442 ~~~~~~~~~~~~~~~ 456 (480)
+++.++..++.+++.
T Consensus 205 g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 205 GLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHc
Confidence 888776665555443
No 144
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=2.4e-12 Score=123.37 Aligned_cols=186 Identities=12% Similarity=0.008 Sum_probs=131.1
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 263 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
++.+.+++.++..++...+..+ +........|.+.++.+. ++.+.++..+...++..++.++.|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~ 84 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIF----GLGLLGVAVPVQIQMMTG-STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL 84 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE
Confidence 3444455665555444333333 233556677888888887 88899999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
+..+..+.+++...+...... ..++.+.+....+..+.......+...+++.|.+|+++|+++.++.+....+|..++|
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFL-PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 888877776666554322111 1223333333333322222222344457888999999999999999999999999999
Q ss_pred hcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 423 FAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 423 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.+.+.+.+..++++.+++.++..++..+..+.
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999889988888877766666555443
No 145
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2e-13 Score=123.52 Aligned_cols=181 Identities=16% Similarity=0.134 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
...+.+....+..--+.+....+..-+.++. +....|++.....+...+++++.|++.||++|++++.+|..+-.++.+
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~v~~~fni-~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKEVQTYFNI-SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC-CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence 3334444444444444555555555566677 888999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-c
Q 011657 356 LLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-A 434 (480)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-~ 434 (480)
+.++. ...+.+.++-.+.+..-..+.|+..++++|.+|.++|++.+++.++...+|..+|-...+.+.+..+ |
T Consensus 114 ~~~fs------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 114 ASGFS------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred HHHHH------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 87752 5555666666666666777888999999999999999999999999999999998888888888777 9
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q 011657 435 GILFYAFGVIAVLSLAFIFXXXXXXXXSF 463 (480)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (480)
++.|.+.+++.++..++.+++.+|..++.
T Consensus 188 r~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 99999999999988888887777765543
No 146
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.44 E-value=2.6e-12 Score=124.16 Aligned_cols=163 Identities=15% Similarity=0.083 Sum_probs=112.6
Q ss_pred HHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 293 VLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 293 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
+....|.+.++ |. +..+.++..+...++..++.++.|+++||+|||+++..+.++.+++.+++.+... ...+...+
T Consensus 48 ~~~~~p~l~~~-g~-s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~--~~~~~~~~ 123 (452)
T PRK11273 48 FALAMPYLVEQ-GF-SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW--ATSSIAVM 123 (452)
T ss_pred HHHhhHHHHHc-CC-CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc--ccccHHHH
Confidence 45566776666 87 8899999999999999999999999999999999999988888877776654211 11223232
Q ss_pred HHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHh-HhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANAL-VTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
.....+.+.......+.....+.|.+|+++|++++|+.+....+|+.+ ++.+...+....||+..|++.+++.++..++
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 332233333333333444467788899999999999999988888654 4443333333458888998888776665555
Q ss_pred cCCCCCCC
Q 011657 452 IFXXXXXX 459 (480)
Q Consensus 452 ~~~~~~~~ 459 (480)
.+++.+|+
T Consensus 204 ~~~~~~~~ 211 (452)
T PRK11273 204 AFAMMRDT 211 (452)
T ss_pred HHHHccCC
Confidence 44444543
No 147
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.44 E-value=1.6e-12 Score=123.76 Aligned_cols=157 Identities=13% Similarity=0.101 Sum_probs=116.1
Q ss_pred hhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh-cCchHHHhhhHHHHHHHHHHHHHhhccCCc
Q 011657 290 QPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-GRRPLLLGGVSGIVISLFLLGSYYLFLDDV 367 (480)
Q Consensus 290 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (480)
++....++|.++.+ .|+ +..+++...........++.+++|+++||+ |||+.+.++.++..++.+++... ...
T Consensus 25 ~Yg~~~~L~~yL~~~lgl-s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~----~~~ 99 (493)
T PRK15462 25 FYGMRALLILYLTNQLKY-DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS----EIH 99 (493)
T ss_pred HHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh----hcc
Confidence 34555667777654 678 888899999999999999999999999999 99999999998888887655421 111
Q ss_pred hhHHHHHHHHHHHHHhcccccccceeecccCChh--hhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHH
Q 011657 368 PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLR--LRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIA 445 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 445 (480)
.........+...+ .....+...+++.|.+|++ .|.++.++.+...++|+.++|.+.+++.+..||+..|.+.++..
T Consensus 100 ~~~~~l~l~li~iG-~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm 178 (493)
T PRK15462 100 PSFLYLSLAIIVCG-YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGM 178 (493)
T ss_pred hhHHHHHHHHHHHh-cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHH
Confidence 12222222222222 2223355557899999875 79999999999999999999999999999999999998876655
Q ss_pred HHHHHhc
Q 011657 446 VLSLAFI 452 (480)
Q Consensus 446 ~~~~~~~ 452 (480)
+++.+..
T Consensus 179 ~l~li~~ 185 (493)
T PRK15462 179 IAGLVIF 185 (493)
T ss_pred HHHHHHH
Confidence 5554443
No 148
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.44 E-value=2.4e-12 Score=123.83 Aligned_cols=158 Identities=13% Similarity=0.090 Sum_probs=120.7
Q ss_pred HHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHH
Q 011657 281 LVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSY 360 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (480)
+..+.............|.+.++.|. ++.+.++..+...++..++.++.|+++||+|||+++..+.++.+++.++....
T Consensus 25 ~~~~~~~~~~~~~~~~~~~i~~~~~~-s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 103 (426)
T PRK12307 25 LGYVFDGFDFMLIFYIMYLIKADLGL-TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA 103 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444556667777788888 88899999999999999999999999999999999999998888887766542
Q ss_pred hhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHH
Q 011657 361 YLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYA 440 (480)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~ 440 (480)
++ ...+....++.+.......+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..||++.+++
T Consensus 104 -----~~-~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 104 -----SG-VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred -----hH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 22 333333333333333334455567889999999999999999999999999999998888888899998887
Q ss_pred HHHHH
Q 011657 441 FGVIA 445 (480)
Q Consensus 441 ~~~~~ 445 (480)
.....
T Consensus 178 ~~~~~ 182 (426)
T PRK12307 178 GLLPV 182 (426)
T ss_pred HHHHH
Confidence 54433
No 149
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.43 E-value=2.7e-12 Score=122.09 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=120.2
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
......|.+.++.+. ++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+.... .++ ...
T Consensus 26 ~~~p~~~~i~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~-----~~~-~~~ 98 (394)
T PRK11652 26 IYVPAIADMARDLNV-REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF-----AHS-LTV 98 (394)
T ss_pred HHhccHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-----Hcc-HHH
Confidence 334456778888999 8899999999999999999999999999999999999888877777666543 122 223
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
+....++.+.......+....+..|.++.+.++.+.+..+....++..++|.+.+.+.+..||+..|++.+++.++..+.
T Consensus 99 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 99 LIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 33333333322222234444677888888899999999999999999999999999999899999998887766655444
Q ss_pred cCCCCCCCC
Q 011657 452 IFXXXXXXX 460 (480)
Q Consensus 452 ~~~~~~~~~ 460 (480)
..+..||++
T Consensus 179 ~~~~~~~~~ 187 (394)
T PRK11652 179 MARWMPETR 187 (394)
T ss_pred HHHhCCccC
Confidence 444455543
No 150
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.43 E-value=3.4e-12 Score=117.43 Aligned_cols=155 Identities=17% Similarity=0.145 Sum_probs=120.4
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
.+.+++--.+++.+. .+.--|........+.++..++.+++++|+|+-+++..++.+..+-++.+..+ .++|..
T Consensus 389 lv~tFLfWHled~~~-~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-----~n~W~v 462 (618)
T KOG3762|consen 389 LVFTFLFWHLEDLGG-IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-----QNPWMV 462 (618)
T ss_pred HHHHHHHHHHhhcCC-cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-----cCchhe
Confidence 344444445677776 67777788888888999999999999999999999999888888877776652 455555
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHH-HHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV-NFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
+..-++-+......+..+. +|++...|++.++++.++.... ..+|-.+|+++.|.+.+.+|.+..|.++++.+++.++
T Consensus 463 LPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 463 LPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred eeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 5444444455555554444 8999999999999999999877 5788899999999999999999999988887777665
Q ss_pred hcC
Q 011657 451 FIF 453 (480)
Q Consensus 451 ~~~ 453 (480)
...
T Consensus 542 ~~~ 544 (618)
T KOG3762|consen 542 LFI 544 (618)
T ss_pred HHH
Confidence 543
No 151
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.43 E-value=3.3e-12 Score=121.27 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=119.4
Q ss_pred HHhHH-HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 294 LYYAA-SILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 294 ~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
..+.+ ++.++.|. +..+.++......+...+..++.|+++||+|||+++..+..+..++.+.+.. .++.+...
T Consensus 30 ~~~~~~~~~~~~g~-s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~-----~~~~~~l~ 103 (400)
T PRK11646 30 FPLISIRFVDQLGW-AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI-----AHEPWLLW 103 (400)
T ss_pred HHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-----hccHHHHH
Confidence 33444 44567788 8999999999999999999999999999999999999999888888877654 23333333
Q ss_pred HHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
+ ..+..+.......|...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+. ..||++.|++.+.+.++..++.
T Consensus 104 ~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 104 L-SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH
Confidence 3 3333333333344555678899999999999999999999999999999999998 6799998988877766655443
Q ss_pred CCCCCC
Q 011657 453 FXXXXX 458 (480)
Q Consensus 453 ~~~~~~ 458 (480)
.+..+|
T Consensus 182 ~~~~~~ 187 (400)
T PRK11646 182 AWLLPA 187 (400)
T ss_pred HHhCCc
Confidence 333444
No 152
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.42 E-value=1.9e-12 Score=120.75 Aligned_cols=162 Identities=12% Similarity=0.036 Sum_probs=119.6
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
..+....|.+.++.+. +..+.++..+...++..++.+..|+++||+|||+++.........+..... ...+..
T Consensus 8 ~~~~~~lp~i~~~~~~-s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~------~~~~~~ 80 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDV-SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL------DPFNYE 80 (368)
T ss_pred HHHHhhHHHHHHHhCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH------HhccHH
Confidence 3556678888899999 889999999999999999999999999999998876654444333322111 112333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+...-++.+...... +.......|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 3333333333333222 233355689999999999999999999999999999999999999999999998888777766
Q ss_pred hcCCCCCCCC
Q 011657 451 FIFXXXXXXX 460 (480)
Q Consensus 451 ~~~~~~~~~~ 460 (480)
+.++..||.+
T Consensus 160 ~~~~~lp~~p 169 (368)
T TIGR00903 160 LVLAALPALP 169 (368)
T ss_pred HHHHHcCCCC
Confidence 6666666654
No 153
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.41 E-value=3.2e-12 Score=123.66 Aligned_cols=157 Identities=14% Similarity=0.099 Sum_probs=120.2
Q ss_pred hChhHHHHhHHHHHHh---cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh-hcCchHHHhhhHHHHHHHHHHHHHhhc
Q 011657 288 TGQPSVLYYAASILQS---AGFSAASDATRVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLF 363 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (480)
.+++....++|.|+++ .|. +..+++.......++..++.+++|+++|| +|||+++..+..+.+++.+++..
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~-s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~---- 98 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGF-SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM---- 98 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh----
Confidence 3444556667777765 677 88899999999999999999999999999 89999999999998888877654
Q ss_pred cCCchhHHHHHHHHHHHHHhcccccccceeecccCChhh---hhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHH
Q 011657 364 LDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRL---RGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYA 440 (480)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~ 440 (480)
..+.+...+... +.+.......+...+++.|.+|++. |+++.++.+...++|..++|.+.+.+.++.||+..|.+
T Consensus 99 -~~~~~~~~~~~~-l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~ 176 (475)
T TIGR00924 99 -SIYPDLIFYGLG-TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNL 176 (475)
T ss_pred -cccHhHHHHHHH-HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 122222322222 3333333445566678888888654 88899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh
Q 011657 441 FGVIAVLSLAF 451 (480)
Q Consensus 441 ~~~~~~~~~~~ 451 (480)
.++..+++.+.
T Consensus 177 ~~~~~~~~~l~ 187 (475)
T TIGR00924 177 AAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHH
Confidence 77655555444
No 154
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.40 E-value=1.9e-14 Score=139.16 Aligned_cols=348 Identities=18% Similarity=0.199 Sum_probs=2.7
Q ss_pred HhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 011657 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (480)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 136 (480)
.++..+......+.++..+..+++. |+++..+.|++.+.+-++..+..++..++.+|..|-|.+-+|.+++++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErR-------F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERR-------FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 3444455566677778888888887 999999999999999999999999999999998888889999999999
Q ss_pred HHHHHHhc----C----------------------------------------------chHHHHHHHHHHHHHHhH---
Q 011657 137 GALVTALA----P----------------------------------------------DFIIMVVGRFVFGIGIGL--- 163 (480)
Q Consensus 137 ~~~~~~~~----~----------------------------------------------~~~~l~~~r~l~G~g~g~--- 163 (480)
|++++++= . -+..++++.++.|+|...
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 99887641 0 025667788889988887
Q ss_pred ---------------------------hHHhhhhhh----hhhh-----------------h----hhHHHHhchhHHHH
Q 011657 164 ---------------------------GGYGIGSLL----VDLV-----------------A----GWRYMYGASTPLAV 191 (480)
Q Consensus 164 ---------------------------~g~~~g~~l----~~~~-----------------~----~wr~~f~~~~~~~~ 191 (480)
+||.+|.++ ...+ + .|-.-|++.+++.+
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~ 240 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLF 240 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 555554443 3110 1 25555666666666
Q ss_pred HHHHHHhcccCchHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhh
Q 011657 192 IMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC 271 (480)
Q Consensus 192 ~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (480)
+..+.++++|+..+-..+ ..++.+...++. .+...+...+. +..+.....-+.-....+.+++|+.
T Consensus 241 l~aipl~~FPk~lp~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~df~~~l~~Ll~Np~ 306 (539)
T PF03137_consen 241 LSAIPLFFFPKKLPGTSE-----------RQEEKESSERKE--EDSDKDSFKDP-KSKKSFGKSIKDFPKALKRLLTNPV 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHcCCccCCCccc-----------ccchhhhhhcch--hhhhhhccccc-ccccchhhhhhhHHHHHHHHhcChH
Confidence 655556666654221100 000000000000 00000000000 0000000011122334455555553
Q ss_pred hhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHH-HHHHHHHHHHHHHhhhc--CchHHHhhh
Q 011657 272 LKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL-FKLIMTGLAVLVVERLG--RRPLLLGGV 347 (480)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g--~~~~~~~~~ 347 (480)
++...+...........+..+.|.|++. ++. ++.++.++.....+ +..+|.+++|++.+|++ .|..+.+..
T Consensus 307 ----f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~-sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~ 381 (539)
T PF03137_consen 307 ----FMCLILAGVFESFIVSGFATFLPKYLESQFGL-SASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCI 381 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHH
Confidence 3333333444444455777788888875 455 77777777655554 66688899999999875 344444444
Q ss_pred HHHHHHHHHHHHHhhc-------------c---------------------------------CC--chhH-HHHHHHHH
Q 011657 348 SGIVISLFLLGSYYLF-------------L---------------------------------DD--VPAV-AVVALLLY 378 (480)
Q Consensus 348 ~~~~~~~~~~~~~~~~-------------~---------------------------------~~--~~~~-~~~~~~~~ 378 (480)
+...++.+.+...+.. . .+ .... .++..++.
T Consensus 382 v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~ 461 (539)
T PF03137_consen 382 VVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFIL 461 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHH
Confidence 4444443331111110 0 00 0111 22222222
Q ss_pred HHHHhcccccccceeecccCChhhhhhHHHHHHHH-HHHHHHhHhhcchhhHHh
Q 011657 379 VGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLV-NFGANALVTFAFSPLKDL 431 (480)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~g~~i~~~~~~~~~~~ 431 (480)
.........|.. ...-..+|+++|+.|.|+...+ +-+|.+-+|.++|.++|.
T Consensus 462 ~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 462 SFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 333334444554 5667888999999999999887 567889999999999986
No 155
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.40 E-value=4.6e-12 Score=122.29 Aligned_cols=159 Identities=13% Similarity=0.024 Sum_probs=117.9
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
..+..+.+.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.++.+.++..++.+++... .+.+.
T Consensus 36 ~~~~~~~~~i~~~~g~-s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~~ 109 (455)
T TIGR00892 36 KAVTVFFKELQQIFQA-TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS-----SNVIE 109 (455)
T ss_pred cchhhhHHHHHHHhCc-chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh-----hhHHH
Confidence 3456677888899999 88889999999988899999999999999999999998887777777665431 22222
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+....++.+.......+....++.+.+| ++|+++.|+.+....+|..++|.+.+.+.+..||++.|++.+++.++..+
T Consensus 110 l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 110 LYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 22222122222222222333466778886 78999999999999999999999999999999999999999887766555
Q ss_pred hcCCCC
Q 011657 451 FIFXXX 456 (480)
Q Consensus 451 ~~~~~~ 456 (480)
..++..
T Consensus 189 ~~~~~~ 194 (455)
T TIGR00892 189 CGALMR 194 (455)
T ss_pred HHHHhC
Confidence 443333
No 156
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.39 E-value=2.5e-12 Score=121.59 Aligned_cols=161 Identities=17% Similarity=0.138 Sum_probs=125.3
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
......|.+.++.|. ++.+.++..+...++..++.++.|+++||+|||+.+..+.++..++..++... .+.+..
T Consensus 9 ~~~p~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAADFGV-SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-----QTIDQL 82 (377)
T ss_pred HHhccHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-----ccHHHH
Confidence 334466777788888 88999999999999999999999999999999999999888888877776542 223333
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
.. ..++.+.......+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..+++.+.+.++..++
T Consensus 83 ~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 83 IY-MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 33 33333333333445556788999999999999999999999999999999999999999999998888777776655
Q ss_pred cCCCCCCC
Q 011657 452 IFXXXXXX 459 (480)
Q Consensus 452 ~~~~~~~~ 459 (480)
..+..+|+
T Consensus 162 ~~~~~~~~ 169 (377)
T PRK11102 162 VFFFIPET 169 (377)
T ss_pred HHHhCCcc
Confidence 54445554
No 157
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.39 E-value=8.9e-12 Score=119.22 Aligned_cols=160 Identities=19% Similarity=0.207 Sum_probs=119.1
Q ss_pred hHHHHhHHHHHHhcCCCCCcc-----hHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC
Q 011657 291 PSVLYYAASILQSAGFSAASD-----ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD 365 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (480)
.....+.|.+.++.|. +..+ .+...+...+...++.++.|+++||+|||+.+..+.....++.+++.. .
T Consensus 31 ~~~~~~l~~~~~~~g~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~ 104 (408)
T PRK09874 31 SLVMPFLPLYVEQLGV-TGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL-----A 104 (408)
T ss_pred HHhhhhHHHHHHHhCC-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH-----H
Confidence 3455677888888887 5443 377888899999999999999999999999998888777776665543 1
Q ss_pred CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHH
Q 011657 366 DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIA 445 (480)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 445 (480)
.+.+..+ ...++.+... +..+....++.+.+|+++|+.+.++.+....+|..++|.+.+.+.+..+|+..+++.+++.
T Consensus 105 ~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (408)
T PRK09874 105 QNIWQFL-ILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVL 182 (408)
T ss_pred hhHHHHH-HHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 2223333 2323333322 2345555678888999999999999999999999999999999999999999998888877
Q ss_pred HHHHHhcCCCCCC
Q 011657 446 VLSLAFIFXXXXX 458 (480)
Q Consensus 446 ~~~~~~~~~~~~~ 458 (480)
++..+..+++.++
T Consensus 183 ~~~~~~~~~~~~~ 195 (408)
T PRK09874 183 FLCFLVTLFCIRE 195 (408)
T ss_pred HHHHHHHHHHhcc
Confidence 7666555444444
No 158
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.39 E-value=7.5e-12 Score=122.95 Aligned_cols=163 Identities=12% Similarity=0.019 Sum_probs=123.4
Q ss_pred HHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHH
Q 011657 278 GAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLL 357 (480)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 357 (480)
...+..+.............|.+.++.|. +..+.++..+...++..++.++.|++.||+|||+.+..+.++.+++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 102 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTEVQGEFGL-TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC 102 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33333333333444566677888888888 88899999999999999999999999999999999998888888777766
Q ss_pred HHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHH
Q 011657 358 GSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGIL 437 (480)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~ 437 (480)
... .+...+....++.+.......+....++.|.+|+++|+.+.++.+....+|..+++.+.+.+.+..+|++.
T Consensus 103 ~~~------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 176 (496)
T PRK03893 103 GFA------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRAL 176 (496)
T ss_pred HHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 542 23333333333444433344455567889999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHH
Q 011657 438 FYAFGVIAVL 447 (480)
Q Consensus 438 ~~~~~~~~~~ 447 (480)
|++.+...++
T Consensus 177 f~~~~~~~~~ 186 (496)
T PRK03893 177 FFIGILPIIF 186 (496)
T ss_pred HHHHHHHHHH
Confidence 8765443333
No 159
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.39 E-value=9.3e-12 Score=118.52 Aligned_cols=149 Identities=9% Similarity=-0.032 Sum_probs=105.3
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
....+.+.+.++.|. +..+.++..+...++..++.++.|++.||+|||+++..+..+..++.+++... .. ...++..
T Consensus 31 ~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 107 (402)
T TIGR00897 31 LEQGWLSPFLKALGL-SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF-GL-GHANYPL 107 (402)
T ss_pred hHHHhHHHHHHHhCC-CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-hc-cCccHHH
Confidence 344466667788888 88999999999999999999999999999999999998888877765543221 11 1122333
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHH-HhHhhcchhhHHhhCccHHHHHHHH
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGAN-ALVTFAFSPLKDLLGAGILFYAFGV 443 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~-~i~~~~~~~~~~~~g~~~~~~~~~~ 443 (480)
+.....+.+.......+.....+.+.+|+++|++++|+.++...+|. .++|.+.+.+.+..|++..++....
T Consensus 108 l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 108 ILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 22222222222222223333567788899999999999999999886 5788888888888886555454433
No 160
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.38 E-value=1e-11 Score=116.93 Aligned_cols=155 Identities=18% Similarity=0.166 Sum_probs=112.2
Q ss_pred ChhHHHHhHHH-HHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCc
Q 011657 289 GQPSVLYYAAS-ILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV 367 (480)
Q Consensus 289 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (480)
.......+.|. +.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+++... ..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~-----~~ 89 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGL-STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA-----VQ 89 (366)
T ss_pred HHHHhHHhhhHHHHHHhCC-CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----hh
Confidence 33456667775 6678888 89999999999999999999999999999999999999988888887776542 20
Q ss_pred hhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh----------hCccHH
Q 011657 368 PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL----------LGAGIL 437 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~----------~g~~~~ 437 (480)
+...+....++.+...... +....++.|.+|+++|+.+.++.....++|..+++.+.+.+... .+|++.
T Consensus 90 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~ 168 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWA 168 (366)
T ss_pred hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 3333333333333333333 33457889999999999999999988888888888777766653 378888
Q ss_pred H-HHHHHHHHHHHH
Q 011657 438 F-YAFGVIAVLSLA 450 (480)
Q Consensus 438 ~-~~~~~~~~~~~~ 450 (480)
+ +..+.+..+..+
T Consensus 169 ~~~~~~~~~~~~~~ 182 (366)
T TIGR00886 169 FVIVPAGILLLPAL 182 (366)
T ss_pred hHHHHHHHHHHHHH
Confidence 7 433444433333
No 161
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.38 E-value=8.5e-12 Score=120.74 Aligned_cols=153 Identities=13% Similarity=0.113 Sum_probs=113.4
Q ss_pred hHHHHhHHHH-HHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh-hcCchHHHhhhHHHHHHHHHHHHHhhccCCch
Q 011657 291 PSVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVP 368 (480)
Q Consensus 291 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (480)
+....+++.| .++.|. +..++.+..........+..+++|+++|| +|||+++..+.++..++.+.+.+. ...
T Consensus 31 y~~~~~l~~yl~~~lg~-~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~-----~~~ 104 (489)
T PRK10207 31 YGVQGILAVFFVKQLGF-SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS-----LLK 104 (489)
T ss_pred HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh-----ccc
Confidence 3444444444 456777 77888888888888888888899999999 999999999999999888777642 121
Q ss_pred hHHHHHHHHHHHHHhcccccccceeecccCChh--hhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHH
Q 011657 369 AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLR--LRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAV 446 (480)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 446 (480)
...+.......+.......|...+++.|.+|++ +|+.+.++.+...++|..++|.+.|++.++.||++.|++.++..+
T Consensus 105 ~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 105 PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 222222233334444445566678999999877 457789999999999999999999999999999999988655444
Q ss_pred HHH
Q 011657 447 LSL 449 (480)
Q Consensus 447 ~~~ 449 (480)
++.
T Consensus 185 ~~~ 187 (489)
T PRK10207 185 IAL 187 (489)
T ss_pred HHH
Confidence 333
No 162
>PRK11043 putative transporter; Provisional
Probab=99.38 E-value=1e-11 Score=118.38 Aligned_cols=155 Identities=17% Similarity=0.082 Sum_probs=116.0
Q ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHH
Q 011657 296 YAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVAL 375 (480)
Q Consensus 296 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (480)
..|.+.++.+. ++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++... ..+.+..++..
T Consensus 28 ~~~~i~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~ 101 (401)
T PRK11043 28 AFKAIQADLQT-SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW-----VESAAQLLVLR 101 (401)
T ss_pred hHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH-----hcCHHHHHHHH
Confidence 34556678888 8899999999999999999999999999999999999888777776665543 12333333222
Q ss_pred HHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCC
Q 011657 376 LLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
.+. +.......+...+++.|.+|++.++...+..+....++..++|.+.+.+.+..||+..+++.+++.++..+..+..
T Consensus 102 ~l~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 102 FVQ-AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHH-HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 222 2222222233446778999989899999999988999999999999999999999999988887777666555443
Q ss_pred CC
Q 011657 456 XX 457 (480)
Q Consensus 456 ~~ 457 (480)
.+
T Consensus 181 ~~ 182 (401)
T PRK11043 181 KP 182 (401)
T ss_pred CC
Confidence 33
No 163
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.37 E-value=3e-11 Score=113.86 Aligned_cols=175 Identities=11% Similarity=0.075 Sum_probs=116.2
Q ss_pred HHHHHHhhChhHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHH
Q 011657 281 LVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGS 359 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 359 (480)
+.+...+..........+.+.+ +.++ +..+.++..++..+...+.++..|++.||+|.|+++.++..+..+..+.+.+
T Consensus 41 ~~f~~~F~~w~~~~~l~~~~~~~~~~l-s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~ 119 (462)
T PRK15034 41 SCLLLAFCVWMLFSAVTVNLNKIGFNF-TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGI 119 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444555555544 6888 8899999999999999999999999999999999999988888777776654
Q ss_pred HhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH-----Hh---
Q 011657 360 YYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK-----DL--- 431 (480)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~--- 431 (480)
.... ..+++..+....++.+..+..+ +.....+++.+|+++||++.|+....+++|..+++.+.+.+. +.
T Consensus 120 a~~~-~~~s~~~lli~r~l~Gigg~~f-~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~ 197 (462)
T PRK15034 120 AVQN-PNTPFGIFIVIALLCGFAGANF-ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGV 197 (462)
T ss_pred HHcc-cCCCHHHHHHHHHHHHHHHHhH-HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2111 1123333333333333333333 455578899999999999999998777777776666555433 22
Q ss_pred ----------hCccHHHHHHHHHHHHHHHhcCCCCCC
Q 011657 432 ----------LGAGILFYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 432 ----------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (480)
.+++.+.++...+.++..++.++..++
T Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 198 NGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 234555566666666666555554444
No 164
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.36 E-value=4.4e-12 Score=123.13 Aligned_cols=179 Identities=13% Similarity=0.017 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHH
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISL 354 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 354 (480)
.+....+.++..+..-..+....|.+.++.|. +..+.++..+...++..++.++.|+++||+|+|+++..+.++.++..
T Consensus 30 i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 108 (467)
T PRK09556 30 SYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL-STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICM 108 (467)
T ss_pred HHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHH
Confidence 33333343333333333445567888889999 88999999999999999999999999999999999988887777766
Q ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh--
Q 011657 355 FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-- 432 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-- 432 (480)
++++...... ..+...+....+..+.......|....++.|.+|+++|++++|+.+....+|.++++.+...+.+..
T Consensus 109 ~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~ 187 (467)
T PRK09556 109 LGFGASLGSG-SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD 187 (467)
T ss_pred HHHHHHHhcc-cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc
Confidence 6655422211 2333333333334444433444666689999999999999999999999999999998877666643
Q ss_pred -CccHHHHHHHHHHHHHHHhcCCC
Q 011657 433 -GAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 433 -g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
+|+..|.+.+++.++..++.+++
T Consensus 188 ~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 188 GHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHh
Confidence 46777777666665554444433
No 165
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.35 E-value=2.6e-12 Score=121.51 Aligned_cols=159 Identities=13% Similarity=0.049 Sum_probs=119.1
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
+....+.|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+++..+..+.+++.++.... .+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~ 93 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGV-GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA-----DSLAA 93 (377)
T ss_pred hhhhhHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH-----HHHHH
Confidence 3556678888889999 89999999999999999999999999999999999999988888887766542 22333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.++... +.+.......+.......+.+| ++|+.+.++......+|..+++.+.+.+.+..||++.|++.+++.++..+
T Consensus 94 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 94 LYLTYG-LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHH-HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 333333 3222222222333356677777 67999999999998899888887888888888999999988887777665
Q ss_pred hcCCCCC
Q 011657 451 FIFXXXX 457 (480)
Q Consensus 451 ~~~~~~~ 457 (480)
..+++.+
T Consensus 172 ~~~~~~~ 178 (377)
T TIGR00890 172 LGAFLIG 178 (377)
T ss_pred HHHHhee
Confidence 5544443
No 166
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.34 E-value=3e-11 Score=115.15 Aligned_cols=161 Identities=20% Similarity=0.055 Sum_probs=115.2
Q ss_pred hhHHHHhHHHH-HHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCC--
Q 011657 290 QPSVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDD-- 366 (480)
Q Consensus 290 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 366 (480)
........|.+ .++.|. +..+.++..+...++..++.++.|+++||+|||+++..+.++.+++.+.+.........
T Consensus 31 ~~~~~~~l~~~i~~~~g~-s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (399)
T PRK05122 31 IGLPLAVLPGYVHDQLGF-SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPV 109 (399)
T ss_pred HHHHHHHHHHHHHHhcCc-cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccch
Confidence 34455566654 456787 88999999999999999999999999999999999999888776665544332111110
Q ss_pred chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHH
Q 011657 367 VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAV 446 (480)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 446 (480)
.....++...++.+.......+....+..|..|+++|+++.++......+|..+++.+.+.+.+..||+..+++.+++.+
T Consensus 110 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 110 LSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred hHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 11222233333333333334455556778999999999999999888899999999999999999999887777666555
Q ss_pred HHHHh
Q 011657 447 LSLAF 451 (480)
Q Consensus 447 ~~~~~ 451 (480)
+..+.
T Consensus 190 ~~~~~ 194 (399)
T PRK05122 190 LGLLL 194 (399)
T ss_pred HHHHH
Confidence 44433
No 167
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.34 E-value=4.6e-12 Score=123.20 Aligned_cols=151 Identities=13% Similarity=-0.001 Sum_probs=117.6
Q ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHH
Q 011657 303 SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCY 382 (480)
Q Consensus 303 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (480)
+.+. +..+.+...+...++..++.++.|++.||+|+|+.+..+.++..++.++..... ......++..-++.+..
T Consensus 70 ~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKW-SGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA----GGGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCC-CHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH----HcCchHHHHHHHHHHHh
Confidence 4456 777889999999999999999999999999999999888877776665543211 12233344444455555
Q ss_pred hcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-CccHHHHHHHHHHHHHHHhcCCCCCC
Q 011657 383 QLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-GAGILFYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 383 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (480)
.....|....++.|.+|+++|+++.|+.+....+|.++++.+.+.+.+.. ||+..|++.+++.++..++.+.+.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 55566777789999999999999999999999999999999999999884 99999999888776665555444433
No 168
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.32 E-value=2.7e-11 Score=117.98 Aligned_cols=154 Identities=12% Similarity=0.043 Sum_probs=107.7
Q ss_pred hhHHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh-hcCchHHHhhhHHHHHHHHHHHHHhhccCCc
Q 011657 290 QPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLFLDDV 367 (480)
Q Consensus 290 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (480)
++....+.+.++ ++.|. +..+++..............+++|+++|| +|||+.+..+..+..++..++.+. .+
T Consensus 37 ~y~~~~~l~~yl~~~lg~-s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~-----~~ 110 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGM-SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS-----GH 110 (500)
T ss_pred HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh-----cc
Confidence 344555666665 66777 77777777766665656666789999999 599999999988888877666531 12
Q ss_pred hhHHHHHHHHHHHHHhcccccccceeecccCChhh--hhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHH
Q 011657 368 PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRL--RGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIA 445 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 445 (480)
....+.......+.......+...++..|.+|++. +..+.++.++..++|..++|.+.+++.+..||++.|.+.++..
T Consensus 111 ~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 111 DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 22222222222233333344565578899997543 4567888899999999999999999999999999998877554
Q ss_pred HHHH
Q 011657 446 VLSL 449 (480)
Q Consensus 446 ~~~~ 449 (480)
+++.
T Consensus 191 ~i~~ 194 (500)
T PRK09584 191 LITV 194 (500)
T ss_pred HHHH
Confidence 4443
No 169
>PRK12382 putative transporter; Provisional
Probab=99.31 E-value=3.9e-11 Score=114.02 Aligned_cols=155 Identities=14% Similarity=0.019 Sum_probs=108.8
Q ss_pred HHHHhHHHH-HHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC--Cch
Q 011657 292 SVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD--DVP 368 (480)
Q Consensus 292 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 368 (480)
...-..|.+ .++.|. +..+.++..+...++..++.++.|+++||+|||+++..+.+...++.+.......... ..+
T Consensus 33 ~~~p~l~~~l~~~lg~-s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (392)
T PRK12382 33 LPLPVIPLFVHHDLGF-GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFK 111 (392)
T ss_pred HHhhhhhHHHHHhcCC-cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHH
Confidence 333445544 467788 8999999999999999999999999999999999998887766655443222111111 122
Q ss_pred hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHH
Q 011657 369 AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVL 447 (480)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 447 (480)
...+....++.+.......+...+++.|.+|+++|++++++......++..++|.+.+.+.+..||+..+.+...+.++
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 190 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLL 190 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 2333333333333333333444467789999999999999999989999999999999998988988766554444333
No 170
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.31 E-value=3.6e-11 Score=114.01 Aligned_cols=151 Identities=13% Similarity=-0.020 Sum_probs=117.2
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
.......|.+.++.+. +..+.++..+...++..++.++.|++.||+|||+++..+..+.+++.+...+ .++.+.
T Consensus 26 ~~~~~~lp~i~~~~~~-s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~-----a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGM-SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL-----YPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH-----CcchHH
Confidence 3455678888889999 8899999999999999999999999999999999999999999999988775 233333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-CccHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-GAGILFYAFGVIAVLSL 449 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 449 (480)
+....++.+.......+....++.+.+| ++|+.++++.......|..+++.+.+.+.++. +|+..+.+.++..++..
T Consensus 100 -ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 100 -LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred -HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3333334333333344455577788887 77999999999999999999999998888875 78877766555544433
No 171
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=6.5e-11 Score=112.12 Aligned_cols=154 Identities=13% Similarity=0.115 Sum_probs=113.7
Q ss_pred HHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHH
Q 011657 294 LYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVV 373 (480)
Q Consensus 294 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (480)
....+.+.++.+. +..+.++......+...+..++.|+++||+|||+++..+..+.+++.+++... .+. +
T Consensus 23 ~~~~~~~~~~~~~-s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-----~~~---~- 92 (393)
T PRK11195 23 LFAAIALLKELHY-PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-----IHP---L- 92 (393)
T ss_pred HHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-----HHH---H-
Confidence 3444455677777 77788999999999999999999999999999999999988887766654331 111 2
Q ss_pred HHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcC
Q 011657 374 ALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 453 (480)
...++.+.......|...+++.|.+|+++|++++|+.+....++..+||.+.|.+.+.. +...+.+.+.+.+++.+..
T Consensus 93 ~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~~~- 170 (393)
T PRK11195 93 LAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAALFN- 170 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-
Confidence 22233444455566787899999999999999999999999999999999999998854 5555555554444443333
Q ss_pred CCCCCC
Q 011657 454 XXXXXX 459 (480)
Q Consensus 454 ~~~~~~ 459 (480)
+..||.
T Consensus 171 ~~l~~~ 176 (393)
T PRK11195 171 LFIPRL 176 (393)
T ss_pred hcCCCC
Confidence 334443
No 172
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.29 E-value=4.5e-11 Score=107.54 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=131.2
Q ss_pred HhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC
Q 011657 286 QITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD 365 (480)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (480)
.++.+..+....+.+-++.++ |+.|.+++..+..+.+.+.+++-|.+.||+|.|++...+.++..+-++.+.+...
T Consensus 26 ~F~VW~l~s~l~~~i~~~~~L-S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~--- 101 (417)
T COG2223 26 GFMVWTLFSPLGVFIKSDFGL-SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVT--- 101 (417)
T ss_pred HHHHHHHHHHHHhhhccccCC-CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHcc---
Confidence 333444556666777788899 9999999999999999999999999999999999999999988888877765422
Q ss_pred CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC---ccHHHHHHH
Q 011657 366 DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG---AGILFYAFG 442 (480)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g---~~~~~~~~~ 442 (480)
..+++.++.+.++.+..+..+ .....++++.+|++++|.++|++. .+|+|..+...+.+.+....| |+.+..+..
T Consensus 102 ~~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~ 179 (417)
T COG2223 102 YPSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYV 179 (417)
T ss_pred CCchHHHHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 222234444444444444444 455589999999999999999999 999999999999999999988 888888888
Q ss_pred HHHHHHHHhcCCCCCC
Q 011657 443 VIAVLSLAFIFXXXXX 458 (480)
Q Consensus 443 ~~~~~~~~~~~~~~~~ 458 (480)
...++..+..++..++
T Consensus 180 ~~l~v~~v~~~~~~~d 195 (417)
T COG2223 180 VALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 8777777776665543
No 173
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.29 E-value=8.2e-11 Score=115.08 Aligned_cols=154 Identities=17% Similarity=0.040 Sum_probs=110.3
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhc------cCCchhHHHHHHHHH
Q 011657 305 GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLF------LDDVPAVAVVALLLY 378 (480)
Q Consensus 305 g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 378 (480)
+. +..+.++..+...++..++.++.|+++||+|||+++..+..+..++.++....... ........++..-++
T Consensus 51 ~~-~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SA-ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 55 67788999999999999999999999999999999999888877776655431000 011112233334344
Q ss_pred HHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH--------HhhCccHHHHHHHHHHHHHHH
Q 011657 379 VGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK--------DLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+.......+...+++.|.+|+++|+.++++.+....+|..+++.+.+.+. +..||++.|++.++..++..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM 209 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH
Confidence 445445555667789999999999999999999988888888766543332 356899999887776666655
Q ss_pred hcCCCCCCCC
Q 011657 451 FIFXXXXXXX 460 (480)
Q Consensus 451 ~~~~~~~~~~ 460 (480)
..+ +.||+.
T Consensus 210 ~~~-~l~~s~ 218 (479)
T PRK10077 210 LLY-FVPETP 218 (479)
T ss_pred HHH-cCCCCc
Confidence 443 456653
No 174
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.29 E-value=4.5e-11 Score=111.76 Aligned_cols=157 Identities=21% Similarity=0.184 Sum_probs=125.8
Q ss_pred ChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCch
Q 011657 289 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVP 368 (480)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (480)
.........|.+.++.+. +..+.+.......++..++.++.|+++||+|||+.+..+..+..++.+.+... .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~------~~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGL-SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA------SS 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh------cc
Confidence 344566677888888888 88999999999999999999999999999999999999888888888776542 23
Q ss_pred hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHH
Q 011657 369 AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLS 448 (480)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 448 (480)
...+....+..+.......+...++..|.+|+++|++..++.+....+|..++|.+.+.+.+..+|+..+++.+.+.++.
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLL 166 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333334444444444456666899999999999999999999999999999999999999888988888877766665
Q ss_pred HHhc
Q 011657 449 LAFI 452 (480)
Q Consensus 449 ~~~~ 452 (480)
.+..
T Consensus 167 ~~~~ 170 (352)
T cd06174 167 ALLL 170 (352)
T ss_pred HHHH
Confidence 5443
No 175
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.29 E-value=8e-10 Score=98.30 Aligned_cols=74 Identities=24% Similarity=0.460 Sum_probs=70.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 163 (480)
+|.+..|++.+....+....+..++.|.++||+|||+.-++.+++.+++++ +-.+++++.++++|++.|++...
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSL 137 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999986 55679999999999999999998
No 176
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.28 E-value=7.3e-11 Score=114.03 Aligned_cols=186 Identities=14% Similarity=0.091 Sum_probs=138.3
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHH
Q 011657 265 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL 344 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 344 (480)
..+|++.++.+++...+..+.......... .+..+... ++...+++.....+..++..+++|.++||++||++++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~----wlv~~lt~-S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALA----WLVTQLTG-SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 346778888887777666665543333333 23334444 7888999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhc
Q 011657 345 GGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFA 424 (480)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 424 (480)
.+-++.++....+.+...... .+.+.++.+.+..+.......|...+++.|++|+++...++++.....++...+||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~-~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGL-LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 888777666555554333322 3334444445555555556678888999999999999999999999999999999999
Q ss_pred chhhHHhhCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 425 FSPLKDLLGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 425 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
.|.++...|...+|.+.++..++..+......
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999988888888776666555544433
No 177
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.28 E-value=2.9e-11 Score=118.32 Aligned_cols=147 Identities=20% Similarity=0.037 Sum_probs=109.4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhccccc
Q 011657 309 ASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGP 388 (480)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (480)
..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++..... .......++...++.+.......+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~ 146 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAA---FALSVEMLIVGRVLLGIGVGIASA 146 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhc---cccchHHHHHHHHHHHhhhhHHHh
Confidence 78899999999999999999999999999999999988888877776664321 122222333333333333333445
Q ss_pred ccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc---hhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 389 IGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF---SPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
....++.|.+|+++|+.+.++.+....+|..+++.+. +...+..+|++.|++.+...++..+..+ +.+|+
T Consensus 147 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~-~l~~~ 219 (481)
T TIGR00879 147 LVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLF-FLPES 219 (481)
T ss_pred HHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 6668999999999999999999999999999999988 6666778899998886665555544433 34554
No 178
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=5.4e-11 Score=112.42 Aligned_cols=161 Identities=11% Similarity=-0.016 Sum_probs=110.7
Q ss_pred HHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHh-hhHHHHHHHHHHHHHhhccCCchh
Q 011657 292 SVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLG-GVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 292 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
......|.++ ++.|. +..+.++..+...+...+..++.|+++||+|||+.+.. +..+..++.++... .+ ++
T Consensus 15 ~~~~~l~~~l~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~-~~ 87 (375)
T TIGR00899 15 LQFPTLSLFLSEEVRA-RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-----NR-NY 87 (375)
T ss_pred HHhhHHHHHHHcccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh-----cc-hH
Confidence 4444555544 56788 88999999999999999999999999999999887654 44444444444332 22 23
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCChhhhhhH--HHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRG--LSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVL 447 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 447 (480)
+.+.......+.......|...++..|..|++.|+.+ .+.......+|..++|.+.+.+.+..||+..|++.+.+.++
T Consensus 88 ~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~ 167 (375)
T TIGR00899 88 FLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVL 167 (375)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHH
Confidence 3332222222333333445555677777776666644 57777788899999999999999999999999998887777
Q ss_pred HHHhcCCCCCCC
Q 011657 448 SLAFIFXXXXXX 459 (480)
Q Consensus 448 ~~~~~~~~~~~~ 459 (480)
..++.++..||.
T Consensus 168 ~~~~~~~~~~~~ 179 (375)
T TIGR00899 168 CGVLVWLFLPSY 179 (375)
T ss_pred HHHHHHHhCCCc
Confidence 666655545553
No 179
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.28 E-value=1.3e-10 Score=109.92 Aligned_cols=138 Identities=17% Similarity=-0.051 Sum_probs=106.6
Q ss_pred hChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCc
Q 011657 288 TGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV 367 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (480)
........+.|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+..+..++...... .++
T Consensus 20 ~~~~~~~~~lp~~~~~~~~-s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~-----~~~ 93 (381)
T PRK03633 20 LAIAVLNTLVPLWLAQEHL-PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL-----MVG 93 (381)
T ss_pred HhhhhHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcc
Confidence 3445667788999999998 8899999999999999999999999999999999999988888877776553 223
Q ss_pred hhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 368 PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
.+..+ ...+..+.......+.......+..++++|+++.+..+....+|..+++.+.+.+.+..
T Consensus 94 ~~~l~-~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 94 FWSWL-AWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 33333 33333333333333444455667788899999999999999999999999998887653
No 180
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.27 E-value=1.1e-10 Score=111.00 Aligned_cols=158 Identities=15% Similarity=0.015 Sum_probs=117.4
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
.......|.+.++.+. +..+.++..+...++..++.+..|++.||+|||+.+..+..+.+++..++.... ...++.
T Consensus 20 ~~~~~l~~~~~~~~~~-s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~---~~~~~~ 95 (410)
T TIGR00885 20 DITNPMVPQFQQAFTL-TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA---EIMNYT 95 (410)
T ss_pred HhHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH---hhccHH
Confidence 3445677888888898 889999999999999999999999999999999999999999888877653211 122333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH--------------------
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-------------------- 430 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-------------------- 430 (480)
.+....+..+.......+....++.+..|++++++..++.+.+..+|..++|.+.+.+..
T Consensus 96 ~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 175 (410)
T TIGR00885 96 LFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELS 175 (410)
T ss_pred HHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHH
Confidence 333333333333333334444677888899999999999999999999999998887742
Q ss_pred ------hhCccHHHHHHHHHHHHHHHhc
Q 011657 431 ------LLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 431 ------~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
..+|+.+|++.+++.++..++.
T Consensus 176 ~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 176 AIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357888888877666554443
No 181
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.27 E-value=2.1e-10 Score=112.10 Aligned_cols=172 Identities=14% Similarity=-0.022 Sum_probs=112.6
Q ss_pred HHHHHHhhChhHHHHhHHHHHHhcCCCCCcc-hHH-----HHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHH
Q 011657 281 LVLFQQITGQPSVLYYAASILQSAGFSAASD-ATR-----VSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISL 354 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~-----~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 354 (480)
+..+.....+..+.+..|.+-++.+. +..+ ... ..+...++..++.++.|+++||+|||+++..+.++.+++.
T Consensus 23 ~g~~~~~~d~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~ 101 (490)
T PRK10642 23 LGNAMEWFDFGVYGFVAYALGKVFFP-GADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSIST 101 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 33333333444555666666555543 2211 122 1355667888999999999999999999999999999888
Q ss_pred HHHHHHhhccCCchhH-------HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchh
Q 011657 355 FLLGSYYLFLDDVPAV-------AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSP 427 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~ 427 (480)
++.++. .+... .++..-++.+....+..+...+++.|.+|+++|+...++......+|..+++.+...
T Consensus 102 ~~~a~~-----~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 102 FCIGLI-----PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHhc-----ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877652 12111 133333444444444556666899999999999999999888777777777755443
Q ss_pred hH--------HhhCccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 428 LK--------DLLGAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 428 ~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
+. ...||++.|++.+.+.+++.++ ....+|+
T Consensus 177 ~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~-~~~~~es 215 (490)
T PRK10642 177 ISTIVGEANFLDWGWRIPFFIALPLGIIGLYL-RHALEET 215 (490)
T ss_pred HHHhcCHHHhcCccHHHHHHHHHHHHHHHHHH-HHcCCCC
Confidence 32 2578999998876655544433 3345664
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.27 E-value=2.1e-10 Score=112.54 Aligned_cols=151 Identities=14% Similarity=-0.011 Sum_probs=106.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFG 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
+..+.++......++.+++.++.|++.||+|||+.+..+.++..++.++...............+...-++.+.......
T Consensus 54 ~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 54 PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 34466788999999999999999999999999999998888888777665542100000012333333334444444445
Q ss_pred cccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-----------------------hhCccHHHHHHHHH
Q 011657 388 PIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-----------------------LLGAGILFYAFGVI 444 (480)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-----------------------~~g~~~~~~~~~~~ 444 (480)
+....++.|.+|++.|+++.++.+....+|..+++.+...+.. ..+|+..+.+.++.
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip 213 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVP 213 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHH
Confidence 6666999999999999999999999999998888877655432 13688888666655
Q ss_pred HHHHHHhcCCCCCCC
Q 011657 445 AVLSLAFIFXXXXXX 459 (480)
Q Consensus 445 ~~~~~~~~~~~~~~~ 459 (480)
.++..+.. +..||+
T Consensus 214 ~~i~~~~~-~~lpES 227 (502)
T TIGR00887 214 ALLALYFR-LTIPET 227 (502)
T ss_pred HHHHHHHH-HhCCCC
Confidence 55544443 446775
No 183
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.26 E-value=1.8e-11 Score=97.85 Aligned_cols=136 Identities=21% Similarity=0.221 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecc
Q 011657 317 ILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISE 396 (480)
Q Consensus 317 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+...++.+++.++.+++.||+|||+.+..+.....++.+.+.. ..+.+.......+.+ .......+....+..|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-----SSNITVLIIARFLQG-FGAAFALVAGAALIAD 78 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHH-HHHHHHHHhHHHHHHH
Confidence 3456788889999999999999999998887777776665543 123333333333333 3333334566688999
Q ss_pred cCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCC
Q 011657 397 VFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 397 ~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (480)
.+|+++|+++.++.+....++..+++.+.+.+.+..+++..+++.+.+.++..+..++..+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999998898888888888777777666665544
No 184
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.24 E-value=4.3e-11 Score=119.24 Aligned_cols=177 Identities=14% Similarity=0.030 Sum_probs=129.6
Q ss_pred HHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHH
Q 011657 277 IGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 356 (480)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 356 (480)
+...+..+.............+.+-++++. +..+.+++.+...++..++.++.+++.||.+||+.+.++.++.+++.++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~l-ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKL-STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCC-CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 333334444443344555666777788888 8899999999999999999999999999999999999999999999888
Q ss_pred HHHHhhcc-------------------------C--------------------CchhHHHHHHHHHHHHHhcccccccc
Q 011657 357 LGSYYLFL-------------------------D--------------------DVPAVAVVALLLYVGCYQLSFGPIGW 391 (480)
Q Consensus 357 ~~~~~~~~-------------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
+++..... . ...+..+++.-++.+.......++..
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 76432100 0 00223333444555555555667778
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh----------------------CccHHHHHHHHHHHHHH
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL----------------------GAGILFYAFGVIAVLSL 449 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~----------------------g~~~~~~~~~~~~~~~~ 449 (480)
+++.|.+|++.|+...|+.+....+|..+++.+.+.+.+.. +|+..|++.+++.++..
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877542 14456777776666655
Q ss_pred HhcCC
Q 011657 450 AFIFX 454 (480)
Q Consensus 450 ~~~~~ 454 (480)
+..++
T Consensus 275 v~l~~ 279 (633)
T TIGR00805 275 IPFFF 279 (633)
T ss_pred HHHHh
Confidence 54444
No 185
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.24 E-value=2.9e-10 Score=109.34 Aligned_cols=172 Identities=15% Similarity=0.031 Sum_probs=112.0
Q ss_pred HHHHhhChhHHHHhHHHHHHhcCC--CCCcc---hHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHH
Q 011657 283 LFQQITGQPSVLYYAASILQSAGF--SAASD---ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLL 357 (480)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 357 (480)
..........+.+..|.+.++.+. .+..+ .+.......++..++.++.|+++||+|||+.+..+..+..++.++.
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 333444445666677777777642 12332 3334455566666999999999999999999999999988888776
Q ss_pred HHHhhccCCch------hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH--
Q 011657 358 GSYYLFLDDVP------AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK-- 429 (480)
Q Consensus 358 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~-- 429 (480)
++. ++.. ...+...-+..+....+..+...+++.|.+|+++|+.+.++.+.....|..+++.+...+.
T Consensus 111 ~~~----~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 186 (432)
T PRK10406 111 ACL----PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQT 186 (432)
T ss_pred hhc----CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 542 1111 1123333334444444455677799999999999999999888777777777665543332
Q ss_pred ------HhhCccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 430 ------DLLGAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 430 ------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
...||+..|++.++..++...+ ....+|.
T Consensus 187 ~~~~~~~~~gWr~~F~i~~~~~ll~~~~-~~~~~e~ 221 (432)
T PRK10406 187 LEDAELREWGWRIPFALGAVLAVVALWL-RRQLDET 221 (432)
T ss_pred CCHHHHhccchHHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 2578999998877766655433 2334444
No 186
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.23 E-value=2.6e-10 Score=107.75 Aligned_cols=284 Identities=15% Similarity=0.163 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH------------------
Q 011657 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL------------------ 163 (480)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~------------------ 163 (480)
...+...+.++..|.++||+|||..+.+..+...+..+...+.. +|.++ +.|+..+.
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 44678888999999999999999999999988888887777666 33322 32322222
Q ss_pred ------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHH-HHHHHhcccCchHHHHHhcccccCchhhhHHH
Q 011657 164 ------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRES 224 (480)
Q Consensus 164 ------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~ 224 (480)
+|+.+++.+.... +.-.+|++..+..++ ......++||+-..-.+ ++
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~-------------~~ 210 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEKER-------------SD 210 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCcccc-------------cc
Confidence 5666666665553 677788888888777 55566778887320000 00
Q ss_pred HHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHH-Hh
Q 011657 225 AISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QS 303 (480)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 303 (480)
...++...+..... .....++...+....+..+.......+..........-..+.++ ..
T Consensus 211 -----~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~ 271 (463)
T KOG2816|consen 211 -----ATLRELTPGSLDSS--------------HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK 271 (463)
T ss_pred -----ccccccCCCcccch--------------hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee
Confidence 00000000000000 00111111111111122222111111111100000000011122 23
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHH-HHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHH
Q 011657 304 AGFSAASDATRVSILLGLFKLIMTGLAV-LVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCY 382 (480)
Q Consensus 304 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (480)
.++ +..+.+.+.+...+...++.++.. .+...++.|+....|.....+.....++. ...|..+....+ . ..
T Consensus 272 f~w-~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-----~~~w~~~~~~v~-~-~~ 343 (463)
T KOG2816|consen 272 FGW-NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-----TETWMMFAAGVV-V-AL 343 (463)
T ss_pred cCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-----ccchhhhHHHHH-H-Hh
Confidence 566 788888888888888888888776 77777888888888888888888877653 233333322222 2 22
Q ss_pred hcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 383 QLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 383 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
.....|...+..+...+++.+|++.++...+..+.+.++|.+.+.+...
T Consensus 344 ~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 344 AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 2233456667888888999999999999999999999999999887653
No 187
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.23 E-value=2.8e-10 Score=109.21 Aligned_cols=184 Identities=17% Similarity=0.136 Sum_probs=109.2
Q ss_pred HhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHH
Q 011657 266 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL 344 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 344 (480)
.++++.++...+..++..+. ......+.+.++++ .|. ++.+.++..+...++..++.++.|+++||+|||+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~-s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~ 80 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFI----WSSWFSFFPIWLHDINGL-SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLL 80 (420)
T ss_pred hhcCcchHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 34455555544433333332 22444555555555 788 8999999999999999999999999999999999987
Q ss_pred hhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhccc---ccccceeecccCChhhhhhHHHHHHHHHHHHHHhH
Q 011657 345 GGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSF---GPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALV 421 (480)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~ 421 (480)
.+..+.++....+...... ............+.....+..+ .+....+. +..+ +.++...|.......+|..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~g~~~g~~~~~~~~g~~i~ 157 (420)
T PRK09528 81 WIISGLLVLFGPFFIYVFA-PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVS-RRSGFEYGRARMWGSLGWALC 157 (420)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHHH-hhccccchhhHHhhhHHHHHH
Confidence 7655544333222110000 0000001111111111111111 11111221 2122 446677888888899999999
Q ss_pred hhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCC
Q 011657 422 TFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 422 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (480)
|.+.+.+.+ .+++..|++.++++++..++.+...++
T Consensus 158 ~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 158 AFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccccc
Confidence 999998877 478888888887777666665554444
No 188
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.21 E-value=2.2e-10 Score=110.42 Aligned_cols=149 Identities=18% Similarity=0.180 Sum_probs=107.0
Q ss_pred HHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHH
Q 011657 294 LYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVV 373 (480)
Q Consensus 294 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (480)
...++++..+.|. ..+..++.+...++..+..++.|+++|.+|||+.++.+.++..++.++.+. .++...++
T Consensus 64 a~~l~~I~~diG~--~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at------A~~~~~~i 135 (599)
T PF06609_consen 64 ASILPYINADIGG--SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT------AQNMNTFI 135 (599)
T ss_pred HHHHHHHHHhcCC--CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc------CCcHHHHH
Confidence 4445667777776 466778888899999999999999999999999999999999999988763 33333333
Q ss_pred -HHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 374 -ALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 374 -~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
...+.+.+.+ ...+....++|..|.+.|..+.++..........+++.+...+..+.+|++.|++..+...++++..
T Consensus 136 ag~~l~GvgaG--~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 136 AGMVLYGVGAG--VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HHHHHHHHhhH--HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 3333333322 2223445689999999998887777655555555666666666556789999998887766655443
No 189
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.21 E-value=5.1e-11 Score=105.77 Aligned_cols=150 Identities=14% Similarity=0.136 Sum_probs=128.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFG 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
...+.|+++....+.+++.+++.|.++||+|+|..+++|++++..+.+++++ .+.+..++..-...+..+....
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf------g~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF------GNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH------cchhHHHHHHHHHhhhhHHHHH
Confidence 5678999999999999999999999999999999999999999999998876 3455555555566666655555
Q ss_pred cccceeecccCChhh-hhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q 011657 388 PIGWLMISEVFPLRL-RGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSF 463 (480)
Q Consensus 388 ~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (480)
....+++++.+|.+. |++++|+.-.+..+|-.++|.+.|.+++..|+..+|++++.++++...+.++..+.++.++
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 666789999999875 6999999999999999999999999999999999999999999998888777665554443
No 190
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.20 E-value=7.4e-11 Score=112.26 Aligned_cols=337 Identities=18% Similarity=0.133 Sum_probs=176.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhcC----chHHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGI 159 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~ 159 (480)
+|+++++.....+...+...+ -+++|.++|-+. ||+-++++.++..++.+..+..+ +.....+.-++..+
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASF 98 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 999999999988888887765 677899999763 55556677777766666665533 45566666667777
Q ss_pred HHhH------------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhc-ccC
Q 011657 160 GIGL------------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPA 202 (480)
Q Consensus 160 g~g~------------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e 202 (480)
|... +|..+++.+.+.. ++|..|.+.+++.++..+..++ .+|
T Consensus 99 g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 99 GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 6666 3333444444444 7888888887777765444444 443
Q ss_pred chHHHHHhcccccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHH-HHHH
Q 011657 203 SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALII-GAGL 281 (480)
Q Consensus 203 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 281 (480)
.++. +. ++. ... .. ++.+... ...++.....++.++.+..+...+ ..++
T Consensus 178 ~~~~---~~-----------~~~-------~~~--~~---~~~~~~~----~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 227 (433)
T PF03092_consen 178 RKVR---PA-----------DEV-------FSF--GK---EEVPCLF----GSFREQLSELWRALQQRAIWQPILFFIFF 227 (433)
T ss_pred cccc---cc-----------chh-------hcc--cc---cccchhh----HHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 2100 00 000 000 00 0000000 000011122334444443333222 1111
Q ss_pred HHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHh
Q 011657 282 VLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYY 361 (480)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (480)
.............++........++ ++...+....+..++.+++..+......+..-|+++.+..++.++..+.-....
T Consensus 228 ~~~~~~~~~a~~fy~~~~~~~gp~f-s~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv 306 (433)
T PF03092_consen 228 FNLPPSISSASSFYFQTDALGGPHF-SPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLV 306 (433)
T ss_pred HHhccCCCCccEEEEEecccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEE
Confidence 1111110000011111111111124 555566666666677777776666655555656666555544433322211100
Q ss_pred hc-c----CCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCc--
Q 011657 362 LF-L----DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGA-- 434 (480)
Q Consensus 362 ~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~-- 434 (480)
.. + -.+.+..+.--.+........+.|.. .+++|+.|+..-|+..++..++.++|..++..+...+.+..+.
T Consensus 307 ~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~ 385 (433)
T PF03092_consen 307 TRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTR 385 (433)
T ss_pred EEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 00 0 01123233333444444555555665 6889999999999999999999999999999998888876652
Q ss_pred ------cHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 435 ------GILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 435 ------~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
....++..++.++...+..+ +|+.+
T Consensus 386 ~~f~~l~~lili~~~~~ll~l~ll~l-Lp~~~ 416 (433)
T PF03092_consen 386 DDFSNLWLLILICSVIQLLPLPLLFL-LPPQK 416 (433)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHH-cCCCc
Confidence 12334444445444444433 44433
No 191
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.19 E-value=1.2e-08 Score=92.46 Aligned_cols=341 Identities=17% Similarity=0.094 Sum_probs=188.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHH-HHHHHHHHHHHHHHhc-----C--------ch-H
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELI-LAALLYLVGALVTALA-----P--------DF-I 148 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~-~~~~~~~~~~~~~~~~-----~--------~~-~ 148 (480)
++++....+.+.++..+... ..+.+|+.+|+.+ ||..++ .|.++...+..+..++ . .+ +
T Consensus 10 L~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 88999999999988877665 5899999999999 887666 4666666665554442 2 22 2
Q ss_pred --HHHHHHHHHHHHHhHhHHhhhhhhhhhhh-hh-------HHHHhchhHHHHHHHHHHhcccCchHHHHHhcccccCch
Q 011657 149 --IMVVGRFVFGIGIGLGGYGIGSLLVDLVA-GW-------RYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDM 218 (480)
Q Consensus 149 --~l~~~r~l~G~g~g~~g~~~g~~l~~~~~-~w-------r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~ 218 (480)
...+.-.+.|+|.+..+...-.++.+... .. -|...+.+++.-......++-|-+|..+.+--
T Consensus 89 ~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~------- 161 (403)
T PF03209_consen 89 LALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI------- 161 (403)
T ss_pred HHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH-------
Confidence 22334556677777655555555554221 11 12222222222112222222233332211100
Q ss_pred hhhHHHHHHHHHH--HhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHh
Q 011657 219 QDLRESAISCLCR--LRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYY 296 (480)
Q Consensus 219 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480)
....-..-.+.- .-+.+....... ...++++......++++..++..++++...++..+..+ .....
T Consensus 162 -~~~a~i~~~l~~ia~wg~E~r~~~~~------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~----~QD~i 230 (403)
T PF03209_consen 162 -QGVALIALLLNLIALWGQEPRRSRRA------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFF----MQDVI 230 (403)
T ss_pred -HHHHHHHHHHHHHHHHhcccCCcccc------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHH----hhHHH
Confidence 000000000000 001110000000 00111122233456667777766666554444433221 11112
Q ss_pred H-HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh-hhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHH
Q 011657 297 A-ASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE-RLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVA 374 (480)
Q Consensus 297 ~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (480)
+ |+=-+-+|+ +..+...+....+.+.+++....+++.. |.++++...+++....+++.++..... ..+.+.....
T Consensus 231 LEPygg~Vfgm-sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~--~~~~~~~~~~ 307 (403)
T PF03209_consen 231 LEPYGGEVFGM-SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP--LGSPWLFRPG 307 (403)
T ss_pred cCCchhHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh--cccchHHHHH
Confidence 2 222344677 8999999999999999999999998776 677778877888888887777654322 3344444444
Q ss_pred HHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh----------hCccHHHHHHHHH
Q 011657 375 LLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL----------LGAGILFYAFGVI 444 (480)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~----------~g~~~~~~~~~~~ 444 (480)
.++++.+.+.. ..-..+...+..++++.|..+|.....+.+...++..+.|.+.|. .+|..+|.+=+++
T Consensus 308 ~~l~G~g~G~f-~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~l 386 (403)
T PF03209_consen 308 VFLLGLGNGLF-TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVL 386 (403)
T ss_pred HHHHHHhhhHH-HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Confidence 44444333332 223335677888888999999999999999999999888888773 1244455554555
Q ss_pred HHHHHHhc
Q 011657 445 AVLSLAFI 452 (480)
Q Consensus 445 ~~~~~~~~ 452 (480)
.+++..+.
T Consensus 387 l~~a~~ll 394 (403)
T PF03209_consen 387 LLAALVLL 394 (403)
T ss_pred HHHHHHHH
Confidence 55554443
No 192
>PRK15075 citrate-proton symporter; Provisional
Probab=99.19 E-value=6.2e-10 Score=107.15 Aligned_cols=162 Identities=16% Similarity=-0.012 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcch-HHHHHHH-----HHHHHHHHHHHHHHHhhhcCchHHHhhhHH
Q 011657 276 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDA-TRVSILL-----GLFKLIMTGLAVLVVERLGRRPLLLGGVSG 349 (480)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~-----~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 349 (480)
.....+..+........+....|.+.++.+. +..+. .+..+.. .+...++.++.|++.||+|||+.+..+..+
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFP-AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 3444445555555556778888999898887 44443 3332222 222346788999999999999999999988
Q ss_pred HHHHHHHHHHHhhccCCchhH-------HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 350 IVISLFLLGSYYLFLDDVPAV-------AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
..++.+++++. .+... .+...-++.+.......+....++.|.+|+++|+++.++.....+++..+++
T Consensus 96 ~~~~~~l~~~~-----~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 96 MASGTLLIAFV-----PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHhC-----CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 88887776642 22111 1222222333333333344457899999999999999999988877777766
Q ss_pred hcchhh--------HHhhCccHHHHHHHH
Q 011657 423 FAFSPL--------KDLLGAGILFYAFGV 443 (480)
Q Consensus 423 ~~~~~~--------~~~~g~~~~~~~~~~ 443 (480)
.+.+.+ .+..||+..|++...
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 665544 356789988887543
No 193
>PTZ00207 hypothetical protein; Provisional
Probab=99.17 E-value=3.5e-10 Score=109.83 Aligned_cols=162 Identities=10% Similarity=0.059 Sum_probs=108.1
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
+.+..+.+.+.++.|. +..+.+........ .....++.|++.||+|+|+++.++.++..++.+++.+........+.+
T Consensus 44 y~fsv~s~~L~~~lgl-s~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 44 YAFNLISGAMQARYNL-TQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHHHHHhCc-CHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 4666778888888898 77888877765333 345666789999999999999999999999988776532111112333
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLA 450 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 450 (480)
.+.+..++.+.......+.....+.+.+| ++||.+.|+......+|+++.+.+...+.. .++...+++.+++.++..+
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Confidence 33333333333333233334456788887 779999999999999999876655555544 3566677777776665555
Q ss_pred hcCCCC
Q 011657 451 FIFXXX 456 (480)
Q Consensus 451 ~~~~~~ 456 (480)
+.+.+.
T Consensus 200 l~~~~v 205 (591)
T PTZ00207 200 LAIVFM 205 (591)
T ss_pred HHHhhe
Confidence 544433
No 194
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.17 E-value=1.4e-09 Score=100.96 Aligned_cols=137 Identities=12% Similarity=0.005 Sum_probs=111.3
Q ss_pred HHHHhHHHHHHhcCCCCCcc-hHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 292 SVLYYAASILQSAGFSAASD-ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
...+..|.+.++.|+ +..+ .+.+......+..+..+++|+++||+|.|+++..+.+...+..+++++. ....
T Consensus 44 n~s~a~p~L~~elgl-T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa------~Sl~ 116 (511)
T TIGR00806 44 GESFITPYLLTVLNF-TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG------TSVW 116 (511)
T ss_pred hHHHHHHHHHHHcCC-CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH------HHHH
Confidence 556677888889999 8888 9999999999999999999999999999999999988888887777652 2344
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGIL 437 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~ 437 (480)
.+.+.-++.+.+..... ....++...+|+++|+++.|+.+....+|.++++.+.+. ....||+..
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y 181 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISY 181 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhH
Confidence 44444444444444444 556899999999999999999999999999999999998 556787763
No 195
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.17 E-value=6.4e-10 Score=105.98 Aligned_cols=169 Identities=17% Similarity=0.073 Sum_probs=121.7
Q ss_pred HHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh-----cCch-HHHhhhHHHHHHHHHH
Q 011657 284 FQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-----GRRP-LLLGGVSGIVISLFLL 357 (480)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~-~~~~~~~~~~~~~~~~ 357 (480)
+.+.........-+|.++++.|. +..+.++....... .+..++.|+++||+ |||+ .+..+..+.+++...+
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~-~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGL-DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 33444555667788999999999 89999988666655 68889999999999 7765 6777777776666655
Q ss_pred HHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh-hCccH
Q 011657 358 GSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL-LGAGI 436 (480)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~g~~~ 436 (480)
.+. ......+.+....++.........+...+++.|.+|+++|+++.++......+|..+++.+.+.+.+. .||+.
T Consensus 86 ~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 86 AFC---PPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred Hhc---CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 432 11222333333323333444445566778999999999999999999999999999999998888885 59999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCC
Q 011657 437 LFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
.|++.+++.++..+... ..+|+
T Consensus 163 ~f~i~a~~~l~~~l~~~-~~~e~ 184 (402)
T PRK11902 163 TYLLMAGLMLAGALTTL-WAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCC
Confidence 99988887766555433 34443
No 196
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.17 E-value=8.5e-10 Score=104.75 Aligned_cols=160 Identities=10% Similarity=-0.089 Sum_probs=100.1
Q ss_pred HHHhHHHH-HHhcCCCCCcchHHHHHHHHH-HHHHHHHHHHHHHhhhcCchHHH-hhhHHHHHHHHHHHHHhhccCCchh
Q 011657 293 VLYYAASI-LQSAGFSAASDATRVSILLGL-FKLIMTGLAVLVVERLGRRPLLL-GGVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 293 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
+....+.+ .++.|. +..+.++..+...+ +...+.+.+++ .||+|||+.+. .+.+...++..++.. .++.+
T Consensus 34 ~~p~~~~~l~~~~~~-s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~ 106 (393)
T PRK15011 34 QTPTLSIFLTDEVHA-RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW-----NRNYF 106 (393)
T ss_pred HHHHHHHHHHhhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH-----hhHHH
Confidence 33444444 456787 88888888766555 44455555555 99999998754 444443344443332 12222
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCChhhh--hhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLR--GRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVL 447 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 447 (480)
..++...+..+ ......|....+..+..+++.| +...++.+....+|..++|.+.+.+.++.||+..|++.+.+.++
T Consensus 107 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~ 185 (393)
T PRK15011 107 VLLFVGVFLSS-FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIV 185 (393)
T ss_pred HHHHHHHHHHH-HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 22222222222 2334455555666666555444 23447778888999999999999999999999999988887777
Q ss_pred HHHhcCCCCCCCC
Q 011657 448 SLAFIFXXXXXXX 460 (480)
Q Consensus 448 ~~~~~~~~~~~~~ 460 (480)
..+..++..||.+
T Consensus 186 ~~~~~~~~~~~~~ 198 (393)
T PRK15011 186 CGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHhhcCccC
Confidence 6666555556543
No 197
>PRK09952 shikimate transporter; Provisional
Probab=99.15 E-value=1.7e-09 Score=104.08 Aligned_cols=168 Identities=17% Similarity=-0.014 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHH-hc--CCCCCcchHHHH-----HHHHHHHHHHHHHHHHHHhhhcCchHHHhh
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQ-SA--GFSAASDATRVS-----ILLGLFKLIMTGLAVLVVERLGRRPLLLGG 346 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--g~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 346 (480)
......+..+........+.+..+.+.. +. +. ++. .+... ....++..++.++.|+++||+|||+.+..+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~ 100 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQV-SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLT 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHH
Confidence 3333333444443333444445554433 32 34 443 33332 233455668888899999999999999999
Q ss_pred hHHHHHHHHHHHHHhhccCCchh------HHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHh
Q 011657 347 VSGIVISLFLLGSYYLFLDDVPA------VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANAL 420 (480)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i 420 (480)
..+.+++.++.++. ++... ..+...-++.+....+..+....++.|.+|+++|+...+..+....+|..+
T Consensus 101 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 101 VWMMGIATALIGLL----PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 88888887776642 11110 123333333444444444555689999999999999999988888888888
Q ss_pred HhhcchhhH--------HhhCccHHHHHHHHHHHHH
Q 011657 421 VTFAFSPLK--------DLLGAGILFYAFGVIAVLS 448 (480)
Q Consensus 421 ~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~ 448 (480)
++.+...+. ...||+..|++.++..++.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~ 212 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA 212 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH
Confidence 776665544 2478999998877665443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=5e-10 Score=104.96 Aligned_cols=162 Identities=14% Similarity=0.043 Sum_probs=112.7
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh-----cCchHH-HhhhHHHHHHHHHHHHHhhccC
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-----GRRPLL-LGGVSGIVISLFLLGSYYLFLD 365 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 365 (480)
......|.+.++.|. +..+.++.... .+...+ .++.|+++||+ |||+.+ +.+.++.+++...+.+. . +
T Consensus 6 ~~~~~~~~~~~~~g~-s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~--~-~ 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNV-SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL--V-P 79 (356)
T ss_pred hHHhHHHHHHHHcCC-CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC--C-c
Confidence 445567888899999 88888888654 444444 88999999998 888864 45555555554444321 1 1
Q ss_pred CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC--------ccHH
Q 011657 366 DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG--------AGIL 437 (480)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g--------~~~~ 437 (480)
....+.+....+..........+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..| |+..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 12222222222233333333445666889999999999999999999999999999999999888888 9999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC
Q 011657 438 FYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
|++.+++.++..+..++..+|.
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCC
Confidence 9888887777665555444554
No 199
>PRK10133 L-fucose transporter; Provisional
Probab=99.14 E-value=1.4e-09 Score=104.36 Aligned_cols=136 Identities=10% Similarity=-0.041 Sum_probs=100.6
Q ss_pred hhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh
Q 011657 290 QPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
......+.|.+.++.+. +..+.++..+...++..++.++.|++.||+|||+++..+..+..++.+++.... ...++
T Consensus 42 ~~~~~~~~p~i~~~~~~-s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~---~a~~~ 117 (438)
T PRK10133 42 NNLNDILLPQFQQAFTL-TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA---EIMNY 117 (438)
T ss_pred HHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH---hcCCH
Confidence 34666788888888898 889999999999999999999999999999999999999999888887653211 12333
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK 429 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~ 429 (480)
..+....+..+.......+....++.|..|++.++...++.+....+|..+++.+.+.+.
T Consensus 118 ~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 118 TLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333323333444567778777776767889999999999999998766543
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.13 E-value=8.9e-10 Score=119.22 Aligned_cols=188 Identities=15% Similarity=-0.011 Sum_probs=118.4
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH
Q 011657 264 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL 342 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 342 (480)
+++++++.++++++..++..+........+..+..+.+.. .+..+....++..+...+..++..+++|+++||+|||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 3466777777766655555444322222222222222221 111112346677778888899999999999999999997
Q ss_pred HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 343 LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
+.....+..+...+...... . .+.+.+++..++.+.....+.|...+++.+.+|++.++.++|+.++...+|.++||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~--~-~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp 161 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFH--L-NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGT 161 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHH--H-hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHH
Confidence 64322222111111111111 1 23444444555555555566788889999999999999999999999999999999
Q ss_pred hcchhhHHhhCccHHHHHHHHHHHHHHHhcCC
Q 011657 423 FAFSPLKDLLGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 423 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.+.|.+.+..+|+..|+..+.+.+++.++.++
T Consensus 162 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1140)
T PRK06814 162 IIGGLATISGNFVILVALLMGIAVLGWLASLF 193 (1140)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999888774444444444444333
No 201
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.12 E-value=2.1e-09 Score=102.26 Aligned_cols=184 Identities=15% Similarity=0.083 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh----hhcCchHHHhh-hH
Q 011657 274 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE----RLGRRPLLLGG-VS 348 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~-~~ 348 (480)
+++.........++. +.....+.+.++++.|. +....+.......+.+++..++.|+++| |+|||+.++.+ ..
T Consensus 5 ~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~-~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFG-WALQLSLLTPYVQELGI-PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 333444444444443 34556677778899999 8899999999999999999999999999 59999988764 44
Q ss_pred HHHHHHHHHHHHhhcc--------CCc-h---hHHHHHHHHHHHHHhcccccccceeecccCChhhh--hhHHHHHHHHH
Q 011657 349 GIVISLFLLGSYYLFL--------DDV-P---AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLR--GRGLSVAVLVN 414 (480)
Q Consensus 349 ~~~~~~~~~~~~~~~~--------~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~ 414 (480)
...+++.++....... ... . +..+..+.+..........|. -+++.|..|+++| +.+.++.+...
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~ 161 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFM 161 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHH
Confidence 4555555443311000 000 1 111222222223333333444 4899999998865 57899999999
Q ss_pred HHHHHhHhhcchhh--HHhh-------------CccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 415 FGANALVTFAFSPL--KDLL-------------GAGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 415 ~~g~~i~~~~~~~~--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
++|+.+++.+.+.. .+.. +.+..|++.+++.+++.++..+..+|..
T Consensus 162 ~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 162 AIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99999999887754 2211 4566888888888888888887777754
No 202
>TIGR00898 2A0119 cation transport protein.
Probab=99.11 E-value=2.1e-10 Score=112.88 Aligned_cols=153 Identities=14% Similarity=0.047 Sum_probs=115.8
Q ss_pred hHHHHHHhcCCCC---CcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 296 YAASILQSAGFSA---ASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 296 ~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
+.+.+.++.+. + ..+.++..+...++.+++.++.|+++||+|||+++..+.++..++.++..+ . .+...+
T Consensus 111 ~~~~i~~e~~l-~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-----~-~~~~~~ 183 (505)
T TIGR00898 111 FSSTIVTEWDL-VCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-----S-PNYTVF 183 (505)
T ss_pred ccccEEEEecc-eechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----c-ccHHHH
Confidence 44555667777 5 778899999999999999999999999999999999988888777766553 1 233444
Q ss_pred HHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
....++.+.......+...+++.|.+|+++|+.+.++......+|.++++.+...+.+ |++.+++.++..++..+..
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH
Confidence 4444444555555566777899999999999999999988888898888877655443 7888888877776666555
Q ss_pred CCCCCCC
Q 011657 453 FXXXXXX 459 (480)
Q Consensus 453 ~~~~~~~ 459 (480)
++.+|+
T Consensus 261 -~~~~es 266 (505)
T TIGR00898 261 -WFVPES 266 (505)
T ss_pred -HhcCCC
Confidence 345654
No 203
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.11 E-value=5.3e-10 Score=104.71 Aligned_cols=148 Identities=20% Similarity=0.156 Sum_probs=107.7
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
......|.+.++.|. +..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+.. . ..+.+..
T Consensus 18 ~~~~~lp~l~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~-----~~~~~~l 90 (355)
T TIGR00896 18 SVGPLLPQIRSALGM-SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S-----APGTALL 90 (355)
T ss_pred cCcccHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H-----hccHHHH
Confidence 445577888899999 89999999999999999999999999999999999988877766655543 1 2233333
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC--ccHHHHHHHHHHHHH
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG--AGILFYAFGVIAVLS 448 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g--~~~~~~~~~~~~~~~ 448 (480)
++..++.+.+.+. ..+.....+.|.+| ++|+++.++.+....+|..+++.+.+.+.+..+ |+..|.+.+++.++.
T Consensus 91 ~~~~~~~g~g~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 91 FAGTALIGVGIAI-INVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHH-HhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 3332222222222 22333456677776 679999999999999999999999888887653 676776666554443
No 204
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.11 E-value=2.1e-09 Score=104.73 Aligned_cols=164 Identities=16% Similarity=0.102 Sum_probs=114.0
Q ss_pred ChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh-----cCchH-HHhhhHHHHHHHHHHHHHhh
Q 011657 289 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-----GRRPL-LLGGVSGIVISLFLLGSYYL 362 (480)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~ 362 (480)
.........|.++++.|. +..+.+... ..... .++.++.++++||+ |||+. +..+.+..+++...++..
T Consensus 27 ~~~~~~~~l~~~l~~~g~-~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~-- 101 (491)
T PRK11010 27 PLALTSGTLQAWMTVENI-DLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL-- 101 (491)
T ss_pred HHHHHHHHHHHHHHhCCC-CHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc--
Confidence 334556677888888888 777777752 22222 26889999999999 98875 556666655555555432
Q ss_pred ccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-hhCccHHHHHH
Q 011657 363 FLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-LLGAGILFYAF 441 (480)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~g~~~~~~~~ 441 (480)
.+..+...+....+..+.......+...++..|.+|+++|+.+.++......+|..+++.+.+.+.+ ..||+..|++.
T Consensus 102 -~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~ 180 (491)
T PRK11010 102 -EPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLM 180 (491)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHH
Confidence 1222333333333333333334455666899999999999999999999999999999999999988 57999999998
Q ss_pred HHHHHHHHHhcCCCCCCC
Q 011657 442 GVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~ 459 (480)
+++.++..+..++ .+|+
T Consensus 181 a~l~ll~~l~~~~-~~e~ 197 (491)
T PRK11010 181 AALLIPCIIATLL-APEP 197 (491)
T ss_pred HHHHHHHHHHHHh-cCCC
Confidence 8877776555444 4554
No 205
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.10 E-value=1.4e-09 Score=103.53 Aligned_cols=164 Identities=17% Similarity=0.136 Sum_probs=102.4
Q ss_pred hHHHHhHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC--Cc
Q 011657 291 PSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD--DV 367 (480)
Q Consensus 291 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 367 (480)
..+..+.|.++. +.|. ++.+.++..+...++..++.++.|+++||+|||+.+..+....+++...+........ ..
T Consensus 19 ~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (396)
T TIGR00882 19 SAYFPFFPIWLHDVNGL-SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSN 97 (396)
T ss_pred HHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 344446666655 4688 8999999999999999999999999999999999988766555443332221111000 01
Q ss_pred hhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHH
Q 011657 368 PAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVL 447 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 447 (480)
.........++.+.......+....+..+..+ .++...|.......+|..++|.+.+.+.+ .+|+..|++.+.+.++
T Consensus 98 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~ 174 (396)
T TIGR00882 98 ILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALI 174 (396)
T ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHH
Confidence 11111111122222222223333344444322 23456677888889999999999887765 5899999888877776
Q ss_pred HHHhcCCCCCC
Q 011657 448 SLAFIFXXXXX 458 (480)
Q Consensus 448 ~~~~~~~~~~~ 458 (480)
..++.+...++
T Consensus 175 ~~~~~~~~~~~ 185 (396)
T TIGR00882 175 LMLLLMFAKPK 185 (396)
T ss_pred HHHHHHHhCCC
Confidence 66554443343
No 206
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.10 E-value=2.1e-10 Score=101.30 Aligned_cols=116 Identities=20% Similarity=0.194 Sum_probs=96.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFG 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
+...+|++.+.+.+..++.++..|.++||+|||.++.++.+..++...+.+. +.+...++..-+..+.+.....
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~------S~~F~afv~aR~l~Gi~kgnl~ 139 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL------SRNFAAFVLARFLGGIFKGNLS 139 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhhhccCchH
Confidence 4556899999999999999999999999999999999999888887777654 3344334443455555555554
Q ss_pred cccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH
Q 011657 388 PIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~ 430 (480)
+..++++|++++++|+.+++.++....+|.++||.+.|++..
T Consensus 140 -v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 140 -VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 445999999999999999999999999999999999999887
No 207
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.09 E-value=2.3e-08 Score=91.75 Aligned_cols=317 Identities=17% Similarity=0.150 Sum_probs=180.9
Q ss_pred ccCChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----
Q 011657 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL---- 163 (480)
Q Consensus 89 ~~~~~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~---- 163 (480)
.|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+..++..+.++...+-+..++-|++.+.
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay 114 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAY 114 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHH
Confidence 578888775 566677778888999999999999999999999999999999999999999999999999999988
Q ss_pred -------------------------hHHhhhhhhhh-----hhhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhccc
Q 011657 164 -------------------------GGYGIGSLLVD-----LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMK 213 (480)
Q Consensus 164 -------------------------~g~~~g~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~ 213 (480)
+|..+++++.+ ...+.+...++......+.++..+++|..++-..-++..
T Consensus 115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~ 194 (412)
T PF01770_consen 115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKP 194 (412)
T ss_pred HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccC
Confidence 44444444443 222566666666665555666667777765422211100
Q ss_pred ccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhh---hhhhHHHHHHHHHHHHHhhCh
Q 011657 214 RKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG---KCLKALIIGAGLVLFQQITGQ 290 (480)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 290 (480)
...+ + ..+...++..+..+.. ++..+..+.........++.++++ -...+.++...+.+....+++
T Consensus 195 ~~~~-----~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy 263 (412)
T PF01770_consen 195 PAEQ-----D-----ANESESDKMNESPESS-SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGY 263 (412)
T ss_pred cccc-----c-----cccccccccccccccc-cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHH
Confidence 0000 0 0000000000000000 000000000001111111222221 122234444555666666677
Q ss_pred hHHHHhHHHHHHhc---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHH--HHHHHHHHHHhhccC
Q 011657 291 PSVLYYAASILQSA---GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI--VISLFLLGSYYLFLD 365 (480)
Q Consensus 291 ~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 365 (480)
..+..|...+.++. .. ....-|..-....+.+.++.+..|++..++.+-.-+..+.... +..++++.. .
T Consensus 264 ~qv~nYvQ~LW~~v~~~~~-~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~-----t 337 (412)
T PF01770_consen 264 YQVINYVQSLWDTVPPSDN-ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF-----T 337 (412)
T ss_pred HHHHHHHHHHHHhcCCCCC-CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-----h
Confidence 77778887777776 22 3344566777777778888888888855555543333333322 333333322 3
Q ss_pred CchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 366 DVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
++.|......+++...+..... +...-++.....+.-|...|+..++..+-..+...
T Consensus 338 ~~Iwv~Y~~yIif~~~y~fliT-iA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~ 394 (412)
T PF01770_consen 338 GNIWVCYAGYIIFRSLYMFLIT-IASFQIAKNLSEERYALVFGINTFVALVLQTILTL 394 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence 4566666666666666665443 33334444445566677777777665554444433
No 208
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.07 E-value=3.3e-09 Score=100.38 Aligned_cols=150 Identities=10% Similarity=-0.051 Sum_probs=102.7
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCch----HHHhhhHHHHHHHHHHHHHhhccCC
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP----LLLGGVSGIVISLFLLGSYYLFLDD 366 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (480)
....-++|.++++.|. +..+.++..+...+...++.++.|+++||+||+. .+.+...+ ....+. . ..
T Consensus 21 g~~~p~l~~~l~~~g~-s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~---~~~~~~----~-~~ 91 (382)
T PRK11128 21 GVFLPFWSVWLKGQGY-TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL---FAVAFW----F-GA 91 (382)
T ss_pred HHHhhhHHHHHHhcCC-CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH---HHHHHH----H-hc
Confidence 4556677888899999 9999999999999999999999999999999842 22211111 111111 1 12
Q ss_pred chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHH
Q 011657 367 VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAV 446 (480)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 446 (480)
++.+.+.......+.......|...++..+. .++|+.+.+.......+|..++|.+.+.+.++.||+..|++.++..+
T Consensus 92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 92 HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 3333333333323333344455554555554 35578888889999999999999999999999999999887776555
Q ss_pred HHHHh
Q 011657 447 LSLAF 451 (480)
Q Consensus 447 ~~~~~ 451 (480)
+..+.
T Consensus 170 ~~~~~ 174 (382)
T PRK11128 170 SMLLG 174 (382)
T ss_pred HHHHH
Confidence 44443
No 209
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.05 E-value=2.9e-09 Score=115.64 Aligned_cols=118 Identities=16% Similarity=0.032 Sum_probs=89.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhccccccc
Q 011657 311 DATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIG 390 (480)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (480)
..++..+...++.+++.+++|+++||+|||++++.+.++.++..++..+... . ...+.+++..++.+.......+..
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY--L-GWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH--H-ccHHHHHHHHHHHHHHHHhhchHH
Confidence 3577788888899999999999999999999998877665555444333211 1 223334444444445555556777
Q ss_pred ceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 391 WLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 391 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
.+++.|.+|++.|+.++|+......+|.++++.+.+.+.+.
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999998876
No 210
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.4e-09 Score=103.42 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=121.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFG 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
++.+-+++.+....+.+++.+.+|++.||+|.|+++..+.++.+++.++..+... .....+++.-++.+.......
T Consensus 71 s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~----~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 71 SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS----IGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH----hcchhhHHHHHHhHHHHhHHH
Confidence 6778899999999999999999999999999999999999998888888776432 222244555555555555556
Q ss_pred cccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh-hCccHHHHHHHHHHHHHHHhcCCCCC
Q 011657 388 PIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL-LGAGILFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 457 (480)
|....+..+-.|+++|++..++.....++|.+++-++.|.+.+. .||...|++.+++.++..++.+.+..
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 77779999999999999999999999999999999999999998 99999999999988777666544443
No 211
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.04 E-value=9.6e-10 Score=87.71 Aligned_cols=102 Identities=25% Similarity=0.478 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----------------
Q 011657 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL---------------- 163 (480)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~---------------- 163 (480)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+.+.+++.|++.+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 4556788899999999999999999999999999999999999999999999999999998876
Q ss_pred ------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHH-HHhcccC
Q 011657 164 ------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM-GMWWLPA 202 (480)
Q Consensus 164 ------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e 202 (480)
+|+.+++.+.+.. +|++.|++.++..++..+ ..++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 4555555555444 899999988887776444 4444554
No 212
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.04 E-value=5.2e-09 Score=98.97 Aligned_cols=152 Identities=10% Similarity=0.003 Sum_probs=104.3
Q ss_pred hChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHH-HHHHHHHHHhhccCC
Q 011657 288 TGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIV-ISLFLLGSYYLFLDD 366 (480)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 366 (480)
.......-+.|.++++.|. +..+.++..+...+...++.++.+.++||++|+........+.. +..+.+.. ..+
T Consensus 18 ~~~~~~~p~l~~~l~~~g~-s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~----~~~ 92 (382)
T TIGR00902 18 CAYGIFLPFFPAWLKGIGL-GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA----GAH 92 (382)
T ss_pred HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH----hhh
Confidence 3345666678899999999 99999999999999999999999999999998543322111111 11111111 122
Q ss_pred chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHH
Q 011657 367 VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAV 446 (480)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 446 (480)
+.+..++...+...+.+ ...|...++..+. .++|+.+.|.......+|.+++|.+.+.+.+..||+..|++.+.+.+
T Consensus 93 ~~~~l~~~~~l~~~~~~-~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 93 NAWLLFIAIGLFALFFS-AGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA 169 (382)
T ss_pred hHHHHHHHHHHHHHHHc-cchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 33333333333333333 3456665665442 46789999999999999999999999999999999998887765533
Q ss_pred H
Q 011657 447 L 447 (480)
Q Consensus 447 ~ 447 (480)
+
T Consensus 170 ~ 170 (382)
T TIGR00902 170 F 170 (382)
T ss_pred H
Confidence 3
No 213
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.00 E-value=1.4e-09 Score=100.47 Aligned_cols=149 Identities=16% Similarity=0.141 Sum_probs=114.9
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh-cCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhc
Q 011657 306 FSAASDATRVSILLGLFKLIMTGLAVLVVERL-GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQL 384 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (480)
+ +.+++.-....+....-+..+++||++||+ |+|+++..+.++++++.++++... ........+.+.+. ....+
T Consensus 58 ~-~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~~~~~gl~i~L~~I-~iG~G 132 (498)
T COG3104 58 F-DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---VSGPGGLYIGLALI-IVGTG 132 (498)
T ss_pred c-ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---cccccHHHHHHHHH-Hhccc
Confidence 7 777888888888888888999999999995 999999999999999999887510 01222333333333 34444
Q ss_pred ccccccceeecccCChh--hhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 385 SFGPIGWLMISEVFPLR--LRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 385 ~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
.+=+...+++.|++|++ +|-.+.++.++..++|+.++|.+.+++.++.||...|...++-..++.+..+...+..
T Consensus 133 l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 133 LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchh
Confidence 45566668899998753 4777888999999999999999999999999999999998888888887776655433
No 214
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.95 E-value=1.4e-08 Score=96.37 Aligned_cols=177 Identities=18% Similarity=0.044 Sum_probs=115.4
Q ss_pred HHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHH--HHHHHHHHHHHHHH-HHHHhhhcCchHHHhhhHHH-HHHH
Q 011657 279 AGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVS--ILLGLFKLIMTGLA-VLVVERLGRRPLLLGGVSGI-VISL 354 (480)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~d~~g~~~~~~~~~~~~-~~~~ 354 (480)
+...++.+...+.....+.|.++++.|. +..+.++.. ....+..++..++. ++..||+|||+..+....+. .+..
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~-~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~ 84 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLREDGA-PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL 84 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence 3344455555566777889999999998 888999873 55677777777777 45789999988865554332 2222
Q ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCc
Q 011657 355 FLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGA 434 (480)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~ 434 (480)
..+... .........................+....+..|..+++.++...+.......+|..+++...+.+.+..||
T Consensus 85 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 85 ASLALV--GPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHcC--CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222211 111121222222222233333334445556677777877778888888777788999999888899999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCC
Q 011657 435 GILFYAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~ 458 (480)
+..|++.+++.++..+..++..++
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999988877666655444443
No 215
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.94 E-value=5.5e-09 Score=100.67 Aligned_cols=177 Identities=15% Similarity=0.063 Sum_probs=133.0
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHH
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 352 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 352 (480)
|.+.+..++...........+..+.+.+.++.+. +..++++..++......+..++.+.+.||+|.|.+.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~-s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGS-SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCC-CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 3344444444444444444445566777788888 777799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCchhHHHHH-HHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 353 SLFLLGSYYLFLDDVPAVAVVA-LLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
++++..+. .+.+..++. ..+.+.+.+..+.|.. ..+...|+ ++|+.+.|+......+|.++.|.+...+.+.
T Consensus 124 g~~lssF~-----~~i~~l~lt~gvi~G~G~~~~~~pai-viv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 124 GLLLSSFA-----TSLWQLYLTFGVIGGLGLGLIYLPAV-VILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHH-----hhHHHHHHHHHHHhhccchhhhcchh-hhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 99887652 233333322 2333344444455554 56666666 7899999999999999999999999999999
Q ss_pred hCccHHHHHHHHHHHHHHHhcCCCCC
Q 011657 432 LGAGILFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 432 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 457 (480)
.||+..+++.+.+.+-..+....++|
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999988777777666665
No 216
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.94 E-value=1.3e-06 Score=81.97 Aligned_cols=156 Identities=17% Similarity=0.039 Sum_probs=98.0
Q ss_pred ccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 011657 261 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 340 (480)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 340 (480)
..++.-++.+-+..-+-..++++. .. .+...+..|+...|+ ++...+..-....+.++.+.++..++.+|+|..
T Consensus 250 ~~w~~Y~~q~vflas~alalLY~T-VL----sf~~lmt~yl~~~G~-s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv 323 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALLYFT-VL----SFGGLMTAYLKSQGY-SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV 323 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHHHHH-Hh----cCcHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 345555555544433332233322 22 223455666777899 899999999999999999999999999999988
Q ss_pred hHHHhhhHHHHHHHHHHHHHhhccCCc-hhHH---HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHH
Q 011657 341 PLLLGGVSGIVISLFLLGSYYLFLDDV-PAVA---VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFG 416 (480)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 416 (480)
+.-.++.....+++.+....++.+... +... ++......=.+--++-.....+.+|..|+++||...|+-+..+++
T Consensus 324 r~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 324 RAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSL 403 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence 887777776665555544433333322 1211 111111111111122233346889999999999999999999887
Q ss_pred HHHhHh
Q 011657 417 ANALVT 422 (480)
Q Consensus 417 g~~i~~ 422 (480)
...+.-
T Consensus 404 f~ll~~ 409 (432)
T PF06963_consen 404 FELLSF 409 (432)
T ss_pred HHHHHH
Confidence 765433
No 217
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.94 E-value=9.4e-09 Score=99.34 Aligned_cols=163 Identities=19% Similarity=0.179 Sum_probs=105.4
Q ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hcCch-HHHhhhHHHHHHHHHHHHHhhccCCc-hh
Q 011657 296 YAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER----LGRRP-LLLGGVSGIVISLFLLGSYYLFLDDV-PA 369 (480)
Q Consensus 296 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 369 (480)
..+++.+..|. ++.+.+...+...+...+..++.|+++|| +|||+ .++.+....+++.+++.......... ..
T Consensus 22 l~~~~~~~~g~-s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGL-SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHccCC-CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34444456788 89999999999999999999999999998 56644 55566666666655543211000001 11
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccC-ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-------hhCccHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVF-PLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-------LLGAGILFYAF 441 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-------~~g~~~~~~~~ 441 (480)
+......++..+......|. .++..|.. ++++|++..++.+....+|+.+++.+.+.+.. ..+|+..+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~-~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPY-WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHhhcccH-hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 22222233333333322233 36777776 56889999999888888888777776666553 34677788888
Q ss_pred HHHHHHHHHhcCCCCCCCC
Q 011657 442 GVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~ 460 (480)
+++.++..++.++..+|++
T Consensus 180 ~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHcCCEecC
Confidence 8877777666655566543
No 218
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.92 E-value=2.4e-08 Score=94.92 Aligned_cols=131 Identities=18% Similarity=0.036 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh--HHHHHHHHHHHHHhcccccccceeecccC
Q 011657 321 LFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA--VAVVALLLYVGCYQLSFGPIGWLMISEVF 398 (480)
Q Consensus 321 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+...++.++.|+++||+|||+++..+.++..++.++............+ ..+....+..+.......+....++.|.+
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 3335688999999999999999999988888877766542100000000 11222223333333334455568899999
Q ss_pred ChhhhhhHHHHHHHHHHHHHHhHhhcchhhH--------HhhCccHHHHHHHHHHHHHHHh
Q 011657 399 PLRLRGRGLSVAVLVNFGANALVTFAFSPLK--------DLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 399 p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
|+++|+...++.+....+|..+++.+.+.+. +..+|+..+++.+.+.+++...
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887765543 3467888887776666555443
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.91 E-value=1.5e-08 Score=87.28 Aligned_cols=142 Identities=18% Similarity=0.091 Sum_probs=104.2
Q ss_pred hhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCC
Q 011657 287 ITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDD 366 (480)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (480)
....+.+..|.|.+.+..|+ +..+...+.....++..+| ++.|.+.|++|.+.++.++.+...++..++.........
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~-sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGY-SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred cCcccchhhhhHHHHHHhCC-CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 34456788899999999999 9999999999999998865 888999999999999999999999988877654433222
Q ss_pred -chhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 367 -VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 367 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
.+.+.+.......+.....+.........+.+| ++||++.|+.-....+++++-..+...+.+.
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 233333333333322222223333345567898 6799999999999999999888877766654
No 220
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.90 E-value=9.7e-09 Score=101.42 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=117.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFG 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
+.....+..++..++..+|.++.|.++||+|||+++..+.++..++.++.++ ..++..+..+-++.+.+..+..
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~------a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF------APNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH------hCcHHHHHHHHHHHHhhccchh
Confidence 5667888899999999999999999999999999999999999888876664 3555666666666666666666
Q ss_pred cccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 388 PIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
...+.+..|.+++++|+.+..+ ..+...++.+++...+++.. +|++.+++.....++..+. +++.+|.+
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 7778999999999999999999 88888888999998888887 8888888888877766665 44455554
No 221
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.85 E-value=3.7e-08 Score=94.01 Aligned_cols=153 Identities=14% Similarity=0.033 Sum_probs=115.5
Q ss_pred HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 011657 302 QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGC 381 (480)
Q Consensus 302 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (480)
++.+. ...+-+...+.+.++.+++.++++.+.||++-.+.+....++..+..++-.. .++...++++-++.+.
T Consensus 74 edl~~-~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~------~~s~~~~ialr~llGl 146 (495)
T KOG2533|consen 74 EDLKL-VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA------VHSFPGLIALRFLLGL 146 (495)
T ss_pred cccch-hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH------HhhhHHHHHHHHHHHH
Confidence 34445 6678899999999999999999999999999555544433332222221111 2445555555566666
Q ss_pred HhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH------HhhCccHHHHHHHHHHHHHHHhcCCC
Q 011657 382 YQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK------DLLGAGILFYAFGVIAVLSLAFIFXX 455 (480)
Q Consensus 382 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~ 455 (480)
+..+..|....++...+.+++|+.-+|+.+....+|+++|+.+...+. ...||++.|++-+++.++..++.+++
T Consensus 147 ~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 147 FESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFF 226 (495)
T ss_pred HhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEE
Confidence 666666777789999999999999999999999999999999888764 34689999999999999999888888
Q ss_pred CCCCCC
Q 011657 456 XXXXXX 461 (480)
Q Consensus 456 ~~~~~~ 461 (480)
+|+...
T Consensus 227 lp~~P~ 232 (495)
T KOG2533|consen 227 LPDNPS 232 (495)
T ss_pred ecCChh
Confidence 876544
No 222
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=9.9e-08 Score=85.81 Aligned_cols=159 Identities=12% Similarity=-0.028 Sum_probs=118.1
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
......|.+.+..+. +..++++.......+..+..+..+++.+|+|+|+.++.+..++++++.++.-. .....+..
T Consensus 31 l~diLip~l~~~f~l-s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA---a~~~~y~~ 106 (422)
T COG0738 31 LNDILIPHLKEVFDL-TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA---ASSKSYGF 106 (422)
T ss_pred cchhhHHHHHHHhCc-cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh---hhhhhHHH
Confidence 445567888777888 89999999999999999999999999999999999999999999999887421 11222322
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh-------------------h
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL-------------------L 432 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~-------------------~ 432 (480)
.+...+..+............++..+.|++..+.-+.+...++.+|++++|.+.+.++.+ .
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~ 186 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADAS 186 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHH
Confidence 222222222222233445557888898988888899999999999999999999988872 1
Q ss_pred CccHHHHHHHHHHHHHHHhcCC
Q 011657 433 GAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 433 g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.++.++...+...++..+....
T Consensus 187 ~v~~pYl~~~~~lvll~v~~~~ 208 (422)
T COG0738 187 SVQFPYLILAGLLVLLAVLILL 208 (422)
T ss_pred hhhhHHHHHHHHHHHHHHHHHh
Confidence 2556777777666665555443
No 223
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.78 E-value=3e-08 Score=94.67 Aligned_cols=112 Identities=13% Similarity=0.207 Sum_probs=89.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC----chHHHHHHHHHHHHHHhH----
Q 011657 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGIGIGL---- 163 (480)
Q Consensus 92 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~g~g~---- 163 (480)
+..+.+...++..++..++.++.|+++||+|||+++.++.++.+++..+..... +++.+++.+++.|++.+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999999999999877776642 245677789999987665
Q ss_pred -------------------------------hHHhhhhhhhhhh-----hhhHHHHhchhHHHHH-HHHHHhcccCc
Q 011657 164 -------------------------------GGYGIGSLLVDLV-----AGWRYMYGASTPLAVI-MGMGMWWLPAS 203 (480)
Q Consensus 164 -------------------------------~g~~~g~~l~~~~-----~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 203 (480)
+|+.+++.+.+.. .||+..|++.++..++ .++..++++|+
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 6777777776653 2699999998888777 45555567766
No 224
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=8.5e-08 Score=94.25 Aligned_cols=141 Identities=19% Similarity=0.087 Sum_probs=106.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccc
Q 011657 312 ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGW 391 (480)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
.+++.+...++..++.++.|+++|++|||+.+.++.+...++.++.... .+.....+.-++.+.+.+.. ..+..
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-----~~~~~l~~GR~l~G~g~G~~-~~~~p 164 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-----PSWYQLIVGRILTGLGVGGA-SVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhccchhhh-hhcch
Confidence 3799999999999999999999999999999999999999999888763 23333333333333333333 34555
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh--CccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL--GAGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
.+.+|..|++.||...+..+....+|..++ .+.+....+. +|+..+.+..+.+++..+. .++.||+.
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 899999999999999999999888776666 5666666554 7887777777777766666 45566653
No 225
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.74 E-value=3.1e-06 Score=79.25 Aligned_cols=321 Identities=15% Similarity=0.105 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhHhHHhhhhhhhhhh---
Q 011657 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLGGYGIGSLLVDLV--- 176 (480)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~g~~~g~~l~~~~--- 176 (480)
.++-+....+.+++.+.+.|+.|.|..++++...+....+..-+ +|-+.+++.-.+.|+|.+.+-..=|.++.++.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77778889999999999999999999999999999887766644 55677888999999999984444444554321
Q ss_pred -----hhhHHHHhchhHHHH-HHHHHHhcccC---chHHHHHhcccccCchhh-hHHHHHHHHHHH---hCCCCCCCChh
Q 011657 177 -----AGWRYMYGASTPLAV-IMGMGMWWLPA---SPRWLLLCAMKRKGDMQD-LRESAISCLCRL---RGQSIGDSAPT 243 (480)
Q Consensus 177 -----~~wr~~f~~~~~~~~-~~~~~~~~~~e---~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~ 243 (480)
.+-.|.+.-...+.. +.+.......+ .+.....+...+.. ... ...-....+... .-......+..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~ 213 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVL-FIDFEIKVLFGVLLAISVLSIINFDFLPSK 213 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchh-hhhHHHHHHHHHHHHHHHHHhhheeecCcc
Confidence 122222222211111 11111111111 11000000000000 000 000000000000 00000000000
Q ss_pred hHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHH--hcCCCCCcchHHHHHHHHH
Q 011657 244 EVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ--SAGFSAASDATRVSILLGL 321 (480)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~ 321 (480)
......+. .+.......+..++.-..++++......+...+.-......|...+.- ..+..+..-.+......++
T Consensus 214 ~~~~~~~~---~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~ 290 (461)
T KOG3098|consen 214 DVVNCKSS---SETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGL 290 (461)
T ss_pred chhhhhhh---ccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhH
Confidence 00000000 001111222333332222232222222211111111111222222211 2233233445666677777
Q ss_pred HHHHHHHHHHHHHhh---hcCchHHHhhhHHHHHHHHHHHHHhhccCC------------chhHHHHHHHHHHHHHhccc
Q 011657 322 FKLIMTGLAVLVVER---LGRRPLLLGGVSGIVISLFLLGSYYLFLDD------------VPAVAVVALLLYVGCYQLSF 386 (480)
Q Consensus 322 ~~~~~~~~~g~l~d~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 386 (480)
+.+++....+.+.+| +|+++++.++..+..+.+++..+......+ ........+.+..+..-..+
T Consensus 291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~ 370 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACF 370 (461)
T ss_pred HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHH
Confidence 888888888888765 577888888887777776665443221110 11333334444555555566
Q ss_pred ccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcch
Q 011657 387 GPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFS 426 (480)
Q Consensus 387 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~ 426 (480)
....+.++....| +.|..+.++.-+-..++..++-...+
T Consensus 371 ~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 371 NTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 6677788888886 77999999888888877766555544
No 226
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2e-07 Score=88.00 Aligned_cols=144 Identities=18% Similarity=0.073 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccce
Q 011657 313 TRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWL 392 (480)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (480)
+...+...+++++|.++.++++||+|||..+.++.++..++.+++..... .+.....++.-++.+...+.... ....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~--~~~~e~li~GR~i~Gl~~gl~~~-~~pm 139 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS--APSFEMLILGRLIVGLACGLSTG-LVPM 139 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHhHHHHH-HHHH
Confidence 44567888999999999999999999999998888887777776665332 22333333333333333333333 4447
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHhHhhcc-hhhHHh-hCccHHHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 393 MISEVFPLRLRGRGLSVAVLVNFGANALVTFAF-SPLKDL-LGAGILFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 393 ~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
++.|..|.+.||....+......+|..++..+. ..+.+. ..|...+.+..+.+++..+...+ .||..
T Consensus 140 yl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~-~PESP 208 (485)
T KOG0569|consen 140 YLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPF-LPESP 208 (485)
T ss_pred HHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-CCCCc
Confidence 999999999999999999988888888885443 333322 33555555555555555555444 66653
No 227
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=6.5e-07 Score=84.99 Aligned_cols=137 Identities=18% Similarity=0.223 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCC
Q 011657 320 GLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFP 399 (480)
Q Consensus 320 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 399 (480)
++..++..+..|.++||+|||..+....+...+..+.+.+. .++.++ ..-..+++... .....++++|...
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~-------~~~~~~-~~~l~g~~~~~-~s~~~a~vadis~ 142 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ-------GYWFFL-LLGLSGGFSAI-FSVGFAYVADISS 142 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH-------HHHHhh-hcccccchhhh-hhhhhhheeeccc
Confidence 67888899999999999999999988877777776665541 233333 22222222222 3455689999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCChhh
Q 011657 400 LRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSFQR 465 (480)
Q Consensus 400 ~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (480)
.+.|....|+.+.....+..++|.+.+.+....|+..++.+..+..++..+......||+..++.+
T Consensus 143 ~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 143 EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999999999999999999999999999999999999999999999999888888887655443
No 228
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.67 E-value=6.9e-08 Score=89.17 Aligned_cols=161 Identities=16% Similarity=0.190 Sum_probs=90.2
Q ss_pred hHHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHH--HHHHHHHHhhccCCc
Q 011657 291 PSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI--SLFLLGSYYLFLDDV 367 (480)
Q Consensus 291 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 367 (480)
.....+.+.++++ .|. +..+.|.+.+...+..++..++.|.++||+|.|+-++....+..+ +.+....+......+
T Consensus 24 gi~~pF~~iWL~~~~GL-s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n 102 (412)
T PF01306_consen 24 GIFLPFFPIWLTQVAGL-SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSN 102 (412)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHccccCC-CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666765 788 999999999999999999999999999999977665543332222 111111100000112
Q ss_pred hhHHHHHHHHHHHHHhcccc---cccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHH
Q 011657 368 PAVAVVALLLYVGCYQLSFG---PIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVI 444 (480)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~ 444 (480)
.+...+ +.....+..+. |+.-+++.+ .. +..+.-.|=..+.+.+|.+++..+.|.+.+ .+....|++..+.
T Consensus 103 ~~lg~i---ig~i~l~~~f~~~~~~~Ea~~er-~s-r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~ 176 (412)
T PF01306_consen 103 FWLGAI---IGGIYLGLVFNAGVPLSEAYAER-VS-RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAA 176 (412)
T ss_dssp -HHHHH---HTTTTTTTTTTTHHHHHHHHHHH-HH-HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHcccchHHHHHHHH-HH-HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHH
Confidence 111111 11111122222 233222222 22 345566788888999999999999999987 4556778876655
Q ss_pred HHHHHHhcCCCCCC
Q 011657 445 AVLSLAFIFXXXXX 458 (480)
Q Consensus 445 ~~~~~~~~~~~~~~ 458 (480)
.++..++.+...++
T Consensus 177 ~~il~lll~~~~~~ 190 (412)
T PF01306_consen 177 AIILLLLLLLLKPD 190 (412)
T ss_dssp HHHHHHHHHSS---
T ss_pred HHHHHHHHHHcCCc
Confidence 55555554444443
No 229
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.65 E-value=3.4e-07 Score=77.27 Aligned_cols=295 Identities=16% Similarity=0.230 Sum_probs=150.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhHhHHhh
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLGGYGI 168 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~g~~~ 168 (480)
++....++|.+....+-..++...+.|.++||-|||+.-+.-++.+.++++ +-.++.|-.++++|.+-|++.+.+=...
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAF 145 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHH
Confidence 788888999988888888899999999999999999976655555554433 4468899999999999999998844444
Q ss_pred hhhhh-hhh------hhh------HHHHhchhHHHHHHHHHHhc-------ccCchHHHHHhcccccCchhhhHHHHHHH
Q 011657 169 GSLLV-DLV------AGW------RYMYGASTPLAVIMGMGMWW-------LPASPRWLLLCAMKRKGDMQDLRESAISC 228 (480)
Q Consensus 169 g~~l~-~~~------~~w------r~~f~~~~~~~~~~~~~~~~-------~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (480)
-.++. +.. ..| |..|+-.++++++..+.-=. -|-.|-- .... ...-+...
T Consensus 146 EsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFd-AAac---------fLaigmAv 215 (454)
T KOG4332|consen 146 ESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFD-AAAC---------FLAIGMAV 215 (454)
T ss_pred HHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchH-HHHH---------HHHHHHHH
Confidence 44433 221 134 44555555555543222111 1222210 0000 00000000
Q ss_pred HHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCC
Q 011657 229 LCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSA 308 (480)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (480)
+...-+.+.++ +.+.++... +-+...+.+..++ ++.+...+........+..+..|.|.+-.+. .
T Consensus 216 il~~W~ENygd--ps~~kdllt-------qf~gaa~aiaSD~---ki~LLG~iqsLFE~smytFVFLWTPaLspn~---e 280 (454)
T KOG4332|consen 216 ILSSWSENYGD--PSENKDLLT-------QFKGAARAIASDE---KIALLGAIQSLFEGSMYTFVFLWTPALSPND---E 280 (454)
T ss_pred HHhhhhhccCC--hhhhHHHHH-------HhhHhHHHHhcch---HHHHHHHHHHHHhhhhheeeeeecccCCCCc---c
Confidence 00000111111 000000000 0011112222221 2222222333322222223333444432111 1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhcCc--hHHHhhhHHHHHHHHHHHHHhhc--cCCchhHHHHHHHHHHHHHhc
Q 011657 309 ASDATRVSILLGLFKLIMTGLAVLVVERLGRR--PLLLGGVSGIVISLFLLGSYYLF--LDDVPAVAVVALLLYVGCYQL 384 (480)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 384 (480)
..--|.+...+.+..++|+-+..++..|-..| ..+.+.+.+....+.+..+.... ....+...++.++.+-.+.+.
T Consensus 281 ~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGl 360 (454)
T KOG4332|consen 281 EIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGL 360 (454)
T ss_pred cCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhh
Confidence 22356777777888888887776666554333 33444444444443333222211 122334456666666666666
Q ss_pred ccccccceeecccCChhhhhhHHHHH
Q 011657 385 SFGPIGWLMISEVFPLRLRGRGLSVA 410 (480)
Q Consensus 385 ~~~~~~~~~~~~~~p~~~~~~~~~~~ 410 (480)
.+ |..+-+-.+..|.+.|++.+-+.
T Consensus 361 fw-PSimkmRsqyIPEearstimNfF 385 (454)
T KOG4332|consen 361 FW-PSIMKMRSQYIPEEARSTIMNFF 385 (454)
T ss_pred cc-hHHHHHHHhhCCHHHHhhhhhhe
Confidence 55 55557778889999998554443
No 230
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.63 E-value=4.5e-07 Score=88.27 Aligned_cols=163 Identities=15% Similarity=0.134 Sum_probs=99.0
Q ss_pred HHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hcCc-hHHHhhhHHHHHHHHHHHHHhhccC
Q 011657 292 SVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVER----LGRR-PLLLGGVSGIVISLFLLGSYYLFLD 365 (480)
Q Consensus 292 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (480)
.+..|++.|+.+ .|. ++..++.+..+..+...+..++.|+++|| +||| +.++.+.+..++++.++.. .+.
T Consensus 24 ~~~~~l~~yyt~v~Gl-s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~---~p~ 99 (473)
T PRK10429 24 IVYMYLMYYYTDVVGL-SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFS---AHL 99 (473)
T ss_pred HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHc---CCC
Confidence 444455555544 588 89999999999999999999999999994 5884 5555666666666544421 111
Q ss_pred Cc-h--h-HHHHHHHHHHHHHhcccccccceeecccC-ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-------C
Q 011657 366 DV-P--A-VAVVALLLYVGCYQLSFGPIGWLMISEVF-PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-------G 433 (480)
Q Consensus 366 ~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-------g 433 (480)
.. . . +..+..+++..++.....|.. ++..|+. ++++|....+.-....++|+.+.+.+...+.+.. +
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~~t~~~ip~~-al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g 178 (473)
T PRK10429 100 FEGTAQYVFVCVTYILWGMTYTIMDIPFW-SLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFG 178 (473)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHcchHH-hhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 11 1 1 222222333334443333333 7778887 5788999888877777777666665544443322 3
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 434 AGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
+.....+.+++.+++.++.++..+|+
T Consensus 179 ~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 179 FQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceec
Confidence 34444555555555555555545554
No 231
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.60 E-value=1.3e-07 Score=65.55 Aligned_cols=80 Identities=23% Similarity=0.238 Sum_probs=73.6
Q ss_pred cccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Q 011657 65 GYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (480)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 144 (480)
|..+..++|.+|.+++| .++|..+.+++.+..++||.+|.+...++.++..+++.+..+++...+..+.+++.
T Consensus 5 GigRFayTplLP~M~~~-------~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-------GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhHHHHHHhHhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567889999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHH
Q 011657 145 PDFIIMV 151 (480)
Q Consensus 145 ~~~~~l~ 151 (480)
++++.+.
T Consensus 78 ~~~~~w~ 84 (85)
T PF06779_consen 78 HSFWLWS 84 (85)
T ss_pred hchHHHh
Confidence 9887653
No 232
>PRK09669 putative symporter YagG; Provisional
Probab=98.60 E-value=2.9e-07 Score=89.01 Aligned_cols=164 Identities=18% Similarity=0.124 Sum_probs=101.3
Q ss_pred HHhH-HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hcCch-HHHhhhHHHHHHHHHHHHHhhccCCc
Q 011657 294 LYYA-ASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER----LGRRP-LLLGGVSGIVISLFLLGSYYLFLDDV 367 (480)
Q Consensus 294 ~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (480)
..|+ .++.+..|. ++..++.+..+..+...+..++.|+++|| +|||+ .++.+.+..+++.+++..........
T Consensus 29 ~~~l~~~~t~~~gl-s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 29 MLFLAYFYTDVFGL-SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 3344 444456788 89999999999999999999999999998 66644 45556566655554432210000011
Q ss_pred -hhHHHHHHHHHHHHHhcccccccceeecccC-ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-------CccHHH
Q 011657 368 -PAVAVVALLLYVGCYQLSFGPIGWLMISEVF-PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-------GAGILF 438 (480)
Q Consensus 368 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-------g~~~~~ 438 (480)
..+..+...++..++.....|.. ++..|.. ++++|.+..+.......+|+.+++.+...+.... ||...+
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~-al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~ 186 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYC-AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAM 186 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHH-HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH
Confidence 12223333333444443333443 7778876 5577998888888888888888776655554433 445566
Q ss_pred HHHHHHHHHHHHhcCCCCCCC
Q 011657 439 YAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~ 459 (480)
.+.++++++..++.++..+|+
T Consensus 187 ~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 187 MVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHHhCCeEEe
Confidence 666666666655555544443
No 233
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.56 E-value=9e-06 Score=74.92 Aligned_cols=70 Identities=17% Similarity=0.302 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH
Q 011657 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 94 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 163 (480)
--.+.+.-+-.+...+..+.+.++.+|+..+.=..+..+++.++.++.++++|.+.-+++-.+.+++.|.
T Consensus 59 ~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~ 128 (402)
T PF02487_consen 59 VSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGL 128 (402)
T ss_pred ccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhh
Confidence 3344555555667777777888889998766556677778889999999999999888888999888887
No 234
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.53 E-value=6.4e-07 Score=81.82 Aligned_cols=115 Identities=10% Similarity=-0.050 Sum_probs=83.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCC-chhHHHHHHHHHHHHHhccc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDD-VPAVAVVALLLYVGCYQLSF 386 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 386 (480)
++...+.+.....++.+.|+++.|++.||+|||+++...++++.++.++.++....... .....+.+.-.+.+...++=
T Consensus 82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGD 161 (538)
T KOG0252|consen 82 PSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGD 161 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCC
Confidence 56677888999999999999999999999999999998888888887755432222122 12233333334444444455
Q ss_pred ccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 387 GPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 387 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
.|+..+..+|....+.||.-.+.+.+.+..|...|.
T Consensus 162 YPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 162 YPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred CcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 788889999999999999988887777666544443
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.51 E-value=8.3e-07 Score=85.93 Aligned_cols=160 Identities=16% Similarity=0.035 Sum_probs=99.4
Q ss_pred HHHHhHHHHH-HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc-----CchHHHhhhHHHH-HHHHHHHHHhhcc
Q 011657 292 SVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG-----RRPLLLGGVSGIV-ISLFLLGSYYLFL 364 (480)
Q Consensus 292 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~~~~~~~-~~~~~~~~~~~~~ 364 (480)
......+.++ ++.|. +..+.+...+...+...+-.+ .|.++||++ ||+.+.++.++.. ++...+. .
T Consensus 43 l~~~~~~~~l~~~lg~-s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~----~- 115 (468)
T TIGR00788 43 LMRLPLSPMLTDDLGL-DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP----G- 115 (468)
T ss_pred HhhhhhhHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc----c-
Confidence 3333444444 45788 888888888888888777555 999999996 5666666654442 2222111 1
Q ss_pred CCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhH---HHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHH
Q 011657 365 DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRG---LSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAF 441 (480)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~ 441 (480)
..+.........+.........-.....+..|..+ +.++.. .++......+|..+++.+.|.+.+..+|+..|++.
T Consensus 116 ~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~ 194 (468)
T TIGR00788 116 KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLIT 194 (468)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 12222222222233333333334456688888887 545443 33444445689999999999999999999999998
Q ss_pred HHHHHHHHHhcCCCCCCCC
Q 011657 442 GVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~ 460 (480)
+.+.++..+..+ +.+|++
T Consensus 195 a~l~ll~~~~~~-~~~E~~ 212 (468)
T TIGR00788 195 AALLLLQLFVSN-LSKERR 212 (468)
T ss_pred HHHHHHHHHHHH-hccccc
Confidence 888777744433 355543
No 236
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.50 E-value=6.5e-06 Score=73.78 Aligned_cols=159 Identities=17% Similarity=0.111 Sum_probs=103.5
Q ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHH
Q 011657 296 YAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVAL 375 (480)
Q Consensus 296 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (480)
|.-.++++.|+ +..+.+.++........+...+.|.+.||+|||+..+..+++..++++.-. .++...+.+.
T Consensus 56 Y~Y~LY~~yg~-~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-------~~~~~~L~~G 127 (354)
T PF05631_consen 56 YLYALYESYGF-SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-------SSNYPVLLLG 127 (354)
T ss_pred hhHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-------ccccHHHHHH
Confidence 33344577888 888999999999999999999999999999999999888888888887542 2333333333
Q ss_pred HHHHHH-Hhcccccccceeecc----cCChhhhhhHHHHHHHH-HHHHHHhHhhcchhhHHhhCc--cHHHHHHHHHHHH
Q 011657 376 LLYVGC-YQLSFGPIGWLMISE----VFPLRLRGRGLSVAVLV-NFGANALVTFAFSPLKDLLGA--GILFYAFGVIAVL 447 (480)
Q Consensus 376 ~~~~~~-~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~-~~~g~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~~ 447 (480)
-++++. .+..+...-.=++.| -+|++..+...+..... +.+..++...+...+.+..|. ..+|.....+.++
T Consensus 128 RvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 128 RVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 333332 222221111012222 35666666666655533 444555666666667776654 6688888888888
Q ss_pred HHHhcCCCCCCCCCC
Q 011657 448 SLAFIFXXXXXXXXS 462 (480)
Q Consensus 448 ~~~~~~~~~~~~~~~ 462 (480)
+.+++....+|..+.
T Consensus 208 ~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 208 AAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHhcccccCCC
Confidence 877776666666543
No 237
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.48 E-value=4.4e-06 Score=74.30 Aligned_cols=154 Identities=18% Similarity=0.083 Sum_probs=119.7
Q ss_pred hHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 291 PSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
..+.-.++.+-++.|. +...+++++++..++..+..++..++.+|+|.++.+..++++.+++..+=.. .....
T Consensus 29 tsvgPLL~~Ir~~~gl-s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~------~~~~~ 101 (395)
T COG2807 29 TSVGPLLDEIRQDLGL-SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL------GGLPL 101 (395)
T ss_pred hhhhhhHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc------ccHHH
Confidence 3445566777788899 8999999999999999999999999999999999999988888887775432 22222
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-CccHHHHHHHHHHHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-GAGILFYAFGVIAVLSL 449 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 449 (480)
.+....+.+.+... .+.+....+.+.+| ++.+..+|++.+..++++++++.+..++.++. ||+....+.+..++++.
T Consensus 102 L~~gt~l~G~gIav-~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl 179 (395)
T COG2807 102 LFLGTLLAGAGIAV-INVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL 179 (395)
T ss_pred HHHHHHHHHhhHHH-HHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH
Confidence 33333333333222 23455578889999 66899999999999999999999999999887 69999888888888877
Q ss_pred HhcC
Q 011657 450 AFIF 453 (480)
Q Consensus 450 ~~~~ 453 (480)
++-+
T Consensus 180 ~~Wl 183 (395)
T COG2807 180 LIWL 183 (395)
T ss_pred HHHh
Confidence 6643
No 238
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.45 E-value=5.6e-07 Score=86.58 Aligned_cols=162 Identities=19% Similarity=0.212 Sum_probs=110.0
Q ss_pred HhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh----hhcCchH-HHhhhHHHHHHHHHHHHHhh--ccCCc
Q 011657 295 YYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE----RLGRRPL-LLGGVSGIVISLFLLGSYYL--FLDDV 367 (480)
Q Consensus 295 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~ 367 (480)
+..+++.+..|. ++...+.......+...+..++.|.++| |+|||+. ++.+.+..+++++++..... .....
T Consensus 23 ~~~~f~~~~~gl-~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 23 YLLYFYTDVLGL-SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 344555566688 8899999999999999999999999999 7887665 45677777776666542100 00011
Q ss_pred h-hHHHHHHHHHHHHHhcccccccceeecccCC-hhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-------CccHHH
Q 011657 368 P-AVAVVALLLYVGCYQLSFGPIGWLMISEVFP-LRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-------GAGILF 438 (480)
Q Consensus 368 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-------g~~~~~ 438 (480)
. .+..+..+++..++.....|.. ++..|..+ +++|....+.-..+..+|..+...+.+.+.+.. +|....
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~-al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYN-ALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchh-hcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 1 1223334444445554444444 78899887 468999999999888888877777777766543 355666
Q ss_pred HHHHHHHHHHHHhcCCCCCC
Q 011657 439 YAFGVIAVLSLAFIFXXXXX 458 (480)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~ 458 (480)
++.+++.+++.++..+..+|
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 67777777777777776676
No 239
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.45 E-value=5.1e-07 Score=84.67 Aligned_cols=155 Identities=12% Similarity=-0.008 Sum_probs=106.0
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcC-chHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHH
Q 011657 304 AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCY 382 (480)
Q Consensus 304 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (480)
.+- +.+..|+......++..++.++.|+...|.+. |+.++.+.+++.++.++.......++...++.++.-++. +..
T Consensus 66 ~~A-~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~-Gvg 143 (488)
T KOG2325|consen 66 PTA-TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILT-GVG 143 (488)
T ss_pred CCC-CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHc-CcC
Confidence 455 67788999999999999999999999999886 888899999999999988544443333333333332222 222
Q ss_pred hcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh-------------hCccHHHHHHHHHHHHHH
Q 011657 383 QLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL-------------LGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 383 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~ 449 (480)
.. .....=.|+++..-.+.|.++++..+....+|.++||.+...+... .-|..+-|+++++.++..
T Consensus 144 ~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~ 222 (488)
T KOG2325|consen 144 VG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYI 222 (488)
T ss_pred cc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHH
Confidence 22 2233347788866667788888888887777777777654332210 114457788888888888
Q ss_pred HhcCCCCCCCCC
Q 011657 450 AFIFXXXXXXXX 461 (480)
Q Consensus 450 ~~~~~~~~~~~~ 461 (480)
++.+.+.+|..+
T Consensus 223 v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 223 VIILFFFKEVYR 234 (488)
T ss_pred HHHHhheeeccc
Confidence 887777776543
No 240
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.43 E-value=3.9e-09 Score=102.43 Aligned_cols=145 Identities=15% Similarity=0.046 Sum_probs=102.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhccccccc
Q 011657 311 DATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIG 390 (480)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (480)
..++..+...++..+|.++.|+++||+|||+.+..+..+..++.++..+.. ...+...+...-++.+...++..+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAP---SYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccc
Confidence 357788999999999999999999999999999999998888887765420 00134444444444444444445666
Q ss_pred ceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh---hCccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 391 WLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL---LGAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 391 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
..++.|..|++.|+...++.+....+|..++..+.-.+.+. .+|+..+.+.++..++..+.. .+.||.
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pES 194 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc
Confidence 79999999999999999999988888877776655433332 347777776666665544443 445654
No 241
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.40 E-value=3e-06 Score=79.75 Aligned_cols=152 Identities=18% Similarity=0.219 Sum_probs=91.0
Q ss_pred hhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc-CchHHHhhhHHHHHHHHHHHHHhhccCCch
Q 011657 290 QPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG-RRPLLLGGVSGIVISLFLLGSYYLFLDDVP 368 (480)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (480)
+..+..|.+.++++.|+ +..+.|.+.+...+..+++.++.|.++||.+ +|+.+.+..++.++.+..... .++.
T Consensus 18 ~G~~~p~~~~~L~~~G~-s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~-----~~~f 91 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGF-SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF-----SSSF 91 (400)
T ss_pred HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH-----hccH
Confidence 34566678889999998 9999999999999999999999999999986 456665555554444433322 2233
Q ss_pred hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc-hhhHHhhC---ccHHHHHHHHH
Q 011657 369 AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF-SPLKDLLG---AGILFYAFGVI 444 (480)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~-~~~~~~~g---~~~~~~~~~~~ 444 (480)
+..+....++ ..+.....|+..++..+... .++.-.|-....+.+|-+++.... +.+.+..+ ....+++.+.+
T Consensus 92 ~~~~~~~~l~-~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 168 (400)
T PF03825_consen 92 WWLFVIMLLF-SFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAIL 168 (400)
T ss_pred HHHHHHHHHH-HHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Confidence 3333333333 33333344565566655554 244455666666666666664432 22232222 22345555554
Q ss_pred HHHHHH
Q 011657 445 AVLSLA 450 (480)
Q Consensus 445 ~~~~~~ 450 (480)
.++...
T Consensus 169 ~~ll~~ 174 (400)
T PF03825_consen 169 SLLLAG 174 (400)
T ss_pred HHHHHH
Confidence 444433
No 242
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.38 E-value=9.4e-06 Score=74.06 Aligned_cols=74 Identities=18% Similarity=0.268 Sum_probs=60.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 163 (480)
+|.++.+.++..+.+..+..+|.++.+++.||+|+|+++.++.++..++.++....++...+ .+-++.|++.+.
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~ 246 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSI 246 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999998888888887766665554332 344466776665
No 243
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.37 E-value=0.00028 Score=70.57 Aligned_cols=110 Identities=15% Similarity=0.307 Sum_probs=81.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPD--------FIIMVVGRFVFGI 159 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~ 159 (480)
+|.+......+...+....-+..+++|.++|+ +||++.+.++.++..+|.++.+++.. ...++++-.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 68888999999999999999999999999996 59999999999999999988877521 1234555666666
Q ss_pred HHhH---------------------------------hHHhhhhhhhhhh----------hhhHHHHhchhHHHHHHHHH
Q 011657 160 GIGL---------------------------------GGYGIGSLLVDLV----------AGWRYMYGASTPLAVIMGMG 196 (480)
Q Consensus 160 g~g~---------------------------------~g~~~g~~l~~~~----------~~wr~~f~~~~~~~~~~~~~ 196 (480)
|.|+ +|..++..+.... .+|...|.+.++..++.++.
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 6666 4444444443211 25888888888887775544
Q ss_pred Hh
Q 011657 197 MW 198 (480)
Q Consensus 197 ~~ 198 (480)
..
T Consensus 178 f~ 179 (654)
T TIGR00926 178 FM 179 (654)
T ss_pred HH
Confidence 43
No 244
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=8.1e-06 Score=79.02 Aligned_cols=166 Identities=19% Similarity=0.115 Sum_probs=102.8
Q ss_pred HHHHhHHHH-HHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hcCchH-HHhhhHHHHHHHHHHHHHhhccC
Q 011657 292 SVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER----LGRRPL-LLGGVSGIVISLFLLGSYYLFLD 365 (480)
Q Consensus 292 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 365 (480)
....|+.++ .+..|. ++..++.+..+.-+.-.+.-++.|+++|| +|||+. ++++.+..+++++++........
T Consensus 27 ~~~~~l~~fyt~~~Gl-~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~ 105 (460)
T PRK11462 27 NVMLYMMFFYTDIFGI-PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSM 105 (460)
T ss_pred HHHHHHHHHHHHhhCC-CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCc
Confidence 333444444 455677 89999999999999999999999999997 577654 45565666666554422110001
Q ss_pred Cc-hhHHHHHHHHHHHHHhcccccccceeecccCC-hhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-------ccH
Q 011657 366 DV-PAVAVVALLLYVGCYQLSFGPIGWLMISEVFP-LRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-------AGI 436 (480)
Q Consensus 366 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-------~~~ 436 (480)
.. ..+..+..+++..++.....|.. ++..|+.+ +++|.+..+.-.....+|+.+++.+...+....| |..
T Consensus 106 ~~~~~y~~~~~~~~~~~~t~~~ipy~-al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~ 184 (460)
T PRK11462 106 NGKMIYAAITYTLLTLLYTVVNIPYC-ALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG 184 (460)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 11 12223333334444444434443 67777765 6889999999999999988888777666655443 344
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCC
Q 011657 437 LFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
...+++++.+++..+.+...+|+
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcceec
Confidence 44555555555555555444543
No 245
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.31 E-value=8.6e-06 Score=78.33 Aligned_cols=115 Identities=18% Similarity=0.192 Sum_probs=99.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHHHHHHHHh--------cCchHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTAL--------APDFIIMVVGRFVFG 158 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G 158 (480)
+|.+..+...+.-+..+..++|++++|++.||+|.| +++.++++++.+..+...+ .++-+.+.+.-++.|
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G 391 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIG 391 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999 8999999888777766666 678889999999999
Q ss_pred HHHhH----------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCc
Q 011657 159 IGIGL----------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 203 (480)
Q Consensus 159 ~g~g~----------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 203 (480)
+..|. +||.+-+.+.+...+-|+.+....++.++.+++.+.++..
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 99988 8888888888877668999888888887766666666544
No 246
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.23 E-value=3.3e-05 Score=77.03 Aligned_cols=158 Identities=15% Similarity=0.088 Sum_probs=106.0
Q ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh-hcCchHHHhhhHHHHHHHHHHHHHhhccCC-c-hhHHH
Q 011657 296 YAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLFLDD-V-PAVAV 372 (480)
Q Consensus 296 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 372 (480)
+..++.+..+. +...+...........-+..+++|+++|+ +|+++.+..+.++..++..++.+....... . .....
T Consensus 10 LvlYl~~~lg~-~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 10 LVLYFLNFLGF-SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 33344455677 66777777777777777888899999996 699999999888888888776542111000 0 11112
Q ss_pred HHHHHHHHHHhcccccccceeecccCChh---hhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-------CccHHHHHHH
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVFPLR---LRGRGLSVAVLVNFGANALVTFAFSPLKDLL-------GAGILFYAFG 442 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-------g~~~~~~~~~ 442 (480)
...+.+..++..+.-|...+...|.++++ .+.....+.+...++|+.+++.+.+++.+.. +|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 22233333334444566668888888643 4677888888899999999999999887543 4777888877
Q ss_pred HHHHHHHHhcCC
Q 011657 443 VIAVLSLAFIFX 454 (480)
Q Consensus 443 ~~~~~~~~~~~~ 454 (480)
++.+++.++...
T Consensus 169 i~m~ia~lvf~~ 180 (654)
T TIGR00926 169 ILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHH
Confidence 777777666443
No 247
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.17 E-value=1.3e-05 Score=71.28 Aligned_cols=177 Identities=11% Similarity=0.010 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHH
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 352 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 352 (480)
+.........+..............|..-...|. +..+..++......+..+++...|.+.|++|||+..........+
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~-s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v 155 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP-SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGV 155 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch-hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHH
Confidence 3333333333333333322333444444444555 788899999999999999999999999999999987766555444
Q ss_pred HHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 353 SLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
.-.+-+ .+.+...+..+-...++..++ .|...++-.|..|..+|+.-+-+. +...+|.++...+.-..+.+.
T Consensus 156 ~~~is~------~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 156 FGVISG------ASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHhhc------CCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 333322 222322222222222222222 566667888999999998877666 778888888888887788889
Q ss_pred CccHHHHHHHHHHHHHHHhcCCCCCCC
Q 011657 433 GAGILFYAFGVIAVLSLAFIFXXXXXX 459 (480)
Q Consensus 433 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (480)
||++.+........+.+.+.++ .+|.
T Consensus 228 gwr~~l~~~~~pl~~~a~f~~w-~~ES 253 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARFLVW-VYES 253 (528)
T ss_pred hHHHHHHHHHhHHHHHHHHHhh-cccC
Confidence 9998877777665555555444 4443
No 248
>PRK09848 glucuronide transporter; Provisional
Probab=98.14 E-value=3.8e-05 Score=74.47 Aligned_cols=57 Identities=25% Similarity=0.321 Sum_probs=42.2
Q ss_pred hHHHHHH-hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh----cCchHH-HhhhHHHHHH
Q 011657 296 YAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL----GRRPLL-LGGVSGIVIS 353 (480)
Q Consensus 296 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----g~~~~~-~~~~~~~~~~ 353 (480)
|.+.|++ ..|. ++.+++....+..+...+..++.|+++||. |||+.. ..+.+...+.
T Consensus 30 ~l~~y~~~~~gl-~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 30 FLLSYYTDVAGV-GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 3333444 4588 899999999999999999999999999996 666544 4444444333
No 249
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.12 E-value=0.00028 Score=67.19 Aligned_cols=112 Identities=13% Similarity=-0.015 Sum_probs=58.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcCc-hHHHhhhHHHHHHHHHHHHHhhcc-------CCchhHHHHHHHHHHHHH
Q 011657 311 DATRVSILLGLFKLIMTGLAVLVVERLGRR-PLLLGGVSGIVISLFLLGSYYLFL-------DDVPAVAVVALLLYVGCY 382 (480)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 382 (480)
..-.......++-.+|+.+..+.. ..++| +.+.+..+.=.+...++.+....+ -.+.+..++. .+..+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~-~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIIL-MLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHH-HHHHHHh
Confidence 345666777888888887654431 11222 123222222222222222211110 1233333333 3333333
Q ss_pred hcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhc
Q 011657 383 QLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFA 424 (480)
Q Consensus 383 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 424 (480)
.+......+.+..+..++++|..+..+...+-.+|-.+|..+
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445666788888888999888888888877777766654
No 250
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.07 E-value=2.4e-05 Score=71.35 Aligned_cols=115 Identities=17% Similarity=0.143 Sum_probs=96.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
+|++..+...+.....+..++|++++|+|.||+|.|+++.++++++.+.++..-+...-..+.++-.+.|...|+
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 899999999999999999999999999999999999999999999999999888877777777777788887777
Q ss_pred -----------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcccCc
Q 011657 164 -----------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 203 (480)
Q Consensus 164 -----------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 203 (480)
+||.+-+.+.+...+-|.-+....++.++..+..+.+|+.
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 7777777777777677877777766666666666666654
No 251
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.07 E-value=5.1e-05 Score=71.32 Aligned_cols=167 Identities=25% Similarity=0.263 Sum_probs=109.1
Q ss_pred HHHHhHHHHHHh-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hcCc-hHHHhhhHHHHHHHHHHHHHhhcc-
Q 011657 292 SVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVER----LGRR-PLLLGGVSGIVISLFLLGSYYLFL- 364 (480)
Q Consensus 292 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~~- 364 (480)
....|+.+++.+ .|. ++..+|.+..+.-+.-.+.-++.|.++|| +||+ +.++++.+..++...++.......
T Consensus 30 ~~~~yLl~fYTdv~Gi-s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~ 108 (467)
T COG2211 30 IVVLYLLFFYTDVFGL-SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSM 108 (467)
T ss_pred HHHHHHHHHHhcccCC-cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCccc
Confidence 444555555555 566 99999999999999999999999999997 4654 445566565555555443211000
Q ss_pred CCchhHHHHHHHHHHHHHhcccccccceeecccC-ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh-------CccH
Q 011657 365 DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVF-PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL-------GAGI 436 (480)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-------g~~~ 436 (480)
........+...++..++.....|-. ++..|+. .+++|.+..+.-..+..+|+.+...+.+++.... |++.
T Consensus 109 ~~k~~ya~vtY~l~~l~YT~vniPy~-al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~ 187 (467)
T COG2211 109 TGKLIYALVTYMLLGLGYTLVNIPYG-ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQG 187 (467)
T ss_pred CcchHHHHHHHHHHHHHHHheeCchh-hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHH
Confidence 12233444455556666666555555 6777765 4478999999999999999888888887777654 3444
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCC
Q 011657 437 LFYAFGVIAVLSLAFIFXXXXXXX 460 (480)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480)
...+++++..+..+++++-.+|+.
T Consensus 188 ~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 188 TALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccc
Confidence 555555555556666555555543
No 252
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.06 E-value=1.1e-05 Score=55.72 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=49.6
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
.+..-|-++...++ .|+++.|+|.+.++..+...++++++|.++||+|+++.......++
T Consensus 16 ~g~~~Pfl~~~~~~-------~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 16 LGCLYPFLPLYLKQ-------LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHhhhhHhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34455556665555 7999999999999999999999999999999999988877665543
No 253
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.05 E-value=7.7e-05 Score=68.56 Aligned_cols=123 Identities=15% Similarity=0.024 Sum_probs=82.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC-Cchh--HHHHHHHHHHHHHhc
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-DVPA--VAVVALLLYVGCYQL 384 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~ 384 (480)
+...+-+...++.+..++..+.+-|+.||+|-|..++.+....+++..+=.......- +..+ .....-.+... ...
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~-Aq~ 155 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA-AQP 155 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH-hhh
Confidence 5667888889999999999999999999999999999999888888776443211100 1222 11111111111 111
Q ss_pred ccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 385 SFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 385 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
....+..-...-.+|+++|+++..+..+.+.+|.+++..+-+.+..+
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 11122223444568999999999999999999988888777766654
No 254
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.03 E-value=4.1e-05 Score=52.82 Aligned_cols=63 Identities=16% Similarity=0.267 Sum_probs=53.2
Q ss_pred HHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhH
Q 011657 285 QQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVS 348 (480)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 348 (480)
..++....+.-|.+.++++.|. ++.+.+.+..+..+..+++.++.|+++||.++++.......
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl-~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGL-SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3344455667788889999999 99999999999999999999999999999999887765443
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.93 E-value=5.4e-05 Score=69.18 Aligned_cols=132 Identities=15% Similarity=0.035 Sum_probs=81.9
Q ss_pred HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc-----CchHHHh-hhHHHHHHHHHHHHHhhccCC-------ch
Q 011657 302 QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG-----RRPLLLG-GVSGIVISLFLLGSYYLFLDD-------VP 368 (480)
Q Consensus 302 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~ 368 (480)
.+.+. +..-.+.+.....+. .+.++..|+.+|+.+ ||..+++ +...+..+..+.......... +.
T Consensus 8 vEL~v-pA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 8 VELGV-PAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHhcc-HHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 44455 444444444444433 346889999999988 7765554 555555554444432222222 33
Q ss_pred hHHHHHHH----HHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccH
Q 011657 369 AVAVVALL----LYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGI 436 (480)
Q Consensus 369 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~ 436 (480)
+....... +++.+.... .+...+++.|..|+++|+.+.++.....-+|.+++..+.+.+.+.+....
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s-~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~r 156 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHAS-GTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPER 156 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHh-HHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 33322222 222222222 23444899999999999999999999999999999999999988766443
No 256
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.88 E-value=0.0015 Score=58.81 Aligned_cols=44 Identities=11% Similarity=-0.030 Sum_probs=36.5
Q ss_pred ccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhh
Q 011657 389 IGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLL 432 (480)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 432 (480)
..++..+++.++...|+.+.+.|+..++|+---..+..++.|..
T Consensus 389 ~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 389 SGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 33478889999999999999999999999877777777777643
No 257
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.85 E-value=5.3e-05 Score=69.61 Aligned_cols=59 Identities=24% Similarity=0.249 Sum_probs=47.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhHHHH-HHHHHHHHHHHHHHhcCch
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRELI-LAALLYLVGALVTALAPDF 147 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~-~~~~~~~~~~~~~~~~~~~ 147 (480)
+|++....+.+--+..+...+.+++.|..+| ||||||.++ .+.++..++.++..++.++
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDi 125 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADI 125 (498)
T ss_pred cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhh
Confidence 6777777788888888888999999999999 589887766 4666777777777777655
No 258
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.81 E-value=0.035 Score=53.26 Aligned_cols=53 Identities=9% Similarity=0.049 Sum_probs=43.7
Q ss_pred ChhHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Q 011657 92 SSVEIGLITSGSLYGALIG-SILAFNIADILGRRRELILAALLYLVGALVTALA 144 (480)
Q Consensus 92 ~~~~~~~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 144 (480)
+...+.++.+...+...+. .++.+++++|++|++++-+....+....++.++.
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~v 94 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFV 94 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHH
Confidence 4468899999988887777 8999999999999999988777777766666554
No 259
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.78 E-value=0.0013 Score=57.03 Aligned_cols=85 Identities=22% Similarity=0.195 Sum_probs=70.0
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc------
Q 011657 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA------ 144 (480)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------ 144 (480)
++.-.|++++. +|.|..|...+.+.-.+|..+ +++.|.+.|++|++.++.+|.+...+|..+..++
T Consensus 21 Fs~yS~~Lk~~-------l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 21 FSAYSPQLKSR-------LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred hhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 44445666666 999999999999999999987 5889999999999999999999999998877653
Q ss_pred -CchHHHHHHHHHHHHHHhH
Q 011657 145 -PDFIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 145 -~~~~~l~~~r~l~G~g~g~ 163 (480)
.++|.+.+..++.|.+.+.
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~ 112 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCW 112 (250)
T ss_pred ccchHHHHHHHHHHcccHHH
Confidence 4677887777887777654
No 260
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.68 E-value=0.0014 Score=58.23 Aligned_cols=335 Identities=19% Similarity=0.165 Sum_probs=180.9
Q ss_pred ccCChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH----
Q 011657 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL---- 163 (480)
Q Consensus 89 ~~~~~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~---- 163 (480)
.|++..|.. =+.=...-.+.+.-.+.=.+.|-.-.|+++++-.+......++.-+.++.+.+-+.-++.|...+.
T Consensus 36 ~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAY 115 (433)
T KOG3810|consen 36 KNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAY 115 (433)
T ss_pred CCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhh
Confidence 566666543 333444556677777788899999999999988777778888888999999999999999998887
Q ss_pred -------------------------hHHhhhhhh----hhh-hhhhHHHHhchhHHHHHHHHHHhcccCchHHHHHhccc
Q 011657 164 -------------------------GGYGIGSLL----VDL-VAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMK 213 (480)
Q Consensus 164 -------------------------~g~~~g~~l----~~~-~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~ 213 (480)
.|...|+.+ ... ..++...-++...-..+..+..+++|..+|-+.-+..+
T Consensus 116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~ 195 (433)
T KOG3810|consen 116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLE 195 (433)
T ss_pred hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhccc
Confidence 344444433 322 11334444444444444555666777665433322211
Q ss_pred ccCchhhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhcccccccccHHHHhhhhhhhHHHHHHHHHHHHHhhChhHH
Q 011657 214 RKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSV 293 (480)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (480)
++.. ..+.+..+. +.+..+.... .-..-...+.+..++ +.++-..+.+....+++.-+
T Consensus 196 ~~~~-----------v~~~e~~~~----~~~~~~~l~~---~~~~l~~~l~~~y~n----p~ll~WSlWwAl~scg~~QV 253 (433)
T KOG3810|consen 196 DKIS-----------VGDLEEMNP----QASYMSYLRG---AFVLLWRDLQECYSN----PRLLKWSLWWALASCGYYQV 253 (433)
T ss_pred ccce-----------eccchhcCc----cchhhHHHHH---HHHHHHHHHHHHhcC----chhhhhHHHHHHhhchhHHH
Confidence 1000 000000000 0000000000 000000112222222 33334444555555566666
Q ss_pred HHhHHHHHHhcCC-CCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchH--HHhhhHHHHHHHHHHHHHhhccCCchhH
Q 011657 294 LYYAASILQSAGF-SAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL--LLGGVSGIVISLFLLGSYYLFLDDVPAV 370 (480)
Q Consensus 294 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (480)
.+|...+-++..- .....-|..=....+.+.++.+..|.+.-++.|..- +..+....+..++.+. .+.+-|+
T Consensus 254 ~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-----~t~~Iw~ 328 (433)
T KOG3810|consen 254 TNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-----QTQHIWV 328 (433)
T ss_pred HHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-----cccceeh
Confidence 6777776666531 011122344455666677777888887666655432 3333333333333222 2456677
Q ss_pred HHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC-----------ccHHHH
Q 011657 371 AVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG-----------AGILFY 439 (480)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g-----------~~~~~~ 439 (480)
......++...+........ .-+++....+.-|...|+..++.-+-..+-..+. .|..| +...|.
T Consensus 329 ~Ya~yvlfr~~y~l~itiA~-~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iV---vd~~g~~L~ir~Q~~~Y~~Yf~ 404 (433)
T KOG3810|consen 329 CYAGYVLFRVIYQLTITIAT-FQIARNLSSELFGLVFGINTFVALILQSILTLIV---VDDRGLGLDIRTQFVVYSSYFI 404 (433)
T ss_pred hhhhHHHHHhhHhhhhhHHH-HHHHHhhhhhhheeeeehHHHHHHHHHHhheEEE---EcccccCCCcceeEEEEeehHH
Confidence 77777777777766543333 4445555667788888888877666555554443 33222 334677
Q ss_pred HHHHHHHHHHHhcCC
Q 011657 440 AFGVIAVLSLAFIFX 454 (480)
Q Consensus 440 ~~~~~~~~~~~~~~~ 454 (480)
+.+++.+++..+.+.
T Consensus 405 v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 405 VLGVIFLIGFGIEYL 419 (433)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877665443
No 261
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.68 E-value=0.011 Score=58.30 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=52.7
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHh
Q 011657 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTAL 143 (480)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~ 143 (480)
..+.+..+..+ ++.+...+.-..+.+.-......+..+.++|-| ||-+++.++.++..+|..+..+
T Consensus 57 ~~nlv~ylt~~-------~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~ 123 (571)
T KOG1237|consen 57 VSNLVTYLTLE-------LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTL 123 (571)
T ss_pred hhHHHHHHHHH-------hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555 777778888888999888899999999999976 9999999999988888655444
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.64 E-value=0.0015 Score=52.13 Aligned_cols=110 Identities=14% Similarity=-0.043 Sum_probs=78.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccc
Q 011657 310 SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPI 389 (480)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (480)
........+......+..++.+.+.+++|.|+.+.++.+...+-...... .+.+..+....+.+.+.+..+...
T Consensus 37 ~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~------~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 37 GLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY------PNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHhhhhHHhhHhh
Confidence 33445566677777888889999999999999999988887755544321 234444555555555555555444
Q ss_pred cceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcch
Q 011657 390 GWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFS 426 (480)
Q Consensus 390 ~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~ 426 (480)
. .++.+...++.+++..++...+...+.++|..+.-
T Consensus 111 g-~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 111 G-TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred h-HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3 67888888899999999999888888777776543
No 263
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.64 E-value=0.0016 Score=62.27 Aligned_cols=121 Identities=8% Similarity=-0.016 Sum_probs=80.0
Q ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCc---------------------
Q 011657 310 SDATRVSILLGLFKLIM-TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV--------------------- 367 (480)
Q Consensus 310 ~~~~~~~~~~~~~~~~~-~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 367 (480)
+...++-+...+...+. .++-+++++|++|+++.-.........+.++++......+.
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 34555555555555544 78889999999999887766555555555555443322111
Q ss_pred ----hhHHHHHHHHHHHHHhccccc-ccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH
Q 011657 368 ----PAVAVVALLLYVGCYQLSFGP-IGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 368 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~ 430 (480)
..|....+.+..-.++....+ +.|.+++|.+..++..+-.++....+++|..+++.+..++.+
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222222333333333333 678999999999999999999999999999999998888763
No 264
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.56 E-value=1.1e-05 Score=78.86 Aligned_cols=176 Identities=14% Similarity=0.052 Sum_probs=1.2
Q ss_pred HHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHH
Q 011657 281 LVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSY 360 (480)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (480)
+..+.+...........+.+-+.+++ ++.++|++.+..-++.++..++..++.+|..|-+.+-++.++++++.+++.+=
T Consensus 10 ~~~~~q~~~~g~~~~~lttiErRF~l-~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTIERRFGL-SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence 33333444444555566777777888 99999999999999999999999999999888888888888888888877532
Q ss_pred hhccC-----------------------------------------Cch---hHHHHHHHHHHHHHhcccccccceeecc
Q 011657 361 YLFLD-----------------------------------------DVP---AVAVVALLLYVGCYQLSFGPIGWLMISE 396 (480)
Q Consensus 361 ~~~~~-----------------------------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
..... ... +..+++.-++.+.......++..+|+-|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 11100 000 1112222223333444456777899999
Q ss_pred cCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh---------------------hC-ccHHHHHHHHHHHHHHHhcCC
Q 011657 397 VFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL---------------------LG-AGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 397 ~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.++++..+...|+..+...+|-++|=.+.+..... .| |...|++.+.+.++..+..+.
T Consensus 169 nv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 169 NVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999988888776666555544321 12 333555666666666665555
Q ss_pred CCC
Q 011657 455 XXX 457 (480)
Q Consensus 455 ~~~ 457 (480)
+.+
T Consensus 249 FPk 251 (539)
T PF03137_consen 249 FPK 251 (539)
T ss_dssp ---
T ss_pred CCc
Confidence 443
No 265
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.50 E-value=0.037 Score=51.14 Aligned_cols=47 Identities=11% Similarity=0.041 Sum_probs=28.5
Q ss_pred HHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 376 LLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
....+...+-...+.+.+..+.+|++++-.+-.+...+-..|-..|.
T Consensus 350 ~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 350 MSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred HHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334444445567778999999888776665555555555544443
No 266
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.49 E-value=0.00037 Score=63.63 Aligned_cols=104 Identities=37% Similarity=0.488 Sum_probs=81.6
Q ss_pred ccccccccccccccCCCCCCCccccCCh--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Q 011657 66 YDIGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (480)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 143 (480)
++........+....+ ++.+. .+.++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++++
T Consensus 16 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T COG0477 16 LDLGLLSPALPLLLST-------LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL 88 (338)
T ss_pred HhcchHHHHHHHHHHH-------cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh
Confidence 4445555556665554 44444 58899999999999999999999999999999988888877777788888
Q ss_pred cCc--hHHHHHHHHHHHHHHhHhHHhhhhhhhhhh
Q 011657 144 APD--FIIMVVGRFVFGIGIGLGGYGIGSLLVDLV 176 (480)
Q Consensus 144 ~~~--~~~l~~~r~l~G~g~g~~g~~~g~~l~~~~ 176 (480)
..+ .+.+++.|+++|++.+...+....++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 123 (338)
T COG0477 89 APNVGLALLLILRLLQGLGGGGLLPVASALLSEWF 123 (338)
T ss_pred CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 776 899999999999999876666666555544
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.48 E-value=0.00068 Score=64.97 Aligned_cols=156 Identities=21% Similarity=0.200 Sum_probs=94.5
Q ss_pred HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhc-----CchHHHhhhHHHHHHHHHHHHHhhccCCchhHHH
Q 011657 298 ASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG-----RRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 372 (480)
Q Consensus 298 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (480)
+.+.++.|. ++.+.........+.. ...++.|.++|-+. ||+-++++.++..++...+..... ...+.....
T Consensus 14 ~~l~~~l~l-s~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~ 90 (433)
T PF03092_consen 14 PFLKDDLGL-SPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA-SESSAAIAV 90 (433)
T ss_pred HHHHHHcCC-CHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc-ccchhhhHH
Confidence 444566787 6666555544444333 35577889999862 444455566655555554443211 111222222
Q ss_pred HHHHHHHHHHhcccccccceeecccC---ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHH
Q 011657 373 VALLLYVGCYQLSFGPIGWLMISEVF---PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 449 (480)
+.+++...+... .-...-++..|.. |.+ ++...+.+..+..+|+.++..+.|.+.+..+++..|.+.+.+..+..
T Consensus 91 ~~l~la~~g~a~-~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 91 VLLFLASFGYAF-ADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHH-HHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 222222222221 1223345555654 544 88888999999999999999999999999999999988887777766
Q ss_pred HhcCCCCCC
Q 011657 450 AFIFXXXXX 458 (480)
Q Consensus 450 ~~~~~~~~~ 458 (480)
+..+.+.+|
T Consensus 169 ~~~~~~~~e 177 (433)
T PF03092_consen 169 IVALFLLEE 177 (433)
T ss_pred HHHHHhhhh
Confidence 665555565
No 268
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.47 E-value=0.001 Score=65.90 Aligned_cols=185 Identities=14% Similarity=0.057 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHH
Q 011657 274 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 353 (480)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 353 (480)
.++..+.+..+.+......+......+-+.+++ +..+.|++....-++..+...+..++..|..|-+.+-++.++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i-~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKI-SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC-CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 334444444444444444555556666667788 8888999999999999999999999999999989999999999988
Q ss_pred HHHHHHHhhc-----------------c---------------------------CCc--hhHHHHHHHHHHHHHhcccc
Q 011657 354 LFLLGSYYLF-----------------L---------------------------DDV--PAVAVVALLLYVGCYQLSFG 387 (480)
Q Consensus 354 ~~~~~~~~~~-----------------~---------------------------~~~--~~~~~~~~~~~~~~~~~~~~ 387 (480)
.+++.+--.. . ..+ .+..+++.-++.+.+.....
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 8887542111 0 001 12223333344444555556
Q ss_pred cccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh------------------hC-ccHHHHHHHHHHHHH
Q 011657 388 PIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL------------------LG-AGILFYAFGVIAVLS 448 (480)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~------------------~g-~~~~~~~~~~~~~~~ 448 (480)
++..+|+-|...+++.....|+.+++..+|-++|=.+.+..... .| |...|++.+.+.++.
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 77788999999999999999999988887766666655544321 11 334666777777777
Q ss_pred HHhcCCCCCCC
Q 011657 449 LAFIFXXXXXX 459 (480)
Q Consensus 449 ~~~~~~~~~~~ 459 (480)
.+..+++.++.
T Consensus 336 a~p~f~fPk~l 346 (735)
T KOG3626|consen 336 AVPLFFFPKEL 346 (735)
T ss_pred HHHHHhCcccC
Confidence 77766654443
No 269
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.05 E-value=0.0044 Score=43.23 Aligned_cols=67 Identities=19% Similarity=0.059 Sum_probs=58.8
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHH
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGS 359 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 359 (480)
.+.-.+|.+.++.++ +..+++++.+...++.++|.+...++.++..+++.+..+.+...+..+.+.+
T Consensus 10 ayTplLP~M~~~~~l-s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 10 AYTPLLPLMQADGGL-SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHhHhHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 445578888899888 9999999999999999999999999999888888888888888888887765
No 270
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.0027 Score=54.85 Aligned_cols=48 Identities=23% Similarity=0.119 Sum_probs=42.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 136 (480)
||+|+...+.+.+....-.++.+++.|.++||+|++-..+.+..+..+
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTL 342 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHH
Confidence 999999999999999999999999999999999999887776554443
No 271
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.00 E-value=0.018 Score=52.25 Aligned_cols=149 Identities=20% Similarity=0.135 Sum_probs=92.0
Q ss_pred HHHHhHHHHHHhcCCCCC--cchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh
Q 011657 292 SVLYYAASILQSAGFSAA--SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA 369 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (480)
......+.+..+.+. +. ...++......+...++.++.|.+.||.|||+.+..+......+.+..... .....
T Consensus 20 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 94 (338)
T COG0477 20 LLSPALPLLLSTLSL-SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA----PNVGL 94 (338)
T ss_pred hHHHHHHHHHHHcCC-CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC----ccchH
Confidence 333455555555554 33 367888888899999999999999999999977776665533433333221 11122
Q ss_pred HHHHHHHHHHHHHhcccccccceeecccCCh-hhhhhHHHHHHH-HHHHHHHhHhhcchhhHHh--hCccHHHHHHHHHH
Q 011657 370 VAVVALLLYVGCYQLSFGPIGWLMISEVFPL-RLRGRGLSVAVL-VNFGANALVTFAFSPLKDL--LGAGILFYAFGVIA 445 (480)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~-~~~~g~~i~~~~~~~~~~~--~g~~~~~~~~~~~~ 445 (480)
..+.......+.......+...++..|..|. +.|+...+.... ...++..+++.+.+.+... .+|+..+.......
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 2222222223333334456666888999887 578888888888 5777777777666655544 45655444444433
No 272
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.91 E-value=0.0017 Score=61.36 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=96.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH-----
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL----- 163 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~----- 163 (480)
.+-.+...|........+-++.-++.+++.+|+|+-+++.+++.+..+=.+..+..+|.|+.+..-+++|+..+.
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 565666777777788888888999999999999999999999999999999999999999999999999998887
Q ss_pred ------------------------------hHHhhhhhhhhhhhhhHHHHhchhHHHHHHHHHHhcc
Q 011657 164 ------------------------------GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 200 (480)
Q Consensus 164 ------------------------------~g~~~g~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 200 (480)
+|.++|+.+.... +=|..|.+.++.+++.++....+
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888888876 88999999988888765554443
No 273
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.75 E-value=0.087 Score=49.93 Aligned_cols=42 Identities=10% Similarity=-0.102 Sum_probs=32.3
Q ss_pred ccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH
Q 011657 389 IGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~ 430 (480)
...++-+.+.+|..-|+.+.+.|++.++|+---..+.-+++|
T Consensus 425 ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 425 AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 334777888888999999999999999997655555444544
No 274
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.75 E-value=0.042 Score=51.25 Aligned_cols=153 Identities=12% Similarity=0.073 Sum_probs=89.5
Q ss_pred HHhHHHHHHh-cCCCCCcchHH-HHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHH
Q 011657 294 LYYAASILQS-AGFSAASDATR-VSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 371 (480)
Q Consensus 294 ~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (480)
.+..|++.+. .++ +..+..- +.-...-..++..++...+.|.++.|++++++.+...+...++.+ ......
T Consensus 24 Pfl~~yL~~~~kn~-T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~------~~sv~~ 96 (412)
T PF01770_consen 24 PFLTPYLTGPDKNF-TEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF------GTSVLA 96 (412)
T ss_pred ccchHHHcCCccCC-CHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH------HCcHHH
Confidence 3444555554 566 5555443 333333444556667788999999999999888877776666543 233333
Q ss_pred HHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC--ccHHHHHHHHHHHHHH
Q 011657 372 VVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG--AGILFYAFGVIAVLSL 449 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~ 449 (480)
+-..-++.+.....- ...++++-...|+++--++.+.......+|..++..++-.+....+ +....++..+...++.
T Consensus 97 mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 97 MQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 333333333333322 2334666667788877888888888888887777777766665333 3334344333333444
Q ss_pred HhcCC
Q 011657 450 AFIFX 454 (480)
Q Consensus 450 ~~~~~ 454 (480)
++.++
T Consensus 176 ~~~~f 180 (412)
T PF01770_consen 176 LIALF 180 (412)
T ss_pred HHHHH
Confidence 44333
No 275
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.57 E-value=0.015 Score=54.76 Aligned_cols=115 Identities=10% Similarity=-0.062 Sum_probs=77.7
Q ss_pred hHHHhhhHHHHHHHHHHHHHhhccCC----chhHHHHHHHHHHHHHhcccccccceeecccCChh---hhhhHHHHHHHH
Q 011657 341 PLLLGGVSGIVISLFLLGSYYLFLDD----VPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLR---LRGRGLSVAVLV 413 (480)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~ 413 (480)
+++.++.++..++.+++.+....... .....++.+.+ ...+.++.=|....+..|.++++ .|.......+..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~l-ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLAL-IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHH-HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHH-HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 45667778888888775543222111 11233333333 34444455566668888888765 567777888999
Q ss_pred HHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhcCCCC
Q 011657 414 NFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 414 ~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
.++|..++..+.+++.++.||...|.+.++..+++.+..+.-.
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998888887777665543
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.53 E-value=0.086 Score=50.04 Aligned_cols=160 Identities=11% Similarity=-0.021 Sum_probs=90.2
Q ss_pred HHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHH----HHHHHHHHHhhccCC-
Q 011657 292 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIV----ISLFLLGSYYLFLDD- 366 (480)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~- 366 (480)
...+-.+.++.+..-.+-.-.+.....-.+..++..+..|...||..|.+....+.+..- +++.++.........
T Consensus 20 ~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~ 99 (432)
T PF06963_consen 20 MWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSS 99 (432)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 334444555554432144456666777778888888889999999999877655543332 222222222222221
Q ss_pred --chhHHHH---HHHHHHHHHhcccccccceeecc------cC--ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhC
Q 011657 367 --VPAVAVV---ALLLYVGCYQLSFGPIGWLMISE------VF--PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLG 433 (480)
Q Consensus 367 --~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~--p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g 433 (480)
+.+.... ...++......+. .......| +. +++.....++...-+=.+...++|.+.|.+.+..+
T Consensus 100 ~~~~~~~~~l~~~~~~~~~i~~Las--~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s 177 (432)
T PF06963_consen 100 SQSSWLFIALFALLILLGAIERLAS--IANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFAS 177 (432)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHH--hhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 1222211 1112222111111 11122221 22 34555666666666667789999999999999888
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 011657 434 AGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~ 453 (480)
+.....+.++..+++..+=+
T Consensus 178 ~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 178 PVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888888888777766543
No 277
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.27 E-value=0.014 Score=51.17 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhH
Q 011657 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 96 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 163 (480)
.|.+.-.-.+...+..+.+..+.||+---+-..+..++.+.+.++.++++|.++-+.+-.+..++.|.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGl 131 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGL 131 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCc
Confidence 45555555566667777777888887544434566777888888999999999999998888888887
No 278
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.13 E-value=0.089 Score=50.85 Aligned_cols=109 Identities=12% Similarity=-0.016 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC-----Cc--------------------hhHHHHHHH
Q 011657 322 FKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-----DV--------------------PAVAVVALL 376 (480)
Q Consensus 322 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------------------~~~~~~~~~ 376 (480)
+.++...+-.++++++++.++.-.........+.++++..+... +. ..|...++.
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 33445566778999999988776655555555555554332211 00 011111112
Q ss_pred HHH-HHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH
Q 011657 377 LYV-GCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 377 ~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~ 430 (480)
+.. ...+....-+-|.+++|....++..+-.++.....++|.++++.+...+.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 222222223557899999999999999999999999999999998888777
No 279
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.95 E-value=0.14 Score=44.15 Aligned_cols=24 Identities=13% Similarity=0.184 Sum_probs=17.4
Q ss_pred hhhHHHHhchhHHHHHHHHHHhcc
Q 011657 177 AGWRYMYGASTPLAVIMGMGMWWL 200 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~~~~~~~~~ 200 (480)
..|++++.+.+++.++.++++..+
T Consensus 38 ~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 38 NNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 379999999988887755544443
No 280
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.87 E-value=0.24 Score=49.06 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=103.0
Q ss_pred HHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh-hcCchHHHhhhHHHHHHHHHHHHHhhccC------
Q 011657 293 VLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLFLD------ 365 (480)
Q Consensus 293 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 365 (480)
......++....+. +...+.-.............+.+++++|. +||-+++.++..+..++..++.+......
T Consensus 57 ~~nlv~ylt~~~~~-~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 57 VSNLVTYLTLELHA-SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred hhHHHHHHHHHhcc-chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 34455555566666 44666666677777777788899999996 48888888888887777666544322210
Q ss_pred ----C-------chh--HHHHHHHHHHHHHhcccccccceeecccCCh----hh--hhhHHHHHHHHHHHHHHhHhhcch
Q 011657 366 ----D-------VPA--VAVVALLLYVGCYQLSFGPIGWLMISEVFPL----RL--RGRGLSVAVLVNFGANALVTFAFS 426 (480)
Q Consensus 366 ----~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~--~~~~~~~~~~~~~~g~~i~~~~~~ 426 (480)
. ... ..+...........++.-|...++-.|.++. +. +..-+...+...++|..++..+..
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 0 011 1111112222223444456666788888872 22 235667777778899999888888
Q ss_pred hhHHhhCccHHHHHHHHHHHHHHHhcC
Q 011657 427 PLKDLLGAGILFYAFGVIAVLSLAFIF 453 (480)
Q Consensus 427 ~~~~~~g~~~~~~~~~~~~~~~~~~~~ 453 (480)
++-++.+|...|.+..++.+++.++.+
T Consensus 216 yiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 216 YIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhhhcccceeeccHHHHHHHHHHHHHH
Confidence 888889999888887777666655543
No 281
>PRK03612 spermidine synthase; Provisional
Probab=95.85 E-value=0.094 Score=51.50 Aligned_cols=142 Identities=13% Similarity=0.088 Sum_probs=69.5
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHH---HHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 011657 304 AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIV---ISLFLLGSYYLFLDDVPAVAVVALLLYVG 380 (480)
Q Consensus 304 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (480)
.|. +....+.+.+.+..+..+|+.+++++.++.-++... .-..+.. ++..++...... ............+..+
T Consensus 45 ~G~-s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 45 LGD-SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAF-QGLSRLLLYVLVLLIG 121 (521)
T ss_pred hCc-hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 454 566667777777778888888777765332222211 1111111 111111111100 0011111122222222
Q ss_pred HHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHH-hhCccHHHHHHHHHHHHHH
Q 011657 381 CYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD-LLGAGILFYAFGVIAVLSL 449 (480)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 449 (480)
+..+...|+...+..+. ..+..+...|-.+....+|+++|+.+.+.+.- ..|.....++.+.+.++.+
T Consensus 122 ~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33333344442332222 11234667888888999999999998887664 5776555555555544444
No 282
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.77 E-value=0.42 Score=38.26 Aligned_cols=82 Identities=20% Similarity=0.146 Sum_probs=63.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhHhHHhhhhh
Q 011657 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLGGYGIGSL 171 (480)
Q Consensus 92 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~g~~~g~~ 171 (480)
++..--.-.++......+.+++.+.+.+++|.|+.+++|.+.+.+-... -+-++.+.++.+-.+.|++.+.+-..-|.+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 3333344556666777888888999999999999999999999865444 456788899999999999999966666666
Q ss_pred hhh
Q 011657 172 LVD 174 (480)
Q Consensus 172 l~~ 174 (480)
+..
T Consensus 114 lt~ 116 (156)
T PF05978_consen 114 LTS 116 (156)
T ss_pred HHH
Confidence 653
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.66 E-value=0.0024 Score=58.22 Aligned_cols=109 Identities=14% Similarity=-0.090 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-cCchHHHhhhHHHHHHHHHHHHHhhcc--------CCchhHHHHHHHHHHHHHhc
Q 011657 314 RVSILLGLFKLIMTGLAVLVVERL-GRRPLLLGGVSGIVISLFLLGSYYLFL--------DDVPAVAVVALLLYVGCYQL 384 (480)
Q Consensus 314 ~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 384 (480)
.....+.++-.+|+.+..+..-+. .+|++. ...+.=.+...++......+ -.+.++ .....+..+...+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~-~~i~~~l~g~TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAW-FIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHH-HHHHHHHHHHccc
Confidence 356678889999999887653221 233333 22222222222221111110 112222 2333333344444
Q ss_pred ccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhc
Q 011657 385 SFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFA 424 (480)
Q Consensus 385 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 424 (480)
-...+.+.+..+..++++|..+..+...+-.+|-.+|..+
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---HHHH---------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677888888888888888777777766676666544
No 284
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.015 Score=54.00 Aligned_cols=151 Identities=22% Similarity=0.148 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hcCchHHH-hhh
Q 011657 273 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER----LGRRPLLL-GGV 347 (480)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~-~~~ 347 (480)
+.++....+.+..++++ ..-..|.+.++++.|. +....+......-+.+++.+++.|..+|| +||||..+ .+.
T Consensus 32 ~~li~v~~ia~Gvqf~w-A~elsy~tPyl~~lGv-phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s 109 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGW-ALELSYLTPYLQSLGV-PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhccccHHHHHcCC-CcccccccccccccccceecccccccccccccccccccchHHHhh
Confidence 33444444444445443 3555678888999999 88888888888889999999999999996 68776654 455
Q ss_pred HHHHHHHHHHHHHhhc------cCCc--hhHHH----HHHHHHHHHHhcccccccceeecccCChhhhhh-HHHHHHHHH
Q 011657 348 SGIVISLFLLGSYYLF------LDDV--PAVAV----VALLLYVGCYQLSFGPIGWLMISEVFPLRLRGR-GLSVAVLVN 414 (480)
Q Consensus 348 ~~~~~~~~~~~~~~~~------~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~ 414 (480)
....+++++++..... .... ....+ +.+.++-........|.= ++..|+..++.+.+ +++....+.
T Consensus 110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r-a~L~Dl~~~d~~~~~Ans~f~~f~ 188 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR-ALLADLARGDAKKTRANSVFSFFM 188 (498)
T ss_pred HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH-HHHHHhccChhhhhccchhHHHHH
Confidence 5556666655432111 0111 01111 112222223333444554 78888887777777 899998888
Q ss_pred HHHHHhHhhcch
Q 011657 415 FGANALVTFAFS 426 (480)
Q Consensus 415 ~~g~~i~~~~~~ 426 (480)
.+|+.+|=.+.+
T Consensus 189 avGnvLGY~~g~ 200 (498)
T KOG0637|consen 189 AVGNVLGYALGS 200 (498)
T ss_pred Hhcceeeeeccc
Confidence 888876665544
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.80 E-value=0.033 Score=47.91 Aligned_cols=156 Identities=15% Similarity=0.085 Sum_probs=82.9
Q ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchh-HHHHHHHH
Q 011657 299 SILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA-VAVVALLL 377 (480)
Q Consensus 299 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 377 (480)
++.+.+|+ ...+.+.+........++...+.|-+.||.|||+..+.-++...++++.= .+..+ ..++.-.+
T Consensus 62 yLYstYgF-gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK-------hSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 62 YLYSTYGF-GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK-------HSPQYKVLMVGRVL 133 (454)
T ss_pred eeehhcCc-cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh-------cCCceEEEeehhhh
Confidence 34566777 67788888877777788888889999999999998776666666555531 11111 11111111
Q ss_pred HHHHHhcccccccceeecccC-----ChhhhhhHHHHHH-HHHHHHHHhHhhcchhhHHhhC--ccHHHHHHHHHHHHHH
Q 011657 378 YVGCYQLSFGPIGWLMISEVF-----PLRLRGRGLSVAV-LVNFGANALVTFAFSPLKDLLG--AGILFYAFGVIAVLSL 449 (480)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~-~~~~~g~~i~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~ 449 (480)
.+......+...-.=++.|.. |.+-.....+=.. ..+.+-.++.......+.|..+ .-.+|-..+.+..++.
T Consensus 134 GGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm 213 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM 213 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence 111111111111111334433 3333333333222 2234555666666667777654 4456665555555555
Q ss_pred HhcCCCCCCCCCC
Q 011657 450 AFIFXXXXXXXXS 462 (480)
Q Consensus 450 ~~~~~~~~~~~~~ 462 (480)
.+.+.-..|..++
T Consensus 214 Avil~~W~ENygd 226 (454)
T KOG4332|consen 214 AVILSSWSENYGD 226 (454)
T ss_pred HHHHhhhhhccCC
Confidence 5544444454444
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.76 E-value=1.9 Score=40.62 Aligned_cols=75 Identities=20% Similarity=0.384 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHhc---Cch------HHHHHHHHHHHHHHhH--------------------------------
Q 011657 125 RELILAALLYLVGALVTALA---PDF------IIMVVGRFVFGIGIGL-------------------------------- 163 (480)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~---~~~------~~l~~~r~l~G~g~g~-------------------------------- 163 (480)
|++.++.+++.+|.++..++ .+. ..++++-.+.++|.|+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888884433 222 6788899999999998
Q ss_pred -hHHhhhhhhhh---hhhhhHHHHhchhHHHHHHHHHHhc
Q 011657 164 -GGYGIGSLLVD---LVAGWRYMYGASTPLAVIMGMGMWW 199 (480)
Q Consensus 164 -~g~~~g~~l~~---~~~~wr~~f~~~~~~~~~~~~~~~~ 199 (480)
+|..++..+.. ...+|.+.|.+.++..++.++.++.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 45544443332 2248999999998887776555544
No 287
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.67 E-value=1.2 Score=42.57 Aligned_cols=107 Identities=11% Similarity=-0.059 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccc
Q 011657 312 ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGW 391 (480)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
......+......+..++++.+.|+++.|+.+.++..+.......+.. .+.+..+....+.+.+.+..+..-.
T Consensus 52 Gy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~------~N~y~~yfssallG~Gaallw~GqG- 124 (461)
T KOG3098|consen 52 GYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF------PNSYYLYFSSALLGFGAALLWTGQG- 124 (461)
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh------cchHHHHHHHHHhhhhHHheecccc-
Confidence 334478888888999999999999999999999998888776665543 3566666666666666666555444
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF 425 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~ 425 (480)
.+..|...++.+.+..++...+...+.++|..+.
T Consensus 125 ~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 125 GYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred eehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 7899999999999999999999888777775443
No 288
>PRK03612 spermidine synthase; Provisional
Probab=93.89 E-value=2.1 Score=42.27 Aligned_cols=36 Identities=11% Similarity=0.094 Sum_probs=30.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 124 (480)
+|-+..+.+.+.++++.|.++|+.+++++.++--|+
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~ 80 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG 80 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 677889999999999999999999999987544333
No 289
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.85 E-value=6.4 Score=37.74 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=44.6
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Q 011657 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (480)
Q Consensus 92 ~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 144 (480)
++..+.++-+...+ +..+..++.+++.+++.|.+++-+-+..+....+++++.
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~V 112 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFV 112 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678888888888 778889999999999999999988888888777777763
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.76 E-value=7.2 Score=38.04 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Q 011657 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (480)
Q Consensus 92 ~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 143 (480)
++..+.++-....+ ...+...+..+++++++|.+++-+....+.....+.++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~ 108 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAF 108 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777776555 44556788999999999999988777777666666655
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.42 E-value=2 Score=41.02 Aligned_cols=123 Identities=14% Similarity=-0.025 Sum_probs=78.3
Q ss_pred CcchHHHHHHHHH-HHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccC-----C----------ch----
Q 011657 309 ASDATRVSILLGL-FKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-----D----------VP---- 368 (480)
Q Consensus 309 ~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----------~~---- 368 (480)
++....+=+..-+ ++++..++-.++.+++.+.++.-.........++++++..+... + .+
T Consensus 60 ae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~ 139 (509)
T COG3202 60 AESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLK 139 (509)
T ss_pred chhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccce
Confidence 4444444444444 56667777788888888888776666666666666655444210 0 11
Q ss_pred --------hHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh
Q 011657 369 --------AVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 431 (480)
Q Consensus 369 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 431 (480)
|.........-........-+-|..++|....++..+-.++.+...+++..+++.+..++..+
T Consensus 140 ~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 140 WFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222222222222222223335568889999999999999999999999999999888877763
No 292
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.89 E-value=0.82 Score=42.85 Aligned_cols=132 Identities=17% Similarity=0.134 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccce
Q 011657 313 TRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWL 392 (480)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (480)
+.+...-.+-.++..+++.++.+|+..+.-......+..+++++.++ ..+.+.-++...+.....+ ++-+.+.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~-----~~~v~~~l~Gv~las~ssg--~GE~tfL 134 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAF-----SPSVWVRLLGVVLASLSSG--LGEVTFL 134 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheee-----ccchhHHHHHHHHHhhhhh--hhHHHHH
Confidence 44666666777888888999999987544444445556666665543 2333333333333333322 2223222
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCc--cHHHHHHHHHHHHHHHhcCCCC
Q 011657 393 MISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGA--GILFYAFGVIAVLSLAFIFXXX 456 (480)
Q Consensus 393 ~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 456 (480)
-....+|+. +.+........++.+|+.....+.+ .|. +..+.++..+.++..+..++.+
T Consensus 135 ~lt~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 135 SLTHFYGKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred HHHHhcCcc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334455532 3344444445566667766654444 443 4466666655544444333333
No 293
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.19 E-value=4.2 Score=38.10 Aligned_cols=52 Identities=8% Similarity=-0.208 Sum_probs=25.6
Q ss_pred HHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 011657 283 LFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER 336 (480)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 336 (480)
.......++.+.+-.+++.+..-..+. +........+...+..++.-.+--+
T Consensus 27 GiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~ 78 (406)
T KOG1479|consen 27 GIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAF 78 (406)
T ss_pred hcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344455666666666665544232 4444444455544444444444333
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=91.99 E-value=0.47 Score=43.26 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=26.4
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
-..+|..|++.|....|+.|..+..-..+--.
T Consensus 409 qimQe~VpEseR~vv~gvqnsL~~~ldll~~i 440 (503)
T KOG2601|consen 409 QIMQETVPESERCVVFGVQNSLNSALDLLKDI 440 (503)
T ss_pred HHHHHhcchhhhhhhHhHHHHHHHHHHHHHHh
Confidence 57789999999999999999998877654443
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.51 E-value=2.5 Score=38.98 Aligned_cols=147 Identities=14% Similarity=0.004 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh-----hhcCchHHHh-hhH
Q 011657 275 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE-----RLGRRPLLLG-GVS 348 (480)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~g~~~~~~~-~~~ 348 (480)
+++..+++ ..+....+... ..|.+++..+. |-.+.+....... -.---++...+.| |+|||+..++ +..
T Consensus 33 illLl~LY-llQGiP~GL~~-~iP~lL~ak~v-Syt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 33 ILLLLFLY-LLQGIPLGLIG-AIPLLLQAKGV-SYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred HHHHHHHH-HHcCCchhHhh-hhHHHhcCCCc-chhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 33333443 33444444444 78888887666 4444433322211 1112234455556 9999876443 333
Q ss_pred HHHHHHHHHHHHhhcc-----CCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhh
Q 011657 349 GIVISLFLLGSYYLFL-----DDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTF 423 (480)
Q Consensus 349 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~ 423 (480)
+....+..++...... ..++.......++...+.....-...-.+...+..+++.|-+..........|.+++..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 4444444433211100 01111221111111112222222222344555566677777766666667777777766
Q ss_pred cch
Q 011657 424 AFS 426 (480)
Q Consensus 424 ~~~ 426 (480)
++-
T Consensus 188 ifL 190 (510)
T KOG3574|consen 188 VFL 190 (510)
T ss_pred eee
Confidence 543
No 296
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=89.13 E-value=17 Score=33.01 Aligned_cols=68 Identities=21% Similarity=0.339 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhHhHHhhhhhhh
Q 011657 105 YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLGGYGIGSLLV 173 (480)
Q Consensus 105 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~g~~~g~~l~ 173 (480)
+..+..+++.+.+.+++|.|.++.++...+... +..=+-+.+..++..-...|+|.+.++..-|.++.
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceec
Confidence 444555566668999999999999888777653 22334567889999999999999985555555554
No 297
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=88.21 E-value=3.5 Score=39.58 Aligned_cols=34 Identities=9% Similarity=-0.064 Sum_probs=20.4
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhhcc
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTFAF 425 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~ 425 (480)
.++-.+..+++++-|........++|.+++-.++
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 4445556667777666655555666666655444
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=83.81 E-value=29 Score=30.39 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011657 125 RELILAALLYLVGALVTA 142 (480)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~ 142 (480)
+.-++|-.+++.+.++.-
T Consensus 56 p~amlgG~lW~~gN~~~v 73 (254)
T PF07857_consen 56 PWAMLGGALWATGNILVV 73 (254)
T ss_pred eHHHhhhhhhhcCceeeh
Confidence 344555566666555443
No 299
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=83.69 E-value=12 Score=36.16 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC
Q 011657 318 LLGLFKLIMTGLAVLVVERLGR 339 (480)
Q Consensus 318 ~~~~~~~~~~~~~g~l~d~~g~ 339 (480)
...+..++..+....+..|+..
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~ 74 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPV 74 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCc
Confidence 3444444444555555566554
No 300
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=83.59 E-value=29 Score=30.12 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHH
Q 011657 320 GLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 353 (480)
Q Consensus 320 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 353 (480)
.++..+..+.+-.++.|+..|++.+.+.+++.+.
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 3444444455557788999888877766655443
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.02 E-value=5.4 Score=28.95 Aligned_cols=41 Identities=12% Similarity=0.002 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHH
Q 011657 95 EIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYL 135 (480)
Q Consensus 95 ~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~ 135 (480)
+.+.-.+.=+++..+.....||+.||| |.++..++..++.+
T Consensus 43 ~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 43 AQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 344556666777777788889999997 66665554444433
No 302
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=81.28 E-value=9.3 Score=35.31 Aligned_cols=47 Identities=9% Similarity=-0.014 Sum_probs=30.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHH
Q 011657 401 RLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVL 447 (480)
Q Consensus 401 ~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 447 (480)
.......+....+-.....+.|.+.|.+....+.+..-.++++-.++
T Consensus 171 s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 171 SVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred HHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 33333445555566677889999999998877766644444444433
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=76.55 E-value=56 Score=32.46 Aligned_cols=71 Identities=14% Similarity=0.102 Sum_probs=36.5
Q ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHhhChhHHHHhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011657 262 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL 337 (480)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 337 (480)
--.|+||.|.... ++..++....+.. .......++...|..++..-+.+.....+..++.+.++|+.+-|+
T Consensus 250 vhgDVFR~P~~~~-lls~lvG~G~Qll----~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 250 VHGDVFRPPKHPM-LLSALVGTGIQLL----FMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred hhHHHhcCcCCch-HHHhHhcchhhhh----HHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3457888776433 3333333333332 222233334445554565555565555566666666666666553
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.40 E-value=4.1 Score=29.51 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=29.6
Q ss_pred ChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCcc
Q 011657 399 PLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAG 435 (480)
Q Consensus 399 p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~ 435 (480)
.++.++.+.++-...-.+++.+.....|++.|++-..
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3466788888888888889999999999999986533
No 305
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=72.28 E-value=1.6e+02 Score=32.43 Aligned_cols=27 Identities=15% Similarity=0.521 Sum_probs=16.9
Q ss_pred hhhhhhhhhhHHHHhchhHHHHHHHHH
Q 011657 170 SLLVDLVAGWRYMYGASTPLAVIMGMG 196 (480)
Q Consensus 170 ~~l~~~~~~wr~~f~~~~~~~~~~~~~ 196 (480)
+++.....+||....+.+...++.+..
T Consensus 799 ~iiiaf~~~W~lalv~la~~Pll~~~~ 825 (1228)
T KOG0055|consen 799 GIIIAFIYGWRLALVVLATFPLLILSG 825 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334449999988877776654433
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=69.86 E-value=13 Score=29.50 Aligned_cols=31 Identities=13% Similarity=0.059 Sum_probs=23.4
Q ss_pred ccceeecccCChhhhhhHHHHHHHHHHHHHH
Q 011657 389 IGWLMISEVFPLRLRGRGLSVAVLVNFGANA 419 (480)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 419 (480)
+.|...+....++..|+..|+-.+-.+++..
T Consensus 114 isYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 114 ISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 4456666777778899999998888777654
No 307
>COG3619 Predicted membrane protein [Function unknown]
Probab=68.01 E-value=79 Score=27.19 Aligned_cols=110 Identities=18% Similarity=0.257 Sum_probs=54.3
Q ss_pred hHHhHHHHhhhhhcccccccccccccccccCCCCCCC-ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hHH
Q 011657 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGI-SWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR--RRE 126 (480)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr--r~~ 126 (480)
..+..++...+.+.+.+.....+-.....+..+.-.- -.+.-.+...........+..++|......+..|..| ...
T Consensus 10 l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~ 89 (226)
T COG3619 10 LRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPV 89 (226)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 4455566677777777765333332222221100000 0011134556667777788888886666666666554 222
Q ss_pred H-HHHHHHHHHHHHHHHhc----CchHHHHHHHHHHHH
Q 011657 127 L-ILAALLYLVGALVTALA----PDFIIMVVGRFVFGI 159 (480)
Q Consensus 127 ~-~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~ 159 (480)
. ..+.++.....+..++. ++....+..-|..|+
T Consensus 90 l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~ 127 (226)
T COG3619 90 LLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGI 127 (226)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 2 23333333334444443 355555555566664
No 308
>PRK11469 hypothetical protein; Provisional
Probab=66.90 E-value=43 Score=27.90 Aligned_cols=50 Identities=14% Similarity=0.191 Sum_probs=30.9
Q ss_pred cCChhHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 011657 90 DLSSVEIGLITSGSLYGALIGS-ILAFNIADILGRRRELILAALLYLVGAL 139 (480)
Q Consensus 90 ~~~~~~~~~~~s~~~~~~~~~~-~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 139 (480)
+.+............+...... .++.++.+++|+|.-++-|.++..+|.-
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445455555444444444 4555567778888888888888777754
No 309
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=65.37 E-value=97 Score=28.71 Aligned_cols=119 Identities=13% Similarity=-0.006 Sum_probs=50.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhhhcC-chH---HHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHh
Q 011657 308 AASDATRVSILLGLFKLIMTGLAVLVVERLGR-RPL---LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQ 383 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (480)
...+.+.+...+.....+|+.+.-++.|.--. |-+ ++.+.+. .++...+.+.+........+.+.......+...
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllglig-g~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIG-GVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhc-cchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 44566666666666666666655554443211 111 1112111 111111111122222333444444444444444
Q ss_pred cccccccceeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhH
Q 011657 384 LSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLK 429 (480)
Q Consensus 384 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~ 429 (480)
+.-.|+.+.+..... .......+.....-++|+..+..+.+++.
T Consensus 120 G~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 120 GAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred hcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 444566655555411 11222223333346667666666655443
No 310
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=63.28 E-value=1e+02 Score=28.40 Aligned_cols=28 Identities=4% Similarity=-0.076 Sum_probs=12.4
Q ss_pred cchhhHHhhCccHHHHHHHHHHHHHHHh
Q 011657 424 AFSPLKDLLGAGILFYAFGVIAVLSLAF 451 (480)
Q Consensus 424 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 451 (480)
+.+....+....+.+++..++.+++.++
T Consensus 275 i~~i~~f~~~~~~ly~~af~lIiiG~vv 302 (334)
T PF06027_consen 275 IIDIFFFGYKFSWLYILAFALIIIGFVV 302 (334)
T ss_pred HHHHHhcCccccHHHHHHHHHHHHHhhe
Confidence 3333333344455555444444444444
No 311
>PRK10263 DNA translocase FtsK; Provisional
Probab=59.56 E-value=61 Score=35.67 Aligned_cols=21 Identities=19% Similarity=-0.018 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhc
Q 011657 318 LLGLFKLIMTGLAVLVVERLG 338 (480)
Q Consensus 318 ~~~~~~~~~~~~~g~l~d~~g 338 (480)
+.+.++.+|..+...+..-+|
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccccchHHHHHHHHHHHHHh
Confidence 345666666666666665566
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=54.75 E-value=76 Score=29.35 Aligned_cols=75 Identities=27% Similarity=0.314 Sum_probs=48.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-----HHHHHhc----CchHHHHHHHHHHHH
Q 011657 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG-----ALVTALA----PDFIIMVVGRFVFGI 159 (480)
Q Consensus 89 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~-----~~~~~~~----~~~~~l~~~r~l~G~ 159 (480)
.|-+..|.+.+.+.|...+.+|+...-++.|.--.-+.+..-.++..++ .+-..|+ ++-+.+++.-++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 4557788999999999999999999998888544332222222221111 1112333 456777888888888
Q ss_pred HHhH
Q 011657 160 GIGL 163 (480)
Q Consensus 160 g~g~ 163 (480)
-.|.
T Consensus 118 LVG~ 121 (508)
T COG4262 118 LVGA 121 (508)
T ss_pred HHhc
Confidence 7776
No 313
>PTZ00101 rhomboid-1 protease; Provisional
Probab=49.42 E-value=2e+02 Score=25.83 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHH
Q 011657 104 LYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTA 142 (480)
Q Consensus 104 ~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~ 142 (480)
.+.........|...+| +|+++..++-.+....|+++.+
T Consensus 118 Ll~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~ 157 (278)
T PTZ00101 118 TFFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSS 157 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 35555666677777775 7988877555555455554443
No 314
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.12 E-value=1.4e+02 Score=24.68 Aligned_cols=24 Identities=29% Similarity=0.416 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhh
Q 011657 100 TSGSLYGALIGSILAFNIADILGR 123 (480)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Gr 123 (480)
+.-|.+++.++..+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456789999999999999999885
No 315
>COG4769 Predicted membrane protein [Function unknown]
Probab=45.79 E-value=24 Score=28.11 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 011657 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFG 158 (480)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 158 (480)
+.+..++.+...-++..++|+|..-.+|.-. ..++.+|..++++.+++.|
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~ 131 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVF 131 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHh
Confidence 4445555666667778889988875555433 3467899999999998875
No 316
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=45.69 E-value=2.5e+02 Score=26.00 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH---HHHHHHHHHhcCchHHHHHHHHHHHHHHhH
Q 011657 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL---YLVGALVTALAPDFIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 95 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 163 (480)
.+|.......++.. -.++.+++.+++|--+.+..+.++ ++--.+...+++|.......-.+.|--.|.
T Consensus 48 m~GI~~laP~la~~-l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~ 118 (354)
T PF04346_consen 48 MAGIMALAPVLAAF-LSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGA 118 (354)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcc
Confidence 34444444444433 445668888899988888887666 344566777888888887777777766665
No 317
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=44.98 E-value=1.3e+02 Score=22.61 Aligned_cols=78 Identities=18% Similarity=0.126 Sum_probs=37.0
Q ss_pred CChhHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC-c--hHHHHHHHHHHHHHHhHhHH
Q 011657 91 LSSVEIGLI-TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP-D--FIIMVVGRFVFGIGIGLGGY 166 (480)
Q Consensus 91 ~~~~~~~~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-~--~~~l~~~r~l~G~g~g~~g~ 166 (480)
+++....+. ...+.++..++....|+-.++-|--.-+..+.+-+.+..++..+.. + ...-...|++..+..|.+|.
T Consensus 34 ~~e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~~~~~~~~~~~~~~~~~~~~~~~G~lGG 113 (116)
T PF12670_consen 34 LSESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISFLFGPGPFSGSSQLLKLLLCLLAGALGG 113 (116)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHh
Confidence 344444333 2333444444444444444433333334444444444444444432 1 23556677777777776655
Q ss_pred hh
Q 011657 167 GI 168 (480)
Q Consensus 167 ~~ 168 (480)
.+
T Consensus 114 ~l 115 (116)
T PF12670_consen 114 ML 115 (116)
T ss_pred hc
Confidence 44
No 318
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=44.87 E-value=1.9e+02 Score=24.43 Aligned_cols=63 Identities=22% Similarity=0.298 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHH---hhhhhhHHHHHHH----HHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHhH
Q 011657 101 SGSLYGALIGSILAFNIA---DILGRRRELILAA----LLYLVGALVTALAPD----FIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 101 s~~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~----~~~~~~~~~~~~~~~----~~~l~~~r~l~G~g~g~ 163 (480)
.....++.+|..+.+.+. ++..+|+.....+ ++..+..++....++ +......-+.+|+=.+.
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~~~lafamg~Qn~~ 126 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLIAALLPPAFPPHGHRILAIFLLAFAMGMQNAA 126 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 444455566666666662 2333333333333 333333333333344 44555555555554444
No 319
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=43.78 E-value=1.3e+02 Score=26.65 Aligned_cols=34 Identities=12% Similarity=-0.018 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHH
Q 011657 95 EIGLITSGSLYGALIGSILAFNIADIL-GRRRELI 128 (480)
Q Consensus 95 ~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~ 128 (480)
......-++..|+.+|....|++...- -||+.+.
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 345556667777778888888888754 4554433
No 320
>PRK10263 DNA translocase FtsK; Provisional
Probab=42.05 E-value=5.1e+02 Score=29.13 Aligned_cols=16 Identities=25% Similarity=0.225 Sum_probs=9.0
Q ss_pred HhHhHHhhhhhhhhhh
Q 011657 161 IGLGGYGIGSLLVDLV 176 (480)
Q Consensus 161 ~g~~g~~~g~~l~~~~ 176 (480)
.|.+|..++.++....
T Consensus 143 GGIIG~lLs~lL~~Lf 158 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLL 158 (1355)
T ss_pred cchHHHHHHHHHHHHH
Confidence 3446666666655544
No 321
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=41.54 E-value=91 Score=22.03 Aligned_cols=43 Identities=16% Similarity=0.040 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhhhh-------hHHHHHHHHHHHHHHHHHHhcCch
Q 011657 105 YGALIGSILAFNIADILGR-------RRELILAALLYLVGALVTALAPDF 147 (480)
Q Consensus 105 ~~~~~~~~~~g~l~dr~Gr-------r~~~~~~~~~~~~~~~~~~~~~~~ 147 (480)
.+.....+.++++.+|.-+ ++.+.++.++...+.++++..+|.
T Consensus 29 a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 29 AGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 4455566777788887665 788888888888888888876654
No 322
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=40.73 E-value=1.1e+02 Score=28.52 Aligned_cols=93 Identities=11% Similarity=-0.004 Sum_probs=51.3
Q ss_pred HHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccceeecccCChhhhhhHHHHH
Q 011657 331 VLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVA 410 (480)
Q Consensus 331 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 410 (480)
-.+.|...-|++++.-.+.......++.+ ....+. +-.+=++.+..... -...++++-+..++++.-++.|-+
T Consensus 63 FlLTD~lrYKPvivlq~ls~v~~w~~lv~-----g~sV~~-mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~ 135 (433)
T KOG3810|consen 63 FLLTDYLRYKPVVVLQALSGVPVWIMLVF-----GPSVKA-MQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTGYC 135 (433)
T ss_pred HHHhhhhhcceeeeeeccchhHHHHHHHh-----cCCchh-eeeehhhcChHHHH-HHhhhheeeeecCHHHHHHHHHHh
Confidence 35678777777766544333333333222 222222 11111222222211 123447788888999999999988
Q ss_pred HHHHHHHHHhHhhcchhhHH
Q 011657 411 VLVNFGANALVTFAFSPLKD 430 (480)
Q Consensus 411 ~~~~~~g~~i~~~~~~~~~~ 430 (480)
....-.|-..+..+...+..
T Consensus 136 RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 136 RAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred HHHHHHHhHHHhHHHHHHhh
Confidence 88877777777666665554
No 323
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.72 E-value=57 Score=23.92 Aligned_cols=52 Identities=21% Similarity=0.167 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC
Q 011657 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (480)
Q Consensus 94 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 145 (480)
...|=+.+.|.-.+.+.++.+++..|+.-+-+-=.+|..+..+|..+..+.|
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 3345678888889999999999999999887777788777777776665543
No 324
>PF14241 DUF4341: Domain of unknown function (DUF4341)
Probab=39.85 E-value=1.1e+02 Score=20.03 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=16.1
Q ss_pred Hhhhhhhhh--hhhhhHHHHhchhHHHHH
Q 011657 166 YGIGSLLVD--LVAGWRYMYGASTPLAVI 192 (480)
Q Consensus 166 ~~~g~~l~~--~~~~wr~~f~~~~~~~~~ 192 (480)
..+.+.+.. ...+||+.|.+..+++..
T Consensus 31 Gil~~~~~~~~~~~~W~~~fl~Gl~~g~~ 59 (62)
T PF14241_consen 31 GILSGLLSPNKPDRDWRLAFLAGLILGGF 59 (62)
T ss_pred HHHHHHhCCCCCCccHHHHHHHHHHHHHH
Confidence 334444433 334899999887766543
No 325
>PRK02237 hypothetical protein; Provisional
Probab=37.82 E-value=99 Score=22.82 Aligned_cols=51 Identities=25% Similarity=0.214 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcC
Q 011657 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (480)
Q Consensus 95 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 145 (480)
..|=+.+.|.-.+++.++.+++..|+.-+-+-=.+|..+..+|..+..+.+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 366688889999999999999999998877777777777777776655543
No 326
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=36.94 E-value=3.3e+02 Score=28.39 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=36.2
Q ss_pred HHHHHHHh---h-hhhhHHHHHHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHhH
Q 011657 112 ILAFNIAD---I-LGRRRELILAALLYLVGALVTALAPDF-IIMVVGRFVFGIGIGL 163 (480)
Q Consensus 112 ~~~g~l~d---r-~Grr~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~g~g~ 163 (480)
.+.+-+.| + -||.+-++++.+++.++++...+...+ +.+..+-++.+++.+.
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 34445566 3 377888999999999999988876554 4555566666666665
No 327
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=35.85 E-value=2.9e+02 Score=23.86 Aligned_cols=33 Identities=9% Similarity=-0.017 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 323 KLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 323 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
..+.-.+.|++.-|++.++....+.-...++.+
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~~~~l~~~~~G~~ 212 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWIISGIIMLINGAA 212 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 556666777887787766655444433333333
No 328
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=35.78 E-value=2.3e+02 Score=23.20 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=15.6
Q ss_pred CChhhhhhHHHHHHHHHHHHHHhHh
Q 011657 398 FPLRLRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 398 ~p~~~~~~~~~~~~~~~~~g~~i~~ 422 (480)
-|.+....++++.-.+..+..++..
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti~~~ 134 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITIIVN 134 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHHHHH
Confidence 4556677778877776665544433
No 329
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=35.77 E-value=2.5e+02 Score=27.01 Aligned_cols=32 Identities=19% Similarity=0.080 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 324 LIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 324 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
+.-.+++-++.+.+.++++..+-.++.+++++
T Consensus 305 I~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~ 336 (430)
T PF06123_consen 305 IGLTFLAFFLFELLSKLRIHPIQYLLVGLALV 336 (430)
T ss_pred HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHH
Confidence 33444445666766666654443333333333
No 330
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=35.40 E-value=1.3e+02 Score=23.90 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhH
Q 011657 100 TSGSLYGALIGSILAFNIADILGRRR 125 (480)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Grr~ 125 (480)
+.-|.+|+.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45678899999999999999988764
No 331
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=35.21 E-value=4.1e+02 Score=27.71 Aligned_cols=51 Identities=20% Similarity=0.305 Sum_probs=35.5
Q ss_pred HHHHHHh---h-hhhhHHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHhH
Q 011657 113 LAFNIAD---I-LGRRRELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGL 163 (480)
Q Consensus 113 ~~g~l~d---r-~Grr~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~g~g~ 163 (480)
+.+-++| + -||.+-+.++.+++.++++...+... .+.+..+-++.+++.+.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3455666 2 47778888999999988888877544 45555666666666665
No 332
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=34.60 E-value=1.1e+02 Score=22.45 Aligned_cols=48 Identities=13% Similarity=0.038 Sum_probs=37.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHH
Q 011657 309 ASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 356 (480)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 356 (480)
+...+-.+..++-..++.+++.++..|+..+.+.=.++..++.++..+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 367788899999999999999999999987666555555555555443
No 333
>PRK11715 inner membrane protein; Provisional
Probab=34.17 E-value=2.7e+02 Score=26.88 Aligned_cols=32 Identities=16% Similarity=0.062 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 324 LIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 324 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
+.-.+.+-++.+...++++..+-..+.++++.
T Consensus 311 I~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~ 342 (436)
T PRK11715 311 IALTFAAFFLFELLKKLRIHPVQYLLVGLALV 342 (436)
T ss_pred HHHHHHHHHHHHHhcCceecHHHHHHHHHHHH
Confidence 33444455667777766654443333333333
No 334
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=34.17 E-value=3.6e+02 Score=24.48 Aligned_cols=65 Identities=18% Similarity=0.047 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhHhHHhhhhhhhhhhhhhHHHHhchhHHHHH
Q 011657 126 ELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLGGYGIGSLLVDLVAGWRYMYGASTPLAVI 192 (480)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~g~~~g~~l~~~~~~wr~~f~~~~~~~~~ 192 (480)
++.+|.+.+.++.+-++=..-+.-.=.+-++.|+..|.++.....++-....+| .-+..++++.+
T Consensus 123 ~l~lG~l~~~~g~~YTgGp~PlgY~gLGEi~~~vffG~l~v~g~~yiqt~~~~~--~~ll~slp~gi 187 (303)
T COG1575 123 VLLLGLLCIAAGILYTGGPFPLGYMGLGEIFVGVFFGPLIVLGAYYIQTGRLSW--AILLPSLPVGI 187 (303)
T ss_pred HHHHHHHHHHheeeeccCCcCcccCCHHHHHHHHHHHHHHHHHHHHHhcccchH--HHHHHHHHHHH
Confidence 566666666665554443344455556677778888866665555554443344 44444444444
No 335
>COG1971 Predicted membrane protein [Function unknown]
Probab=33.15 E-value=2.9e+02 Score=23.03 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 011657 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV 140 (480)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~ 140 (480)
...+-..+|..++.++...+|.|.-++-+.++..++.-.
T Consensus 145 ~T~il~~~G~~IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 145 ITLILSALGAIIGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 334444555566666666777788888888877776543
No 336
>PRK11588 hypothetical protein; Provisional
Probab=31.88 E-value=5.2e+02 Score=25.61 Aligned_cols=36 Identities=11% Similarity=0.192 Sum_probs=22.8
Q ss_pred HHHHhhhhhhH--HHHHHHHHHHHHHHHHHhcCchHHH
Q 011657 115 FNIADILGRRR--ELILAALLYLVGALVTALAPDFIIM 150 (480)
Q Consensus 115 g~l~dr~Grr~--~~~~~~~~~~~~~~~~~~~~~~~~l 150 (480)
+++.+|++.|. ++.+.+++++++....+++.....+
T Consensus 137 ~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f 174 (506)
T PRK11588 137 LALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAF 174 (506)
T ss_pred HHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 67778887663 3445666777777666776654333
No 337
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.67 E-value=1.6e+02 Score=29.03 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=29.4
Q ss_pred HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011657 298 ASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL 337 (480)
Q Consensus 298 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 337 (480)
..++.-.|+.++..-|-+.+...+..++..+++|+.+-|+
T Consensus 347 ti~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 347 TIFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HHHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3445666777888877777777777777778888877764
No 338
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=31.35 E-value=35 Score=25.21 Aligned_cols=38 Identities=8% Similarity=-0.009 Sum_probs=25.6
Q ss_pred hhhHHhhCccHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q 011657 426 SPLKDLLGAGILFYAFGVIAVLSLAFIFXXXXXXXXSF 463 (480)
Q Consensus 426 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (480)
|...|..+|...+++...++++.+.+.+.+.|++.-++
T Consensus 51 G~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~ 88 (105)
T PF10183_consen 51 GEKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQT 88 (105)
T ss_pred CCcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 45566778888888766666666666666678776543
No 339
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.06 E-value=2.2e+02 Score=20.80 Aligned_cols=12 Identities=0% Similarity=-0.277 Sum_probs=5.1
Q ss_pred HHHhhhcCchHH
Q 011657 332 LVVERLGRRPLL 343 (480)
Q Consensus 332 ~l~d~~g~~~~~ 343 (480)
|+=.+++..+..
T Consensus 65 WLD~~~~t~~~~ 76 (100)
T TIGR02230 65 WLDRHYPSPFSW 76 (100)
T ss_pred HHHhhcCCCcHH
Confidence 333345544433
No 340
>PRK02237 hypothetical protein; Provisional
Probab=29.86 E-value=1.8e+02 Score=21.55 Aligned_cols=47 Identities=15% Similarity=0.038 Sum_probs=36.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHH
Q 011657 310 SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 356 (480)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 356 (480)
...+-.+..++-..++.+++.++..|+...-+.=.++..++.++..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHH
Confidence 45788899999999999999999999987665555555555555443
No 341
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=29.80 E-value=2.6e+02 Score=21.53 Aligned_cols=8 Identities=13% Similarity=0.065 Sum_probs=4.6
Q ss_pred eeecccCC
Q 011657 392 LMISEVFP 399 (480)
Q Consensus 392 ~~~~~~~p 399 (480)
++..|...
T Consensus 82 Tf~~E~~~ 89 (128)
T PRK14212 82 TFSYETLD 89 (128)
T ss_pred HHHHHHHH
Confidence 56666553
No 342
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=29.15 E-value=1.5e+02 Score=18.56 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHH
Q 011657 101 SGSLYGALIGSILAFNIADI-LGRRRELILAALLYLV 136 (480)
Q Consensus 101 s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~ 136 (480)
........+.....|+..|+ +|.++...+..++.++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 44555666677777888875 5776665554444443
No 343
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=29.07 E-value=3.6e+02 Score=22.84 Aligned_cols=59 Identities=19% Similarity=0.246 Sum_probs=28.6
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHhhCccH-HHHHHHHHHHHHHHhc
Q 011657 393 MISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDLLGAGI-LFYAFGVIAVLSLAFI 452 (480)
Q Consensus 393 ~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~ 452 (480)
+..+.-+ +.|-+..--......+...+....+..+.+.+|... .|-+.+++.+....+-
T Consensus 27 lt~~~~~-~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ 86 (203)
T PF01914_consen 27 LTKGMSP-KERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALE 86 (203)
T ss_pred HhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 3344333 444333333333333333444445556667777554 5666666655554443
No 344
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=27.94 E-value=20 Score=31.32 Aligned_cols=12 Identities=8% Similarity=0.244 Sum_probs=0.0
Q ss_pred HHhcCCCCCCCC
Q 011657 449 LAFIFXXXXXXX 460 (480)
Q Consensus 449 ~~~~~~~~~~~~ 460 (480)
++++|++..+.+
T Consensus 178 aiLIWlY~H~~~ 189 (381)
T PF05297_consen 178 AILIWLYVHDQR 189 (381)
T ss_dssp ------------
T ss_pred HHHHHHHhcCCC
Confidence 334455555444
No 345
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.50 E-value=1.5e+02 Score=21.17 Aligned_cols=41 Identities=17% Similarity=0.232 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 409 VAVLVNFGANALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 409 ~~~~~~~~g~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
+...+-.+++ +..++.|...+.+++. ++.+ ++-+++.+++.
T Consensus 27 ~~q~ilti~a-iVg~i~Gf~~Qqls~t-vy~v-g~~~v~t~li~ 67 (101)
T KOG4112|consen 27 FQQLILTIGA-IVGFIYGFAQQQLSVT-VYIV-GAGFVFTLLIT 67 (101)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHhc
Confidence 3444444443 3445677777777753 3333 33344444443
No 346
>KOG4753 consensus Predicted membrane protein [Function unknown]
Probab=26.66 E-value=1.2e+02 Score=22.75 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=7.5
Q ss_pred chhhhHHhHHHHhhhhhccc
Q 011657 46 SVSAAILPFLFPALGGLLYG 65 (480)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~ 65 (480)
+++...+.+.+..++.++.+
T Consensus 47 P~k~i~lavvL~~fg~Lli~ 66 (124)
T KOG4753|consen 47 PVKEIALAVVLLVFGLLLIG 66 (124)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 347
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=26.59 E-value=4e+02 Score=22.60 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=23.6
Q ss_pred cCChhHHHHHHHHHHHHHHH-HHHHHHHHHhh--hhhhHHHHHHHHHHHHH
Q 011657 90 DLSSVEIGLITSGSLYGALI-GSILAFNIADI--LGRRRELILAALLYLVG 137 (480)
Q Consensus 90 ~~~~~~~~~~~s~~~~~~~~-~~~~~g~l~dr--~Grr~~~~~~~~~~~~~ 137 (480)
|.+.........+..+.... |..++.++.++ .|++. ++-|.++..+|
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 44444444444444433333 33344445555 36665 66677766665
No 348
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=26.54 E-value=90 Score=23.52 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=15.9
Q ss_pred CcccchhhhHHhHHHHhhhhhccc
Q 011657 42 PENYSVSAAILPFLFPALGGLLYG 65 (480)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~ 65 (480)
+.+.+||...++++++.+|.++..
T Consensus 36 ~~k~pwK~I~la~~Lli~G~~li~ 59 (115)
T PF05915_consen 36 KVKIPWKSIALAVFLLIFGTVLII 59 (115)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345578888888777766665433
No 349
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=26.03 E-value=96 Score=21.27 Aligned_cols=32 Identities=25% Similarity=0.540 Sum_probs=17.9
Q ss_pred HhHhhcchhhHHhhCccHHHHHHHHHHHHHHHhc
Q 011657 419 ALVTFAFSPLKDLLGAGILFYAFGVIAVLSLAFI 452 (480)
Q Consensus 419 ~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 452 (480)
++.+++.|++.+... ..+++.++..++++++.
T Consensus 21 ~iisfi~Gy~~q~~~--~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 21 AIISFIVGYITQSFS--YTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhe
Confidence 445566777777554 45555555555554443
No 350
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=25.98 E-value=1.2e+02 Score=26.75 Aligned_cols=46 Identities=22% Similarity=0.355 Sum_probs=34.2
Q ss_pred HhHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHH---------HHhhhcCch
Q 011657 295 YYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVL---------VVERLGRRP 341 (480)
Q Consensus 295 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~---------l~d~~g~~~ 341 (480)
+|.-.++++.|. ++.....+.....+...+..++.|. -.||+|||.
T Consensus 38 TYlllfltqigl-sp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 38 TYLLLFLTQIGL-SPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred HHHHHHHHHhcC-CcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 345556778888 7777778888888888888887763 457899874
No 351
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.63 E-value=2.7e+02 Score=20.36 Aligned_cols=34 Identities=15% Similarity=-0.095 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHH
Q 011657 103 SLYGALIGSILAFNIADI-LGRRRELILAALLYLV 136 (480)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~ 136 (480)
..+...+.+...|...|+ ||-++.+.+.+++.++
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 344555556666777774 6766655555444444
No 352
>PRK10692 hypothetical protein; Provisional
Probab=25.44 E-value=2.5e+02 Score=19.77 Aligned_cols=19 Identities=26% Similarity=0.450 Sum_probs=10.4
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 011657 123 RRRELILAALLYLVGALVT 141 (480)
Q Consensus 123 rr~~~~~~~~~~~~~~~~~ 141 (480)
||....+|-+++++|.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 4555556666665555443
No 353
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=24.95 E-value=1.5e+02 Score=27.92 Aligned_cols=19 Identities=16% Similarity=0.384 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 011657 320 GLFKLIMTGLAVLVVERLG 338 (480)
Q Consensus 320 ~~~~~~~~~~~g~l~d~~g 338 (480)
.+..++..+..|++..|.+
T Consensus 5 ~i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 5 AILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 3444555556666666653
No 354
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=24.93 E-value=71 Score=29.05 Aligned_cols=135 Identities=15% Similarity=0.123 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHhcccccccc
Q 011657 312 ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQLSFGPIGW 391 (480)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (480)
.+.+...-.+-.++-.+....+.||+.-..-..+...+.+.++++.++ .++.+..+....+ ...+.+++-+.+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVaf-----s~s~~~sL~GV~~--aSissGlGEiTF 136 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAF-----SNSVPMSLLGVVF--ASISSGLGEITF 136 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEe-----ccchhHHHhhhhh--hhhcCCcceeeh
Confidence 455555666666777777888888865332233333444555554432 2223333332222 233334444444
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHhHhhcchhhHHh--hCccHHHHHHHHHHHHHHHhcCCCCC
Q 011657 392 LMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL--LGAGILFYAFGVIAVLSLAFIFXXXX 457 (480)
Q Consensus 392 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 457 (480)
.-.+..+|+...+ ++.. ....++.+|..-...+.+. ...+...+++..+-++-++..++.++
T Consensus 137 L~lss~Y~~~~i~---~WSS-GTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 137 LALSSRYPSIVIA---GWSS-GTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred hhhhccCCCceec---cccC-CCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 4444555533221 2211 1222334444443334332 34555666666665544444444443
No 355
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=24.77 E-value=4.6e+02 Score=25.86 Aligned_cols=16 Identities=31% Similarity=0.505 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHhH
Q 011657 148 IIMVVGRFVFGIGIGL 163 (480)
Q Consensus 148 ~~l~~~r~l~G~g~g~ 163 (480)
+...+..|+||.|.|.
T Consensus 257 ~~~v~L~flqg~gtgs 272 (790)
T KOG0056|consen 257 FLYVFLKFLQGGGTGS 272 (790)
T ss_pred HHHHHHHHHhcCCccc
Confidence 4455678999988776
No 356
>COG2119 Predicted membrane protein [Function unknown]
Probab=24.67 E-value=4.1e+02 Score=22.05 Aligned_cols=99 Identities=21% Similarity=0.134 Sum_probs=0.0
Q ss_pred ccccCCCCCCcccchhhhHHhHHHHhhhhhcccccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHH
Q 011657 33 LIANGIRPSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSI 112 (480)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 112 (480)
+..+++++.....++......++...++-+.+-.....+.-... .+....-.-=......+...++-+
T Consensus 85 edk~~~~e~~~~~~~~~f~~tfi~~FlaE~GDKTQiATIaLaA~------------~~~~~~V~~Gt~lg~~l~s~laVl 152 (190)
T COG2119 85 EDKEDDEEAQAASPRGVFVTTFITFFLAELGDKTQIATIALAAD------------YHSPWAVFAGTTLGMILASVLAVL 152 (190)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHhccHHHHHHHHHhhc------------CCCceeeehhhHHHHHHHHHHHHH
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Q 011657 113 LAFNIADILGRRRELILAALLYLVGALVTAL 143 (480)
Q Consensus 113 ~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 143 (480)
.+.++++|+..|++-.++.+++.+..+....
T Consensus 153 ~G~~ia~ki~~r~l~~~aallFl~fal~~~~ 183 (190)
T COG2119 153 LGKLIAGKLPERLLRFIAALLFLIFALVLLW 183 (190)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
No 357
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=24.25 E-value=1.2e+02 Score=16.17 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=4.6
Q ss_pred HHHHHhcccCchH
Q 011657 193 MGMGMWWLPASPR 205 (480)
Q Consensus 193 ~~~~~~~~~e~p~ 205 (480)
.+....+++|+||
T Consensus 16 ilffAI~FRePPr 28 (29)
T PF01405_consen 16 ILFFAIFFREPPR 28 (29)
T ss_dssp HHHHHHHSS----
T ss_pred HHHhhhhccCCCC
Confidence 3334445678775
No 358
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=23.27 E-value=1.5e+02 Score=27.58 Aligned_cols=93 Identities=11% Similarity=0.029 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhHhHHhhhhhhh----
Q 011657 98 LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLGGYGIGSLLV---- 173 (480)
Q Consensus 98 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~g~~~g~~l~---- 173 (480)
++.|...+...+.+.+.+ .||+.-.|++.+.+-+.++-.+-..=+..-.-....|.+.|--.+.++..+=+...
T Consensus 190 ilSStSs~FtL~la~if~--~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk 267 (416)
T KOG2765|consen 190 ILSSTSSFFTLFLAAIFP--VERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLK 267 (416)
T ss_pred hhhhcchHHHHHHHHHcC--cchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333444444 89999998876555444433222222222234455666666555543333322221
Q ss_pred ----hh--hhhhHHHHhchhHHHHH
Q 011657 174 ----DL--VAGWRYMYGASTPLAVI 192 (480)
Q Consensus 174 ----~~--~~~wr~~f~~~~~~~~~ 192 (480)
+. -.+-+..|...+++.++
T Consensus 268 ~~~~~eg~rvdi~lffGfvGLfnll 292 (416)
T KOG2765|consen 268 RKIGDEGERVDIQLFFGFVGLFNLL 292 (416)
T ss_pred hhcccccccccHHHHHHHHHHHHHH
Confidence 11 12456666666666555
No 359
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=22.63 E-value=5e+02 Score=22.31 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCchHHHhhhHHHHHHHH
Q 011657 319 LGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 355 (480)
Q Consensus 319 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 355 (480)
..+...+.-.+.|.+.-|+++++...-+.=...++.+
T Consensus 170 s~~~~~~aL~~~G~~~a~~~~~~~~~~~l~~~~iG~~ 206 (218)
T cd02432 170 TIIATLLALALTGYVSARLGGASVLRAILRNVIWGAL 206 (218)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 3344566667778888888776655444333333333
No 360
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.32 E-value=1.9e+02 Score=25.46 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=9.6
Q ss_pred hhhhHHHHHHHHHHHHHHhHh
Q 011657 402 LRGRGLSVAVLVNFGANALVT 422 (480)
Q Consensus 402 ~~~~~~~~~~~~~~~g~~i~~ 422 (480)
.|..++|+...+.+....+..
T Consensus 76 i~~iGLglg~liW~s~n~l~G 96 (254)
T PF07857_consen 76 IKTIGLGLGMLIWGSVNCLTG 96 (254)
T ss_pred hhhhhhHHHHHHHHHHHHHHH
Confidence 344445555555444444333
No 361
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=22.26 E-value=1.1e+02 Score=22.69 Aligned_cols=28 Identities=14% Similarity=0.317 Sum_probs=20.5
Q ss_pred hhhHHHHhchhHHHHH-HHHHHhcccCch
Q 011657 177 AGWRYMYGASTPLAVI-MGMGMWWLPASP 204 (480)
Q Consensus 177 ~~wr~~f~~~~~~~~~-~~~~~~~~~e~p 204 (480)
.+|+.+|++...++++ ..+.+.+.||+.
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3899999988777766 555566678763
No 362
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=21.84 E-value=1.9e+02 Score=26.78 Aligned_cols=44 Identities=25% Similarity=0.261 Sum_probs=37.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 011657 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (480)
Q Consensus 91 ~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 134 (480)
+.-.+++..+.++.++.++.+.+.|.|..++||-+.+..+.+.-
T Consensus 307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~ 350 (390)
T KOG3097|consen 307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVH 350 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHH
Confidence 34578899999999999999999999999999998888765543
No 363
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=21.50 E-value=2.9e+02 Score=19.27 Aligned_cols=18 Identities=28% Similarity=0.571 Sum_probs=9.7
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 011657 123 RRRELILAALLYLVGALV 140 (480)
Q Consensus 123 rr~~~~~~~~~~~~~~~~ 140 (480)
||....+|-+++++|.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 455555555555555443
No 364
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=20.54 E-value=69 Score=22.00 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=11.4
Q ss_pred hCccHHHHHHHHHHHHHHHhcCC
Q 011657 432 LGAGILFYAFGVIAVLSLAFIFX 454 (480)
Q Consensus 432 ~g~~~~~~~~~~~~~~~~~~~~~ 454 (480)
.|...+|.++.++.++..++..+
T Consensus 10 ~Gm~iVF~~L~lL~~~i~l~~~~ 32 (79)
T PF04277_consen 10 IGMGIVFLVLILLILVISLMSKL 32 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555554444433
No 365
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=20.36 E-value=4.2e+02 Score=20.56 Aligned_cols=7 Identities=14% Similarity=0.102 Sum_probs=3.7
Q ss_pred eeecccC
Q 011657 392 LMISEVF 398 (480)
Q Consensus 392 ~~~~~~~ 398 (480)
++..|.+
T Consensus 81 Tf~~E~~ 87 (132)
T PRK14219 81 TFSVETI 87 (132)
T ss_pred HHHHHHH
Confidence 5555554
Done!